NO17G00050, NO17G00050 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO17G00050 vs. NCBI_GenBank
Match: XP_008305022.1 (PREDICTED: golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1 [Stegastes partitus]) HSP 1 Score: 72.8 bits (177), Expect = 3.800e-9 Identity = 53/139 (38.13%), Postives = 71/139 (51.08%), Query Frame = 0
Query: 319 ALSMLCSTFLSHLRPLLSLPSFHELWLQLLDVFGPFLSLPVLTSPTLPPSPYLELLPLQEHALEKLKNLLLVMSAAGAFEEGEETIG-RELWDLTWAVAIERFTFCPGLREELFGGVVEEEQGGRVVEGVVVPQEELEP 457
A ++L FL HL PLLSLP+F LWL +LD ++ +S L LE +P E LKN+LLVM AG F + G +LW++TW + F P LREELF V ++ G VP E ++P
Sbjct: 1627 ACTLLSKVFLQHLSPLLSLPTFAALWLTILDFMDKYMHAG--SSDLL-----LEAIP------ESLKNMLLVMDTAGIFHSADSKTGYSDLWEITWERIV---CFLPNLREELFKQTVIQDPGPN------VPAEPVQP 1743
BLAST of NO17G00050 vs. NCBI_GenBank
Match: XP_008305023.1 (PREDICTED: golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X2 [Stegastes partitus]) HSP 1 Score: 72.8 bits (177), Expect = 3.800e-9 Identity = 53/139 (38.13%), Postives = 71/139 (51.08%), Query Frame = 0
Query: 319 ALSMLCSTFLSHLRPLLSLPSFHELWLQLLDVFGPFLSLPVLTSPTLPPSPYLELLPLQEHALEKLKNLLLVMSAAGAFEEGEETIG-RELWDLTWAVAIERFTFCPGLREELFGGVVEEEQGGRVVEGVVVPQEELEP 457
A ++L FL HL PLLSLP+F LWL +LD ++ +S L LE +P E LKN+LLVM AG F + G +LW++TW + F P LREELF V ++ G VP E ++P
Sbjct: 1623 ACTLLSKVFLQHLSPLLSLPTFAALWLTILDFMDKYMHAG--SSDLL-----LEAIP------ESLKNMLLVMDTAGIFHSADSKTGYSDLWEITWERIV---CFLPNLREELFKQTVIQDPGPN------VPAEPVQP 1739
BLAST of NO17G00050 vs. NCBI_GenBank
Match: XP_017318956.1 (PREDICTED: Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1 [Ictalurus punctatus] >XP_017318957.1 PREDICTED: Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1 [Ictalurus punctatus]) HSP 1 Score: 71.2 bits (173), Expect = 1.100e-8 Identity = 56/144 (38.89%), Postives = 71/144 (49.31%), Query Frame = 0
Query: 319 ALSMLCSTFLSHLRPLLSLPSFHELWLQLLDVFGPFLSLPVLTSPTLPPSPYLELLPLQEHALEKLKNLLLVMSAAGAFEEGEETIG-RELWDLTWAVAIERF-TFCPGLREELFGGVVEEEQGGRVVEGVVVPQEELEPTPTA 461
A ++L FL HL PLLSLP+F LWL +LD ++ +S L LE +P E LKN+LLVM AG F + G +LW++TW ER F P LREELF V E P +EP PT+
Sbjct: 1609 ACTLLSKVFLQHLSPLLSLPTFAALWLTILDFMDKYMHAG--SSDLL-----LEAIP------ESLKNMLLVMDTAGIFHSADSRTGYSDLWEITW----ERIDCFLPHLREELFKQAVMPEP---------APNVPVEPAPTS 1726
BLAST of NO17G00050 vs. NCBI_GenBank
Match: XP_017318958.1 (PREDICTED: Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X2 [Ictalurus punctatus]) HSP 1 Score: 71.2 bits (173), Expect = 1.100e-8 Identity = 56/144 (38.89%), Postives = 71/144 (49.31%), Query Frame = 0
Query: 319 ALSMLCSTFLSHLRPLLSLPSFHELWLQLLDVFGPFLSLPVLTSPTLPPSPYLELLPLQEHALEKLKNLLLVMSAAGAFEEGEETIG-RELWDLTWAVAIERF-TFCPGLREELFGGVVEEEQGGRVVEGVVVPQEELEPTPTA 461
A ++L FL HL PLLSLP+F LWL +LD ++ +S L LE +P E LKN+LLVM AG F + G +LW++TW ER F P LREELF V E P +EP PT+
Sbjct: 1605 ACTLLSKVFLQHLSPLLSLPTFAALWLTILDFMDKYMHAG--SSDLL-----LEAIP------ESLKNMLLVMDTAGIFHSADSRTGYSDLWEITW----ERIDCFLPHLREELFKQAVMPEP---------APNVPVEPAPTS 1722
BLAST of NO17G00050 vs. NCBI_GenBank
Match: PIK45929.1 (putative golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X2 [Apostichopus japonicus]) HSP 1 Score: 71.2 bits (173), Expect = 1.100e-8 Identity = 48/115 (41.74%), Postives = 63/115 (54.78%), Query Frame = 0
Query: 319 ALSMLCSTFLSHLRPLLSLPSFHELWLQLLDVFGPFLSLPVLTSPTLPPSPYLELLPLQEHALEKLKNLLLVMSAAGAFE-EGEETIGRELWDLTWAVAIERF-TFCPGLREELF 432
A S+LC FL HL PLLSL +F LW+ +LD +++ + EL L E E LKN+LLVM AG FE +GE+ +LW +TW ER F PGL+ E+F
Sbjct: 95 AASLLCKGFLQHLTPLLSLSTFTALWMTILDFMDKYMN-----------ADKSEL--LSEAIPESLKNMLLVMHTAGVFETDGEDDPAAQLWAMTW----ERIDCFLPGLKTEVF 192
BLAST of NO17G00050 vs. NCBI_GenBank
Match: XP_022540542.1 (Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X2 [Astyanax mexicanus]) HSP 1 Score: 70.9 bits (172), Expect = 1.400e-8 Identity = 56/143 (39.16%), Postives = 71/143 (49.65%), Query Frame = 0
Query: 319 ALSMLCSTFLSHLRPLLSLPSFHELWLQLLDVFGPFLSLPVLTSPTLPPSPYLELLPLQEHALEKLKNLLLVMSAAGAFEEGEETIG-RELWDLTWAVAIERF-TFCPGLREELFGGVVEEEQGGRVVEGVVVPQEELEPTPT 460
A ++L FL HL PLLSLP+F LWL +LD ++ +S L LE +P E LKN+LLVM AG F + G +LW++TW ER F P LREELF V E VP +EP P+
Sbjct: 1641 ACTLLSKVFLQHLSPLLSLPTFAALWLTILDFMDKYMHAG--SSDLL-----LEAIP------ESLKNMLLVMDTAGIFHSADSRTGYSDLWEITW----ERIDCFLPRLREELFKQAVMPEP---------VPNVPVEPAPS 1757
BLAST of NO17G00050 vs. NCBI_GenBank
Match: XP_007240413.2 (Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X3 [Astyanax mexicanus]) HSP 1 Score: 70.9 bits (172), Expect = 1.400e-8 Identity = 56/143 (39.16%), Postives = 71/143 (49.65%), Query Frame = 0
Query: 319 ALSMLCSTFLSHLRPLLSLPSFHELWLQLLDVFGPFLSLPVLTSPTLPPSPYLELLPLQEHALEKLKNLLLVMSAAGAFEEGEETIG-RELWDLTWAVAIERF-TFCPGLREELFGGVVEEEQGGRVVEGVVVPQEELEPTPT 460
A ++L FL HL PLLSLP+F LWL +LD ++ +S L LE +P E LKN+LLVM AG F + G +LW++TW ER F P LREELF V E VP +EP P+
Sbjct: 1630 ACTLLSKVFLQHLSPLLSLPTFAALWLTILDFMDKYMHAG--SSDLL-----LEAIP------ESLKNMLLVMDTAGIFHSADSRTGYSDLWEITW----ERIDCFLPRLREELFKQAVMPEP---------VPNVPVEPAPS 1746
BLAST of NO17G00050 vs. NCBI_GenBank
Match: XP_007240415.2 (Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X4 [Astyanax mexicanus]) HSP 1 Score: 70.9 bits (172), Expect = 1.400e-8 Identity = 56/143 (39.16%), Postives = 71/143 (49.65%), Query Frame = 0
Query: 319 ALSMLCSTFLSHLRPLLSLPSFHELWLQLLDVFGPFLSLPVLTSPTLPPSPYLELLPLQEHALEKLKNLLLVMSAAGAFEEGEETIG-RELWDLTWAVAIERF-TFCPGLREELFGGVVEEEQGGRVVEGVVVPQEELEPTPT 460
A ++L FL HL PLLSLP+F LWL +LD ++ +S L LE +P E LKN+LLVM AG F + G +LW++TW ER F P LREELF V E VP +EP P+
Sbjct: 1618 ACTLLSKVFLQHLSPLLSLPTFAALWLTILDFMDKYMHAG--SSDLL-----LEAIP------ESLKNMLLVMDTAGIFHSADSRTGYSDLWEITW----ERIDCFLPRLREELFKQAVMPEP---------VPNVPVEPAPS 1734
BLAST of NO17G00050 vs. NCBI_GenBank
Match: XP_022540541.1 (Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1 [Astyanax mexicanus]) HSP 1 Score: 70.9 bits (172), Expect = 1.400e-8 Identity = 56/143 (39.16%), Postives = 71/143 (49.65%), Query Frame = 0
Query: 319 ALSMLCSTFLSHLRPLLSLPSFHELWLQLLDVFGPFLSLPVLTSPTLPPSPYLELLPLQEHALEKLKNLLLVMSAAGAFEEGEETIG-RELWDLTWAVAIERF-TFCPGLREELFGGVVEEEQGGRVVEGVVVPQEELEPTPT 460
A ++L FL HL PLLSLP+F LWL +LD ++ +S L LE +P E LKN+LLVM AG F + G +LW++TW ER F P LREELF V E VP +EP P+
Sbjct: 1645 ACTLLSKVFLQHLSPLLSLPTFAALWLTILDFMDKYMHAG--SSDLL-----LEAIP------ESLKNMLLVMDTAGIFHSADSRTGYSDLWEITW----ERIDCFLPRLREELFKQAVMPEP---------VPNVPVEPAPS 1761
BLAST of NO17G00050 vs. NCBI_GenBank
Match: XP_017580198.1 (PREDICTED: Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 isoform X1 [Pygocentrus nattereri]) HSP 1 Score: 70.5 bits (171), Expect = 1.900e-8 Identity = 56/142 (39.44%), Postives = 70/142 (49.30%), Query Frame = 0
Query: 319 ALSMLCSTFLSHLRPLLSLPSFHELWLQLLDVFGPFLSLPVLTSPTLPPSPYLELLPLQEHALEKLKNLLLVMSAAGAFEEGEETIG-RELWDLTWAVAIERF-TFCPGLREELFGGVVEEEQGGRVVEGVVVPQEELEPTP 459
A ++L FL HL PLLSLP+F LWL +LD ++ +S L LE +P E LKN+LLVM AG F + G +LW++TW ER F P LREELF V E VP +EP P
Sbjct: 1657 ACTLLSKVFLQHLSPLLSLPTFAALWLTILDFMDKYMHAG--SSDLL-----LEAIP------ESLKNMLLVMDTAGIFHSADSRTGYSDLWEITW----ERIDCFLPRLREELFKQAVIPEP---------VPSVSVEPAP 1772 The following BLAST results are available for this feature:
BLAST of NO17G00050 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G00050 ID=NO17G00050|Name=NO17G00050|organism=Nannochloropsis oceanica|type=gene|length=1771bpback to top protein sequence of NO17G00050.1 >NO17G00050.1-protein ID=NO17G00050.1-protein|Name=NO17G00050.1|organism=Nannochloropsis oceanica|type=polypeptide|length=554bpback to top Synonyms
Publications
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