NO16G03180, NO16G03180 (gene) Nannochloropsis oceanica

Overview
NameNO16G03180
Unique NameNO16G03180
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2340
Alignment locationchr16:956320..958659 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:956320..958659 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO16G03180 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL155nonsL155Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR032ngnoR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G03180.1NO16G03180.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G03180.1NO16G03180.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G03180 ID=NO16G03180|Name=NO16G03180|organism=Nannochloropsis oceanica|type=gene|length=2340bp
ATGGACGACGGCCCTGACCCGCCCACCTTTCGCACGCCCTCCTTCATCCA
CTCCTCCTCCTCTTCTGACACTCACCACCCGCAACCCTCTCCTCAGCCGC
CTCCCAACAAGAAGCAGCTGCAGCTCTCCCATCTCCCTTACCGCCTGCTC
AACAACCACCACCACCATCATCAGTATAAGCAGCAGCAGCAGCAGCAGCA
GCGGATGAGCGGAGACCTTGCTCGTTTACAGAAAAGTGTCGTCTCCTGGA
GGCCCCTGGAGAAGGGTAAGGAACGTACGGAGGGAAGAAGGGAAGCAGTG
GGAGGGTCTGGAGGGCAAGAAGGgtcagaaagagatagaggagaacgaag
aggaggtaaagaagggagagaaggaaggggaggagagaaggggggggggg
gacgctagcgagtgtttttgggggactctacagCCAGGAAATCGGAGGGC
TACAGAGCCGCTCTTCCACCTCCCGATGGCAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACA
ACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC
AACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAA
CAACAACAACAACAACAACAACAACAACAACAGCAGCAGCAGCAGCAGAG
GGAAGTGAAAGAGGAAGATATGGCGGAGGTGGAACGAGGACAAGAGATCC
GGTTTTACGATGAGGGTCAGCGCATGCGGGAGGAGGCGGAGGACGGAGAA
GAAGAAGGAGATGGAGGAGGAGGAGGAGGAAGAGAGGACAGAGGAGGAGG
AGGAAGAGGAAACGAGGGTGGCTTTTCCCTAGAGCAGTTATCTTCCCTGg
tacagcccctaccctccttccatcgctctcgtccacctcatcctagcttc
ccgcagcagcagcgctttcctcgtcctcattcccctcctcacccccttcc
ccatcgtcgccgcttctccgagttcctggactcaagccctccctcctccg
acctcgactccttccgccgcaagctcaaccagtcgcgccccctccctcct
tcctccaccctcaactctgctgcctccttcgaacccccccctcctcccca
tctttctcgtccgcttccaccgctgtcgccccgttctccctggcagccct
tctgaatcctcatgccagAAAAACGAGGTATCGCGACCCCCCAACACTCC
TTCCCCCCGTCAACGCCCCCTCCCTTCACCACCACATCCGCCCGCCCTCC
CCTCCTTCCCCTTCCTCCGTCCTTCTCCCTCCCCGTCCTACCCCCCCCTT
CCCTCCCCCTCCCCCTCTGGCATCCTCCTCCCGCCTGCTACCGGGCATCC
TCCCCTCCACACCTCCTCCTCCACCTCCGCCGCCTCCTCTTCCTCCCTCC
TGTCCTCATGGGGCCTTTTTGACGAGAGAGAAGCTCACAACTCACGCCAG
CGACGTATCCTTCAATTAAGGGATGGAGATGAAGGTGAAAAAGATGAGGA
GGAGGAGGAGGAGGAGGAGGAGGACGACGACGACAACTTTGGATGTTGCG
GGGGCGGAGAAAAGGAAGGAGGAATGGGAAGAGGAAGGGGCAAGGGGCAA
CCGCAGCAGCAGCAACAACAACAACAGCAGCAGCAGCAACAGCAGCAACA
GCAACGGCAGCTGGCGCCACCGACTAGCCCGCCTTCGATCATCTTTCCTT
CTTCACGATCGCTGAAGGATGAGGGAGGGAAGGAGGGAGAAAAGGAGAAC
GCGAGGGAGGAAGGGAAAAAGGACAATGCCGAGCCCAGCGACAGAGAGAA
GGAAAATGACCCCCTGGCGTGCCAGGGGATGAAGTTTGCGCAAAGACTGA
AAGGGGAAGACGAAAGAGAGGGACGGGAGGAGAGAAGGGAAGTGTCGTCG
GTGGCATCGTCGAGGGAACAACAGAAGCAGAAGGTAGAGGAGGAGGGGGA
GCGGAGGGTACTGGTGGCAAAGAGGGATGAGGGCAATGTCACAGGCATTT
TTCTACCTCCCCACAACCCACCTCGCCCAGCCCAGCAGCAGCAGCAGCAG
CAGCCGCCTCTTTGCTCTACTCCCCTCCTCCAAACCCGTTCTACCCTCTC
TTCTCTCCGCTCCACTGCTGCCCCTCCTCCCTCCTTCCCTCCCTCCTCCT
CCCTCGTTTCTCCTCCTCCCGCCCCTCGTCTGCGCCCTACTCCCACCAAA
CGCACCCCCACTGTTCTTGAGCTTATGGAGGGCGAGCCGCAGGGGAGGGA
GGGGGGGAAGGAGGGGGAGTCGAGGACGTATGGGCCATGA
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protein sequence of NO16G03180.1

>NO16G03180.1-protein ID=NO16G03180.1-protein|Name=NO16G03180.1|organism=Nannochloropsis oceanica|type=polypeptide|length=637bp
MDDGPDPPTFRTPSFIHSSSSSDTHHPQPSPQPPPNKKQLQLSHLPYRLL
NNHHHHHQYKQQQQQQQRMSGDLARLQKSVVSWRPLEKGKERTEGRREAV
GGSGGQEGQEIGGLQSRSSTSRWQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQREVK
EEDMAEVERGQEIRFYDEGQRMREEAEDGEEEGDGGGGGGREDRGGGGRG
NEGGFSLEQLSSLKNEVSRPPNTPSPRQRPLPSPPHPPALPSFPFLRPSP
SPSYPPLPSPSPSGILLPPATGHPPLHTSSSTSAASSSSLLSSWGLFDER
EAHNSRQRRILQLRDGDEGEKDEEEEEEEEEDDDDNFGCCGGGEKEGGMG
RGRGKGQPQQQQQQQQQQQQQQQQQRQLAPPTSPPSIIFPSSRSLKDEGG
KEGEKENAREEGKKDNAEPSDREKENDPLACQGMKFAQRLKGEDEREGRE
ERREVSSVASSREQQKQKVEEEGERRVLVAKRDEGNVTGIFLPPHNPPRP
AQQQQQQQPPLCSTPLLQTRSTLSSLRSTAAPPPSFPPSSSLVSPPPAPR
LRPTPTKRTPTVLELMEGEPQGREGGKEGESRTYGP*
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Synonyms
Publications