NO16G03220, NO16G03220 (gene) Nannochloropsis oceanica

Overview
NameNO16G03220
Unique NameNO16G03220
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1171
Alignment locationchr16:963499..964669 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:963499..964669 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO16G03220 vs. NCBI_GenBank
Match: EWM23781.1 (hypothetical protein Naga_100330g3 [Nannochloropsis gaditana])

HSP 1 Score: 334.0 bits (855), Expect = 5.400e-88
Identity = 169/232 (72.84%), Postives = 187/232 (80.60%), Query Frame = 0
Query:   82 RASVLRRYAYAKGRPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYRPVGPVELDAAWEVCESLENELLLPARXXXXXXXXXXXXXXXXXXXXXAEGALAEAAPVAETTIEEGKKDAVVLPALRAQWEQTRQSFEEDDWEKKPIWDLPVLSYVYDCTGDRGLAKK 314
            R+ +LRR+AYAKGRPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYRPV PVELD+AWEVC +LE E L  A                       E   A A+ + E   +EG +    +P+LRA+WE+ R+SFEE+DWEKKPIW+LPVL+YVY+CTGDRGLAKK
Sbjct:   74 RSDLLRRHAYAKGRPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYRPVQPVELDSAWEVCVALEEEFLSAA-----------------ASAVSQEDGTANASSLGE---QEGSE----VPSLRAKWERMRESFEEEDWEKKPIWELPVLAYVYNCTGDRGLAKK 281          
BLAST of NO16G03220 vs. NCBI_GenBank
Match: CBJ48324.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 162.5 bits (410), Expect = 2.200e-36
Identity = 83/127 (65.35%), Postives = 93/127 (73.23%), Query Frame = 0
Query:   93 KGRPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYRPVGPVELDAAWEVCESLENELLLP 220
            +GRPSLDDVERLS GQAAKKRGTGSR +CHRLNE ERK +DLAKK G+V LRGTGYRRERKGSPL NI RQ CDA   PC  V  G G DAVDEV +D SP R    V +D+  E  +++  EL  P
Sbjct:   65 RGRPSLDDVERLSRGQAAKKRGTGSRGVCHRLNESERKAYDLAKKQGYVVLRGTGYRRERKGSPLQNIFRQFCDAKAMPCTSVLTGQGPDAVDEVEIDFSPLRTSREV-MDSLSEQADAVAAELEAP 190          
BLAST of NO16G03220 vs. NCBI_GenBank
Match: CEM03333.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 132.9 bits (333), Expect = 1.800e-27
Identity = 67/108 (62.04%), Postives = 81/108 (75.00%), Query Frame = 0
Query:   90 AYAKGRPSLDDVERLSHGQAA--KKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYR 196
            A A GR +LDDVER+S GQAA  K+RGTGSRN+ HRLN+ ERK +D+AK   ++   G+ YRRERKGSPLANI+RQ CDA   PCI + +GLG +  D VVVDLSP R
Sbjct:   68 ARAPGRAALDDVERISRGQAARKKRRGTGSRNVPHRLNQEERKLYDIAKGRRYLVTSGSAYRRERKGSPLANIYRQWCDAQATPCINIQKGLGPEGSDLVVVDLSPLR 175          
BLAST of NO16G03220 vs. NCBI_GenBank
Match: PRW39173.1 (sodium phosphate symporter [Chlorella sorokiniana])

HSP 1 Score: 124.8 bits (312), Expect = 5.000e-25
Identity = 66/121 (54.55%), Postives = 82/121 (67.77%), Query Frame = 0
Query:   95 RPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYRPVGPVELDAAWEVCESLENE 216
            RPSLDDV+R+S G AAK RGTGSR + HRLN  ERK +DLAK+ GF+ + G+GYRRERKGSPLANI RQ CDA GRP + + +  G    D V+VD S  R     ++D A   C S+  +
Sbjct:  563 RPSLDDVQRISTGDAAKHRGTGSRAVPHRLNAEERKAYDLAKQKGFLTIAGSGYRRERKGSPLANIWRQWCDAQGRPAVLLTK--GPTGEDAVLVDYSTLR---QADVDQARAACRSIAQQ 678          
BLAST of NO16G03220 vs. NCBI_GenBank
Match: GAX82752.1 (hypothetical protein CEUSTIGMA_g10178.t1 [Chlamydomonas eustigma])

HSP 1 Score: 119.4 bits (298), Expect = 2.100e-23
Identity = 58/101 (57.43%), Postives = 71/101 (70.30%), Query Frame = 0
Query:   95 RPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYR 196
            RP +DDV+RLS G+ AK RGTG R+I HRLNE E   F  AKK GF  +RGTGYR+ERKG+PL NI RQ CDA   PCI + + +   + D +VVDL+P R
Sbjct:   27 RPHVDDVDRLSRGEGAKIRGTGCRDIPHRLNEQEHAGFKAAKKKGFAAVRGTGYRKERKGNPLPNIFRQWCDAKEMPCIVIEQDMLGGSRDNIVVDLTPMR 127          
BLAST of NO16G03220 vs. NCBI_GenBank
Match: XP_002180196.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48387.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 119.0 bits (297), Expect = 2.800e-23
Identity = 85/234 (36.32%), Postives = 108/234 (46.15%), Query Frame = 0
Query:   95 RPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRP-CIEVHRGLGTDAVDEVVVDLSPYRPVG----PVELD---AAWEVCESLENELLLPARXXXXXXXXXXXXXXXXXXXXXAEGALAEAAPVAETTIEEGKKDAVVLPALRAQWEQTRQSFEEDDWEKKPIWDLPVLSYVYDCTGDRGLAKKIAQEAHA 321
            R S DDVERLS GQ +KK+G GSRN+ HRLN+ ER E D A K GFV   GTG RR RKGSPLANIHRQ CDA  +P  +      G   +D+V+VDLSP R  G    P  +D   A W+                                   +   +      ++   +E   D  +        +        + W  KPIW LPV+S+     GDR  AK +A+E  A
Sbjct:  199 RISRDDVERLSRGQPSKKKGYGSRNVPHRLNDEERAEMDRAAKKGFVSFAGTGNRRTRKGSPLANIHRQWCDARDKPQILHFKASGGRQPLDQVIVDLSPLRLNGLFDDPSRVDDFLAKWKA----------------------------DIATAASNSGMQIYTRTSDVDADENDLDEDIATDYLVTLDHHAVM---EAWATKPIWKLPVVSFAV-FEGDRPRAKAMAKELAA 400          
BLAST of NO16G03220 vs. NCBI_GenBank
Match: KOO31105.1 (hypothetical protein Ctob_008662, partial [Chrysochromulina sp. CCMP291])

HSP 1 Score: 115.9 bits (289), Expect = 2.300e-22
Identity = 61/129 (47.29%), Postives = 88/129 (68.22%), Query Frame = 0
Query:   82 RASVLRRYAYAKGRPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGL-GTDAVDEVVVDLSPYRPVGPVELDAAWEVC 210
            + +V R ++    RP++DDV+R+S G+ AK++GTGSR + HRLN+ ER  +D A++ GFV++ G+G+R ER+ SPL N  R  CDA G P I +H+G  GTD  D+VVVDL+P R   P+  +AA   C
Sbjct:  100 QGTVPRPFSRDCWRPTIDDVDRISWGRNAKQKGTGSRGVPHRLNDDERSLYDFARRKGFVEIGGSGWRSERRDSPLVNTFRSWCDARGVPAIYLHKGRDGTD--DQVVVDLAPLRT--PLRFEAAAAFC 224          
BLAST of NO16G03220 vs. NCBI_GenBank
Match: PNW72006.1 (hypothetical protein CHLRE_16g686350v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 112.1 bits (279), Expect = 3.400e-21
Identity = 57/113 (50.44%), Postives = 77/113 (68.14%), Query Frame = 0
Query:   95 RPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAV--DEVVVDLSPYRPVGPVELDAA 206
            RPS+DD++ +S G  AK RGTGSR I HRLN  ER  +D+AKK G+V +RGT YR+ER G+PL N++RQ CDA  + C+ V +     A   D+VVVDL+P R     +++AA
Sbjct:   78 RPSIDDIDSISWGGRAKVRGTGSRKIPHRLNAEERGLYDMAKKKGYVAVRGTAYRKERHGNPLPNVYRQWCDAKAQLCVVVEQDRTGSAPGGDQVVVDLAPLRREATEQVEAA 190          
BLAST of NO16G03220 vs. NCBI_GenBank
Match: PSC72005.1 (S15 RNA-binding [Micractinium conductrix])

HSP 1 Score: 112.1 bits (279), Expect = 3.400e-21
Identity = 55/98 (56.12%), Postives = 70/98 (71.43%), Query Frame = 0
Query:   98 LDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYR 196
            ++DV+R+S G AA+ RGTGSR + HRLN  ER  F++A+K   + L G+GYRRERKGSPLAN+ RQ CDA G PC+ V +G    A D V+VDLS  R
Sbjct:    1 MEDVQRISRGDAARARGTGSRAVPHRLNAEERAAFEVARKKWVLALAGSGYRRERKGSPLANLWRQWCDAAGMPCVLVCKGATAAAGDTVLVDLSTLR 98          
BLAST of NO16G03220 vs. NCBI_GenBank
Match: GAX21630.1 (hypothetical protein FisN_29Hu067 [Fistulifera solaris])

HSP 1 Score: 109.4 bits (272), Expect = 2.200e-20
Identity = 52/101 (51.49%), Postives = 73/101 (72.28%), Query Frame = 0
Query:   95 RPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYR 196
            RP   DVER+S G+ AK++GTGSR + HRLN  ER  F+ A++ GF+++ G+G+R ER+ +PL N HR  CDA G+ C+ +H+GL + AVD  V+DLSP R
Sbjct:   34 RPDKQDVERISWGKPAKQKGTGSRGVPHRLNSDERVLFEQARRKGFLEVVGSGWRSERREAPLLNTHRSWCDARGQACLRLHKGL-SGAVDTFVLDLSPLR 133          
The following BLAST results are available for this feature:
BLAST of NO16G03220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23781.15.400e-8872.84hypothetical protein Naga_100330g3 [Nannochloropsi... [more]
CBJ48324.12.200e-3665.35conserved unknown protein [Ectocarpus siliculosus][more]
CEM03333.11.800e-2762.04unnamed protein product [Vitrella brassicaformis C... [more]
PRW39173.15.000e-2554.55sodium phosphate symporter [Chlorella sorokiniana][more]
GAX82752.12.100e-2357.43hypothetical protein CEUSTIGMA_g10178.t1 [Chlamydo... [more]
XP_002180196.12.800e-2336.32predicted protein [Phaeodactylum tricornutum CCAP ... [more]
KOO31105.12.300e-2247.29hypothetical protein Ctob_008662, partial [Chrysoc... [more]
PNW72006.13.400e-2150.44hypothetical protein CHLRE_16g686350v5 [Chlamydomo... [more]
PSC72005.13.400e-2156.12S15 RNA-binding [Micractinium conductrix][more]
GAX21630.12.200e-2051.49hypothetical protein FisN_29Hu067 [Fistulifera sol... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL155nonsL155Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR032ngnoR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007534NSK007534Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G03220.1NO16G03220.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100330g3gene6680Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G03220.1NO16G03220.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G03220 ID=NO16G03220|Name=NO16G03220|organism=Nannochloropsis oceanica|type=gene|length=1171bp
GGCCATTTTCTGTCGTTACCACACAACAAATACCCCTCTCAAACATCTTT
TCCTCTCACTCCTCCACAACACAGCTCTTCGAAGATAGAGATGTGTGCTC
TGCCTGGGCGCCGCCGCCTCCAGTTCCTCGGTACATTGGCTGCAACCCTC
CTCCTTTCCACCACGGCTGCATCATGTGCTTCTTCGATGCGTCCCGCCAT
GGCCCGGAGTACCTTCACCGCCTTTTTGTCGCCCATCCTTCCCCCCCACA
CAGTCCCAACAATCCGTGGCGCTGTTTCCTTCTCTTCATCATCCACCTCC
TCCTTCTCCTCCTCCTCCTCCACTCAGAACGATAGGGCCAGTGTGCTCCG
CCGGTATGCCTACGCCAAAGGCCGTCCCAGCCTCGATGACGTGGAACGTC
TCTCACACGGGCAAGCCGCCAAGAAACGCGGCACGGGCTCCCGCAACATT
TGCCACCGTCTCAATGAGATGGAACGCAAGGAATTTGACCTTGCCAAGAA
GATGGGTTTTGTCCAGTTGCGGGGCACGGGCTACCGCCGGGAGCGGAAAG
GCAGCCCGCTTGCCAACATCCACCGGCAGCTCTGCGACGCGCTGGGCCGC
CCTTGCATCGAGGTGCACCGTGGCCTGGGCACAGATGCTGTGGATGAGGT
AGTCGTAGACCTGTCTCCCTACCGGCCCGTGGGGCCCGTGGAGCTGGATG
CAGCATGGGAGGTGTGTGAGAGTTTGGAAAATGAGTTGCTGCTTCCAGCT
AGAAAGTCTTCGGCCACTGCTGATGATGCTGCTGTTGTTGCCGCGGCTGC
TGCTACTCCGACTGTGGCAGAGGGAGCACTTGCAGAGGCAGCACCGGTAG
CAGAGACGACGATCGAGGAAGGGAAGAAAGACGCGGTGGTGTTACCAGCA
TTGCGTGCACAGTGGGAACAGACACGACAGAGCTTCGAGGAGGACGACTG
GGAGAAGAAGCCCATCTGGGACTTACCCGTCTTGTCCTACGTCTATGACT
GCACTGGGGATAGAGGTCTGGCGAAGAAAATCGCACAGGAGGCCCACGCT
CGCCTGGGCAAGCTGAAGCGCAAGAGGTGATGCATTAGGAGGAAGGAATT
GGAGGCGAGGGGAAGCGGACACATGTAATATAGATTGACGGGGAAAAAAT
AATGTATGCTCAGTGATTCGT
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protein sequence of NO16G03220.1

>NO16G03220.1-protein ID=NO16G03220.1-protein|Name=NO16G03220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=330bp
MCALPGRRRLQFLGTLAATLLLSTTAASCASSMRPAMARSTFTAFLSPIL
PPHTVPTIRGAVSFSSSSTSSFSSSSSTQNDRASVLRRYAYAKGRPSLDD
VERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRR
ERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYRPVGPV
ELDAAWEVCESLENELLLPARKSSATADDAAVVAAAAATPTVAEGALAEA
APVAETTIEEGKKDAVVLPALRAQWEQTRQSFEEDDWEKKPIWDLPVLSY
VYDCTGDRGLAKKIAQEAHARLGKLKRKR*
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Synonyms
Publications