NO17G00180, NO17G00180 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G00180 vs. NCBI_GenBank
Match: EWM20337.1 (aig2-like protein [Nannochloropsis gaditana]) HSP 1 Score: 242.3 bits (617), Expect = 9.800e-61 Identity = 114/151 (75.50%), Postives = 124/151 (82.12%), Query Frame = 0
Query: 1 MKLHFVYGSLMSPEVLKELLDRVPVLVPGTLAGYRRWRVPDQVYPGILPDP--SKNVEGFLVKELLDSEVQIFDAFEGDDYIKTATKITVSAASPHLPVGEHEAWVYVWKPVPGQPLVEDWSYDETFLPHLKPYLEMSREFRESLTHIPRP 150
M LHFVYGSLMSPEV+KELL R+P +PGTL GY RWRVPDQVYPGILP P V GFLVK+LL SEV+IFDAFEGDDYIKT I VS ASPHL GEH+AW YVWKPVPGQPLVE W Y++TFLPHL+ YL SREFR+SLTHIPRP
Sbjct: 1 MTLHFVYGSLMSPEVVKELLGRIPPQIPGTLFGYTRWRVPDQVYPGILPGPVGKSEVPGFLVKDLLASEVEIFDAFEGDDYIKTPVTIRVSEASPHLHPGEHQAWAYVWKPVPGQPLVEHWDYEKTFLPHLEDYLASSREFRDSLTHIPRP 151
BLAST of NO17G00180 vs. NCBI_GenBank
Match: PAN03974.1 (hypothetical protein PAHAL_A00258 [Panicum hallii]) HSP 1 Score: 110.2 bits (274), Expect = 5.800e-21 Identity = 55/139 (39.57%), Postives = 81/139 (58.27%), Query Frame = 0
Query: 5 FVYGSLMSPEVLKELLDRVPVLVPGTLAGYRRWRVPDQVYPGILPDPSKNVEGFLVKELLDSEVQIFDAFEGDDYIKTATKITVSAASPHLPVGEHEAWVYVWKPVPGQPLVEDWSYDETFLPHLKPYLEMSREFRESL 144
FVYG+LM+ EV++ LL R P P L G+RR+ + +VYP ILP P V G + K L D E+ +FD FE ++Y+K +++++ S + A+ Y+W L +W Y+E HLK YLEM+REF E +
Sbjct: 18 FVYGTLMAEEVVRVLLGRAPPSSPALLPGHRRFSLRGRVYPAILPVPGHAVNGKVFKGLTDRELHVFDLFEDEEYVKKTVEVSLADTSE-----KSLAYAYIWANEGDPDLYGEWDYEEWRKVHLKDYLEMTREFMEEV 151
BLAST of NO17G00180 vs. NCBI_GenBank
Match: PUZ74027.1 (hypothetical protein GQ55_1G032400 [Panicum hallii var. hallii]) HSP 1 Score: 110.2 bits (274), Expect = 5.800e-21 Identity = 55/139 (39.57%), Postives = 81/139 (58.27%), Query Frame = 0
Query: 5 FVYGSLMSPEVLKELLDRVPVLVPGTLAGYRRWRVPDQVYPGILPDPSKNVEGFLVKELLDSEVQIFDAFEGDDYIKTATKITVSAASPHLPVGEHEAWVYVWKPVPGQPLVEDWSYDETFLPHLKPYLEMSREFRESL 144
FVYG+LM+ EV++ LL R P P L G+RR+ + +VYP ILP P V G + K L D E+ +FD FE ++Y+K +++++ S + A+ Y+W L +W Y+E HLK YLEM+REF E +
Sbjct: 18 FVYGTLMAEEVVRVLLGRAPPSSPALLPGHRRFSLRGRVYPAILPVPGHAVNGKVFKGLTDRELHVFDLFEDEEYVKKTVEVSLADTSE-----KSLAYAYIWANEGDPDLYGEWDYEEWRKVHLKDYLEMTREFMEEV 151
BLAST of NO17G00180 vs. NCBI_GenBank
Match: XP_002451522.1 (AIG2-like protein D [Sorghum bicolor] >EES04498.1 hypothetical protein SORBI_3004G037700 [Sorghum bicolor]) HSP 1 Score: 106.3 bits (264), Expect = 8.400e-20 Identity = 53/139 (38.13%), Postives = 82/139 (58.99%), Query Frame = 0
Query: 5 FVYGSLMSPEVLKELLDRVPVLVPGTLAGYRRWRVPDQVYPGILPDPSKNVEGFLVKELLDSEVQIFDAFEGDDYIKTATKITVSAASPHLPVGEHEAWVYVWKPVPGQPLVEDWSYDETFLPHLKPYLEMSREFRESL 144
FVYG+L++ EV++ LL R P P LA +RR+ + +VYP ILP V G ++KEL D E+ +FD FE ++Y+KT +++++ A + A Y+W L +W ++E HLK YLEM++EF + L
Sbjct: 17 FVYGTLIAEEVVRVLLGRAPPSSPAILADHRRFSIRGRVYPAILPARGHAVSGKVLKELTDRELHVFDMFEDEEYVKTTVEVSLADAQE-----KSIACAYIWGNERDPDLYGEWDFEEWRKVHLKDYLEMTQEFMQEL 150
BLAST of NO17G00180 vs. NCBI_GenBank
Match: XP_004951921.1 (AIG2-like protein D [Setaria italica] >KQL28773.1 hypothetical protein SETIT_018576mg [Setaria italica]) HSP 1 Score: 105.1 bits (261), Expect = 1.900e-19 Identity = 52/139 (37.41%), Postives = 81/139 (58.27%), Query Frame = 0
Query: 5 FVYGSLMSPEVLKELLDRVPVLVPGTLAGYRRWRVPDQVYPGILPDPSKNVEGFLVKELLDSEVQIFDAFEGDDYIKTATKITVSAASPHLPVGEHEAWVYVWKPVPGQPLVEDWSYDETFLPHLKPYLEMSREFRESL 144
FVYG+LM+ EV++ LL R P P L G+RR+ + +VYP ILP + V G ++K L D E+ +FD FE ++Y+K +++++ + A+ Y+W L +W Y+E HLK YLEM+REF + +
Sbjct: 18 FVYGTLMAEEVVRVLLGRAPPSSPAHLPGHRRFSLRGRVYPAILPARAHAVNGKVIKGLTDRELHVFDLFEDEEYVKRTVEVSLTDT-----LERSLAYAYIWGNEGDPDLYGEWDYEEWRKVHLKDYLEMTREFMDEV 151
BLAST of NO17G00180 vs. NCBI_GenBank
Match: KNA25318.1 (hypothetical protein SOVF_007630 [Spinacia oleracea]) HSP 1 Score: 104.8 bits (260), Expect = 2.400e-19 Identity = 51/141 (36.17%), Postives = 84/141 (59.57%), Query Frame = 0
Query: 5 FVYGSLMSPEVLKELLDRVPVLVPGTLAGYRRWRVPDQVYPGILPDPSKNVEGFLVKELLDSEVQIFDAFEGDDYIKTATKITVSAASPHLPVGEHEAWVYVWKPVPGQPLVEDWSYDETFLPHLKPYLEMSREFRESLTH 146
FVYGSL++ EV++ LL+RVP P TL Y R+ + +VYP ILP +K V G ++ + + E+ I D FE +Y++ + ++T+ L +A+ YVW L EDW +++ + H+K ++EM++EF E + H
Sbjct: 18 FVYGSLLADEVVQVLLNRVPSSSPATLPDYNRFSIKGRVYPAILPVENKKVLGRVLTGVTNLELDILDIFEDVEYVRDSVEVTIVDNLEKL-----QAYAYVWDNKNDPDLYEDWDFEKWKVAHMKDFIEMTKEFVEEVEH 153
BLAST of NO17G00180 vs. NCBI_GenBank
Match: XP_021843989.1 (AIG2-like protein D isoform X1 [Spinacia oleracea]) HSP 1 Score: 104.0 bits (258), Expect = 4.200e-19 Identity = 51/141 (36.17%), Postives = 84/141 (59.57%), Query Frame = 0
Query: 5 FVYGSLMSPEVLKELLDRVPVLVPGTLAGYRRWRVPDQVYPGILPDPSKNVEGFLVKELLDSEVQIFDAFEGDDYIKTATKITVSAASPHLPVGEHEAWVYVWKPVPGQPLVEDWSYDETFLPHLKPYLEMSREFRESLTH 146
FVYGSL++ EV++ LL+RVP P TL Y R+ + +VYP ILP +K V G ++ + + E+ I D FE +Y++ + ++T+ L +A+ YVW L EDW +++ + H+K ++EM++EF E + H
Sbjct: 20 FVYGSLLADEVVQVLLNRVPSSSPATLPDYNRFSIKGRVYPAILPVENKKVLGRVLTGVTNLELDILDIFEDVEYVRDSVEVTLVDNLEKL-----QAYAYVWDNKNDPDLYEDWDFEKWKVAHMKDFIEMTKEFVEEVEH 155
BLAST of NO17G00180 vs. NCBI_GenBank
Match: GBG24947.1 (AIG2-like protein D [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 104.0 bits (258), Expect = 4.200e-19 Identity = 57/143 (39.86%), Postives = 75/143 (52.45%), Query Frame = 0
Query: 1 MKLHFVYGSLMSPEVLKELLDRVPVLVPGTLAGYRRWRVPDQVYPGI-LPDPSKNVEGFLVKELLDSEVQIFDAFEGDDYIKTATKITVSAASPHLPVGEHEAWVYVWKPVPGQPLVED-WSYDETFLPHLKPYLEMSREFRE 142
M + FVYGSLM VL ++ R+P PG L GY R+ + D+VYPGI P V G LV +L D E++ D+FE DDY + I H A VYVWK L W YD+ F+PH++ Y+ S+ F E
Sbjct: 1 MNVVFVYGSLMEERVLSTVVGRMPAFQPGLLLGYTRYAIKDRVYPGIRTTKPDDKVTGLLVSKLSDEEIRRLDSFEDDDYDRVEENIFTENGE------AHRANVYVWKKELEAELKPTLWDYDKDFMPHVEEYVANSKRFAE 137
BLAST of NO17G00180 vs. NCBI_GenBank
Match: PUZ59229.1 (hypothetical protein GQ55_4G023600 [Panicum hallii var. hallii]) HSP 1 Score: 103.6 bits (257), Expect = 5.400e-19 Identity = 51/139 (36.69%), Postives = 78/139 (56.12%), Query Frame = 0
Query: 5 FVYGSLMSPEVLKELLDRVPVLVPGTLAGYRRWRVPDQVYPGILPDPSKNVEGFLVKELLDSEVQIFDAFEGDDYIKTATKITVSAASPHLPVGEHEAWVYVWKPVPGQPLVEDWSYDETFLPHLKPYLEMSREFRESL 144
FVYGSLM+ EV++ +L RVP P L Y R+ + ++YP ILP SK VEG ++ + D E+Q+ DAFE +Y +T +I+++ +S + A YVW L +W ++E H+K +L M+ F L
Sbjct: 24 FVYGSLMADEVVRAILKRVPPAAPALLPNYHRFNIKGRIYPAILPVESKKVEGMVIMGVTDEELQVLDAFEDVEYTRTRVEISLADSSEKM-----LADTYVWSDAEDSNLYGEWDFEEWKKLHMKDFLAMTNGFMHGL 157
BLAST of NO17G00180 vs. NCBI_GenBank
Match: XP_017241168.1 (PREDICTED: AIG2-like protein [Daucus carota subsp. sativus]) HSP 1 Score: 102.8 bits (255), Expect = 9.300e-19 Identity = 55/147 (37.41%), Postives = 81/147 (55.10%), Query Frame = 0
Query: 1 MKLH--FVYGSLMSPEVLKELLDRVPVLVPGTLAGYRRWRVPDQVYPGILPDPSKNVEGFLVKELLDSEVQIFDAFEGDDYIKTATKITVSAASPHLPVGEHEAWVYVWKPVPGQPLVEDWSYDETFLPHLKPYLEMSREFRESLTH 146
M LH FVYGSL + EV+K LL R+P P TL Y R+ + ++VYP ILP K V G ++ E+ D E+ + DAFE +Y + +T+S S L V + YVW+ L +W +E H+K +++M+ F + L H
Sbjct: 14 MGLHNVFVYGSLQAEEVVKVLLKRIPRTSPATLNNYHRFSIKERVYPAILPVADKKVTGKVLSEITDPELLVLDAFEDVEYERQTVDVTLSDTSEKLKV-----FAYVWRNSTDPALYGEWDLEEWKKVHMKDFVKMTMGFAQELEH 155 The following BLAST results are available for this feature:
BLAST of NO17G00180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G00180 ID=NO17G00180|Name=NO17G00180|organism=Nannochloropsis oceanica|type=gene|length=1115bpback to top protein sequence of NO17G00180.1 >NO17G00180.1-protein ID=NO17G00180.1-protein|Name=NO17G00180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=150bpback to top Synonyms
Publications
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