NO17G00430, NO17G00430 (gene) Nannochloropsis oceanica

Overview
NameNO17G00430
Unique NameNO17G00430
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3070
Alignment locationchr17:158558..161627 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:158558..161627 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO17G00430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL158nonsL158Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR035ncniR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR084ngnoR084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK004759NSK004759Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G00430.1NO17G00430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|170534gene_7843Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G00430.1NO17G00430.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G00430 ID=NO17G00430|Name=NO17G00430|organism=Nannochloropsis oceanica|type=gene|length=3070bp
CGTGGCACTCCTACGGGAGGCTTCGTCTGTCTGTCTTTTCATAGGAGTGG
TCAAGCAATCACGATTTCAGTCGATCGCCCTCTGCCTGGTAATTACGAGC
AGTTCCGGCGGCGACGGACAGCAAAAAGGCCTGCAAGCCCCACCTGCTTA
CTCAGCCCGAATGACGGGGCGCGACCAAACGATACGACAGGACTTCGTAG
AGGGGGATGCCTCGGAGGAGTGGCGGTCGAAATTGCAGGGCGGCGCGATA
GTAGAAATTCAGgtaaaaagatgaaggggggggagggggtgggaggaagt
gacggaaatcgtgcgacgtggtggctccagggttgctacttttgctcaac
caccctcctggtcatatttgtgaatgcctacatgataatttagccaaggg
aagggacttgtagagggaggaggacatgtgggagggaggaatcggactta
tggcgtcattatatatggcatcatgcactcactactgccaacccccaacc
cccataaataaactccacgcccacagGTGGACGGTGTGTGGCGCCACGGA
AGGGTATCAATGCGGTACGATAGGAGGTGGTTCAATGCCATTGTCTATAT
TGTAGACACGTTGGCAAGACGGCTACTGATCTCTTACTTAGgtacgtgtg
atggcagggagggaggggaggtcctacagagggagttacgtcgagttggg
attgcagaaatgcagagagagaaaggggggctgagggccatggcggaaag
ggatatggaagacagaggcttctggtaggggtacatggggaggggtggga
gtaagacgtacacactcgcgctgtccagacgcatgcacgctcatcgaaga
acccatcaagaaagctagttaccgtcaccgagagacagttcggaaaacat
tcaggcacactcagccccccccctcccccccccccctactctctctcccc
tccctctttctctttccctctcacccttccttccgcccttgcagGCTGGC
CCAAAGCCCCCCCCAACCAACGCTATGGTAACTTAGCCGAAGAATGGATT
TCCTTTGATAGCCTCCGTCTCCGCCGCCTTCCCCCACATTCCTCCTCATC
CTCCTGCTCCTCCTCCTCTTCATCCTCCTCCGCTTCCTGCTCCTCCACCT
CCTTCCTAACGACCTGGACTGTCGGGGAACGAGTCCAAGTGCTCATAGAT
CAGCGCGAGCATGAGTATAGGTGGGGCTATTGGCGATTTCATGGGGGTTA
CGCTCGAGGGGTAAAGGGAGAGGAAGATATCTCCCCCTCGTCTGACGCGG
CAACGTTACTTATCGAAGTTTTGCCCTGGCCCTCGGAGGAGGAGGGCGGG
GAGGGCGGGGAAGAAGGGAGGAAAGAAGGGAGGAAGGAAGGGGTGGTGGC
GGCATTGTTGAAAGGAAGCGCAGGGGAGTGGTCCTCCACAGCAGCAACAG
CGGGCACCGAGGGCAGTAGCAGCAGTACTAGCAGCAGTTGCAGTGGCATC
AGCCCAGGGAAGGGTGCTTTTGCCCCTCTTCCTCCAAAATCATCACCCTC
ACAATCGGCATTCCAAAACGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CCTCCACCACCACCACCTGTCCCTCCTTCCTCCATGCCGCAACACTCCTG
TCCCGCTCCTCCCCTCTTCGACCCATTCCACTCACAAGCAACATCATCAT
CGACGGCAGCGCCAGCCCTACCAAGCTATCGCCATCCTCCTCCCCCTCTT
CCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCC
TCCTCGTCATCCTCCTCCTCCCTCTCTCCAGCCCTCTCTCCCGCCCTCTC
TCCATCCTCTTCCTATTCCTCAAGCGCACCTACTTTTATTTGCATTCATC
TTTGGAGTAGATCTCTCGCCGCGGGAGGGACACACATGCTCCCTTATCCT
GCTCCCTCTCTCCCTCCCTTCCCTCCTACATTTTATTACAGCAACTCCTC
CCTCACCAGCGCACCTACCTCTTCCTCCTCCACATCGTCCCTCCCCCTCC
CTCCATTGCTGTCTCCTATGTCCAGCAGTGAATCAACTCACTTCTCCTCC
TCCGGCGCCGGTGGTCCGTCCTCCCCTCCCTCCCTCCCGTCCTCCCCTCC
TCCACCACACGCCCACGTGCCCTTGATGACTGTGGGCTGAACCCAATAGC
GCGCTGGTCGTGCGTCGAAAGAGGGAGGGACGAAGGGAGGGAGGGAGGGA
CTCTACGCCACTTAATCCCTGTGGTTTCGCAAAGGATTTGGGAAGTGTTT
GGAAGAGAAGGAGCGAGGTAGCGAAAAGGGAAGACGCGACCCTCTAACAA
TTCATCCAACGTAGGAGACGGGAGGATTAAGCACCCACTCGTCCGCCCCT
TTGCCTGCCTCCCTCCCTCCTTCGAAACTTTTAGTGTACATATAGACGCA
CAGAGCATGCCATATCATTATTATTATACGTCCTACAATGAATCAAACGT
TAGGAAGAAACACACAAAAAAGACTTCCCTTCTGCAGGAAGGAGGGAGGG
AAAGGTTTGAACGTGCGAATGAGTACAAAAGAAGGCACGATGTTAGACTG
GAAGAAATTCAACCAGTCCACGATAAAAGCGACAAGGAGAGGAAGAAGGG
AGGTGTCCAAGGAAACGCTGGAGAGCTCGGTATCGTGCGTGTCTACATGT
GTGCGTGCGTGAGTGCGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTATAT
GTGTGTATATGTGTGTATGTGTGTCAGAGCGAGAGAGTGTATAATCAATT
CATATATATATGTTATATTATAAATATACATAATAATTCATAATAGTCCA
GATCCATCCACACGAAATTTAGCCAGCTATTCCCCTCCCCTCCCGCCTCC
CACTTCCTTTCCCTTTTCCTAATGCAACGGCGATCAGTGCTGCGTGAAGA
CTTAGGAGGAGGATACCTTAGGTCAAGGACGGCCCAAACCAGCTGGAGAA
ATTGGCCAGGAGACAAAACAGAGAATACGAATGTGCACACCTCCCTACAT
TAAAGAATTATACGCATGGC
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protein sequence of NO17G00430.1

>NO17G00430.1-protein ID=NO17G00430.1-protein|Name=NO17G00430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=471bp
MTGRDQTIRQDFVEGDASEEWRSKLQGGAIVEIQVDGVWRHGRVSMRYDR
RWFNAIVYIVDTLARRLLISYLGWPKAPPNQRYGNLAEEWISFDSLRLRR
LPPHSSSSSCSSSSSSSSASCSSTSFLTTWTVGERVQVLIDQREHEYRWG
YWRFHGGYARGVKGEEDISPSSDAATLLIEVLPWPSEEEGGEGGEEGRKE
GRKEGVVAALLKGSAGEWSSTAATAGTEGSSSSTSSSCSGISPGKGAFAP
LPPKSSPSQSAFQNASSSSSSSSSSSTTTTCPSFLHAATLLSRSSPLRPI
PLTSNIIIDGSASPTKLSPSSSPSSSSSSSSSSSSSSSSSSSSSSSSSLS
PALSPALSPSSSYSSSAPTFICIHLWSRSLAAGGTHMLPYPAPSLPPFPP
TFYYSNSSLTSAPTSSSSTSSLPLPPLLSPMSSSESTHFSSSGAGGPSSP
PSLPSSPPPPHAHVPLMTVG*
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Synonyms
Publications