NO16G03120, NO16G03120 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G03120 vs. NCBI_GenBank
Match: EWM24629.1 (hypothetical protein Naga_100117g18 [Nannochloropsis gaditana]) HSP 1 Score: 308.5 bits (789), Expect = 4.900e-80 Identity = 160/260 (61.54%), Postives = 199/260 (76.54%), Query Frame = 0 Query: 42 SSTHSASTRHLKPV--KGIQDRDDFHILLFASFCLCFNAAFTNTVTMSSFLELSTAHVTGLVAKTSIALADADFDYVYLPAVTFLFFLVGSILSGFTISYDTFYLGRGYGRNLILIASLQGLALVIHQLKAIPSTGRHEFLWACALAMGCQNGLTSKYSGNTLRTTHVTGPTTDLGIALGHLLKGRWEDLWKVKLHTTAIIGFLLGGVGGRLAYLSIQEMALLFNITLLLVLGFMHLTFLSCQENTSILKVAASRRDIKV 300 S AS R L+ V + IQDRDDFHILLF SFCLCFNA+F N VT SS+L+L+TAHVTGLVA+ S +AD + VYLP FL FLVGS++ G+T+S++TFYLGR YGR L+ IA LQG ALV++++ +H +++ CA+AMG QN LTSKYSGNTLRTTHVTG TTDLGIA+GHLLKGR DLWKVKLH+TAI+GFL+GGV GRLAYL +E ALLFN+T++ VLG HL ++S ++ S+ KV S D+KV Sbjct: 38 SPVKPASIRRLRLVSKRAIQDRDDFHILLFGSFCLCFNASFVNLVTFSSYLKLATAHVTGLVARASQTIADGAWQLVYLPISVFLCFLVGSVVGGYTVSHETFYLGRSYGRALLTIALLQGSALVVNKVHVDEGHVQHYYIYVCAVAMGLQNSLTSKYSGNTLRTTHVTGATTDLGIAIGHLLKGRRGDLWKVKLHSTAILGFLVGGVMGRLAYLRFEETALLFNVTIMTVLGLSHLLWISRRKGLSLWKVFKSTTDLKV 297
BLAST of NO16G03120 vs. NCBI_GenBank
Match: EWM23918.1 (Protein of unknown function DUF1275 [Nannochloropsis gaditana]) HSP 1 Score: 210.7 bits (535), Expect = 1.400e-50 Identity = 119/276 (43.12%), Postives = 168/276 (60.87%), Query Frame = 0 Query: 26 NQIPSPAMISRNVSKASSTHSASTRHLKPVKGIQDRDDFHILLFASFCLCFNAAFTNTVTMSSFLELSTAHVTGLVAKTSIALADADFDYVYLPAVTFLFFLVGSILSGFTISYDTFYLGRGYGRNLILIASLQGLALVIHQLKAIPSTGRHEFLWACALAMGCQNGLTSKYSGNTLRTTHVTGPTTDLGIALGHLLKGRWEDLWKVKLHTTAIIGFLLGGVGGRLAYLSIQEMALLFNITLLLVLGFMHLTFLSCQENTSILKVAASRRDIKVHR 302 N +P PA SK + R K +R F ++L ASF L NAAF N +T+++ +++AHVTGLVA+ S A D +Y A+T+ F+ GS SG ++ +TFYLGR YGR L LIA+++G+AL+ + P + F+W CA A G QNGLTSK+SGN +RTTH+TG +TDLGIA+GH+LKGR + WKVKLH A++GF +GG+ G Y + ALLFNI + L H +++ E S + V S+ DI++H+ Sbjct: 68 NDVPCPA------SKVNPPQGLQ-RQKSSYKNPGERPYFKVILTASFVLTINAAFINIITLNTVQAMASAHVTGLVARASYLAATGRMDVLYQYALTWASFVAGSCTSGVIVAQETFYLGRNYGRALFLIAAVEGIALLTED--SYPDS--IFFIWLCAYACGLQNGLTSKFSGNAVRTTHLTGASTDLGIAMGHILKGRQGEWWKVKLHGVAVLGFFVGGILGFFTYRRFRHSALLFNIGITTTLAVAHTLYIAYHEGISPITVLESKTDIRMHK 332
BLAST of NO16G03120 vs. NCBI_GenBank
Match: WP_067729867.1 (DUF1275 domain-containing protein [Acinetobacter sp. NCu2D-2] >ANF81798.1 hypothetical protein A3K93_06080 [Acinetobacter sp. NCu2D-2]) HSP 1 Score: 119.4 bits (298), Expect = 4.200e-23 Identity = 74/205 (36.10%), Postives = 113/205 (55.12%), Query Frame = 0 Query: 71 SFCLCFNAAFTNTVTMSSFLELSTAHVTGLVAKTSIALADADFDYVYLPAVTFLFFLVGSILSGFTISYDTFYLGRGYGRNLILIASLQGLALVIHQLKAIPSTGRHEFLWACALAMGCQNGLTSKYSGNTLRTTHVTGPTTDLGIALGHLLKGRWEDLWKVKLHTTAIIGFLLGGVGGRLAYLSIQEMALLFNITLLLVLGFMH 276 +F L FNA N + + + L S +H+TG V+ +AL D V A+ + FL+GS++SG + FYLG YG L L+A L ++ +P ++ L+AC +AMG QN + S Y G +RTTH++G TDLG+A G+ L+G D +V LH ++GFLLGG+ Y S++ A L L L++ ++ Sbjct: 14 AFFLAFNAGMINVLGLITVLHQSVSHMTGNVSMLGMALLAGHIDQVIYLAIVIVCFLIGSLISGLILGNSHFYLGLRYGYPLSLVAFFIVLCWLL-----LPYVPQYALLFAC-VAMGIQNAMVSHYKGAIIRTTHLSGVLTDLGLAFGYRLRGLVLDTKRVILHVLILLGFLLGGILASWIYPSLKLNAFLIPAVLSLIMSLVY 212
BLAST of NO16G03120 vs. NCBI_GenBank
Match: WP_044433233.1 (DUF1275 domain-containing protein [Acinetobacter ursingii]) HSP 1 Score: 118.6 bits (296), Expect = 7.200e-23 Identity = 77/207 (37.20%), Postives = 111/207 (53.62%), Query Frame = 0 Query: 69 FASFCLCFNAAFTNTVTMSSFLELSTAHVTGLVAKTSIALADADFDYVYLPAVTFLFFLVGSILSGFTISYDTFYLGRGYGRNLILIASLQGLALVIHQLKAIPSTGRHEFLWACALAMGCQNGLTSKYSGNTLRTTHVTGPTTDLGIALGHLLKGRWEDLWKVKLHTTAIIGFLLGGVGGRLAYLSIQEMALLFNITLLLVLGFMH 276 FA+F L NA N +++ + L S +H+TG V+ ++ L D + + F++GS SGF + F LGR YG L L+A L + I L +P R+ LWACA AMG QN + S Y G +RTTH++G TD+G+ALG+ +G D ++ LH +IGF LGGV L + + A L TL L+L + Sbjct: 12 FAAFLLAMNAGMINVLSLITVLHQSISHMTGNVSMLAMDLVDWKVHNIIYLVFVIICFVLGSFYSGFILGNSQFQLGRRYGIPLSLVA----LFIFISWL-LLPYFPRYGLLWACA-AMGIQNAMVSHYKGTIIRTTHLSGVLTDIGLALGYKARGLPLDKRRITLHLLILIGFFLGGVAAALIHPLLSIQAFLVPATLSLILSIAY 212
BLAST of NO16G03120 vs. NCBI_GenBank
Match: XP_016606529.1 (permease, variant 1 [Spizellomyces punctatus DAOM BR117] >XP_016606530.1 permease [Spizellomyces punctatus DAOM BR117] >XP_016606527.1 permease, variant 3 [Spizellomyces punctatus DAOM BR117] >XP_016606528.1 permease, variant 2 [Spizellomyces punctatus DAOM BR117] >KNC98487.1 permease, variant 3 [Spizellomyces punctatus DAOM BR117] >KNC98488.1 permease, variant 2 [Spizellomyces punctatus DAOM BR117] >KNC98489.1 permease, variant 1 [Spizellomyces punctatus DAOM BR117] >KNC98490.1 permease [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 118.6 bits (296), Expect = 7.200e-23 Identity = 78/263 (29.66%), Postives = 136/263 (51.71%), Query Frame = 0 Query: 63 DFHILLFASFCLCFNAAFTNTVTMSSFLELSTAHVTGLVAKTSIALADADFDYVYLPAVTFLFFLVGSILSGFTISYDTFYLGRGYGRNLILIASLQGLALVIHQLKAIPSTGRHEFLWACALAMGCQNGLTSKYSGNTLRTTHVTGPTTDLGIALGHLLK-GRWEDLWKVKLHTTAIIGFLLGGVGGRLAYLSIQEMALLFNITLLLVLGFMHLTFLSCQENTSILKVAASRRDIKVHRFHHRSRSSLGLPPSLPLRSVSFP 325 +F+ ++ L NA F N VT++ ++ +H TG V++ ++AL +AD + L ++ GS ++GF + + F LGRGYG LIL ++ + V + + I W A A G QN L + YSG +RTTH+TG TD+G LG + +LW++K+H +I +L+GG+ G+L+Y + E +LL + ++L+ +E T++L+ A++ + +G P++ +R V P Sbjct: 8 EFNSIVIGGSVLALNAGFINVVTLAGVFTVTVSHHTGNVSRIAMALLNADITTLALVTSILFSYMFGSFIAGFMVGDNKFRLGRGYGYALILESACLFASFVFLRRELIVGE------WCAAFACGLQNALATSYSGAVVRTTHMTGICTDIGNILGQACRLDTKAELWRLKVHVPLLISYLIGGILGQLSYSFLHEKSLLLPCFFTGGVACVYLSLPFVKEATAVLQETAAQMGL------------VGAHPAVEVRIVGDP 252
BLAST of NO16G03120 vs. NCBI_GenBank
Match: WP_004987763.1 (MULTISPECIES: DUF1275 domain-containing protein [Acinetobacter] >ENV76880.1 hypothetical protein F944_00738 [Acinetobacter ursingii DSM 16037 = CIP 107286] >ENV78939.1 hypothetical protein F942_02361 [Acinetobacter ursingii ANC 3649] >ENX47851.1 hypothetical protein F943_02517 [Acinetobacter ursingii NIPH 706] >EXD37062.1 hypothetical protein J500_0971 [Acinetobacter sp. 479375] >PPZ93390.1 DUF1275 domain-containing protein [Acinetobacter ursingii]) HSP 1 Score: 118.2 bits (295), Expect = 9.400e-23 Identity = 77/207 (37.20%), Postives = 111/207 (53.62%), Query Frame = 0 Query: 69 FASFCLCFNAAFTNTVTMSSFLELSTAHVTGLVAKTSIALADADFDYVYLPAVTFLFFLVGSILSGFTISYDTFYLGRGYGRNLILIASLQGLALVIHQLKAIPSTGRHEFLWACALAMGCQNGLTSKYSGNTLRTTHVTGPTTDLGIALGHLLKGRWEDLWKVKLHTTAIIGFLLGGVGGRLAYLSIQEMALLFNITLLLVLGFMH 276 FA+F L NA N +++ + L S +H+TG V+ ++ L D + + F++GS SGF + F LGR YG L L+A L + I L +P R+ LWACA AMG QN + S Y G +RTTH++G TD+G+ALG+ +G D ++ LH +IGF LGGV L + + A L TL L+L + Sbjct: 12 FAAFLLAMNAGMINVLSLITVLHQSISHMTGNVSMLAMDLVDWKVHNIIYLVFVIVCFVLGSFYSGFILGNSQFQLGRRYGIPLSLVA----LFIFISWL-LLPYFPRYGLLWACA-AMGIQNAMVSHYKGTIIRTTHLSGVLTDIGLALGYKARGLPLDKRRITLHLLILIGFFLGGVAAALIHPLLSIQAFLVPATLSLILSIAY 212
BLAST of NO16G03120 vs. NCBI_GenBank
Match: WP_039622263.1 (DUF1275 domain-containing protein [Acinetobacter harbinensis] >KWQ05133.1 hypothetical protein SE27_07620 [Acinetobacter harbinensis]) HSP 1 Score: 116.7 bits (291), Expect = 2.700e-22 Identity = 71/194 (36.60%), Postives = 107/194 (55.15%), Query Frame = 0 Query: 69 FASFCLCFNAAFTNTVTMSSFLELSTAHVTGLVAKTSIALADADFDYVYLPAVTFLFFLVGSILSGFTISYDTFYLGRGYGRNLILIASLQGLALVIHQLKAIPSTGRHEFLWACALAMGCQNGLTSKYSGNTLRTTHVTGPTTDLGIALGHLLKGRWEDLWKVKLHTTAIIGFLLGGVGGRLAYLSIQEMALL 263 +A+FCL NA N + + + L S +H+TG V+ ++A+ + + V A+ L +++GS SG + F LGR YG L L+A L +P R+ LWA A+AMG QN + S Y G +RTTH++G TDLG+ALG+ ++G W D +V LH + GFL+GG+ Y ++ A L Sbjct: 12 WAAFCLAVNAGMINVLGLLTVLHQSVSHMTGNVSMFAMAVLNGKLEAVIYLALVVLCYVIGSFYSGLILGNSQFSLGRRYGLPLSLVALFIVLCWFF-----LPYFPRYALLWA-AVAMGIQNAMVSHYKGTIIRTTHLSGVLTDLGLALGYRVRGLWVDRRRVILHLAILSGFLVGGLLASWLYPHLKLNAFL 199
BLAST of NO16G03120 vs. NCBI_GenBank
Match: WP_077168498.1 (DUF1275 domain-containing protein [Acinetobacter genomosp. 33YU] >ONN56606.1 hypothetical protein AC058_02770 [Acinetobacter genomosp. 33YU]) HSP 1 Score: 116.3 bits (290), Expect = 3.600e-22 Identity = 73/217 (33.64%), Postives = 116/217 (53.46%), Query Frame = 0 Query: 71 SFCLCFNAAFTNTVTMSSFLELSTAHVTGLVAKTSIALADADFDYVYLPAVTFLFFLVGSILSGFTISYDTFYLGRGYGRNLILIASLQGLALVIHQLKAIPSTGRHEFLWACALAMGCQNGLTSKYSGNTLRTTHVTGPTTDLGIALGHLLKGRWEDLWKVKLHTTAIIGFLLGGVGGRLA--YLSIQEMALLFNITLLLVLGFMHLTFLSCQENT 286 +F L NA N + + + L S +H+TG V+ +++L + F+++ + L ++ GS SGF + F LGR YG L L+A + H +P ++ LWAC +AMG QN + S Y G +RTTH++G TDLG+ALG++ +G + ++ LH GFLLGG+ L YL +Q L ++L L + + + F S N+ Sbjct: 14 AFLLAINAGMINVLGLITLLHQSVSHMTGNVSMLAMSLVNWQFEHIIYLVLVILCYVCGSFYSGFILGNSHFKLGRRYGLPLSLVA-----LFIFHCWLLLPYFPKYGLLWAC-VAMGLQNAMVSHYKGTIIRTTHLSGVLTDLGLALGYMARGLKVENRRIILHLLIFSGFLLGGIIAALVHPYLKLQAFLLPAILSLTLSISYWVVYFHSSSSNS 224
BLAST of NO16G03120 vs. NCBI_GenBank
Match: ORY48517.1 (DUF1275-domain-containing protein [Rhizoclosmatium globosum]) HSP 1 Score: 115.9 bits (289), Expect = 4.700e-22 Identity = 74/235 (31.49%), Postives = 125/235 (53.19%), Query Frame = 0 Query: 63 DFHILLFASFCLCFNAAFTNTVTMSSFLELSTAHVTGLVAKTSIALADADFDYVYLPAVTFLFFLVGSILSGFTISYDTFYLGRGYGRNLILIASLQGLALVIHQLKAIPSTGRHEFLWACALAMGCQNGLTSKYSGNTLRTTHVTGPTTDLGIALGHLLK-GRWEDLWKVKLHTTAIIGFLLGGVGGRLAYLSIQEMALLFN--ITLLLVLGFMHLTFLSC-----QENTSILK 290 +F+ ++F + L NA F N VT++ ++ +HVTG V++ +I++ D L F+ G+ +SG+ + F LGR YG L+L + + ++ + LK G W A A G QN + + YSG +RTTH+TG TD+G LG + ++W++ +H +I +++GGV G+LAY + E +LLF +T + + ++ L F+ QE +ILK Sbjct: 8 EFNTIVFGACILSANAGFINVVTLAGVFSVTVSHVTGNVSRVAISIFQGDLTTAALVTSILFSFMFGAFISGYMVGDHKFVLGRSYGYALLLESVMLFMSYI--SLKGELIVGE----WCAAFACGLQNAMATSYSGLVVRTTHMTGIATDIGNILGQACRQDSHAEVWRLYVHVPIMISYMVGGVFGQLAYYFLHEQSLLFPCFLTGITAVTYLSLPFIQAATQAHQEKQNILK 236
BLAST of NO16G03120 vs. NCBI_GenBank
Match: WP_035267535.1 (DUF1275 domain-containing protein [Acinetobacter sp. Ver3] >EZQ09911.1 hypothetical protein CL42_09480 [Acinetobacter sp. Ver3]) HSP 1 Score: 115.2 bits (287), Expect = 8.000e-22 Identity = 77/215 (35.81%), Postives = 109/215 (50.70%), Query Frame = 0 Query: 69 FASFCLCFNAAFTNTVTMSSFLELSTAHVTGLVAKTSIALADADFDYVYLPAVTFLFFLVGSILSGFTISYDTFYLGRGYGRNLILIASLQGLALVIHQLKAIPSTGRHEFLWACALAMGCQNGLTSKYSGNTLRTTHVTGPTTDLGIALGHLLKGRWEDLWKVKLHTTAIIGFLLGGVGGRLAYLSIQEMALLF--NITLLLVLGFMHLTFLSC 282 F +F L NA N + + S L S +H+TG + +I L D DF V+ + L +++GS SG + F LGR YG L L+ L V IP R+ LWAC AMG QN + S Y G +RTTH++G TDLG+A G+ ++G + KV LH + GF++G +Y +Q A L ++ LL L + L F C Sbjct: 12 FGAFMLAVNAGMINVLGLISLLHQSVSHMTGNASLLAIGLIDHDFKAVFFLILIILSYVLGSSFSGLILGNSQFKLGRRYGLPLSLVTLFILLCWVF-----IPYYPRYALLWACC-AMGVQNAMVSHYKGAIIRTTHLSGVLTDLGLAFGYFVRGLTTESRKVILHLVILFGFIIGSTVAAFSYPYLQLEAFLIPAGLSFLLTLIYWILYFRHC 220 The following BLAST results are available for this feature:
BLAST of NO16G03120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G03120 ID=NO16G03120|Name=NO16G03120|organism=Nannochloropsis oceanica|type=gene|length=5013bpback to top protein sequence of NO16G03120.1 >NO16G03120.1-protein ID=NO16G03120.1-protein|Name=NO16G03120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=664bpback to top Synonyms
Publications
|