NO16G03080, NO16G03080 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G03080 vs. NCBI_GenBank
Match: EWM25479.1 (hypothetical protein Naga_100207g1 [Nannochloropsis gaditana]) HSP 1 Score: 323.2 bits (827), Expect = 3.100e-84 Identity = 180/372 (48.39%), Postives = 227/372 (61.02%), Query Frame = 0 Query: 13 WRKRWLALFVTVAMAGLVVGLIAAFKPEAFNGHK--------MQDGDALSTPGGVPSTVDKMVETLPTTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLVDKPQLDIVKNTNADLLAGLLNSQSKESXXXXXXXXXXXXXXXXXDKQKEKGKFLQQLVQATSILGATTLQGGCMPADGMELRRMVEDPNACTIITLRPGKVYNVALEGKADDITVRSRKVIIGNPISLPTIDGTASKRIFHVVSGGSLDLQFLRTYRGSGELIATIPVLRGGTALVELGGRISAFGVVFTNAPPVGVPPFLVGADLSRAVRVFGGQIFNAGGIMTITLSHFWVLQPGVLLRELYVVGGDVLMVSGVAVFSGCTFTNSQ 377 W+K L LF +A GL+ G++ AF+PE + + +++ ++ T PS DK P A L LD V ++DL+ G+ ++ + F +++ TS++ + C+P GMELR+M EDP+ C II+L PGK+YNVAL DDIT+ +RKVIIGNPISLPTIDG SKRIFH+V+GG+LDLQF+RTYRG GELIATIPVLRGGTALVELGGR SAFGV+FTNAPPVG+P L+ D+SRAVRVFGGQ+F GGI+TITLSHFWVLQPGVL RE+YVVG D+L+V+GVAV SG TFTNSQ Sbjct: 18 WKKSLLVLFAALATIGLIAGIVIAFQPEEKHASQSPAPADGVVEEASSIETVVPPPSPADK----APIVA------------EPVEPEEVSTESLPDGPGGSLPGYKVLDGVAEKSSDLIGGVFGEEAGAA----------------------SEDFFSTMLKDTSLISGS----ACVPQSGMELRQMAEDPSRCAIISLLPGKIYNVALPDSDDDITISTRKVIIGNPISLPTIDGADSKRIFHIVAGGNLDLQFVRTYRGGGELIATIPVLRGGTALVELGGRFSAFGVIFTNAPPVGMPAILIAPDVSRAVRVFGGQVFVTGGIVTITLSHFWVLQPGVLFREIYVVGADLLVVAGVAVLSGVTFTNSQ 347
BLAST of NO16G03080 vs. NCBI_GenBank
Match: EWM25365.1 (hypothetical protein Naga_100005g1 [Nannochloropsis gaditana]) HSP 1 Score: 229.2 bits (583), Expect = 6.000e-56 Identity = 143/414 (34.54%), Postives = 223/414 (53.86%), Query Frame = 0 Query: 650 VTPLGKNKTRLLLPEEEEVVASAAVASLNILKGANTVNDGTPSPLLAQLQNSALGE-GMLPFETVYANVNGDGTTCNACGFEGDMATQFIGNAAGACSNTESAGASCSLPGVQVMRGDGQTGPLPSWMLKAAGHFDKSSGKTTPLDTSIISAVFKVGCSPTAAKDATTTLTHCLDAAAVINAIKASLGTDCARMNLQAKNAMMHPDID--MQDNWANYFADSAHTDVYDLAFTTHDAACTTQVTEWVKGFAPEEFLGTLD--APGNVKLEATDVTLEMQHFVRGMDLHGAAKEVLANMVAAVADTGLPTVLVQGMDEGTGSAVGRFALPKVASGSTANVALANFFDDKPVAMELTTKCMAVAAKDAVVALGSFKPADQ----LAVQIPAGTSPGTYSLRASQNGLFWCSQPIDV 1055 V PL + E ++ +S +L+G NT + GTP+ + +++S LG G +T YA VNG CN CGF+G+M Q +G AGAC +E ++CSL V+V+ DG LP W+ +A+ +D+SS +DT + +A+ K+GCS A + C + + +AI +LG DCAR+N+Q KN++ HP++ N +F DS T+VYDL+FTTHD C ++WVK F +F L P +V ++ ++ H VRGM L A+ V++++V A++ +PTVLV TG R ALP + G T V ++ F PV + LT KC ++ D + +G P + + ++PA +P TYS++A+Q + +C+QP DV Sbjct: 45 VQPLAAELEDFEIASAESQASAIPASSFTVLEGENTFSAGTPNAFVQAVKDSPLGSVGTNTPQTHYAAVNGP-IACNPCGFKGNMNKQIVGENAGACELSEEELSACSLEDVRVLGTDGTAQALPKWIKQASNLYDESSADMPLIDTQVTTAILKLGCS----SSAESVPEQCAQPSDLQSAISKALGDDCARVNVQKKNSIRHPELQEFALSNAEAFFKDSELTEVYDLSFTTHDDECAVLASDWVKQFKAADFASVLGEMLPVDVLIDESNADFVTTHKVRGMALPQASSTVMSSVVGALSGNMVPTVLV---STETGE---RLALPTFSQGETGKVMISGFSSTAPVGLTLTKKCGLGSSDD--IPIGQIVPKGKGSLTVPFEVPADLAPQTYSIKATQFAVSFCTQPFDV 445
BLAST of NO16G03080 vs. NCBI_GenBank
Match: EWM26817.1 (Pectin lyase fold/virulence factor [Nannochloropsis gaditana]) HSP 1 Score: 112.8 bits (281), Expect = 6.300e-21 Identity = 75/202 (37.13%), Postives = 109/202 (53.96%), Query Frame = 0 Query: 180 GCMPADGMELRRMVEDPNACTIITLRPGKVYNVALEGKADDITVRSRKVIIGNPISLPTIDGTASKRIFHVVSGGSLDLQFLRTYRGSGELIA--TIPVLRGGTALVELGGRISAFG-VVFTNAPPVGVPPFLVGADLSRAVRVFGGQIFNAGGIMTITLSHFWVLQPGVLLRELYVVGGDVLMVSGVAVFSGCTFTNSQLF 379 GC P G++LR +VE +C +ITL PG Y + ++I VR VIIG P++LP ID R F V + G LDL+F++ +RG + LRGG A + GG G ++ + VG L+ +DL R++GG + G + + H + +PGVLLRE+Y VGG +L+VSG +G T T + LF Sbjct: 187 GCTPDTGVQLRSLVE-TGSCPVITLTPGVRYVL-----DEEIHVRRAVVIIGRPLTLPVIDAHLIARAFSVEAKGRLDLRFVKVWRGVPMAVVDEVYLELRGGVAWIREGGEGVFTGCLMLVHDDEVG--DVLLASDLRVTARLYGGFLLLEAGTLRVRDCHMLLQRPGVLLREVYTVGGYILVVSGNLFMTGSTMTANFLF 380
BLAST of NO16G03080 vs. NCBI_GenBank
Match: EWM22289.1 (Pectin lyase fold/virulence factor [Nannochloropsis gaditana]) HSP 1 Score: 97.1 bits (240), Expect = 3.600e-16 Identity = 64/208 (30.77%), Postives = 102/208 (49.04%), Query Frame = 0 Query: 180 GCMPADGMELRRMVEDPNACTIITLRPGKVYNVALEGKADDITVRSRKVIIGNPISLPTIDGTASKRIFHVVSGGSLDLQFLRTYRGSGELIATIPV----LRGGTALVELGGRISAFGVVFTNAPPVGVPPFLVGADLSRAVRVFGGQIFNAGGIMTITLSHFWVLQPGVLLRELYVVGGDVLMVSGVAVFSGCTFTNSQLFLNGFG 384 GC P + ELR M+ D C +TL P Y++ + + +R R ++G P+ LP ID + R F V +GG LD++F+ + G+ + +P+ LRG T + GG ++ F +A FL V+VFGG I G + +T H + + G+ RE+ VGG+ L++ G +GC F N +F + G Sbjct: 8 GCTPKNAEELRYMI-DHTTCPRLTLVPATNYSI-----TEQLVIRRRVTLVGRPLGLPIIDAHNTTRAFLVEAGGFLDVRFVEIVK--GKFVEVVPLVLYRLRGPTCYIRRGG-VALFTGCRFSANWRNAALFLGITPPQTNVQVFGGGIVAESGTLRVTDCHVFRPRIGIAFREIQFVGGEFLVLGGNMYLTGCIFVNMAIFASSLG 206
BLAST of NO16G03080 vs. NCBI_GenBank
Match: EWM23493.1 (hypothetical protein Naga_100198g12 [Nannochloropsis gaditana]) HSP 1 Score: 90.5 bits (223), Expect = 3.400e-14 Identity = 64/204 (31.37%), Postives = 103/204 (50.49%), Query Frame = 0 Query: 178 QGGCMPADGMELRRMVEDPNACTIITLRPGKVYNVALEGKADDITVRSRKVIIGNPISLPTIDGTASKRIFHVVSGGSLDLQFLRTYRGSG--------ELIAT------IPVLRGGTALVE---LGGRISAFGVVFTNAPPVGVPPFLVGADLSRAV-----RVFGGQIFNAGGIMTITLSHFWVLQPGVLLRELYVVGGDVL 360 + GC DG+EL +E+ +C+I+ L+PG++Y + E I VR +++GNP LP IDG + R FHV+ GG LDL+F++ + G E+ AT + +RGG+ ++ LGG+ + GV+F + P V + R++ R++GG +F GG + FW L + +G DVL Sbjct: 152 EDGCEVNDGLELTDAIEN-QSCSIVYLKPGQLYELERE-----ILVRREVIVMGNPSVLPMIDGEDAIRSFHVLEGGFLDLRFVQQFASDGIVREPKPYEIFATTSPRNRVWEIRGGSVFIDEGALGGKFT--GVIFIDDPDV---EDAARRSIRRSIDGDVYRIYGGHVFIVGGRVDFVGCLFWDLTLIYTFGNVLYIGQDVL 344
BLAST of NO16G03080 vs. NCBI_GenBank
Match: EWM27664.1 (hypothetical protein Naga_100125g7 [Nannochloropsis gaditana]) HSP 1 Score: 88.6 bits (218), Expect = 1.300e-13 Identity = 62/199 (31.16%), Postives = 95/199 (47.74%), Query Frame = 0 Query: 188 ELRRMVEDPN--ACTIITLRPGKVYNVALEGKADDITVRSRKVIIGNPISLPTIDGTASKRIFHVVSGGSLDLQFLRTYRGSGELIAT-IPVLRGGTALVELGGRISAFGVVFTNAPPVGVPPFLVGADLSRAVRVFGGQIFNAGGIMTITLSHFWVLQPGVLLRELYVVGGDVLMVSGVAVFSGCTFTNSQLFLNGFG 384 + RR++E N AC ++ L G VYN+ + V +IGNP P I+ ++R F V SG + D++ + Y G G+LI I GG + +G R+ AF +FT + P S +FGG I GG+MT+ F+ + PG + +GG VL++SG A + F +Q+F G Sbjct: 182 DTRRLMEAVNSTACDVVVLVAGHVYNLDRM-----MHVYKPTTVIGNPADRPVINAAEAERAFLVHSGATFDVRHILFYEGDGDLIRNEIRTRFGGAIYMSIGTRLFAFDCLFT------IQPVRESFINSAPEFIFGGDILMEGGVMTLVGCSFFAVVPGFINSVSTELGGAVLILSGAATLTLVNFMTTQIFAYNAG 369
BLAST of NO16G03080 vs. NCBI_GenBank
Match: XP_005854372.1 (hypothetical protein NGA_0163600, partial [Nannochloropsis gaditana CCMP526] >EKU21987.1 hypothetical protein NGA_0163600, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 80.9 bits (198), Expect = 2.700e-11 Identity = 56/183 (30.60%), Postives = 83/183 (45.36%), Query Frame = 0 Query: 229 IIGNPISLPTIDGTA---SKRIFHVVSGGSLDLQFLRTYRGSGE---------------------------LIATIPVLRGGTALVELGGRISAF-GVVFTNAPP--VGVPPFLVGADLSRAVRVFGGQIFNAGGIMTITLSHFWVLQPGVLLRELYVVGGDVLMVSGVAVFSGCTFTNSQLF 379 I+G+P+ LP ID + + R F VV GG LDLQ++R G GE + I RGG+ +E G + F GV+F + V + R +GG IF AGG + T HFW + L + + +GGD+LM++G + CTFT++ +F Sbjct: 183 IVGHPVFLPVIDASTLNMAPRAFRVVEGGFLDLQYIRVRAGVGETKERPVSSNQTQAESAFGETSGTQQVGVTGKILETRGGSVAIEQGASGANFEGVIFLSVANSWESVQEAIQATYTGMGGRTYGGHIFIAGGSVKFTNCHFWTTAILLPLTDQFSLGGDILMLAGTLTVTACTFTSTTMF 365
BLAST of NO16G03080 vs. NCBI_GenBank
Match: EWM26075.1 (hypothetical protein Naga_100278g5 [Nannochloropsis gaditana]) HSP 1 Score: 80.9 bits (198), Expect = 2.700e-11 Identity = 56/183 (30.60%), Postives = 83/183 (45.36%), Query Frame = 0 Query: 229 IIGNPISLPTIDGTA---SKRIFHVVSGGSLDLQFLRTYRGSGE---------------------------LIATIPVLRGGTALVELGGRISAF-GVVFTNAPP--VGVPPFLVGADLSRAVRVFGGQIFNAGGIMTITLSHFWVLQPGVLLRELYVVGGDVLMVSGVAVFSGCTFTNSQLF 379 I+G+P+ LP ID + + R F VV GG LDLQ++R G GE + I RGG+ +E G + F GV+F + V + R +GG IF AGG + T HFW + L + + +GGD+LM++G + CTFT++ +F Sbjct: 48 IVGHPVFLPVIDASTLNMAPRAFRVVEGGFLDLQYIRVRAGVGETKERPVSSNQTQAESAFGETSGTQQVGVTGKILETRGGSVAIEQGASGANFEGVIFLSVANSWESVQEAIQATYTGMGGRTYGGHIFIAGGSVKFTNCHFWTTAILLPLTDQFSLGGDILMLAGTLTVTACTFTSTTMF 230
BLAST of NO16G03080 vs. NCBI_GenBank
Match: EWM26475.1 (hypothetical protein Naga_100045g21 [Nannochloropsis gaditana]) HSP 1 Score: 79.7 bits (195), Expect = 5.900e-11 Identity = 54/212 (25.47%), Postives = 104/212 (49.06%), Query Frame = 0 Query: 181 CMPADGMELRRMVEDPNACTIITLRPGKVYNVALEGKADDITVRSRKVIIGNPISLPTIDGTASKRIFHVVSGGSLDLQFLRTYRGSG------------ELIATIPVLRGGTALVELGGRISAF-GVVF----TNAPPVGVPPFLVGADLSRAVRVFGGQIFNAGGIMTITLSHFWVLQPGVLLRELYVVGGDVLMVSGVAVFSGCTFTNS 376 C P + +EL+ VE+ + ++ P + + ++ ++I V ++G+P LPTID R F ++ GG L+LQ++R +G G ++ + + ++GG+ ++E G + F GV+F TN + D++ R++GG ++ G + HFW + + +G D+L+++G +GCTFTN+ Sbjct: 204 CWPRNIVELQIAVEEADCPLVVLTNPNPMAYMLMD--MNEIMVMRHVRVLGHPALLPTIDAMMGMRAFTIMEGGFLELQYVRVRQGMGMYRDRYGLEGRDDISSKVFEIKGGSVMLEEGAEGANFVGVIFLAVMTN-QEMTEQAIQDQIDMT-GWRIYGGHVYVTAGTVRFFNCHFWDSMILMPFTDQVAIGADILVLAGNVFVTGCTFTNT 411
BLAST of NO16G03080 vs. NCBI_GenBank
Match: EWM25323.1 (hypothetical protein Naga_100281g10 [Nannochloropsis gaditana]) HSP 1 Score: 76.6 bits (187), Expect = 5.000e-10 Identity = 51/153 (33.33%), Postives = 77/153 (50.33%), Query Frame = 0 Query: 181 CMPADGMELRRMVEDPNACTIITLRPGKVYNVALEGKADDITVRSRKVIIGNPISLPTIDGTAS-KRIFHVVSGGSLDLQFLRTYRGSGELI-ATIPVLRGGTALVELGGRISAFGVVFTNAPPVGVPPFLVGADLSRA-VRVFGGQIFNAGG 331 C P +G EL+ M E ++C++I L+ G L + V SRK+++G+PI LP I R+F V GGSLD++F+ +R S + + V+ G ALVELGG + +F P F+ + A R+ GG + GG Sbjct: 161 CYPQNGEELKGMTESGSSCSVIILKKGSSDKYTL---PSTVIVTSRKIVLGHPIDLPQIHPDKEVYRLFEVKPGGSLDIRFVSLFRPSPRKVDENLSVIVAGVALVELGGYMRGTACIF-RQPAQTFEAFVKSLETPFARKRIVGGFVLVLGG 309 The following BLAST results are available for this feature:
BLAST of NO16G03080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 15
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G03080 ID=NO16G03080|Name=NO16G03080|organism=Nannochloropsis oceanica|type=gene|length=5988bpback to top protein sequence of NO16G03080.1 >NO16G03080.1-protein ID=NO16G03080.1-protein|Name=NO16G03080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1056bpback to top Synonyms
Publications
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