NO17G00030, NO17G00030 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO17G00030 vs. NCBI_GenBank
Match: OQR92809.1 (hypothetical protein ACHHYP_03184 [Achlya hypogyna]) HSP 1 Score: 101.3 bits (251), Expect = 3.300e-18 Identity = 49/131 (37.40%), Postives = 74/131 (56.49%), Query Frame = 0
Query: 41 VGMNVELPHTFVHADVKMFAALSGDDNPIHLDTDYAIKQGMFSGTIVHGLLVXXXXXXXXXXXFPGSVYLQQGFKFSRPVYVGKPVTALVEVTRRREREESNPPSTILFCSTHVYDDEGFCAVAGEAVVML 172
VG+ E+ HTF ADV FA L+GD NP+HLD D+ +F +VHG+L PG VY+ Q +F +P++VG P+ +EVT +ER +L C+T ++ +G A++GEA V++
Sbjct: 29 VGVGAEIHHTFTPADVAAFATLTGDTNPLHLDADFCATT-VFKRPVVHGILCSALFPTVFGATIPGCVYVSQNLRFHKPIFVGDPLKIRIEVTEVKERVR------LLTCATECFNADGEVAISGEAKVLI 152
BLAST of NO17G00030 vs. NCBI_GenBank
Match: OQR89965.1 (MaoClike domain containing protein [Thraustotheca clavata]) HSP 1 Score: 99.4 bits (246), Expect = 1.300e-17 Identity = 49/132 (37.12%), Postives = 74/132 (56.06%), Query Frame = 0
Query: 41 VGMNVELPHTFVHADVKMFAALSGDDNPIHLDTDYAIKQGMFSGTIVHGLLVXXXXXXXXXXXFPGSVYLQQGFKFSRPVYVGKPVTALVEVTRRREREESNPPSTILFCSTHVYDDEGFCAVAGEAVVMLP 173
VG E+ HTF DV+ FA L+GD NP+HLD + K F IVHG+L PGS+Y+ Q +F +P+YV +P+ +EVT+ +ER ++ C+T ++ +G A+ G+A V+LP
Sbjct: 26 VGTCAEIHHTFTSNDVENFAQLTGDTNPLHLDPIFCTKT-QFKKPIVHGILCTSLFPTIFGATLPGSIYVSQSIRFKKPIYVNEPLQIRIEVTQVKER------MRLVICNTECFNAQGEVAITGQANVLLP 150
BLAST of NO17G00030 vs. NCBI_GenBank
Match: XP_002108386.1 (hypothetical protein TRIADDRAFT_52813 [Trichoplax adhaerens] >EDV29184.1 hypothetical protein TRIADDRAFT_52813 [Trichoplax adhaerens]) HSP 1 Score: 99.0 bits (245), Expect = 1.700e-17 Identity = 51/136 (37.50%), Postives = 77/136 (56.62%), Query Frame = 0
Query: 39 IEVGMNVELPHTFVHADVKMFAALSGDDNPIHLDTDYAIKQGMFSGTIVHGLLVXXXXXXXXXXXFP--GSVYLQQGFKFSRPVYVGKPVTALVEVTRRREREESNPPSTILFCSTHVYDDEGFCAVAGEAVVMLP 173
+ +G +VE+ +F H DVK+FA LSGD+NP+HLD DYA K F IVHGLL+ P G++Y+ Q +F P+Y+ + VTALV+++ R ST+ T + ++G+A+VM+P
Sbjct: 46 LSIGQSVEITRSFSHNDVKLFAQLSGDNNPLHLDPDYA-KNTQFGRCIVHGLLINGLLSALLGTKLPGYGTIYVSQDIRFHSPLYIDEEVTALVQISNIRR-------STVYAALTCTAKERNEVVLSGQAIVMIP 173
BLAST of NO17G00030 vs. NCBI_GenBank
Match: PJF44240.1 (enoyl-CoA hydratase [Chloroflexi bacterium]) HSP 1 Score: 96.3 bits (238), Expect = 1.100e-16 Identity = 52/135 (38.52%), Postives = 72/135 (53.33%), Query Frame = 0
Query: 40 EVGMNVELPHTFVHADVKMFAALSGDDNPIHLDTDYAIKQGMFSGTIVHGLLVXXXXXXXXXXXF--PGSVYLQQGFKFSRPVYVGKPVTALVEVTRRREREESNPPSTILFCSTHVYDDEGFCAVAGEAVVMLP 173
E+G + TF DV++FA L GD NPIHLD +YA KQ +F +VHG+L F PGS+YL Q KF++PV++G +TA V VT R P I+ T + G + G+AV++ P
Sbjct: 4 EIGQSASRTKTFTDEDVRIFAELCGDTNPIHLDDEYA-KQSVFGQRVVHGMLTASLISALLANDFPGPGSIYLSQNLKFTKPVFIGDTITATVTVTGFR------PEKRIVSLETICTNQHGEKVIQGDAVILAP 131
BLAST of NO17G00030 vs. NCBI_GenBank
Match: XP_008616245.1 (hypothetical protein SDRG_11968 [Saprolegnia diclina VS20] >EQC30392.1 hypothetical protein SDRG_11968 [Saprolegnia diclina VS20]) HSP 1 Score: 95.9 bits (237), Expect = 1.400e-16 Identity = 48/131 (36.64%), Postives = 73/131 (55.73%), Query Frame = 0
Query: 41 VGMNVELPHTFVHADVKMFAALSGDDNPIHLDTDYAIKQGMFSGTIVHGLLVXXXXXXXXXXXFPGSVYLQQGFKFSRPVYVGKPVTALVEVTRRREREESNPPSTILFCSTHVYDDEGFCAVAGEAVVML 172
VG+ E+ HTF DV+ FA L+GD NP+HLD + F +VHG+LV PGSVY+ Q +F +P++V P+T +EVT+ + R ++ C+T + EG A++GEA V++
Sbjct: 69 VGVGAEIHHTFHAHDVQAFATLTGDTNPLHLDASFCATT-PFGKPVVHGILVSSLFPSVFGATMPGSVYVSQSLRFHKPIFVDDPLTIRIEVTQVKAR------MRLVVCATQCINKEGEIAISGEAKVLI 192
BLAST of NO17G00030 vs. NCBI_GenBank
Match: XP_012198776.1 (hypothetical protein SPRG_04462 [Saprolegnia parasitica CBS 223.65] >KDO30561.1 hypothetical protein SPRG_04462 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 95.9 bits (237), Expect = 1.400e-16 Identity = 47/132 (35.61%), Postives = 74/132 (56.06%), Query Frame = 0
Query: 40 EVGMNVELPHTFVHADVKMFAALSGDDNPIHLDTDYAIKQGMFSGTIVHGLLVXXXXXXXXXXXFPGSVYLQQGFKFSRPVYVGKPVTALVEVTRRREREESNPPSTILFCSTHVYDDEGFCAVAGEAVVML 172
++G+ E+ HTF DV+ FA L+GD NP+HLD + F +VHG+LV PGSVY+ Q +F +P++V P+T +EVT+ + R ++ C+T + EG A++GEA V++
Sbjct: 34 DIGVGAEIHHTFHAHDVEAFATLTGDTNPLHLDPTFCATT-PFGKPVVHGILVSSLFPTVFGATMPGSVYVSQSLRFHKPIFVNDPLTIRIEVTQVKAR------MRLVVCATQCVNKEGEIAISGEAKVLI 158
BLAST of NO17G00030 vs. NCBI_GenBank
Match: WP_078922429.1 (enoyl-CoA hydratase [Thiothrix eikelboomii] >SKA79241.1 3-hydroxybutyryl-CoA dehydratase [Thiothrix eikelboomii]) HSP 1 Score: 95.1 bits (235), Expect = 2.400e-16 Identity = 53/139 (38.13%), Postives = 74/139 (53.24%), Query Frame = 0
Query: 39 IEVGMNVELPHTFVHADVKMFAALSGDDNPIHLDTDYAIKQGMFSGTIVHGLLVXXXXXXXXXXXFPGS--VYLQQGFKFSRPVYVGKPVTALVEVTRRREREESNPPSTILFCSTHVYDDEGFCAVAGEAVVMLPFIQ 176
I+VG F DV+ FA L+GD NP+HLD ++A F IVHG+LV PGS +Y+ Q F PVY+ + VTA VEVT+ RE + I+ T+V D EG V G+AV+ +P+++
Sbjct: 5 IQVGDQASRQRRFTEVDVQQFADLTGDHNPVHLDAEFAAST-QFKAQIVHGMLVGSLFTGILGEDLPGSGAIYMSQNLSFKAPVYLNQTVTATVEVTQIREGK------GIVSLDTYVTDQEGKVLVKGDAVLFVPWLK 136
BLAST of NO17G00030 vs. NCBI_GenBank
Match: WP_088572536.1 (enoyl-CoA hydratase [Thermoflexus hugenholtzii] >SNB76373.1 3-hydroxybutyryl-CoA dehydratase [Thermoflexus hugenholtzii JAD2]) HSP 1 Score: 93.6 bits (231), Expect = 7.000e-16 Identity = 52/138 (37.68%), Postives = 74/138 (53.62%), Query Frame = 0
Query: 37 LRIEVGMNVELPHTFVHADVKMFAALSGDDNPIHLDTDYAIKQGMFSGTIVHGLLVXXXXXXXXXXXF--PGSVYLQQGFKFSRPVYVGKPVTALVEVTRRREREESNPPSTILFCSTHVYDDEGFCAVAGEAVVMLP 173
+ + +G T ADV+ FAAL+GDDNP+HLD ++A + F I HG+LV PG++YL+Q +F RPVY+G VTA+VEV R RE ++ +T + G + GEAVV+ P
Sbjct: 2 VELRIGATASWTKTITRADVEAFAALTGDDNPLHLDEEFA-RNTRFGRPIAHGMLVAGLISAVLGRILPGPGTIYLRQTLEFLRPVYLGDTVTAVVEVVRIRE------DKPVITLATRCLNQHGEEVLRGEAVVLAP 132
BLAST of NO17G00030 vs. NCBI_GenBank
Match: XP_009833019.1 (hypothetical protein H257_08693 [Aphanomyces astaci] >ETV77232.1 hypothetical protein H257_08693 [Aphanomyces astaci]) HSP 1 Score: 92.4 bits (228), Expect = 1.600e-15 Identity = 47/133 (35.34%), Postives = 73/133 (54.89%), Query Frame = 0
Query: 40 EVGMNVELPHTFVHADVKMFAALSGDDNPIHLDTDYAIKQGMFSGTIVHGLLVXXXXXXXXXXXFPGSVYLQQGFKFSRPVYVGKPVTALVEVTRRREREESNPPSTILFCSTHVYDDEGFCAVAGEAVVMLP 173
E G+ + H F ADV+ FAALSGD NP+H+D +A F +VHG+L FPG++Y+ Q ++ +P++VG V A +EV + + R ++ C+T D G A++G+A V+LP
Sbjct: 27 EEGVTASIDHVFHAADVETFAALSGDSNPLHVDAAFAATT-TFGKPVVHGILCTSLFPTIFGATFPGAIYVAQDVRYHKPIHVGDLVHAEIEVLQVKAR------MRLVVCATRCLDRHGDVAISGQAKVLLP 152
BLAST of NO17G00030 vs. NCBI_GenBank
Match: PID49969.1 (enoyl-CoA hydratase [Proteobacteria bacterium]) HSP 1 Score: 92.4 bits (228), Expect = 1.600e-15 Identity = 51/139 (36.69%), Postives = 76/139 (54.68%), Query Frame = 0
Query: 39 IEVGMNVELPHTFVHADVKMFAALSGDDNPIHLDTDYAIKQGMFSGTIVHGLLVXXXXXXXXXXXFP--GSVYLQQGFKFSRPVYVGKPVTALVEVTRRREREESNPPSTILFCSTHVYDDEGFCAVAGEAVVMLPFIQ 176
+++G + L +F DV+++A LSGD NP+HLD D+A F IVHG+LV P GS+Y+ Q F PVY+ + VTA VEVT E+ I+ +T V D +G V GEA++ +P+++
Sbjct: 5 VKLGESASLTRSFSEQDVQLYADLSGDHNPVHLDADFAAAT-QFGQRIVHGMLVGSLFTALLGEELPGRGSIYMTQNLTFKAPVYLDQVVTAKVEVTAIHEKR------PIVTLATTVVDQDGKTLVQGEAIMYVPWLK 136 The following BLAST results are available for this feature:
BLAST of NO17G00030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO17G00030 ID=NO17G00030|Name=NO17G00030|organism=Nannochloropsis oceanica|type=gene|length=1967bpback to top protein sequence of NO17G00030.1 >NO17G00030.1-protein ID=NO17G00030.1-protein|Name=NO17G00030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=263bpback to top protein sequence of NO17G00030.2 >NO17G00030.2-protein ID=NO17G00030.2-protein|Name=NO17G00030.2|organism=Nannochloropsis oceanica|type=polypeptide|length=186bpback to top protein sequence of NO17G00030.3 >NO17G00030.3-protein ID=NO17G00030.3-protein|Name=NO17G00030.3|organism=Nannochloropsis oceanica|type=polypeptide|length=279bpback to top protein sequence of NO17G00030.4 >NO17G00030.4-protein ID=NO17G00030.4-protein|Name=NO17G00030.4|organism=Nannochloropsis oceanica|type=polypeptide|length=190bpback to top protein sequence of NO17G00030.5 >NO17G00030.5-protein ID=NO17G00030.5-protein|Name=NO17G00030.5|organism=Nannochloropsis oceanica|type=polypeptide|length=223bpback to top Synonyms
Publications
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