NO16G03210, NO16G03210 (gene) Nannochloropsis oceanica

Overview
NameNO16G03210
Unique NameNO16G03210
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1504
Alignment locationchr16:961995..963498 +

Link to JBrowse

Properties
Property NameValue
DescriptionSMP-30/Gluconolaconase/LRE-like region
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:961995..963498 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013658SGL
IPR005511SMP-30
Homology
BLAST of NO16G03210 vs. NCBI_GenBank
Match: EWM23782.1 (SMP-30/Gluconolaconase/LRE-like region [Nannochloropsis gaditana])

HSP 1 Score: 466.8 bits (1200), Expect = 5.400e-128
Identity = 221/333 (66.37%), Postives = 257/333 (77.18%), Query Frame = 0
Query:    1 MTDASNFNPRLVVDAKNILGEGPVWDDRRQALLWIDIEGKTLHTYAPAGGKTATYPLPMRPCSFALREAGEGLLFAFEDGFAVYDPFVADLSISTPPKYLSASDYVEGHSYHRHGQVRLNDGRCDRHGRFIAGGYNGDEGDAEAGREWECICGVYVVETQASTTGKREAAGEKKETKMVAREMFPFKVRCANSTAFSPDGSVMYFADSPNREIWAFDYDWKAGRVKAESKRVFATIPSPGVPDGSCVDSEGFVWNAEFFSGRVVRYSPEGNVDRVLQLPVSRVTCPCLGGADLKTMYMTCASAGIERGTEEGSGGLWALEVETPGLPEARFRG 334
            M +  + +PRLV+D KNILGE PVWD + Q LLWIDIEGKTLHTY+PA  ++A++ LP R  S ALREA +GLLFAFEDGFA+++PFV D + + PP Y+    Y+E   Y +H  VRLNDGRCDR GRFIAGGYNGDEGDA   REWE  CGVY VE      GK +A+         ARE+ PFKVRCANS  FSPDGS +YF DSP+REIW FDYD   GRV  +S+RVFAT+P PGVPDGSCVDS G++WNAEFFSGRVVRYSPEG VDRV+QLPVSRVTCPCLGG DLKT+++T AS G+E G EEG+GGLWA+EVETPGLPE RF G
Sbjct:    1 MANHPSASPRLVLDLKNILGESPVWDVQAQVLLWIDIEGKTLHTYSPADERSASFSLPKRAGSIALREADDGLLFAFEDGFAIFNPFVTDTNAAKPPVYIPDEAYIETEPYRQHALVRLNDGRCDRRGRFIAGGYNGDEGDASMNREWEADCGVYAVE-----AGKGDAS-------FAARELLPFKVRCANSICFSPDGSHLYFTDSPHREIWVFDYDQATGRVVVDSRRVFATVPPPGVPDGSCVDSAGYLWNAEFFSGRVVRYSPEGEVDRVVQLPVSRVTCPCLGGRDLKTLFLTSASVGVE-GKEEGAGGLWAMEVETPGLPEGRFMG 320          
BLAST of NO16G03210 vs. NCBI_GenBank
Match: WP_036238584.1 (SMP-30/gluconolactonase/LRE family protein [Massilia sp. JS1662] >KGF79255.1 gluconolaconase [Massilia sp. JS1662])

HSP 1 Score: 211.8 bits (538), Expect = 3.200e-51
Identity = 130/326 (39.88%), Postives = 167/326 (51.23%), Query Frame = 0
Query:   11 LVVDAKNILGEGPVWDDRRQALLWIDIEGKTLHTYAPAGGKTATYPLPMRPCSFALREAGEGLLFAFEDGFAVYDPFVADLSISTPPKYLSASDYVEGHSYHRHGQVRLNDGRCDRHGRFIAGGYNGDEGDAEAGREWECICGVYVVETQASTTGKREAAGEKKETKMVAREMFPFKVRCANSTAFSPDGSVMYFADSPNREIWAFDYDWKAGRVKAESKRVFATIPSPGVPDGSCVDSEGFVWNAEFFSGRVVRYSPEGNVDRVLQLPVSRVTCPCLGGADLKTMYMTCASAGIERG---TEEGSGGLWALEVETPGLPEARFRG 334
            LVVD +NILGEG VWDD+   L W DIEG  L ++APA G    +PLP R CS AL      LL     G A +D    D+              VE H        RLNDGR DR GRF+ G +N  E   +A      I G Y        T +R   G+               V  ANS  FSPDG  MY+ADS  REI   DYD   G + +  +   A   +PG PDGS +D++G++W+  + +G+VVR++P+G VDRVL LP  + TCP  GG DL  +Y+T A+ G+  G       SGG++A +V   GL E RF G
Sbjct:    4 LVVDGRNILGEGIVWDDKGARLFWTDIEGSELWSHAPATGALQRWPLPERLCSLALTHDDGRLLLGLASGLAFFDLASGDIDRICD---------VEAHL----PTTRLNDGRTDRQGRFVFGVFNQAENPKDA------IGGFY--RLNHDLTLERLPLGD---------------VAIANSICFSPDGRTMYYADSGTREIRCCDYDPDTGAI-SNLREFAAADAAPGDPDGSTIDADGYLWSTRWGAGQVVRFTPDGIVDRVLTLPAPQPTCPAFGGPDLDVLYVTSATVGLRAGQLADAPKSGGVFAKKVTIKGLAEVRFAG 292          
BLAST of NO16G03210 vs. NCBI_GenBank
Match: OHV87497.1 (hypothetical protein ORS3428_21225 [Mesorhizobium sp. ORS 3428])

HSP 1 Score: 211.1 bits (536), Expect = 5.400e-51
Identity = 123/328 (37.50%), Postives = 177/328 (53.96%), Query Frame = 0
Query:   10 RLVVDAKNILGEGPVWDDRRQALLWIDIEGKTLHTYAPAGGKTATYPLPMRPCSFALREAGEGLLFAFEDGFAVYDPFVADLS-ISTPPKYLSASDYVEGHSYHRHGQVRLNDGRCDRHGRFIAGGYNGDEGDAEAGREWECICGVYVVETQASTTGKREAAGEKKETKMVAREMFPFKVRCANSTAFSPDGSVMYFADSPNREIWAFDYDWKAGRVKAESKRVFATIPSPGVPDGSCVDSEGFVWNAEFFSGRVVRYSPEGNVDRVLQLPVSRVTCPCLGGADLKTMYMTCASAGIER---GTEEGSGGLWALEVETPGLPEARFRG 334
            R V  +++ LGE PVWD   QAL W+DIEG+ L     A GK   +  P R CSFALRE G GL+ A   G A +DP    +  I+ P  +++ +              R N+G+CDR GRF  G  +         R  E    +Y V+   + T      G                   +NS  +SPD    YFAD+ +R I+A+D+D +AG V    KR+FA+  +PG PDGS +D+EG++WNAE+   R+VRY+P+G++DR+++LPV + T    G  DLKT+++T A   +      ++  +G L A+EVE PGLPE RF+G
Sbjct:    5 REVYASRDKLGEVPVWDVAEQALYWVDIEGRRLRRLDHASGKVDEWSFPERICSFALREKG-GLICALASGLAFFDPATGRIDWIAKPEAHIARN--------------RFNEGKCDRQGRFWVGSMD--------DRLSEHTGALYRVDADLTITQVETGIG------------------ISNSLVWSPDEKTFYFADTMDRAIYAYDFDREAGAV--SRKRLFASTKAPGSPDGSTIDAEGYLWNAEWDGWRLVRYAPDGSIDRIVELPVQKPTSCMFGXPDLKTLFVTSAIWDLNAEALASQPMAGSLLAVEVEVPGLPEPRFKG 289          
BLAST of NO16G03210 vs. NCBI_GenBank
Match: WP_083355186.1 (SMP-30/gluconolactonase/LRE family protein [Mesorhizobium sp. ORS 3428])

HSP 1 Score: 211.1 bits (536), Expect = 5.400e-51
Identity = 123/328 (37.50%), Postives = 177/328 (53.96%), Query Frame = 0
Query:   10 RLVVDAKNILGEGPVWDDRRQALLWIDIEGKTLHTYAPAGGKTATYPLPMRPCSFALREAGEGLLFAFEDGFAVYDPFVADLS-ISTPPKYLSASDYVEGHSYHRHGQVRLNDGRCDRHGRFIAGGYNGDEGDAEAGREWECICGVYVVETQASTTGKREAAGEKKETKMVAREMFPFKVRCANSTAFSPDGSVMYFADSPNREIWAFDYDWKAGRVKAESKRVFATIPSPGVPDGSCVDSEGFVWNAEFFSGRVVRYSPEGNVDRVLQLPVSRVTCPCLGGADLKTMYMTCASAGIER---GTEEGSGGLWALEVETPGLPEARFRG 334
            R V  +++ LGE PVWD   QAL W+DIEG+ L     A GK   +  P R CSFALRE G GL+ A   G A +DP    +  I+ P  +++ +              R N+G+CDR GRF  G  +         R  E    +Y V+   + T      G                   +NS  +SPD    YFAD+ +R I+A+D+D +AG V    KR+FA+  +PG PDGS +D+EG++WNAE+   R+VRY+P+G++DR+++LPV + T    G  DLKT+++T A   +      ++  +G L A+EVE PGLPE RF+G
Sbjct:   17 REVYASRDKLGEVPVWDVAEQALYWVDIEGRRLRRLDHASGKVDEWSFPERICSFALREKG-GLICALASGLAFFDPATGRIDWIAKPEAHIARN--------------RFNEGKCDRQGRFWVGSMD--------DRLSEHTGALYRVDADLTITQVETGIG------------------ISNSLVWSPDEKTFYFADTMDRAIYAYDFDREAGAV--SRKRLFASTKAPGSPDGSTIDAEGYLWNAEWDGWRLVRYAPDGSIDRIVELPVQKPTSCMFGXPDLKTLFVTSAIWDLNAEALASQPMAGSLLAVEVEVPGLPEPRFKG 301          
BLAST of NO16G03210 vs. NCBI_GenBank
Match: PPR22665.1 (L-arabinolactonase [Alphaproteobacteria bacterium MarineAlpha10_Bin2])

HSP 1 Score: 211.1 bits (536), Expect = 5.400e-51
Identity = 128/333 (38.44%), Postives = 179/333 (53.75%), Query Frame = 0
Query:   12 VVDAKNILGEGPVWDDRRQALLWIDIEGKTLHTYAPAGGKTATYPLPMRPCSFALREAGEGLLFAFEDGFAVYD------PFVADLSISTPPKYLSASDYVEGHSYHRHGQVRLNDGRCDRHGRFIAGGYNGDEGDAEAGREWECICGVYVVETQASTTGKREAAGEKKETKMVAREMFPFKVRCANSTAFSPDGSVMYFADSPNREIWAFDYDWKAGRVKAESKRVFA-TIPSPGVPDGSCVDSEGFVWNAEFFSGRVVRYSPEGNVDRVLQLPVSRVTCPCLGGADLKTMYMTCAS---AGIERGTEEGSGGLWALE-VETPGLPEARFRG 334
            VVD KN+LGEGPVW     AL W+DI+GK+++ Y PA G   T+P+   P S ALR  G GL+ AF  GF  YD        + D+   TP                   + RLNDGRCDR GRF AG  + D  +   G       G+Y ++   S          K E+ ++          C+NS AFSPDG+ MY+AD     IWA+D D ++G +   ++RVFA T    G PDGS VD+EG++WNA +    + R++P+G ++R ++LPV R TCP  GG +L T+Y+TCAS   +  +   +  +GG++ +      GLPE RF G
Sbjct:    7 VVDCKNVLGEGPVWCPVENALYWVDIKGKSINRYKPATGDVETWPVDEEPGSIALRRGG-GLMVAFYGGFRSYDLDTGTSETIHDIEAETP-------------------RSRLNDGRCDRQGRFWAGSMD-DLMEEPLG-------GLYRLDADLSV--------HKAESNII----------CSNSLAFSPDGATMYYADLGIDTIWAYDLDTESGEI--ANRRVFASTKDMQGRPDGSAVDTEGYLWNAMWDGWCLARWAPDGTLERTIELPVQRPTCPMFGGDNLDTIYLTCASIFLSDADLAKQPQAGGVFTITGTGATGLPEPRFAG 291          
BLAST of NO16G03210 vs. NCBI_GenBank
Match: WP_094076729.1 (SMP-30/gluconolactonase/LRE family protein [Notoacmeibacter marinus] >OXT02778.1 regucalcin [Notoacmeibacter marinus])

HSP 1 Score: 209.9 bits (533), Expect = 1.200e-50
Identity = 125/329 (37.99%), Postives = 182/329 (55.32%), Query Frame = 0
Query:   11 LVVDAKNILGEGPVWDDRRQALLWIDIEGKTLHTYAPAGGKTATYPLPMRPCSFALREAGEGLLFAFEDGFAVYDPFVADLSISTPPKYLSASDYVEGHSYHRHGQVRLNDGRCDRHGRFIAGGYNGDEGDAEAGREWECICGVYVVETQASTTGKREAAGEKKETKMVAREMFPFKVRCANSTAFSPDGSVMYFADSPNREIWAFDYDWKAGRVKAESKRVFATI-PSPGVPDGSCVDSEGFVWNAEFFSGRVVRYSPEGNVDRVLQLPVSRVTCPCLGGADLKTMYMTCA-----SAGIERGTEEGSGGLWALEVETPGLPEARFRG 334
            L+VD KN  GEG  W+     + W DIEG  L ++ PA  ++A++ +  R C FA R +G GL+ A+ D   ++DP   + S+ T                  + Q RLNDGR DR GR I GG N                           +GK +++  + +T +  +E+   +V CANST FSPDGS M+FAD+P+REI A+DYD + G V   ++RV A+    PG+PDGSCVD+EG VWNAE+   RVVR +P+G +DR++ +PV + TC   GG DL T+++T +      A +E+  E  SGGL+A++    G+ +  F G
Sbjct:    5 LIVDCKNKHGEGVFWNPSDGLVWWTDIEGCALWSFDPATSQSASHEMSERVCCFAPRASG-GLIVAYADRVVLFDPLTKEESLVT-------------RFEPENPQTRLNDGRTDRQGRLIVGGMN-------------------------EVSGKPDSSVIRIDTDLKVQEIIG-QVSCANSTCFSPDGSTMFFADTPDREIVAYDYDTQTGSV--SNRRVHASFKDEPGLPDGSCVDAEGGVWNAEWEGRRVVRVAPDGTIDRMIDVPVWKPTCCAFGGPDLDTLFITTSRLMSDEAALEKELE--SGGLFAVKPGIRGVIDVPFNG 289          
BLAST of NO16G03210 vs. NCBI_GenBank
Match: WP_007196186.1 (SMP-30/gluconolactonase/LRE family protein [Hoeflea phototrophica] >EDQ34925.1 Gluconolactonase [Hoeflea phototrophica DFL-43])

HSP 1 Score: 206.8 bits (525), Expect = 1.000e-49
Identity = 125/327 (38.23%), Postives = 176/327 (53.82%), Query Frame = 0
Query:   11 LVVDAKNILGEGPVWDDRRQALLWIDIEGKTLHTYAPAGGKTATYPLPMRPCSFALREAGEGLLFAFEDGFAVYDPFVADLSISTPPKYLSASDYVEGHSYHRHGQVRLNDGRCDRHGRFIAGGYNGDEGDAEAGREWECICGVYVVETQASTTGKREAAGEKKETKMVAREMFPFKVRCANSTAFSPDGSVMYFADSPNREIWAFDYDWKAGRVKAESKRVFATI-PSPGVPDGSCVDSEGFVWNAEFFSGRVVRYSPEGNVDRVLQLPVSRVTCPCLGGADLKTMYMTCASAGIERGT---EEGSGGLWALEVETPGLPEARFRG 334
            LVVD KN  GEG  W+     + W DIEG+ L ++ P  G +A + +  R C FA R AG GL+ A+ D   ++DP  A   + T    L   D         + + RLNDGR DR GR I GG N   G A +         V  ++T  +     E                   V CANST FSPDG+ M+FAD+P+R+I+AFDYD   G+V   ++R+ A+    PG+PDGSCVD+EG VWNAE+   RVVR +P+G +DR++++PV + TC   GG DL  +++T +    +      E  SGGL+A++    G+ +A F G
Sbjct:    5 LVVDCKNQHGEGIFWNPADALVWWTDIEGRALWSFDPVTGNSARHGMSERVCCFAPRAAG-GLIVAYADRVVLFDPATAQEKLVT----LFEPD---------NPETRLNDGRTDRAGRLIVGGMNEVSGKANS--------SVLCIDTDLTVRTLLEG------------------VSCANSTCFSPDGATMFFADTPDRQIFAFDYDIGTGQV--SNRRLHASFNDEPGLPDGSCVDAEGGVWNAEWEGRRVVRVAPDGKIDRIVEVPVWKPTCCAFGGPDLDILFITTSRLMSDEEVLKKEPDSGGLFAVKPGNRGVIDAPFNG 289          
BLAST of NO16G03210 vs. NCBI_GenBank
Match: WP_105379807.1 (SMP-30/gluconolactonase/LRE family protein [Massilia phosphatilytica] >PQO93318.1 gluconolaconase [Massilia phosphatilytica])

HSP 1 Score: 206.8 bits (525), Expect = 1.000e-49
Identity = 127/327 (38.84%), Postives = 164/327 (50.15%), Query Frame = 0
Query:   11 LVVDAKNILGEGPVWDDRRQALLWIDIEGKTLHTYAPAGGKTATYPLPMRPCSFALREAGEGLLFAFEDGFAVYDPFVADLSISTPPKYLSASDYVEGHSYHRHGQVRLNDGRCDRHGRFIAGGYNGDEGDAEAGREWECICGVYVVETQASTTGKREAAGEKKETKMVAREMFPF-KVRCANSTAFSPDGSVMYFADSPNREIWAFDYDWKAGRVKAESKRVFATIPSPGVPDGSCVDSEGFVWNAEFFSGRVVRYSPEGNVDRVLQLPVSRVTCPCLGGADLKTMYMTCASAGI---ERGTEEGSGGLWALEVETPGLPEARFRG 334
            LVVD +NILGEG +WDDR   L W DIEG  L ++APA G    +PLP R CS AL      LL     G A +D    +L              VE H        RLNDGR DR GRF+ G +N  E   +       I G Y +    S                   E  P   V  ANS  FSPDG  MY+ADS  REI   DYD   G + A  +   A   +PG PDGS +D++G++W+  + +G+VVR++P+G+VDRVL LP  + TCP  GG  L  +Y+T A+ G+   +      SGG++A  +   GL E RF G
Sbjct:    4 LVVDGRNILGEGIIWDDRAGCLFWTDIEGSELWSHAPATGALQRWPLPERLCSLALTHDDGRLLLGLASGLAFFDLASGELDRICD---------VEAHL----PTTRLNDGRTDRQGRFVFGVFNQTENPKDP------IGGFYRLNHDLSL------------------ERLPLGGVAIANSICFSPDGRTMYYADSGTREIRCCDYDPDTGAI-ANLREFAAVDAAPGDPDGSTIDADGYLWSTRWGAGQVVRFAPDGSVDRVLTLPAPQPTCPAFGGPGLDVLYVTSATVGLRASQLADAPKSGGVFAKTLPIRGLAEVRFAG 292          
BLAST of NO16G03210 vs. NCBI_GenBank
Match: WP_056439505.1 (SMP-30/gluconolactonase/LRE family protein [Massilia sp. Root335] >KQV50116.1 gluconolaconase [Massilia sp. Root335])

HSP 1 Score: 206.1 bits (523), Expect = 1.700e-49
Identity = 124/333 (37.24%), Postives = 165/333 (49.55%), Query Frame = 0
Query:   11 LVVDAKNILGEGPVWDDRRQALLWIDIEGKTLHTYAPAGGKTATYPLPMRPCSFALREAGEGLLFAFEDGFAVYD------PFVADLSISTPPKYLSASDYVEGHSYHRHGQVRLNDGRCDRHGRFIAGGYNGDEGDAEAGREWECICGVYVVETQASTTGKREAAGEKKETKMVAREMFPF-KVRCANSTAFSPDGSVMYFADSPNREIWAFDYDWKAGRVKAESKRVFATIPSPGVPDGSCVDSEGFVWNAEFFSGRVVRYSPEGNVDRVLQLPVSRVTCPCLGGADLKTMYMTCASAGIERG---TEEGSGGLWALEVETPGLPEARFRG 334
            LVVD +++LGEG +WDDR   LLW DIE   L ++APA G    +PLP R CS AL E    LL     G A +D        + D+    P                     RLNDGR DR GRF+ G +N  E   +A      I G Y +                     +  E  P   V  ANS  FSPDG  MY+ADS  REI   DYD   G + A  ++      +PG PDGS +D++G++W   + +G+VVR++P+G+VDR+L LP  + TCP  GGA L  +Y+T A+ G+  G       SGG++A  +   GL E RF G
Sbjct:    4 LVVDGRHVLGEGIIWDDRGARLLWTDIERSELWSHAPATGALQRWPLPERLCSMALTEVDGCLLLGLASGLAFFDLASGELDRICDVEADLP-------------------TTRLNDGRTDRQGRFVFGMFNQAENPKDA------IGGFYRLNHD------------------LTLERLPLGNVAIANSICFSPDGCTMYYADSGTREIRCCDYDPVTGAI-ANLRQFVPADAAPGDPDGSTIDADGYLWGTRWGAGQVVRFAPDGSVDRILTLPAPQPTCPAFGGAGLDVLYVTSATVGLRAGQLADAPKSGGVFAQTLPVRGLTEVRFAG 292          
BLAST of NO16G03210 vs. NCBI_GenBank
Match: WP_085877751.1 (SMP-30/gluconolactonase/LRE family protein [Roseisalinus antarcticus] >SLN26713.1 L-arabinolactonase [Roseisalinus antarcticus])

HSP 1 Score: 205.3 bits (521), Expect = 3.000e-49
Identity = 128/328 (39.02%), Postives = 175/328 (53.35%), Query Frame = 0
Query:   10 RLVVDAKNILGEGPVWDDRRQALLWIDIEGKTLHTYAPAGGKTATYPLPMRPCSFALREAGEGLLFAFEDGFAVYDPFVADLSISTPPKYLSASDYVEGHSYHRHGQVRLNDGRCDRHGRFIAGGYNGDEGDAEAGREWECICGVYVVETQASTTGKREAAGEKKETKMVAREMFPFKVRCANSTAFSPDGSVMYFADSPNREIWAFDYDWKAGRVKAESKRVFATI-PSPGVPDGSCVDSEGFVWNAEFFSGRVVRYSPEGNVDRVLQLPVSRVTCPCLGGADLKTMYMTCASAGIERGT---EEGSGGLWALEVETPGLPEARFRG 334
            RL   A+N LGE PVWD R QAL W+DIEG+ L       G+   + LP R  SFALRE G G++ AF  GFA YD       + T      A D++        G  R NDG+ DR GRF AG                         T   +   R A+  + +  +    M    V  +N+  +SPD  + YFAD+  +EIW +D+D  +G +   ++RVFAT    PG PDGS +D+EGF+WNA++   R+VRY+P+G+VDRV+ LPV + T    GG DLKT+Y+T A   +++ T   +  +G L AL+V   GLPE RF G
Sbjct:    5 RLAAKAENTLGEVPVWDPRSQALWWVDIEGRLLQRLHQPSGEIRVWTLPERIGSFALREGG-GVVCAFASGFAFYD-------LET-----GAVDWIARPEADLPGN-RFNDGKVDRRGRFWAG-------------------------TMDDSLSNRTASLYRLDPDLTVHRM-ETGVGISNALCWSPDDRLFYFADTLQQEIWVYDHDAASGAI--GNRRVFATTHDQPGQPDGSTIDAEGFMWNAQWDGWRLVRYAPDGSVDRVVDLPVQKPTSCMFGGTDLKTLYVTTAIWDLDQRTLADQPWAGSLLALDVGVAGLPETRFAG 290          
The following BLAST results are available for this feature:
BLAST of NO16G03210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23782.15.400e-12866.37SMP-30/Gluconolaconase/LRE-like region [Nannochlor... [more]
WP_036238584.13.200e-5139.88SMP-30/gluconolactonase/LRE family protein [Massil... [more]
OHV87497.15.400e-5137.50hypothetical protein ORS3428_21225 [Mesorhizobium ... [more]
WP_083355186.15.400e-5137.50SMP-30/gluconolactonase/LRE family protein [Mesorh... [more]
PPR22665.15.400e-5138.44L-arabinolactonase [Alphaproteobacteria bacterium ... [more]
WP_094076729.11.200e-5037.99SMP-30/gluconolactonase/LRE family protein [Notoac... [more]
WP_007196186.11.000e-4938.23SMP-30/gluconolactonase/LRE family protein [Hoefle... [more]
WP_105379807.11.000e-4938.84SMP-30/gluconolactonase/LRE family protein [Massil... [more]
WP_056439505.11.700e-4937.24SMP-30/gluconolactonase/LRE family protein [Massil... [more]
WP_085877751.13.000e-4939.02SMP-30/gluconolactonase/LRE family protein [Roseis... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL155nonsL155Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR032ngnoR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK007533NSK007533Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G03210.1NO16G03210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100330g4gene6679Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G03210.1NO16G03210.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G03210 ID=NO16G03210|Name=NO16G03210|organism=Nannochloropsis oceanica|type=gene|length=1504bp
CCCAACACACAGCATTCTGCCGGCAAATTGCACCTGCCTGGATGCCCGCG
CATACCTTATGACGGACGCAAGTAACTTCAATCCCCGCCTAGTTGTGgta
cgtccgtcgcattgtagtgccttgccttccacctgcatcttgcctccttt
cctagcttacgctaccaccgcatcagttaacagcgtgttggaccagacac
tgggtgcatatagcaccgacgtgtgtatttctctgtcttgattgtcacac
gcggctcccattacaatctctcctctactcttcctctcctttctttcctc
cctacccccctaacaacgccaagGACGCCAAGAACATTCTAGGGGAAGGC
CCCGTGTGGGACGACAGACGCCAAGCCTTACTCTGGATCGATATCGAAGG
CAAAACTTTGCACACCTACGCACCAGCTGGTGGGAAGACAGCCACCTACC
CCTTGCCTATGCGCCCGTGCTCTTTTGCCTTGCGGGAGGCTGGGGAAGGG
CTGCTCTTTGCGTTTGAGGATGGGTTTGCTGTGTACGATCCTTTCGTGGC
CGACCTTTCCATCTCCACTCCTCCTAAGTACTTGTCGGCATCTGATTACG
TGGAGGGCCACTCCTACCACCGCCATGGTCAGGTGCGCCTGAACGACGGG
CGTTGCGACAGGCACGGCCGCTTCATCGCGGGGGGCTACAATGGCGATGA
GGGTGATGCCGAGGCGGGGCGGGAGTGGGAGTGTATTTGCGGAGTGTACG
TAGTCGAAACACAAGCTAGCACTACGGGCAAAAGGGAAGCAGCAGGAGAA
AAGAAGGAGACGAAGATGGTTGCACGAGAGATGTTTCCCTTCAAGGTGCG
ATGCGCAAACTCTACCGCCTTCAGCCCGGACGGCTCCGTGATGTACTTCG
CTGATTCCCCCAACAGAGAGATCTGGGCGTTCGACTACGACTGGAAGGCG
GGGCGGGTGAAGGCGGAGAGCAAGCGCGTCTTCGCCACCATTCCGTCCCC
AGGGGTCCCGGACGGCTCCTGCGTCGACAGCGAGGGTTTTGTATGGAACG
CCGAATTCTTCTCGGGACGCGTGGTGCGCTACTCGCCGGAAGGAAACGTG
GACCGGGTGCTGCAGCTGCCGGTGAGTCGGGTGACCTGCCCGTGTTTGGG
GGGGGCGGACCTCAAGACGATGTACATGACGTGTGCCTCCGCCGGGATCG
AGAGGGGGACGGAGGAAGGGTCAGGGGGCTTGTGGGCCTTAGAGGTGGAA
ACACCGGGTCTGCCCGAAGCGAGGTTTCGGGGTTAAAGGTAGTGGAAAGG
GGGAGGGAGGAGGTGATATTTCCGAAGGGGTTGCACAAACAAAAGTCTTA
AAGTATCAAGTTAAGAAATTGCCGCAATGCGTCCTCGATGATGCAACTGC
TCCAGAGGCTGGCTGTTGCTTTATTCTGCTTAGTCAGGGTCAGAGTTGCG
ACCCTTGATTTACAGATGGAAGTATGAGAAGAGAGGCAAAGCAACAAACA
AAGC
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protein sequence of NO16G03210.1

>NO16G03210.1-protein ID=NO16G03210.1-protein|Name=NO16G03210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=334bp
MTDASNFNPRLVVDAKNILGEGPVWDDRRQALLWIDIEGKTLHTYAPAGG
KTATYPLPMRPCSFALREAGEGLLFAFEDGFAVYDPFVADLSISTPPKYL
SASDYVEGHSYHRHGQVRLNDGRCDRHGRFIAGGYNGDEGDAEAGREWEC
ICGVYVVETQASTTGKREAAGEKKETKMVAREMFPFKVRCANSTAFSPDG
SVMYFADSPNREIWAFDYDWKAGRVKAESKRVFATIPSPGVPDGSCVDSE
GFVWNAEFFSGRVVRYSPEGNVDRVLQLPVSRVTCPCLGGADLKTMYMTC
ASAGIERGTEEGSGGLWALEVETPGLPEARFRG*
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Synonyms
Publications