NO16G03220, NO16G03220 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO16G03220 vs. NCBI_GenBank
Match: EWM23781.1 (hypothetical protein Naga_100330g3 [Nannochloropsis gaditana]) HSP 1 Score: 334.0 bits (855), Expect = 5.400e-88 Identity = 169/232 (72.84%), Postives = 187/232 (80.60%), Query Frame = 0
Query: 82 RASVLRRYAYAKGRPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYRPVGPVELDAAWEVCESLENELLLPARXXXXXXXXXXXXXXXXXXXXXAEGALAEAAPVAETTIEEGKKDAVVLPALRAQWEQTRQSFEEDDWEKKPIWDLPVLSYVYDCTGDRGLAKK 314
R+ +LRR+AYAKGRPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYRPV PVELD+AWEVC +LE E L A E A A+ + E +EG + +P+LRA+WE+ R+SFEE+DWEKKPIW+LPVL+YVY+CTGDRGLAKK
Sbjct: 74 RSDLLRRHAYAKGRPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYRPVQPVELDSAWEVCVALEEEFLSAA-----------------ASAVSQEDGTANASSLGE---QEGSE----VPSLRAKWERMRESFEEEDWEKKPIWELPVLAYVYNCTGDRGLAKK 281
BLAST of NO16G03220 vs. NCBI_GenBank
Match: CBJ48324.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 162.5 bits (410), Expect = 2.200e-36 Identity = 83/127 (65.35%), Postives = 93/127 (73.23%), Query Frame = 0
Query: 93 KGRPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYRPVGPVELDAAWEVCESLENELLLP 220
+GRPSLDDVERLS GQAAKKRGTGSR +CHRLNE ERK +DLAKK G+V LRGTGYRRERKGSPL NI RQ CDA PC V G G DAVDEV +D SP R V +D+ E +++ EL P
Sbjct: 65 RGRPSLDDVERLSRGQAAKKRGTGSRGVCHRLNESERKAYDLAKKQGYVVLRGTGYRRERKGSPLQNIFRQFCDAKAMPCTSVLTGQGPDAVDEVEIDFSPLRTSREV-MDSLSEQADAVAAELEAP 190
BLAST of NO16G03220 vs. NCBI_GenBank
Match: CEM03333.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 132.9 bits (333), Expect = 1.800e-27 Identity = 67/108 (62.04%), Postives = 81/108 (75.00%), Query Frame = 0
Query: 90 AYAKGRPSLDDVERLSHGQAA--KKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYR 196
A A GR +LDDVER+S GQAA K+RGTGSRN+ HRLN+ ERK +D+AK ++ G+ YRRERKGSPLANI+RQ CDA PCI + +GLG + D VVVDLSP R
Sbjct: 68 ARAPGRAALDDVERISRGQAARKKRRGTGSRNVPHRLNQEERKLYDIAKGRRYLVTSGSAYRRERKGSPLANIYRQWCDAQATPCINIQKGLGPEGSDLVVVDLSPLR 175
BLAST of NO16G03220 vs. NCBI_GenBank
Match: PRW39173.1 (sodium phosphate symporter [Chlorella sorokiniana]) HSP 1 Score: 124.8 bits (312), Expect = 5.000e-25 Identity = 66/121 (54.55%), Postives = 82/121 (67.77%), Query Frame = 0
Query: 95 RPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYRPVGPVELDAAWEVCESLENE 216
RPSLDDV+R+S G AAK RGTGSR + HRLN ERK +DLAK+ GF+ + G+GYRRERKGSPLANI RQ CDA GRP + + + G D V+VD S R ++D A C S+ +
Sbjct: 563 RPSLDDVQRISTGDAAKHRGTGSRAVPHRLNAEERKAYDLAKQKGFLTIAGSGYRRERKGSPLANIWRQWCDAQGRPAVLLTK--GPTGEDAVLVDYSTLR---QADVDQARAACRSIAQQ 678
BLAST of NO16G03220 vs. NCBI_GenBank
Match: GAX82752.1 (hypothetical protein CEUSTIGMA_g10178.t1 [Chlamydomonas eustigma]) HSP 1 Score: 119.4 bits (298), Expect = 2.100e-23 Identity = 58/101 (57.43%), Postives = 71/101 (70.30%), Query Frame = 0
Query: 95 RPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYR 196
RP +DDV+RLS G+ AK RGTG R+I HRLNE E F AKK GF +RGTGYR+ERKG+PL NI RQ CDA PCI + + + + D +VVDL+P R
Sbjct: 27 RPHVDDVDRLSRGEGAKIRGTGCRDIPHRLNEQEHAGFKAAKKKGFAAVRGTGYRKERKGNPLPNIFRQWCDAKEMPCIVIEQDMLGGSRDNIVVDLTPMR 127
BLAST of NO16G03220 vs. NCBI_GenBank
Match: XP_002180196.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48387.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 119.0 bits (297), Expect = 2.800e-23 Identity = 85/234 (36.32%), Postives = 108/234 (46.15%), Query Frame = 0
Query: 95 RPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRP-CIEVHRGLGTDAVDEVVVDLSPYRPVG----PVELD---AAWEVCESLENELLLPARXXXXXXXXXXXXXXXXXXXXXAEGALAEAAPVAETTIEEGKKDAVVLPALRAQWEQTRQSFEEDDWEKKPIWDLPVLSYVYDCTGDRGLAKKIAQEAHA 321
R S DDVERLS GQ +KK+G GSRN+ HRLN+ ER E D A K GFV GTG RR RKGSPLANIHRQ CDA +P + G +D+V+VDLSP R G P +D A W+ + + ++ +E D + + + W KPIW LPV+S+ GDR AK +A+E A
Sbjct: 199 RISRDDVERLSRGQPSKKKGYGSRNVPHRLNDEERAEMDRAAKKGFVSFAGTGNRRTRKGSPLANIHRQWCDARDKPQILHFKASGGRQPLDQVIVDLSPLRLNGLFDDPSRVDDFLAKWKA----------------------------DIATAASNSGMQIYTRTSDVDADENDLDEDIATDYLVTLDHHAVM---EAWATKPIWKLPVVSFAV-FEGDRPRAKAMAKELAA 400
BLAST of NO16G03220 vs. NCBI_GenBank
Match: KOO31105.1 (hypothetical protein Ctob_008662, partial [Chrysochromulina sp. CCMP291]) HSP 1 Score: 115.9 bits (289), Expect = 2.300e-22 Identity = 61/129 (47.29%), Postives = 88/129 (68.22%), Query Frame = 0
Query: 82 RASVLRRYAYAKGRPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGL-GTDAVDEVVVDLSPYRPVGPVELDAAWEVC 210
+ +V R ++ RP++DDV+R+S G+ AK++GTGSR + HRLN+ ER +D A++ GFV++ G+G+R ER+ SPL N R CDA G P I +H+G GTD D+VVVDL+P R P+ +AA C
Sbjct: 100 QGTVPRPFSRDCWRPTIDDVDRISWGRNAKQKGTGSRGVPHRLNDDERSLYDFARRKGFVEIGGSGWRSERRDSPLVNTFRSWCDARGVPAIYLHKGRDGTD--DQVVVDLAPLRT--PLRFEAAAAFC 224
BLAST of NO16G03220 vs. NCBI_GenBank
Match: PNW72006.1 (hypothetical protein CHLRE_16g686350v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 112.1 bits (279), Expect = 3.400e-21 Identity = 57/113 (50.44%), Postives = 77/113 (68.14%), Query Frame = 0
Query: 95 RPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAV--DEVVVDLSPYRPVGPVELDAA 206
RPS+DD++ +S G AK RGTGSR I HRLN ER +D+AKK G+V +RGT YR+ER G+PL N++RQ CDA + C+ V + A D+VVVDL+P R +++AA
Sbjct: 78 RPSIDDIDSISWGGRAKVRGTGSRKIPHRLNAEERGLYDMAKKKGYVAVRGTAYRKERHGNPLPNVYRQWCDAKAQLCVVVEQDRTGSAPGGDQVVVDLAPLRREATEQVEAA 190
BLAST of NO16G03220 vs. NCBI_GenBank
Match: PSC72005.1 (S15 RNA-binding [Micractinium conductrix]) HSP 1 Score: 112.1 bits (279), Expect = 3.400e-21 Identity = 55/98 (56.12%), Postives = 70/98 (71.43%), Query Frame = 0
Query: 98 LDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYR 196
++DV+R+S G AA+ RGTGSR + HRLN ER F++A+K + L G+GYRRERKGSPLAN+ RQ CDA G PC+ V +G A D V+VDLS R
Sbjct: 1 MEDVQRISRGDAARARGTGSRAVPHRLNAEERAAFEVARKKWVLALAGSGYRRERKGSPLANLWRQWCDAAGMPCVLVCKGATAAAGDTVLVDLSTLR 98
BLAST of NO16G03220 vs. NCBI_GenBank
Match: GAX21630.1 (hypothetical protein FisN_29Hu067 [Fistulifera solaris]) HSP 1 Score: 109.4 bits (272), Expect = 2.200e-20 Identity = 52/101 (51.49%), Postives = 73/101 (72.28%), Query Frame = 0
Query: 95 RPSLDDVERLSHGQAAKKRGTGSRNICHRLNEMERKEFDLAKKMGFVQLRGTGYRRERKGSPLANIHRQLCDALGRPCIEVHRGLGTDAVDEVVVDLSPYR 196
RP DVER+S G+ AK++GTGSR + HRLN ER F+ A++ GF+++ G+G+R ER+ +PL N HR CDA G+ C+ +H+GL + AVD V+DLSP R
Sbjct: 34 RPDKQDVERISWGKPAKQKGTGSRGVPHRLNSDERVLFEQARRKGFLEVVGSGWRSERREAPLLNTHRSWCDARGQACLRLHKGL-SGAVDTFVLDLSPLR 133 The following BLAST results are available for this feature:
BLAST of NO16G03220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G03220 ID=NO16G03220|Name=NO16G03220|organism=Nannochloropsis oceanica|type=gene|length=1171bpback to top protein sequence of NO16G03220.1 >NO16G03220.1-protein ID=NO16G03220.1-protein|Name=NO16G03220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=330bpback to top Synonyms
Publications
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