NO17G00330, NO17G00330 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G00330 vs. NCBI_GenBank
Match: CBJ25446.1 (G-rich sequence factor 1 [Ectocarpus siliculosus]) HSP 1 Score: 90.9 bits (224), Expect = 1.200e-14 Identity = 87/391 (22.25%), Postives = 161/391 (41.18%), Query Frame = 0 Query: 113 VLLEGLPYAAVESDVRTFLH--GFDVQSLLLPMAPENTKRAGETKGIGIIKLSSEEEAKKAVAALNGQKILGRWVAVEQCVDP---ALCKTIK-IRGVPFAATPDDLSSYFTGLFGEVESVIISHDRNGIAYVTFKEPGSAAEALTRDGCEMSGRWLDITLYL----KGTFRSQGGXXXXXXXXXXXXXXXXXXRARQGNMVVKKNRLRLSGLPFEATLEELTAAL---EALDLPISNVFMPPYRANPEKNIGIAYLNIHDDVAYAQALSISSFSLRERVVYMKEATERVTLSSPEGGLXXXXXXXXXXXXALVRDKPWQNRVYCGNLPFDITSSDLAAFFAENDV--TGLDKIALP-----RTKIGTAYLAFDTKEMAEKAVALDGQLIE 484 + ++GLP+ ++ + G + +P+ PE + RAG+ KG + S EE+ +KA+ +L+G+ I RW+ + + P A TIK ++G P + EV+ V + G+A++ F+ P A AL DG + +W+D++L++ FR G G V + + L GLPF +E+ A + E + I + +P + + N GIA ++ D + A+AL + + ER V + ER + + +L P V LPF T ++ F + V + + ++ +P + GT ++ + E + L+G ++ Sbjct: 123 IQVDGLPFTMATEELEQWFEEAGCSPPKVTVPLWPERSIRAGQNKGKAYLHFSGEEDVRKAL-SLSGRSIGERWINISRLAQPLEEACTITIKGLQGFPESEVVAIFEEAVGAAPVEVKIVENPNRSRGLAFIKFEMPDLARAALHLDGTNIQNQWVDVSLHVMKQSSNEFRLGTGSQPPF-----------------GPDVPDEMVVMLKGLPFSLLEDEIKAFILNHEIAEDEIVAINVPKFN-ETQFNTGIAMIHFKSDESVARALELKGTHIGERWVDVSRWNERNKPNQRKSHRDQMEETRSAVKTSLKEKHPSLPVVSISGLPFHKTEEEVIEFLEASGVPRSAMLEVEMPLFLQTQNNTGTCWVVISDEGAYETLMELNGATLD 494
BLAST of NO17G00330 vs. NCBI_GenBank
Match: XP_001893871.1 (RNA binding protein [Brugia malayi]) HSP 1 Score: 77.0 bits (188), Expect = 1.800e-10 Identity = 52/170 (30.59%), Postives = 90/170 (52.94%), Query Frame = 0 Query: 112 WVLLEGLPYAAVESDVRTFLHGFDVQSLLLPMAPENTKRAGETKGIGIIKLSSEEEAKKAVAALNGQKILGRWVAVEQCVDPALCKTIKIRGVPFAATPDDLSSYFTGLFGEVESVIISHD----RNGIAYVTFKEPGSAAEALTRDGCEMSGRWLDITLYLKGTFRSQG 278 ++ L GLP++A E DVR FL G +V+S+ + + RA + ++ + EEAK+ + Q++ R++ +Q D +++RG+PF+AT +D+ +F+GL EV V+I + +G A+V F A AL R+ M R++++ FRS G Sbjct: 55 YIRLRGLPFSAKEDDVRAFLEGLEVKSVTFTLT--SMGRASGECYVELVDKVAAEEAKR----FDKQEMNNRYIEGDQ--DTPYNFVVRLRGIPFSATNNDVKEFFSGL--EVADVVIDKELGGRPSGEAFVRFASKQHAEMALERNRNNMGSRYVEV-------FRSSG 207
BLAST of NO17G00330 vs. NCBI_GenBank
Match: CBJ25569.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 76.6 bits (187), Expect = 2.400e-10 Identity = 94/403 (23.33%), Postives = 163/403 (40.45%), Query Frame = 0 Query: 113 VLLEGLPYAAVESDVRTFLHGFDVQSLLLPMAPENTKRAGETKGIGIIKLSSEEEAKKAVAALNGQKILGRWVA---------VEQCVDPALCK---------TIKIRGVPFAATPDDLSSYFTGLFGEVESVIISHDR----NGIAYVTFKEPGSAAEALTRDGCEMSGRWLDITLYLKGTFRSQGGXXXXXXXXXXXXXXXXXXRARQGNMVVKKNR------LRLSGLPFEATLEELTAALEALDLPISNVFMPPYRANPE-KNIGIAYLNIHDDVAYAQALSISSFSLRERVVYMKEATERVTLSSPEGGLXXXXXXXXXXXXALVRDKPWQNRVYCGNLPFDITSSDLAAFFAENDVTGLDKIAL---PRTKIGTAYLAFDTKEMAEKAV-ALDGQLI 483 V L GLP+ A ++ F DV+ + ++G +KL +E + + A+ + +GR VE +D K +++RG+P++A D+ ++F G+ E + + ++ +R +G AYV F+ +A EAL RD ++ RW+DI KG S G + QG + +R+ GLPFEAT ++ A + +++ SN+F+ P+ K G A++ + +AL L +R + + AT + L G A D ++ + LPF ++ FF V + G +Y+ FD+++ AE+A ALD Q I Sbjct: 48 VHLRGLPWNASTKELVDFFAPMDVED-------GDIHLVHNSRGEAYVKLKNESDLETALK--KDRNTIGRRYIEVFRSSIEDVEHALDDVSSKGHGDGGYKGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMTG--------------GGGKKGDQGGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIV---TRPDGKASGEAFVLFSTEAEAEKALLKDKEKLGDRWIDL-FATNKGALYQRVG---------VGVKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKI 414
BLAST of NO17G00330 vs. NCBI_GenBank
Match: XP_002945978.1 (splicing factor like protein [Volvox carteri f. nagariensis] >EFJ52973.1 splicing factor like protein [Volvox carteri f. nagariensis]) HSP 1 Score: 74.7 bits (182), Expect = 9.100e-10 Identity = 50/184 (27.17%), Postives = 87/184 (47.28%), Query Frame = 0 Query: 106 PKPSGPWVLLEGLPYAAVESDVRTFLHGFDVQSLLLPMAPENTKRAGETKGIGIIKLSSEEEAKKAVAALNGQKILGRWVAVEQCVDPALCK------------TIKIRGVPFAATPDDLSSYF-------TGLFGEVESVIISHDRNGIAYVTFKEPGSAAEALTRDGCEMSGRWLDITLYLK 271 P+P + L GLP++A E DVR F GF+V +++ KRAG + G G ++L S A +A+ L+ Q + R++ V + + L ++ RG+P+ AT D+ ++F G+ G V + G A+V F+ + EAL + M R++++ + K Sbjct: 31 PQPKSSVLRLRGLPFSAGEEDVRHFFSGFNVAQVVI------GKRAGRSTGEGYVQLDSTSAAAEAIMKLHRQTLGHRYIEVFESTEADLATAKSLSVDRMRGFVVRCRGLPYTATAQDVLNFFGSDAPVVRGIEGVVFTYAPDGRPTGEAFVEFQTEDAQREALKKHKESMGARYIELFVSTK 208
BLAST of NO17G00330 vs. NCBI_GenBank
Match: XP_003142925.1 (RNA binding protein [Loa loa] >EFO21147.1 RNA binding protein [Loa loa]) HSP 1 Score: 73.9 bits (180), Expect = 1.500e-9 Identity = 54/188 (28.72%), Postives = 90/188 (47.87%), Query Frame = 0 Query: 112 WVLLEGLPYAAVESDVRTFLHGFDVQSLLLPMAPENTKRAGETKGIGIIKLSSEEEAKKAVAALNGQKILGRWVAVEQCV------------------DPALCKTIKIRGVPFAATPDDLSSYFTGLFGEVESVIISHD----RNGIAYVTFKEPGSAAEALTRDGCEMSGRWLDITLYLKGTFRSQG 278 ++ L GLP++A E DVR FL G +V+S+ + + RA + ++ ++ EEAK+ + Q++ R++ V D +++RG+PF+AT DD+ +FTGL EV V+I + +G A+V F A AL R+ M R++++ FRS G Sbjct: 62 YIRLRGLPFSAKEDDVRAFLEGLEVRSVTFTLT--SMGRASGECYVELVDKAAAEEAKR----FDKQEMNNRYIEVFNVTESEVVWMTRHNVIRKGDQDTPYNFVVRLRGIPFSATNDDVKEFFTGL--EVADVVIDKELGGRPSGEAFVRFASKQHAEMALERNRNNMGSRYVEV-------FRSSG 234
BLAST of NO17G00330 vs. NCBI_GenBank
Match: KXZ49011.1 (hypothetical protein GPECTOR_23g100 [Gonium pectorale]) HSP 1 Score: 70.1 bits (170), Expect = 2.200e-8 Identity = 49/184 (26.63%), Postives = 84/184 (45.65%), Query Frame = 0 Query: 106 PKPSGPWVLLEGLPYAAVESDVRTFLHGFDVQSLLLPMAPENTKRAGETKGIGIIKLSSEEEAKKAVAALNGQKILGRWVAVEQCVDPALCK------------TIKIRGVPFAATPDDLSSYF-------TGLFGEVESVIISHDRNGIAYVTFKEPGSAAEALTRDGCEMSGRWLDITLYLK 271 P P + L GLP++A E DVR F GF V +++ KRAG + G G ++L S A +A+ L+ Q + R++ V + + L ++ RG+P+ AT D+ ++F G+ G V + G A+V + + EAL + M R++++ + K Sbjct: 21 PAPKSNVLRLRGLPFSAGEEDVRHFFSGFIVSQIVI------GKRAGRSTGEGYVQLDSTAAAAEAILKLHRQTLGHRYIEVFESTEADLATAKSLSVDRMRGFVVRCRGLPYTATAQDVLNFFGPDVPIVRGIEGVVFTYAPDGRPTGEAFVELQSEEAQREALKKHKESMGARYIELFVSTK 198
BLAST of NO17G00330 vs. NCBI_GenBank
Match: CRZ25417.1 (Bm10721 [Brugia malayi]) HSP 1 Score: 68.9 bits (167), Expect = 5.000e-8 Identity = 52/183 (28.42%), Postives = 88/183 (48.09%), Query Frame = 0 Query: 112 WVLLEGLPYAAVESDVRTFLHGFDVQSLLLPMAPENTKRAGETKGIGIIKLSSEEEAKKAVAALNGQKILGRWVAVEQCV-------------DPALCKTIKIRGVPFAATPDDLSSYFTGLFGEVESVIISHD----RNGIAYVTFKEPGSAAEALTRDGCEMSGRWLDITLYLKGTFRSQG 278 ++ L GLP++A E DVR FL G +V+S+ + + +GE + K+++EE + +N + I V + V D +++RG+PF+AT +D+ +F+GL EV V+I + +G A+V F A AL R+ M R++++ FRS G Sbjct: 55 YIRLRGLPFSAKEDDVRAFLEGLEVKSVTFTLTSMG-RASGECYVELVDKVAAEEAKRFDKQEMNNRYIEVFNVTESEVVWMTRHNVIRKGDQDTPYNFVVRLRGIPFSATNNDVKEFFSGL--EVADVVIDKELGGRPSGEAFVRFASKQHAEMALERNRNNMGSRYVEV-------FRSSG 227
BLAST of NO17G00330 vs. NCBI_GenBank
Match: KHN86388.1 (Heterogeneous nuclear ribonucleoprotein F [Toxocara canis]) HSP 1 Score: 67.8 bits (164), Expect = 1.100e-7 Identity = 51/195 (26.15%), Postives = 87/195 (44.62%), Query Frame = 0 Query: 108 PSGPWVLLEGLPYAAVESDVRTFLHGFDVQSLLLPMAPENTKRAGETKGIGIIKLSSEEEAKKAVAALNGQKILGRWVAVEQCVDPALCK---------------------TIKIRGVPFAATPDDLSSYFTGLFGEVESVIISHDR----NGIAYVTFKEPGSAAEALTRDGCEMSGRWLDITLYLKGTFRSQG 278 P ++ L GLP+AA ESDVR FL G +++ + +G G ++L+ K+A+ L+ +I GR++ V + L +++RG+P++A DD+ +F GL +V V+I ++ +G A+V A AL R M R++++ FRS G Sbjct: 3 PETNYIRLRGLPFAAKESDVRNFLQGITAKTITFTLT-----SSGRASGECYVELNDNNAVKEAL-KLDRNEISGRYIEVFTVSEGELAMMVRHGVIRRSGESESRYASNYVVRLRGLPYSANVDDIKEFFKGL--DVADVVIDKEQGGRPSGEAFVRLASKEHAELALERSKNNMGSRYVEV-------FRSSG 182
BLAST of NO17G00330 vs. NCBI_GenBank
Match: OLP85578.1 (Heterogeneous nuclear ribonucleoprotein F [Symbiodinium microadriaticum]) HSP 1 Score: 66.2 bits (160), Expect = 3.200e-7 Identity = 42/156 (26.92%), Postives = 81/156 (51.92%), Query Frame = 0 Query: 110 GPWVLLEGLPYAAVESDVRTFLHGFDVQSLLLPMAPENTKRAGETKGIGIIKLSSEEEAKKAVAALNGQKILGRWV----AVEQCVD--------PALCKTIKIRGVPFAATPDDLSSYFTG--LFGEVESVIISH-DRNGIAYVTFKEPGSAAEA 251 G + ++GLP++A + D+ F GF + + + G+ GI I++++SE +A+KA LN Q + R++ A E+ +D P + ++++G+PF+A+ +++ +F G L G V + + ++GIA+V F A A Sbjct: 579 GKVLRMQGLPFSASKRDIEQFFTGFGLSRMHI-----QVDGFGQPTGIAIVEMASETDAQKAKVVLNRQHMGSRYIELLDARERDLDCLSSSHARPVAAQVLRVQGLPFSASKNEIEQFFAGYALSGRVHFQLDAFGQKSGIAFVEFASEADAKRA 729
BLAST of NO17G00330 vs. NCBI_GenBank
Match: KJH48435.1 (hypothetical protein DICVIV_05480 [Dictyocaulus viviparus]) HSP 1 Score: 65.9 bits (159), Expect = 4.200e-7 Identity = 48/173 (27.75%), Postives = 83/173 (47.98%), Query Frame = 0 Query: 108 PSGPWVLLEGLPYAAVESDVRTFLHGFDVQSLLLPMAPENTKRAGETKGIGIIKLSSEEEAKKAVAALNGQKILGRWVAVEQCVDPALC------------KTIKIRGVPFAATPDDLSSYFTGLFGEVESVIISHD---RNGIAYVTFKEPGSAAEALTRDGCEMSGRWLDI 266 P +V L GLPY+A ESD+R FL G V ++ + ++ G G +L S+++ KA+ + +++ GR++ + L K I++RG+PF+AT D+ +F GL E V+ +G A+V AA+AL + M R++++ Sbjct: 43 PQTTYVRLRGLPYSAKESDIRAFLDGIPVTTITM-----SSSHNGRPSGECYCELPSKQDTLKAL-EFHRKEMEGRYIEIFTVSIDELTNLKRVGLVTDDGKVIRLRGLPFSATIQDVKDFFKGL--NCEEVVFGRTGGRPSGEAFVRLATREEAAKALDFNKQHMGSRYVEV 207 The following BLAST results are available for this feature:
BLAST of NO17G00330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 13
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G00330 ID=NO17G00330|Name=NO17G00330|organism=Nannochloropsis oceanica|type=gene|length=3372bpback to top protein sequence of NO17G00330.1 >NO17G00330.1-protein ID=NO17G00330.1-protein|Name=NO17G00330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=504bpback to top Synonyms
Publications
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