NO17G00290, NO17G00290 (gene) Nannochloropsis oceanica

Overview
NameNO17G00290
Unique NameNO17G00290
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3290
Alignment locationchr17:108653..111942 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:108653..111942 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO17G00290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR005ncniR005Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR084ngnoR084Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G00290.1NO17G00290.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|433183gene_11181Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G00290.1NO17G00290.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G00290 ID=NO17G00290|Name=NO17G00290|organism=Nannochloropsis oceanica|type=gene|length=3290bp
GAGAGAGGGAGGGAGGGAGGAAAAGGAGGGATGGAGGGAAGAAGCAGTGT
AGATATGTAGGTTTAATGATTAAATTGTCCATTTTTTTCCTTTTTCCTTG
TGAGTCTTGTTGTAAGTCAGGGGTTTTGCACAGTGTGGGTGTATCCGTTA
GGGCTAGGGTAGTTGGAAAGGGGGAGGGGGATGATTGAGGAGAGTGCAAA
GAGGAAAGGTCAAGCAGCAGTGCACTCGCCTTCCCCAAGCCACCAGTGGG
CACGTGGGCGATACTCTCTTGTCTTCCACAAGCAAGTTGTTTAAATGAAT
AAAAAACATGACCGGACGAACAAACAAAATACGTGAGCAGGGACTGAACC
CGAGTGATAAATTGGTAAGATCGTTTTGTTCTTTCGAGCCACAAGTGGCA
GCCTGGCGCTGCTCGGCACAGATTAACAAGGCGCAGTAAGGAACACGACA
CTAGCTTAAAAGCAATAGAAATATCACAACAATACACAGAAACGCAATAA
AAAGCAAGGAGAAGACAGGCTCGATATGTAGGCTGCCACTGGTTTCTCCG
GAGTGTCTGTTCTTTCCGGGTGGCATGTGACCACGTCGGCTTTCCTCCGC
TTCAACCTGGCTTGACACATGCCGTCTGCTTTTCTCTAAGGCCGAGTTGA
GGTGGTGCTCTCAAATTTCTGGATGGCTTTGTGGTAGATGACAGCCACTC
ACCTTGGAAGGGAGCACAGGTACCACACACACCCTAGGATTGGGTTGCAA
AATGAGGGGATAAAGCTCATCTCCACGCTGACGATCTCGACGAAACAGAA
ACACTTCAGACCGCACTGATCCAATCGTCGTCCTCGACTTGAGGTACTGA
TGTGGACCATGTCACACGTCTCCAGCATCTATCCTTGCTTCTGCAATCTG
CTCTCCTTTCGTGTCTGTTTTGGGCATTGCATCTTGACTGGCTTTTCTTA
TCAGTATCACCACCCACTTAGTGAGTCAGGCCCAGGTGACATAGCATAGT
CTTCGTCAGCAACAACAGATGGGTTCGCGCTACAACCAACAAGCAAGTGG
AACAACGCTTGACGCGTGCCTTCTGTCCTCAACCGAGCCTACACTTGACG
CACATGTTTCACACAATACCTTGCATAGGTCGCAAGCCACCCAAAAATAG
GCCCAAAGGACGCAGTAGGGCGCGTTTATTCACGTGTCCCGCGCGCGGCG
CCCCCATTTGCTTCCCCTCCCCCCACCAACCCCTGCTACTTGGGCCTGAG
CCGATTCACTGACAGCAGgtaagcttccctgaagttgagatgcagtggga
gggttgcgccatttaaagcagatgttcaggactggaaattgccaatctat
cgcggtgtctggaagcgcccctactcttttctgacggagacttgccgctt
agttcggtctcagcaagcacacctcctgaccctctgtcactcactccgtc
tttgtatccctcccctcctcacccatcaccataacagGATTACCAGAAAA
CCAATGAAACGGAGCAAGACCGTCGGTGACCTGGTTGGCCTCGGTCACTA
CGAGCGCCGCAGGCAGGTCTGGGCCCGGAAAAAGGAACGCGCCTCCCTCC
TCAAGTTCCCCTCTTCTCCCCCTTCTTTAGCCTCGCCGATTCCCCCATCT
ATCCCCACGCATGGCTTTTCTGTTGGTGCTGCCAGCAGCAGCAGCAGCAG
CAGCCGCAGCAGCAGTCGCAACAGCAGTACGAATAACAACGACGTGGCCG
CACCGCGTCCACTGCGGGCGCATGTCCCTCTTCAAGCACCTCCTCAACCA
TCACCTATTGGTGTTGGAGAGGGAGAAATAGAAATGCTCCCTTCCCCCTG
CCTTCCCTCCCTCCCTTCTCTCACCCGGCAACACACCATATCGGTGGCGG
CGGAAGACAAGGCTACAGTCGCTGCGGTGTTTTCGTCAATGGCAATGgta
aggagaaaggaaggaagggcggccctgatttgagagagcagagaaagcaa
tcaaatcagtcagtcacgcctactcaccacttcccttcccttcctccctc
cccctctcctacccccctccctccttctcttcctcattcacagCTTAAAC
TTCAGTCGAGCCACAGCACCTCCAGCGAATCTCTGGCCACCACGATCCTC
CCCTCCTTCTGCTCCTCCTCCCGTTCCTCCTCCTCCCTCTCCTCTCTAAG
CGTCCCCTTTGGGCTGGGAGATACCTCCCCTTCCCGCTTGTCCTCCTCCT
CCTCCTCCTCCGGTTCTTCTTTTTCCTCCTATTCCACAAGCACCGCCAGG
AGAAAACGCAAATCCCATGACCTAGACCTTCGCTACCCAGGGGATGGAGG
AGCAGAAGAGATTGAGGACGAGGACGAGGAGGACGAGGAGGACGAGGAGG
AGGGAGGGGAAGGCAACAGAGATGGGACTGAGGACGGGAGCGAGGGATGG
GCGGAGGAAGGGCCTGCCAGCTATTGTATGGGAGGGCGTGGGAGAGAGGG
AGGGTGGGCGCACCTGGTAGATCCTGCCGAGATGCAAGTCGTGCAGGAAA
TCAGCGAGGACGAAGACGAAGACGAGGAAGAGAACGAGCTTTGGAAGGAG
GATGAAGAGGAGGAATGGAAGGAAGGGGGAGTGCCGTCATTTTCACCCAT
GTCGATCCACCTGCTTAAAAGGGGTTTGCATGCGAGGCAAAATATGGTCT
TGCCTCCAAAAAGAAACGGAAGGAGGGAAGGCATCGCAGCCAATGTTGCT
GCTCCGGCTCCGGTACTGGTAGTAGCGTAGGGATGTAAGTGTGGGAGAGG
ATGAATGAGAGGGAGGGAGGGAAGGAGGGGAAAGGGTTATGTAGTGAAAA
TGTGAAATATGACGCGAATTTGATATGATAGAATGGGTTGTTAGAATAGA
ATGTTTTGCCTTCCACGTTGCCGTGCGGGAAAGTGTCCAAACGGAACGGA
CCGAATGAAGGTATGAAGCGGGCGTGCTCAAGTGATAAGACTGACTTTAG
ATAGGGAGAACGATTTTTTTGGCCTTGAGAAAAGCAGCAGACTCTCGTCT
GCTCGTAGATTTTCATGGAGAAGAAAGTAGATGAGGCCACAGGGGGCCAC
GAGGCTCCAGGGAGAGAGCGAGAGCTAGATTACGTGAGCAGAGAGTGGAA
GACGAATGACAGACGCAAAACGAATTGAAAAGCGAGCGGAAAGCGACGAG
TAGTACAACAGCAGTAATTATCAAAACCATGCAGCGTATCAACCATTAAT
TGCGCACGTTTACAATGAATAAATGGACGAATTGTAACGA
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protein sequence of NO17G00290.1

>NO17G00290.1-protein ID=NO17G00290.1-protein|Name=NO17G00290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=377bp
MKRSKTVGDLVGLGHYERRRQVWARKKERASLLKFPSSPPSLASPIPPSI
PTHGFSVGAASSSSSSSRSSSRNSSTNNNDVAAPRPLRAHVPLQAPPQPS
PIGVGEGEIEMLPSPCLPSLPSLTRQHTISVAAEDKATVAAVFSSMAMLK
LQSSHSTSSESLATTILPSFCSSSRSSSSLSSLSVPFGLGDTSPSRLSSS
SSSSGSSFSSYSTSTARRKRKSHDLDLRYPGDGGAEEIEDEDEEDEEDEE
EGGEGNRDGTEDGSEGWAEEGPASYCMGGRGREGGWAHLVDPAEMQVVQE
ISEDEDEDEEENELWKEDEEEEWKEGGVPSFSPMSIHLLKRGLHARQNMV
LPPKRNGRREGIAANVAAPAPVLVVA*
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Synonyms
Publications