NO17G00270, NO17G00270 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G00270 vs. NCBI_GenBank
Match: XP_002294345.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED88179.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 155.6 bits (392), Expect = 2.200e-34 Identity = 82/195 (42.05%), Postives = 122/195 (62.56%), Query Frame = 0 Query: 52 EEDRQSLPQEGIVKFAQAMGIEDPEGDVRVLVLMWKLGARRRPGQISREEFEGALKQLELDTLDKLRDRLLPSLDVDFLQGDDFKSFYRFAFLFSLEGTRRNIEKDMIVELLPMVIGQ----RSEYTSSFIAFLNE-TKKPEEMITADQWNQFYDFSLTYPTLEQLFKGYEE-DSAWPLLIDSFVDYLKAQQTGG 241 E+D EGI K + + DP D+RVLVL+WKLGA ++P +I REE+ +L D+L+KLR L+PSLD+ FL ++FK FY+F F F+ +GT + ++KD++V LL M + + +SF FL + T + IT DQW F DFSL + + E+L GY+E +SAWP+LID +V++++ GG Sbjct: 49 EDDCTVAGMEGISKLCTLLSL-DPYSDIRVLVLLWKLGASKKPAEIQREEWMAGCHRLNFDSLEKLRG-LVPSLDMGFLDMEEFKDFYKFCFQFNRQGTHKTLDKDLVVALLKMTLADPPRIPTPRLTSFCDFLEQSTDESYAKITLDQWRSFLDFSLEFGSDEELLSGYDEGESAWPVLIDEYVEFVEKMSKGG 241
BLAST of NO17G00270 vs. NCBI_GenBank
Match: XP_009041331.1 (hypothetical protein AURANDRAFT_33362, partial [Aureococcus anophagefferens] >EGB03906.1 hypothetical protein AURANDRAFT_33362, partial [Aureococcus anophagefferens]) HSP 1 Score: 134.4 bits (337), Expect = 5.200e-28 Identity = 76/179 (42.46%), Postives = 108/179 (60.34%), Query Frame = 0 Query: 62 GIVKFAQAMGIEDPEGDVRVLVLMWKLGARRRPGQISREEFEGALKQLELDTLDKLRDRLLPSLDVDFLQGDD---FKSFYRFAFLFSLEGTRRNIEKDMIVELLPMVIGQRSEYTSSFIAFLNETKKPEEMITADQWNQFYDFSLTYPTLEQLFKGYEEDSAWPLLIDSFVDYLKAQQ 238 G+V A+ I DP DVR+L L+W+LGA ++P I REE+ + + D+L+KL+ S D F+ F++F FLFS EGT R IEKD++ LLP+ IG RS +T+SF+AFL + +T DQW F +FS T+ F+GYEED AWPLL+D +V+ +A + Sbjct: 3 GLVDLCGALEI-DPASDVRLLALLWRLGA-KQPALILREEWAEGMAAIGCDSLEKLKAYAHISAVFHSPHAMDRRAFRDFFKFVFLFSREGTHRTIEKDIVAALLPIAIGDRSAHTASFLAFLETSSTTR--VTLDQWCSFLEFS---DTVAPDFEGYEEDGAWPLLLDEYVEQARADK 174
BLAST of NO17G00270 vs. NCBI_GenBank
Match: EJK69258.1 (hypothetical protein THAOC_09500 [Thalassiosira oceanica]) HSP 1 Score: 132.9 bits (333), Expect = 1.500e-27 Identity = 71/180 (39.44%), Postives = 107/180 (59.44%), Query Frame = 0 Query: 62 GIVKFAQAMGIEDPEGDVRVLVLMWKLGARRRPGQISREEFEGALKQLELDTLDKLRDRLLPSLDVDFLQGDDFKSFYRFAFLFSLEGTRRNIEKDMIVELLPMVIGQ---RSEYTSSFIAFLNETKKPE-EMITADQWNQFYDFSLTYPTLEQLFKGYEEDSAWPLLIDSFVDYLKAQQ 238 GI K + + + DP DVRVLVL++KLGA +P QI+REE+ L+LD++ K + LP LD F+ ++F F++F F F+ GT + ++KD++V LLPM +G + +FI FL +T IT DQW F DFS + L E+ SAWP+LID +V+Y++ ++ Sbjct: 93 GISKLCEQLSL-DPYEDVRVLVLLYKLGANSKPSQITREEWIEGCHTLKLDSIAKFK-AFLPQLDTGFMAREEFSDFFKFCFQFNRTGTHKTLDKDIVVMLLPMCLGGGRINANRLKTFIEFLEKTTDASYSKITLDQWRSFLDFSYEFEDDAALASYDEDGSAWPVLIDDYVEYMEGKR 270
BLAST of NO17G00270 vs. NCBI_GenBank
Match: GAX10968.1 (hypothetical protein FisN_2Lh498 [Fistulifera solaris]) HSP 1 Score: 132.9 bits (333), Expect = 1.500e-27 Identity = 78/204 (38.24%), Postives = 118/204 (57.84%), Query Frame = 0 Query: 41 QLFDSFLSDDPEE--DRQSLPQEGIVKFAQAMGIEDPEGDVRVLVLMWKLGARRRPGQISREEFEGALKQ--LELDTLDKLRDRLLPSLDVDFLQGDDFKSFYRFAFLFSLEGTRRNIEKDMIVELLPMVIGQR--SEYTSSFIAFLNETKKPEEM----ITADQWNQFYDFSLTYPTLEQLFKGYEEDSAWPLLIDSFVDYLK 235 +L D PEE D + L EGI + +G+ D E D+R++VL+WK+GA +PG +++ EF A K L +D +LP LD+ FL G++FK FY+F F F+ +GT + ++K+M+V LLPMV+ R S+ SF FL + +E IT DQW F+DF + E L + SAWP+LID +V++++ Sbjct: 41 ELLDGAAEIQPEEEIDTEQLNMEGIAILGEKLGL-DVETDLRIIVLLWKMGA-SKPGALTKTEFMEACKNGTLPVDNGWSSVKEMLPRLDIGFLTGNEFKDFYKFCFQFNRQGTHKTLDKEMVVALLPMVLKDRVPSDRLESFCEFLTSMEGKQEQQYNRITLDQWASFWDFCV---ECEDLGAYDQSSSAWPVLIDEYVEFME 239
BLAST of NO17G00270 vs. NCBI_GenBank
Match: GAX13013.1 (hypothetical protein FisN_2Hh498 [Fistulifera solaris]) HSP 1 Score: 132.5 bits (332), Expect = 2.000e-27 Identity = 77/204 (37.75%), Postives = 117/204 (57.35%), Query Frame = 0 Query: 41 QLFDSFLSDDPEE--DRQSLPQEGIVKFAQAMGIEDPEGDVRVLVLMWKLGARRRPGQISREEFEGALKQ--LELDTLDKLRDRLLPSLDVDFLQGDDFKSFYRFAFLFSLEGTRRNIEKDMIVELLPMVIGQR--SEYTSSFIAFLNETKKPEEM----ITADQWNQFYDFSLTYPTLEQLFKGYEEDSAWPLLIDSFVDYLK 235 +L D PEE D + L EGI + +G+ D E D+R++VL+WK GA +PG +++ EF A K L ++ +LP LD+ FL G++FK FY+F F F+ +GT + ++K+++V LLPMV+ R S+ SF FL + +E IT DQW F+DF + E L + SAWP+LID +V+Y++ Sbjct: 42 ELLDGAAEQQPEEEIDTEQLNMEGIAMLGEKLGL-DVETDLRIIVLLWKTGA-SKPGTLTKTEFMEACKNGTLPIENGWSSVKEMLPRLDIGFLTGNEFKDFYKFCFQFNRQGTHKTLDKELVVALLPMVLKDRVPSDRLESFCDFLTSMEGKQEQQYNRITLDQWASFWDFCV---ECEDLGAYDQSSSAWPVLIDEYVEYME 240
BLAST of NO17G00270 vs. NCBI_GenBank
Match: XP_009039300.1 (hypothetical protein AURANDRAFT_13851, partial [Aureococcus anophagefferens] >EGB06045.1 hypothetical protein AURANDRAFT_13851, partial [Aureococcus anophagefferens]) HSP 1 Score: 119.0 bits (297), Expect = 2.300e-23 Identity = 67/177 (37.85%), Postives = 101/177 (57.06%), Query Frame = 0 Query: 61 EGIVKFAQAMGIEDPEGDVRVLVLMWKLGARRRPGQISREEFEGALKQLELDTLDK-----LRDRLLPSLDVDFLQGDDFKSFYRFAFLFSLEGTRRNIEKDMIVELLPMVIGQRSEYTSSFIAFLNETKKPEEMITADQWNQFYDFSLTYPTLEQLFKGYEEDSAWPLLIDSFVDY 233 EG+ K + +GI D D ++LVL W+LGA +PG +S EE+ + L T DK +LD FL+ DF+ F++F F F+ EGT++ +E+D + LLP+ I RS++T +F+ FL ETK + I DQW F DFSL ++S+WP+L+D FV++ Sbjct: 1 EGLGKLGEDLGI-DASSDTKLLVLCWRLGA-EKPGCVSEEEWAKLGSEPSLPTCDKPVTLETLKAGWSTLDPAFLENSDFRPFFKFCFEFNREGTKKFLERDTALALLPICIEDRSKHTKTFLEFL-ETKPEDFKINRDQWCSFLDFSLNVGPAPDFLGWDADESSWPILLDEFVEF 174
BLAST of NO17G00270 vs. NCBI_GenBank
Match: XP_004287216.1 (PREDICTED: DCN1-like protein 5 [Fragaria vesca subsp. vesca]) HSP 1 Score: 115.2 bits (287), Expect = 3.300e-22 Identity = 65/200 (32.50%), Postives = 113/200 (56.50%), Query Frame = 0 Query: 38 RLTQLFDSFLSDDPEEDRQSLPQEGIVKFAQAMGIEDPEGDVRVLVLMWKLGARRRPGQISREEFEGALKQLELDTLDKLRDRLLPSLDVDFLQGDDFKSFYRFAFLFSL-EGTRRNIEKDMIVELLPMVIGQRSEYTSSFIAFLNETKKPEEMITADQWNQFYDF--SLTYPTLEQLFKGYEEDSAWPLLIDSFVDYLK 235 ++ LFD +++ + + EGIV F +G++ DVR+L+L WK+ A ++ G SREE+ LK L DT+ KL+ + LP L+ + + F+ FY FAF + L E +++++ + + ELL +V+G + + + + + ADQW FY F +++P LE Y+ D AWP++ID+FV+++K Sbjct: 38 KIGDLFDVYVN----KSLDMIDPEGIVSFCSHLGVD--HTDVRILMLAWKMKAEKQ-GYFSREEWRRGLKDLNADTIAKLK-KALPGLEKELMATPKFEDFYAFAFQYCLTEDRQKSVDIETVCELLNLVLGPKYRSQVDILTKYLKVQSEYRALNADQWRHFYRFCKEISFPDLED----YDSDQAWPVIIDNFVEWMK 225
BLAST of NO17G00270 vs. NCBI_GenBank
Match: XP_023918560.1 (DCN1-like protein 5 isoform X1 [Quercus suber] >POF02773.1 dcn1-like protein 5 [Quercus suber]) HSP 1 Score: 114.4 bits (285), Expect = 5.600e-22 Identity = 67/203 (33.00%), Postives = 119/203 (58.62%), Query Frame = 0 Query: 38 RLTQLFDSFLSDDPEEDRQSLPQEGIVKFAQAMGIEDPEGDVRVLVLMWKLGARRRPGQISREEFEGALKQLELDTLDKLRDRLLPSLDVDFLQGDDFKSFYRFAFLFSL-EGTRRNIEKDMIVELLPMVIGQRSEYTSSFIAFLNETKKPEEMITADQWNQFYDF--SLTYPTLEQLFKGYEEDSAWPLLIDSFVDYLKAQQ 238 R+ QLFDS+ + +D + EG+ MG++ DVR+L+L WK+ A+++ G S++E+ LK L++D L+KL+ + LP+L+ + + +F+ FY FAF + L E ++ ++ + I ELL +V+G + I + + ++T DQW FY F +++P L Y+ D AWPL++DSFV++L+ ++ Sbjct: 69 RIDQLFDSYAN----KDLGLIDPEGVETLCSDMGVQ--HTDVRILMLAWKMKAKKQ-GYFSKDEWRTGLKALKVDNLEKLK-KALPTLETEVMTPPNFEDFYAFAFKYCLTEEMQKCVDVETICELLNLVLGSQFCAQVDSITEYLKFQSDYRVLTMDQWVNFYRFCHEISFPDLH----NYDSDQAWPLILDSFVEWLREKR 259
BLAST of NO17G00270 vs. NCBI_GenBank
Match: XP_023918562.1 (DCN1-like protein 4 isoform X3 [Quercus suber] >POF02774.1 dcn1-like protein 4 [Quercus suber]) HSP 1 Score: 114.4 bits (285), Expect = 5.600e-22 Identity = 67/203 (33.00%), Postives = 119/203 (58.62%), Query Frame = 0 Query: 38 RLTQLFDSFLSDDPEEDRQSLPQEGIVKFAQAMGIEDPEGDVRVLVLMWKLGARRRPGQISREEFEGALKQLELDTLDKLRDRLLPSLDVDFLQGDDFKSFYRFAFLFSL-EGTRRNIEKDMIVELLPMVIGQRSEYTSSFIAFLNETKKPEEMITADQWNQFYDF--SLTYPTLEQLFKGYEEDSAWPLLIDSFVDYLKAQQ 238 R+ QLFDS+ + +D + EG+ MG++ DVR+L+L WK+ A+++ G S++E+ LK L++D L+KL+ + LP+L+ + + +F+ FY FAF + L E ++ ++ + I ELL +V+G + I + + ++T DQW FY F +++P L Y+ D AWPL++DSFV++L+ ++ Sbjct: 42 RIDQLFDSYAN----KDLGLIDPEGVETLCSDMGVQ--HTDVRILMLAWKMKAKKQ-GYFSKDEWRTGLKALKVDNLEKLK-KALPTLETEVMTPPNFEDFYAFAFKYCLTEEMQKCVDVETICELLNLVLGSQFCAQVDSITEYLKFQSDYRVLTMDQWVNFYRFCHEISFPDLH----NYDSDQAWPLILDSFVEWLREKR 232
BLAST of NO17G00270 vs. NCBI_GenBank
Match: XP_023918561.1 (DCN1-like protein 5 isoform X2 [Quercus suber]) HSP 1 Score: 114.4 bits (285), Expect = 5.600e-22 Identity = 67/203 (33.00%), Postives = 119/203 (58.62%), Query Frame = 0 Query: 38 RLTQLFDSFLSDDPEEDRQSLPQEGIVKFAQAMGIEDPEGDVRVLVLMWKLGARRRPGQISREEFEGALKQLELDTLDKLRDRLLPSLDVDFLQGDDFKSFYRFAFLFSL-EGTRRNIEKDMIVELLPMVIGQRSEYTSSFIAFLNETKKPEEMITADQWNQFYDF--SLTYPTLEQLFKGYEEDSAWPLLIDSFVDYLKAQQ 238 R+ QLFDS+ + +D + EG+ MG++ DVR+L+L WK+ A+++ G S++E+ LK L++D L+KL+ + LP+L+ + + +F+ FY FAF + L E ++ ++ + I ELL +V+G + I + + ++T DQW FY F +++P L Y+ D AWPL++DSFV++L+ ++ Sbjct: 68 RIDQLFDSYAN----KDLGLIDPEGVETLCSDMGVQ--HTDVRILMLAWKMKAKKQ-GYFSKDEWRTGLKALKVDNLEKLK-KALPTLETEVMTPPNFEDFYAFAFKYCLTEEMQKCVDVETICELLNLVLGSQFCAQVDSITEYLKFQSDYRVLTMDQWVNFYRFCHEISFPDLH----NYDSDQAWPLILDSFVEWLREKR 258 The following BLAST results are available for this feature:
BLAST of NO17G00270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G00270 ID=NO17G00270|Name=NO17G00270|organism=Nannochloropsis oceanica|type=gene|length=3997bpback to top protein sequence of NO17G00270.1 >NO17G00270.1-protein ID=NO17G00270.1-protein|Name=NO17G00270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=271bpback to top Synonyms
Publications
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