NO17G00180, NO17G00180 (gene) Nannochloropsis oceanica

Overview
NameNO17G00180
Unique NameNO17G00180
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1115
Alignment locationchr17:63655..64769 +

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Properties
Property NameValue
DescriptionAig2-like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr17genomechr17:63655..64769 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036568GGCT-like_sf
IPR009288AIG2-like
Homology
BLAST of NO17G00180 vs. NCBI_GenBank
Match: EWM20337.1 (aig2-like protein [Nannochloropsis gaditana])

HSP 1 Score: 242.3 bits (617), Expect = 9.800e-61
Identity = 114/151 (75.50%), Postives = 124/151 (82.12%), Query Frame = 0
Query:    1 MKLHFVYGSLMSPEVLKELLDRVPVLVPGTLAGYRRWRVPDQVYPGILPDP--SKNVEGFLVKELLDSEVQIFDAFEGDDYIKTATKITVSAASPHLPVGEHEAWVYVWKPVPGQPLVEDWSYDETFLPHLKPYLEMSREFRESLTHIPRP 150
            M LHFVYGSLMSPEV+KELL R+P  +PGTL GY RWRVPDQVYPGILP P     V GFLVK+LL SEV+IFDAFEGDDYIKT   I VS ASPHL  GEH+AW YVWKPVPGQPLVE W Y++TFLPHL+ YL  SREFR+SLTHIPRP
Sbjct:    1 MTLHFVYGSLMSPEVVKELLGRIPPQIPGTLFGYTRWRVPDQVYPGILPGPVGKSEVPGFLVKDLLASEVEIFDAFEGDDYIKTPVTIRVSEASPHLHPGEHQAWAYVWKPVPGQPLVEHWDYEKTFLPHLEDYLASSREFRDSLTHIPRP 151          
BLAST of NO17G00180 vs. NCBI_GenBank
Match: PAN03974.1 (hypothetical protein PAHAL_A00258 [Panicum hallii])

HSP 1 Score: 110.2 bits (274), Expect = 5.800e-21
Identity = 55/139 (39.57%), Postives = 81/139 (58.27%), Query Frame = 0
Query:    5 FVYGSLMSPEVLKELLDRVPVLVPGTLAGYRRWRVPDQVYPGILPDPSKNVEGFLVKELLDSEVQIFDAFEGDDYIKTATKITVSAASPHLPVGEHEAWVYVWKPVPGQPLVEDWSYDETFLPHLKPYLEMSREFRESL 144
            FVYG+LM+ EV++ LL R P   P  L G+RR+ +  +VYP ILP P   V G + K L D E+ +FD FE ++Y+K   +++++  S      +  A+ Y+W       L  +W Y+E    HLK YLEM+REF E +
Sbjct:   18 FVYGTLMAEEVVRVLLGRAPPSSPALLPGHRRFSLRGRVYPAILPVPGHAVNGKVFKGLTDRELHVFDLFEDEEYVKKTVEVSLADTSE-----KSLAYAYIWANEGDPDLYGEWDYEEWRKVHLKDYLEMTREFMEEV 151          
BLAST of NO17G00180 vs. NCBI_GenBank
Match: PUZ74027.1 (hypothetical protein GQ55_1G032400 [Panicum hallii var. hallii])

HSP 1 Score: 110.2 bits (274), Expect = 5.800e-21
Identity = 55/139 (39.57%), Postives = 81/139 (58.27%), Query Frame = 0
Query:    5 FVYGSLMSPEVLKELLDRVPVLVPGTLAGYRRWRVPDQVYPGILPDPSKNVEGFLVKELLDSEVQIFDAFEGDDYIKTATKITVSAASPHLPVGEHEAWVYVWKPVPGQPLVEDWSYDETFLPHLKPYLEMSREFRESL 144
            FVYG+LM+ EV++ LL R P   P  L G+RR+ +  +VYP ILP P   V G + K L D E+ +FD FE ++Y+K   +++++  S      +  A+ Y+W       L  +W Y+E    HLK YLEM+REF E +
Sbjct:   18 FVYGTLMAEEVVRVLLGRAPPSSPALLPGHRRFSLRGRVYPAILPVPGHAVNGKVFKGLTDRELHVFDLFEDEEYVKKTVEVSLADTSE-----KSLAYAYIWANEGDPDLYGEWDYEEWRKVHLKDYLEMTREFMEEV 151          
BLAST of NO17G00180 vs. NCBI_GenBank
Match: XP_002451522.1 (AIG2-like protein D [Sorghum bicolor] >EES04498.1 hypothetical protein SORBI_3004G037700 [Sorghum bicolor])

HSP 1 Score: 106.3 bits (264), Expect = 8.400e-20
Identity = 53/139 (38.13%), Postives = 82/139 (58.99%), Query Frame = 0
Query:    5 FVYGSLMSPEVLKELLDRVPVLVPGTLAGYRRWRVPDQVYPGILPDPSKNVEGFLVKELLDSEVQIFDAFEGDDYIKTATKITVSAASPHLPVGEHEAWVYVWKPVPGQPLVEDWSYDETFLPHLKPYLEMSREFRESL 144
            FVYG+L++ EV++ LL R P   P  LA +RR+ +  +VYP ILP     V G ++KEL D E+ +FD FE ++Y+KT  +++++ A       +  A  Y+W       L  +W ++E    HLK YLEM++EF + L
Sbjct:   17 FVYGTLIAEEVVRVLLGRAPPSSPAILADHRRFSIRGRVYPAILPARGHAVSGKVLKELTDRELHVFDMFEDEEYVKTTVEVSLADAQE-----KSIACAYIWGNERDPDLYGEWDFEEWRKVHLKDYLEMTQEFMQEL 150          
BLAST of NO17G00180 vs. NCBI_GenBank
Match: XP_004951921.1 (AIG2-like protein D [Setaria italica] >KQL28773.1 hypothetical protein SETIT_018576mg [Setaria italica])

HSP 1 Score: 105.1 bits (261), Expect = 1.900e-19
Identity = 52/139 (37.41%), Postives = 81/139 (58.27%), Query Frame = 0
Query:    5 FVYGSLMSPEVLKELLDRVPVLVPGTLAGYRRWRVPDQVYPGILPDPSKNVEGFLVKELLDSEVQIFDAFEGDDYIKTATKITVSAASPHLPVGEHEAWVYVWKPVPGQPLVEDWSYDETFLPHLKPYLEMSREFRESL 144
            FVYG+LM+ EV++ LL R P   P  L G+RR+ +  +VYP ILP  +  V G ++K L D E+ +FD FE ++Y+K   +++++       +    A+ Y+W       L  +W Y+E    HLK YLEM+REF + +
Sbjct:   18 FVYGTLMAEEVVRVLLGRAPPSSPAHLPGHRRFSLRGRVYPAILPARAHAVNGKVIKGLTDRELHVFDLFEDEEYVKRTVEVSLTDT-----LERSLAYAYIWGNEGDPDLYGEWDYEEWRKVHLKDYLEMTREFMDEV 151          
BLAST of NO17G00180 vs. NCBI_GenBank
Match: KNA25318.1 (hypothetical protein SOVF_007630 [Spinacia oleracea])

HSP 1 Score: 104.8 bits (260), Expect = 2.400e-19
Identity = 51/141 (36.17%), Postives = 84/141 (59.57%), Query Frame = 0
Query:    5 FVYGSLMSPEVLKELLDRVPVLVPGTLAGYRRWRVPDQVYPGILPDPSKNVEGFLVKELLDSEVQIFDAFEGDDYIKTATKITVSAASPHLPVGEHEAWVYVWKPVPGQPLVEDWSYDETFLPHLKPYLEMSREFRESLTH 146
            FVYGSL++ EV++ LL+RVP   P TL  Y R+ +  +VYP ILP  +K V G ++  + + E+ I D FE  +Y++ + ++T+      L     +A+ YVW       L EDW +++  + H+K ++EM++EF E + H
Sbjct:   18 FVYGSLLADEVVQVLLNRVPSSSPATLPDYNRFSIKGRVYPAILPVENKKVLGRVLTGVTNLELDILDIFEDVEYVRDSVEVTIVDNLEKL-----QAYAYVWDNKNDPDLYEDWDFEKWKVAHMKDFIEMTKEFVEEVEH 153          
BLAST of NO17G00180 vs. NCBI_GenBank
Match: XP_021843989.1 (AIG2-like protein D isoform X1 [Spinacia oleracea])

HSP 1 Score: 104.0 bits (258), Expect = 4.200e-19
Identity = 51/141 (36.17%), Postives = 84/141 (59.57%), Query Frame = 0
Query:    5 FVYGSLMSPEVLKELLDRVPVLVPGTLAGYRRWRVPDQVYPGILPDPSKNVEGFLVKELLDSEVQIFDAFEGDDYIKTATKITVSAASPHLPVGEHEAWVYVWKPVPGQPLVEDWSYDETFLPHLKPYLEMSREFRESLTH 146
            FVYGSL++ EV++ LL+RVP   P TL  Y R+ +  +VYP ILP  +K V G ++  + + E+ I D FE  +Y++ + ++T+      L     +A+ YVW       L EDW +++  + H+K ++EM++EF E + H
Sbjct:   20 FVYGSLLADEVVQVLLNRVPSSSPATLPDYNRFSIKGRVYPAILPVENKKVLGRVLTGVTNLELDILDIFEDVEYVRDSVEVTLVDNLEKL-----QAYAYVWDNKNDPDLYEDWDFEKWKVAHMKDFIEMTKEFVEEVEH 155          
BLAST of NO17G00180 vs. NCBI_GenBank
Match: GBG24947.1 (AIG2-like protein D [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 104.0 bits (258), Expect = 4.200e-19
Identity = 57/143 (39.86%), Postives = 75/143 (52.45%), Query Frame = 0
Query:    1 MKLHFVYGSLMSPEVLKELLDRVPVLVPGTLAGYRRWRVPDQVYPGI-LPDPSKNVEGFLVKELLDSEVQIFDAFEGDDYIKTATKITVSAASPHLPVGEHEAWVYVWKPVPGQPLVED-WSYDETFLPHLKPYLEMSREFRE 142
            M + FVYGSLM   VL  ++ R+P   PG L GY R+ + D+VYPGI    P   V G LV +L D E++  D+FE DDY +    I             H A VYVWK      L    W YD+ F+PH++ Y+  S+ F E
Sbjct:    1 MNVVFVYGSLMEERVLSTVVGRMPAFQPGLLLGYTRYAIKDRVYPGIRTTKPDDKVTGLLVSKLSDEEIRRLDSFEDDDYDRVEENIFTENGE------AHRANVYVWKKELEAELKPTLWDYDKDFMPHVEEYVANSKRFAE 137          
BLAST of NO17G00180 vs. NCBI_GenBank
Match: PUZ59229.1 (hypothetical protein GQ55_4G023600 [Panicum hallii var. hallii])

HSP 1 Score: 103.6 bits (257), Expect = 5.400e-19
Identity = 51/139 (36.69%), Postives = 78/139 (56.12%), Query Frame = 0
Query:    5 FVYGSLMSPEVLKELLDRVPVLVPGTLAGYRRWRVPDQVYPGILPDPSKNVEGFLVKELLDSEVQIFDAFEGDDYIKTATKITVSAASPHLPVGEHEAWVYVWKPVPGQPLVEDWSYDETFLPHLKPYLEMSREFRESL 144
            FVYGSLM+ EV++ +L RVP   P  L  Y R+ +  ++YP ILP  SK VEG ++  + D E+Q+ DAFE  +Y +T  +I+++ +S  +      A  YVW       L  +W ++E    H+K +L M+  F   L
Sbjct:   24 FVYGSLMADEVVRAILKRVPPAAPALLPNYHRFNIKGRIYPAILPVESKKVEGMVIMGVTDEELQVLDAFEDVEYTRTRVEISLADSSEKM-----LADTYVWSDAEDSNLYGEWDFEEWKKLHMKDFLAMTNGFMHGL 157          
BLAST of NO17G00180 vs. NCBI_GenBank
Match: XP_017241168.1 (PREDICTED: AIG2-like protein [Daucus carota subsp. sativus])

HSP 1 Score: 102.8 bits (255), Expect = 9.300e-19
Identity = 55/147 (37.41%), Postives = 81/147 (55.10%), Query Frame = 0
Query:    1 MKLH--FVYGSLMSPEVLKELLDRVPVLVPGTLAGYRRWRVPDQVYPGILPDPSKNVEGFLVKELLDSEVQIFDAFEGDDYIKTATKITVSAASPHLPVGEHEAWVYVWKPVPGQPLVEDWSYDETFLPHLKPYLEMSREFRESLTH 146
            M LH  FVYGSL + EV+K LL R+P   P TL  Y R+ + ++VYP ILP   K V G ++ E+ D E+ + DAFE  +Y +    +T+S  S  L V     + YVW+      L  +W  +E    H+K +++M+  F + L H
Sbjct:   14 MGLHNVFVYGSLQAEEVVKVLLKRIPRTSPATLNNYHRFSIKERVYPAILPVADKKVTGKVLSEITDPELLVLDAFEDVEYERQTVDVTLSDTSEKLKV-----FAYVWRNSTDPALYGEWDLEEWKKVHMKDFVKMTMGFAQELEH 155          
The following BLAST results are available for this feature:
BLAST of NO17G00180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM20337.19.800e-6175.50aig2-like protein [Nannochloropsis gaditana][more]
PAN03974.15.800e-2139.57hypothetical protein PAHAL_A00258 [Panicum hallii][more]
PUZ74027.15.800e-2139.57hypothetical protein GQ55_1G032400 [Panicum hallii... [more]
XP_002451522.18.400e-2038.13AIG2-like protein D [Sorghum bicolor] >EES04498.1 ... [more]
XP_004951921.11.900e-1937.41AIG2-like protein D [Setaria italica] >KQL28773.1 ... [more]
KNA25318.12.400e-1936.17hypothetical protein SOVF_007630 [Spinacia olerace... [more]
XP_021843989.14.200e-1936.17AIG2-like protein D isoform X1 [Spinacia oleracea][more]
GBG24947.14.200e-1939.86AIG2-like protein D [Aurantiochytrium sp. FCC1311][more]
PUZ59229.15.400e-1936.69hypothetical protein GQ55_4G023600 [Panicum hallii... [more]
XP_017241168.19.300e-1937.41PREDICTED: AIG2-like protein [Daucus carota subsp.... [more]

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Relationships

The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO17G00180.1NO17G00180.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO17G00180.1NO17G00180.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO17G00180 ID=NO17G00180|Name=NO17G00180|organism=Nannochloropsis oceanica|type=gene|length=1115bp
ATGAAGCTGCACTTCGTCTACGGCTCGCTCATGTCGCCCGAGGTCCTCAA
GGAGCTTCTAGATCGTGTTCCAGTGTTGGTACCGGGCACATTGGCAGGGT
ATCGACGGTGGCGGGTGCCGGACCAAGgtgcgtttgaggggaggtaggga
ggtacagaggggcagatacggaggggcaggtactgaggggaaaagacggg
catctttcacaacagcaaacgtcggaataatatttttggggtatactgca
gtgagtaaggacagtaaccatacattgaagctagattgatgatcacttac
tcacttattcctgcttcctgctccgtccctctcacgcctctcttgccgtc
cccctccacgcggcagTTTATCCGGGCATCCTTCCCGACCCGTCGAAGAA
CGTGGAGGGGTTCCTCGTAAAAGAATTGCTGGACTCGGAGGTGgtacgtc
gtgtcgaaatcaaatgggcagataggtggaagacatgaaatgggtagggc
gcattatccgatgtgcattcgaatatccctctatttcctccctccctccc
tccctccttccttctctgacagCAAATTTTCGACGCCTTTGAAGGGGACG
ACTACATTAAGACCGCCACCAAGATAACTGTCTCGGCAGCCTCGCCGCAT
TTGCCCGTGGGTGAGCACGAGGCATGGGTGTACGTCTGgtacgtttttat
ttgtgtctctatgtcgcgtgtcggtgctacggccatcatggcgcaatcta
ctgggccacgtttccttgagctcttctgtgtctccatgttttgtcttttc
cttttatatcttcatcacgtgacactgattgtgcagagtctctgaggggg
ttcagctaagccgtcgtagtgtgcctcttcccacgcccctcctccgtccc
ctttccatgaagccaagcagtagcagtgcaccccatccacatattaatcc
ctctttccctttctcttctccttgatctcacacagGAAACCTGTGCCGGG
GCAGCCCCTTGTGGAGGACTGGAGCTATGATGAAACTTTTTTACCGCACT
TGAAGCCCTACTTAGAGATGTCAAGAGAATTCAGAGAATCCCTCACGCAC
ATTCCACGCCCTTAG
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protein sequence of NO17G00180.1

>NO17G00180.1-protein ID=NO17G00180.1-protein|Name=NO17G00180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=150bp
MKLHFVYGSLMSPEVLKELLDRVPVLVPGTLAGYRRWRVPDQVYPGILPD
PSKNVEGFLVKELLDSEVQIFDAFEGDDYIKTATKITVSAASPHLPVGEH
EAWVYVWKPVPGQPLVEDWSYDETFLPHLKPYLEMSREFRESLTHIPRP*
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Synonyms
Publications