NO16G03110, NO16G03110 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G03110 vs. NCBI_GenBank
Match: EWM24629.1 (hypothetical protein Naga_100117g18 [Nannochloropsis gaditana]) HSP 1 Score: 307.8 bits (787), Expect = 8.800e-80 Identity = 172/316 (54.43%), Postives = 218/316 (68.99%), Query Frame = 0 Query: 53 PHNQERESSGNPNNQWDNQIPSPATISRNDSKASSTHSVSTRHLKPV--KGFQDRDDFHILLFASFCLCFNAAFTNTVTMSSFLELSTAHVTGLVAKTSIALADADFDYVYLPAVTFLFFLVGSILSGFTISYDTFYLGRGYGRNLILIASLQGLALIIHQLKAIPSTGRHEFLWACALAMGCQNGLTSKYSGNTLRTTHVTGATTDLGIALGHLLKGRWEDLWKVKLHTTAIIGFLLGGVGGRLAYLSIQEMALLFNITLLLVLGLMHLTFLSWQENTSILKVAASRRDIKVHRFHHH-------PNSPAGSRSP 360 P Q+ +S Q Q + ++ + S S S R L+ V + QDRDDFHILLF SFCLCFNA+F N VT SS+L+L+TAHVTGLVA+ S +AD + VYLP FL FLVGS++ G+T+S++TFYLGR YGR L+ IA LQG AL+++++ +H +++ CA+AMG QN LTSKYSGNTLRTTHVTGATTDLGIA+GHLLKGR DLWKVKLH+TAI+GFL+GGV GRLAYL +E ALLFN+T++ VLGL HL ++S ++ S+ KV S D+KV H P SPA R P Sbjct: 5 PSIQDFQSRTFSIRQDSKQARNLESLRTSGSILSPVKPASIRRLRLVSKRAIQDRDDFHILLFGSFCLCFNASFVNLVTFSSYLKLATAHVTGLVARASQTIADGAWQLVYLPISVFLCFLVGSVVGGYTVSHETFYLGRSYGRALLTIALLQGSALVVNKVHVDEGHVQHYYIYVCAVAMGLQNSLTSKYSGNTLRTTHVTGATTDLGIAIGHLLKGRRGDLWKVKLHSTAILGFLVGGVMGRLAYLRFEETALLFNVTIMTVLGLSHLLWISRRKGLSLWKVFKSTTDLKVDMAPAHEPSPNETPTSPAEMREP 320
BLAST of NO16G03110 vs. NCBI_GenBank
Match: EWM23918.1 (Protein of unknown function DUF1275 [Nannochloropsis gaditana]) HSP 1 Score: 214.9 bits (546), Expect = 7.800e-52 Identity = 120/276 (43.48%), Postives = 172/276 (62.32%), Query Frame = 0 Query: 70 NQIPSPATISRNDSKASSTHSVSTRHLKPVKGFQDRDDFHILLFASFCLCFNAAFTNTVTMSSFLELSTAHVTGLVAKTSIALADADFDYVYLPAVTFLFFLVGSILSGFTISYDTFYLGRGYGRNLILIASLQGLALIIHQLKAIPSTGRHEFLWACALAMGCQNGLTSKYSGNTLRTTHVTGATTDLGIALGHLLKGRWEDLWKVKLHTTAIIGFLLGGVGGRLAYLSIQEMALLFNITLLLVLGLMHLTFLSWQENTSILKVAASRRDIKVHR 346 N +P PA SK + + R K +R F ++L ASF L NAAF N +T+++ +++AHVTGLVA+ S A D +Y A+T+ F+ GS SG ++ +TFYLGR YGR L LIA+++G+AL+ + P + F+W CA A G QNGLTSK+SGN +RTTH+TGA+TDLGIA+GH+LKGR + WKVKLH A++GF +GG+ G Y + ALLFNI + L + H ++++ E S + V S+ DI++H+ Sbjct: 68 NDVPCPA------SKVNPPQGLQ-RQKSSYKNPGERPYFKVILTASFVLTINAAFINIITLNTVQAMASAHVTGLVARASYLAATGRMDVLYQYALTWASFVAGSCTSGVIVAQETFYLGRNYGRALFLIAAVEGIALLTED--SYPDS--IFFIWLCAYACGLQNGLTSKFSGNAVRTTHLTGASTDLGIAMGHILKGRQGEWWKVKLHGVAVLGFFVGGILGFFTYRRFRHSALLFNIGITTTLAVAHTLYIAYHEGISPITVLESKTDIRMHK 332
BLAST of NO16G03110 vs. NCBI_GenBank
Match: WP_067729867.1 (DUF1275 domain-containing protein [Acinetobacter sp. NCu2D-2] >ANF81798.1 hypothetical protein A3K93_06080 [Acinetobacter sp. NCu2D-2]) HSP 1 Score: 120.9 bits (302), Expect = 1.500e-23 Identity = 75/205 (36.59%), Postives = 114/205 (55.61%), Query Frame = 0 Query: 115 SFCLCFNAAFTNTVTMSSFLELSTAHVTGLVAKTSIALADADFDYVYLPAVTFLFFLVGSILSGFTISYDTFYLGRGYGRNLILIASLQGLALIIHQLKAIPSTGRHEFLWACALAMGCQNGLTSKYSGNTLRTTHVTGATTDLGIALGHLLKGRWEDLWKVKLHTTAIIGFLLGGVGGRLAYLSIQEMALLFNITLLLVLGLMH 320 +F L FNA N + + + L S +H+TG V+ +AL D V A+ + FL+GS++SG + FYLG YG L L+A L ++ +P ++ L+AC +AMG QN + S Y G +RTTH++G TDLG+A G+ L+G D +V LH ++GFLLGG+ Y S++ A L L L++ L++ Sbjct: 14 AFFLAFNAGMINVLGLITVLHQSVSHMTGNVSMLGMALLAGHIDQVIYLAIVIVCFLIGSLISGLILGNSHFYLGLRYGYPLSLVAFFIVLCWLL-----LPYVPQYALLFAC-VAMGIQNAMVSHYKGAIIRTTHLSGVLTDLGLAFGYRLRGLVLDTKRVILHVLILLGFLLGGILASWIYPSLKLNAFLIPAVLSLIMSLVY 212
BLAST of NO16G03110 vs. NCBI_GenBank
Match: WP_044433233.1 (DUF1275 domain-containing protein [Acinetobacter ursingii]) HSP 1 Score: 119.0 bits (297), Expect = 5.800e-23 Identity = 77/207 (37.20%), Postives = 112/207 (54.11%), Query Frame = 0 Query: 113 FASFCLCFNAAFTNTVTMSSFLELSTAHVTGLVAKTSIALADADFDYVYLPAVTFLFFLVGSILSGFTISYDTFYLGRGYGRNLILIASLQGLALIIHQLKAIPSTGRHEFLWACALAMGCQNGLTSKYSGNTLRTTHVTGATTDLGIALGHLLKGRWEDLWKVKLHTTAIIGFLLGGVGGRLAYLSIQEMALLFNITLLLVLGLMH 320 FA+F L NA N +++ + L S +H+TG V+ ++ L D + + F++GS SGF + F LGR YG L L+A L + I L +P R+ LWACA AMG QN + S Y G +RTTH++G TD+G+ALG+ +G D ++ LH +IGF LGGV L + + A L TL L+L + + Sbjct: 12 FAAFLLAMNAGMINVLSLITVLHQSISHMTGNVSMLAMDLVDWKVHNIIYLVFVIICFVLGSFYSGFILGNSQFQLGRRYGIPLSLVA----LFIFISWL-LLPYFPRYGLLWACA-AMGIQNAMVSHYKGTIIRTTHLSGVLTDIGLALGYKARGLPLDKRRITLHLLILIGFFLGGVAAALIHPLLSIQAFLVPATLSLILSIAY 212
BLAST of NO16G03110 vs. NCBI_GenBank
Match: WP_004987763.1 (MULTISPECIES: DUF1275 domain-containing protein [Acinetobacter] >ENV76880.1 hypothetical protein F944_00738 [Acinetobacter ursingii DSM 16037 = CIP 107286] >ENV78939.1 hypothetical protein F942_02361 [Acinetobacter ursingii ANC 3649] >ENX47851.1 hypothetical protein F943_02517 [Acinetobacter ursingii NIPH 706] >EXD37062.1 hypothetical protein J500_0971 [Acinetobacter sp. 479375] >PPZ93390.1 DUF1275 domain-containing protein [Acinetobacter ursingii]) HSP 1 Score: 118.6 bits (296), Expect = 7.600e-23 Identity = 77/207 (37.20%), Postives = 112/207 (54.11%), Query Frame = 0 Query: 113 FASFCLCFNAAFTNTVTMSSFLELSTAHVTGLVAKTSIALADADFDYVYLPAVTFLFFLVGSILSGFTISYDTFYLGRGYGRNLILIASLQGLALIIHQLKAIPSTGRHEFLWACALAMGCQNGLTSKYSGNTLRTTHVTGATTDLGIALGHLLKGRWEDLWKVKLHTTAIIGFLLGGVGGRLAYLSIQEMALLFNITLLLVLGLMH 320 FA+F L NA N +++ + L S +H+TG V+ ++ L D + + F++GS SGF + F LGR YG L L+A L + I L +P R+ LWACA AMG QN + S Y G +RTTH++G TD+G+ALG+ +G D ++ LH +IGF LGGV L + + A L TL L+L + + Sbjct: 12 FAAFLLAMNAGMINVLSLITVLHQSISHMTGNVSMLAMDLVDWKVHNIIYLVFVIVCFVLGSFYSGFILGNSQFQLGRRYGIPLSLVA----LFIFISWL-LLPYFPRYGLLWACA-AMGIQNAMVSHYKGTIIRTTHLSGVLTDIGLALGYKARGLPLDKRRITLHLLILIGFFLGGVAAALIHPLLSIQAFLVPATLSLILSIAY 212
BLAST of NO16G03110 vs. NCBI_GenBank
Match: WP_017390550.1 (DUF1275 domain-containing protein [Acinetobacter calcoaceticus]) HSP 1 Score: 117.1 bits (292), Expect = 2.200e-22 Identity = 73/216 (33.80%), Postives = 115/216 (53.24%), Query Frame = 0 Query: 115 SFCLCFNAAFTNTVTMSSFLELSTAHVTGLVAKTSIALADADFDYVYLPAVTFLFFLVGSILSGFTISYDTFYLGRGYGRNLILIASLQGLALIIHQLKAIPSTGRHEFLWACALAMGCQNGLTSKYSGNTLRTTHVTGATTDLGIALGHLLKGRWEDLWKVKLHTTAIIGFLLGGVGGRLAYLSIQEMALLFNITLLLVLGLMHLTFLSWQENTS 331 +F L FNA N + + + L S +H+TG V+ +++L + +++ + + ++ GS SGF + F LGR YG L L+A L ++ +P R+ LWAC AMG QN + S Y G +RTTH++G TD+G+ALG+ +G + ++ LH GFLLGG+ L Y ++ A L TL LVL + + + +TS Sbjct: 14 AFLLAFNAGMINVLGLITLLHQSISHMTGNVSMLAMSLVEWQPEHIIFLLLVIICYICGSFYSGFILGSSHFRLGRRYGLPLSLVALFIFLCWLL-----LPYFPRYGLLWACT-AMGLQNAMVSHYKGTIIRTTHLSGVLTDIGLALGYKARGLPVENRRIVLHLLIFAGFLLGGILAALVYPHLKLQAFLLPTTLSLVLSISYWVVYFYSPSTS 223
BLAST of NO16G03110 vs. NCBI_GenBank
Match: XP_016606529.1 (permease, variant 1 [Spizellomyces punctatus DAOM BR117] >XP_016606530.1 permease [Spizellomyces punctatus DAOM BR117] >XP_016606527.1 permease, variant 3 [Spizellomyces punctatus DAOM BR117] >XP_016606528.1 permease, variant 2 [Spizellomyces punctatus DAOM BR117] >KNC98487.1 permease, variant 3 [Spizellomyces punctatus DAOM BR117] >KNC98488.1 permease, variant 2 [Spizellomyces punctatus DAOM BR117] >KNC98489.1 permease, variant 1 [Spizellomyces punctatus DAOM BR117] >KNC98490.1 permease [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 117.1 bits (292), Expect = 2.200e-22 Identity = 72/233 (30.90%), Postives = 126/233 (54.08%), Query Frame = 0 Query: 107 DFHILLFASFCLCFNAAFTNTVTMSSFLELSTAHVTGLVAKTSIALADADFDYVYLPAVTFLFFLVGSILSGFTISYDTFYLGRGYGRNLILIASLQGLALIIHQLKAIPSTGRHEFLWACALAMGCQNGLTSKYSGNTLRTTHVTGATTDLGIALGHLLK-GRWEDLWKVKLHTTAIIGFLLGGVGGRLAYLSIQEMALLFNITLLLVLGLMHLTFLSWQENTSILKVAASR 339 +F+ ++ L NA F N VT++ ++ +H TG V++ ++AL +AD + L ++ GS ++GF + + F LGRGYG LIL ++ + + + + I W A A G QN L + YSG +RTTH+TG TD+G LG + +LW++K+H +I +L+GG+ G+L+Y + E +LL + ++L+ +E T++L+ A++ Sbjct: 8 EFNSIVIGGSVLALNAGFINVVTLAGVFTVTVSHHTGNVSRIAMALLNADITTLALVTSILFSYMFGSFIAGFMVGDNKFRLGRGYGYALILESACLFASFVFLRRELIVGE------WCAAFACGLQNALATSYSGAVVRTTHMTGICTDIGNILGQACRLDTKAELWRLKVHVPLLISYLIGGILGQLSYSFLHEKSLLLPCFFTGGVACVYLSLPFVKEATAVLQETAAQ 234
BLAST of NO16G03110 vs. NCBI_GenBank
Match: WP_080026935.1 (DUF1275 domain-containing protein [Acinetobacter calcoaceticus] >AQZ81642.1 DUF1275 family protein [Acinetobacter calcoaceticus]) HSP 1 Score: 117.1 bits (292), Expect = 2.200e-22 Identity = 73/216 (33.80%), Postives = 115/216 (53.24%), Query Frame = 0 Query: 115 SFCLCFNAAFTNTVTMSSFLELSTAHVTGLVAKTSIALADADFDYVYLPAVTFLFFLVGSILSGFTISYDTFYLGRGYGRNLILIASLQGLALIIHQLKAIPSTGRHEFLWACALAMGCQNGLTSKYSGNTLRTTHVTGATTDLGIALGHLLKGRWEDLWKVKLHTTAIIGFLLGGVGGRLAYLSIQEMALLFNITLLLVLGLMHLTFLSWQENTS 331 +F L FNA N + + + L S +H+TG V+ +++L + +++ + + ++ GS SGF + F LGR YG L L+A L ++ +P R+ LWAC AMG QN + S Y G +RTTH++G TD+G+ALG+ +G + ++ LH GFLLGG+ L Y ++ A L TL LVL + + + +TS Sbjct: 14 AFLLAFNAGMINVLGLITLLHQSISHMTGNVSMLAMSLVEWQPEHIIFLLLVIICYICGSFYSGFILGSSHFRLGRRYGLPLSLVALFIFLCWLL-----LPYFPRYGLLWACT-AMGLQNAMVSHYKGTIIRTTHLSGVLTDIGLALGYKARGLPVENRRIVLHLLIFAGFLLGGILAALVYPHLKLQAFLLPATLSLVLSISYWVVYFYSPSTS 223
BLAST of NO16G03110 vs. NCBI_GenBank
Match: WP_005041137.1 (MULTISPECIES: DUF1275 domain-containing protein [Acinetobacter] >ENV93401.1 hypothetical protein F937_02800 [Acinetobacter calcoaceticus ANC 3680] >KJH64242.1 hypothetical protein UF12_04635 [Acinetobacter calcoaceticus] >KQQ76637.1 hypothetical protein ASF86_03790 [Acinetobacter sp. Leaf130]) HSP 1 Score: 116.7 bits (291), Expect = 2.900e-22 Identity = 73/216 (33.80%), Postives = 115/216 (53.24%), Query Frame = 0 Query: 115 SFCLCFNAAFTNTVTMSSFLELSTAHVTGLVAKTSIALADADFDYVYLPAVTFLFFLVGSILSGFTISYDTFYLGRGYGRNLILIASLQGLALIIHQLKAIPSTGRHEFLWACALAMGCQNGLTSKYSGNTLRTTHVTGATTDLGIALGHLLKGRWEDLWKVKLHTTAIIGFLLGGVGGRLAYLSIQEMALLFNITLLLVLGLMHLTFLSWQENTS 331 +F L FNA N + + + L S +H+TG V+ +++L + +++ + + ++ GS SGF + F LGR YG L L+A L ++ +P R+ LWAC AMG QN + S Y G +RTTH++G TD+G+ALG+ +G + ++ LH GFLLGG+ L Y ++ A L TL LVL + + + +TS Sbjct: 14 AFLLAFNAGMINVLGLITLLHQSISHMTGNVSMLAMSLVEWQPEHIIFLLLVIICYVCGSFYSGFILGSSHFRLGRRYGLPLSLVALFIFLCWLL-----LPYFPRYGLLWACT-AMGLQNAMVSHYKGTIIRTTHLSGVLTDIGLALGYKARGLPVENRRIVLHLLIFAGFLLGGILAALVYPHLKLQAFLLPATLSLVLSISYWVVYFYSPSTS 223
BLAST of NO16G03110 vs. NCBI_GenBank
Match: WP_005047473.1 (DUF1275 domain-containing protein [Acinetobacter calcoaceticus] >ENV99211.1 hypothetical protein F936_02294 [Acinetobacter calcoaceticus DSM 30006 = CIP 81.8]) HSP 1 Score: 116.7 bits (291), Expect = 2.900e-22 Identity = 72/216 (33.33%), Postives = 116/216 (53.70%), Query Frame = 0 Query: 115 SFCLCFNAAFTNTVTMSSFLELSTAHVTGLVAKTSIALADADFDYVYLPAVTFLFFLVGSILSGFTISYDTFYLGRGYGRNLILIASLQGLALIIHQLKAIPSTGRHEFLWACALAMGCQNGLTSKYSGNTLRTTHVTGATTDLGIALGHLLKGRWEDLWKVKLHTTAIIGFLLGGVGGRLAYLSIQEMALLFNITLLLVLGLMHLTFLSWQENTS 331 +F L FNA N + + + L S +H+TG V+ +++L + +++ + + ++ GS SGF + F LGR YG L L+A L ++ +P R+ LWAC AMG QN + S Y G +RTTH++G TD+G+ALG+ +G + ++ LH +GFLLGG+ L + ++ A L TL LVL + + + +TS Sbjct: 14 AFLLAFNAGMINVLGLITLLHQSISHMTGNVSMLAMSLVEWQPEHIIFLLLVIICYVCGSFYSGFILGSSHFRLGRRYGLPLSLVALFIFLCWLL-----LPYFPRYGLLWACT-AMGLQNAMISHYKGTIIRTTHLSGVLTDIGLALGYKARGLQVENRRIVLHLLIFVGFLLGGILAALVHPHLKLQAFLLPATLSLVLSISYWVVYFYSPSTS 223 The following BLAST results are available for this feature:
BLAST of NO16G03110 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G03110 ID=NO16G03110|Name=NO16G03110|organism=Nannochloropsis oceanica|type=gene|length=4493bpback to top protein sequence of NO16G03110.1 >NO16G03110.1-protein ID=NO16G03110.1-protein|Name=NO16G03110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=697bpback to top Synonyms
Publications
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