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Properties
| Property Name | Value |
|---|
| Description | Unknown protein |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr16 | genome | chr16:888047..895153 + |
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR036864 | Zn2-C6_fun-type_DNA-bd_sf |
| IPR001138 | Zn2-C6_fun-type_DNA-bd |
Homology
BLAST of NO16G03020 vs. NCBI_GenBank
Match: EWM23799.1 (hypothetical protein Naga_100408g3 [Nannochloropsis gaditana]) HSP 1 Score: 85.9 bits (211), Expect = 7.900e-13 Identity = 65/241 (26.97%), Postives = 102/241 (42.32%), Query Frame = 0
Query: 372 ERQQLLGEMQRNPFLNELSQRAVTQMMVTALRDLRRKQRLDMHRVVTMLRTCYLILVRRPHSILHAWAELCSSICGLEWHDFFDEAMRLANSHCLEAVIEEAFTSLNTHAQSLISHWHAHGHDVPISYCLSTQGESRIFFNEPYNHRFLPHVAEARN-QQELPVPFYIWSRVIAPEDQALFVTAVTETLF---GLPLGREXXXXXXXXXXXXXXXXGSRRWWPSVLYTRAGVATAFAAVPL 609
ER+ L +++ NP + E++ RA R V +LR L R + + + E+ ++ G++W +E + + E F S +L+ W A G VPI+Y +S +GE R++FNE + + +L + + VP +W RVI PEDQ F TA+T + G P RE R+ VLY+ G A AF+ PL
Sbjct: 52 ERKMSLVQLRDNPLVQEMADRAALXXXXXXXXXXXXXXXXXXXRAVAVLRVGALSFHRTASAQIRQYCEVLGTLIGVDWRTVLEEXXXXXXRR-QDPISEAEFISAQGEVNALVQPWEARG--VPIAYTISVKGEVRVYFNECFVNGYLRDATQVKEFSSPNVVPLLLWRRVIVPEDQLFFFTAMTSCIVSQEGPPGSREVAVLVRCFQYDGAEVLSEVRY--RVLYSTHGFAQAFSIHPL 287
BLAST of NO16G03020 vs. NCBI_GenBank
Match: EWM23804.1 (hypothetical protein Naga_102056g1 [Nannochloropsis gaditana]) HSP 1 Score: 71.2 bits (173), Expect = 2.000e-8 Identity = 32/86 (37.21%), Postives = 56/86 (65.12%), Query Frame = 0
Query: 484 LISHWHAHGHDVPISYCLSTQGESRIFFNEPYNHRFLPH--VAEARNQQELPVPFYIWSRVIAPEDQALFVTAVTETLFGLPLGRE 568
+++ W A G ++P++Y +S +G++ + N PY F+P+ +A+A Q+E VPF+ W+RVIAPE +ALF+ + E ++ G E
Sbjct: 1 MLASWRAMGIEIPMAYSISIKGDNTSYLNTPYLRHFIPNASLAQAVTQEEHVVPFHKWARVIAPEYRALFIEKMVENIYEGSSGAE 86
The following BLAST results are available for this feature:
Relationships
This gene is member of the following syntenic_region feature(s):
The following gene feature(s) are orthologous to this gene:
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G03020 ID=NO16G03020|Name=NO16G03020|organism=Nannochloropsis oceanica|type=gene|length=7107bp
ACAGGCACACAGTATTGTACGCGGCCACTCAACAGTATCACCCGCACACT
CCTTTGCTTTGGCCAGTCGTGGAACAAACGTTCGCGCTTCCGGAATGGAC
TTCGGAAAAGCCGGAGCGGATTGCGAACAGGTCATGAAGCATGCCACTAC
ATCCACCACCAGCAACAGCGACAGAGCAAACCTTGCTCCTAGTCCTGTTT
TGCTCACCGCTGCCTGTCGGGCCTGTCGCTCCATCAAGgtaagcaagctg
gacaatttagggacatctatgccgcatggatagcatcacattcgaattcc
actcctcctctctctcctttcgctttgatttccacccgtttcaagttttt
cctcatcggcgcctggttctacgtcatttctttcgtactggtggtcccgt
caagacaagcttttgaggctagtgctgtcgttcacgctgatagaggacta
atattgccctttccctccaaccccttcctcctttttttcacagATTAAAT
GTGACCGCTCTAGTTGGCCCTGTGAACGgtacgtcatattctacgattat
ttaacggcgtgcacaacagctttttcatgtcttttggagggattggggat
taatgtccccgcgttccctttcgccgcttctggctgccggcctctcccaa
gtattagttaaacaattttgggcatgcggtccaaatatgaagaaggcaga
tttatgccatttcctgaaatttacattttgcacagggcgaagcaaacgcg
ggcatgtgccaggatgggtgatatggcagaacgaacggatagatgttgca
ttactgctcccaacgtcagcgttttgtcttcatcctttctgaggcccttt
tcttccttccttttgaaccgacaaacaatagGTGCACGCGCTTGGAGCTA
GAATGCAAGCCGCAGGAACGTGGACGTGGTCGGCCCAGGGGGAGCGTTAC
TGTCGgtgagacgggcgggcgggaggggcgaaaagggcggaggaaaatga
tgttgatcttgccttcaggaaatatgttcctcttttagcaatagaagcag
atttgacgtaggacgaaaaagggtgacagcgcagtgcttgttacaagctt
attatgtagctgtgtgtggatgtgtgagtagtggctcgaattcgagctga
ggaagaagaagttattgaacaagaaagaggaggaggagaaggaggaggag
gaggaggaggaggaggaggaagaggggcgaagagaagataaaggcgagtg
ctcaataggtcacatacgacacctcaaactcttacagatacacatatttc
ttctgccctgcctccttttttaaaaatcccatccttctcactaccagTGG
ACAGCGAAACCTTCTTGTGCCAGCCGTCCTGGTCCTCGTCGACCACGTCT
CACTTGGGCCCGCGTGGAAGAGGCGATGGAGGAGAAGGACGAGGAAGGGC
AAAAAAGAAAGAAGAAAAAAAGAAGCATTCCTTGCCACGGTTACCTAGGA
GAAACGAGgtaaggggcctgtgaggaacggtgtggagagagcagcaagtc
tggacggatgaaggggatgatcccctcttacccccctccctccctccccc
tttccctctttcccttgaccatgcgatctaaagGGGAAATGCTCCAGCCA
GGATGGGGGCTTTCCTCTTCAGCACTTTCCCGGGAACGGCCTTCACTTGA
ACACAGCAGCAACGGCAGTAACAGGAGCAACAGCAGCAACGGCAGCAGTA
GCAGTAGCAGCAGCAGCAGAAGCTGCAAGAGTAGCAGCAGAAGAAGCATA
CACAAAAGCCGCAGCAGCAGCAAAAACTTCAGCAGCAGCAGCAGCAGCAG
CGGCAGCAGTGGTATCGCGATGTTCAACCCGAGCTCGTGCATCCGATgta
aaccaccccccctccctccctccctccttccctccctccctccctccctc
cctccttctcttccggcattgcgattccctttttttcctcctttatcgca
aagcttcatttcaaacttgaacacctcgtccgttcctccctctcccccat
ccatcccctcccgcactcgtcccgactcttcatgaaagtcaaccactttc
ctccctccttccctccctccctccctctcccagGCCTTGGTTTCTTTTGA
CTATACGAGCATCGCTGAGGGGGGAGAGATTAGAAAACGACAAGGGGGGG
AGGGGGAGGAAGGGACGGAGGAAGGGAGGGAGGAAGGGAGGGAGGAAGGA
TGGGAGAGGGTCAAGAAGATGAAGAGGGAGATGGAGGAAGGGGAGGAGGA
CGGGAATGAGGTGGAGGGTGATGTCAAGGAGGAGCGTGAGGAGGGGGGGA
ATAAGGAAGGGGAGAAGGAGGAGGAAGAGTGTGAGAGAGATTATAAAATC
ATGAGAAATATCACTGATGGGGTGAGCGATTGCAAAGATAATAGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGCTGAAGGGAGGAATT
CAGTTGATGTCGGCGGAAGAGCGGCAGCAGCTGTTGGGTGAGATGCAGCG
CAATCCCTTTCTCAACGAACTGAGTCAGAGGGCAGTGACGCAGgtgacga
atagagaaagggaaggagggagggagggagggagagagcgacagaaggac
agaggaagggaaggacggtgggaggatagagtgacagcctcagcaacttg
tcatcataagtctgatggatccctccctccttccctccctctctccctcc
ctccccccctctctccctcccttcctattacgcgttagATGATGGTCACA
GCCTTGAGGGATCTCCGTCGAAAGCAGCGTCTGGATATGCACCGGGTCGT
CACCATGCTgtacgttgaaagaaataaagagagagagggagagagggagg
gagagagggagggagagagggagggagggagggagggagggaaggaagga
gggagggagggagggcgattctgtgatcaacacgaggctgcaatgtgcga
aggatgggggggggggggggggggggatagaaggtaggtgaggaagagag
aggaggtaagggaaacagaggagggagagaaaaaagataggaagggaggc
aagtcaaggtaatacatgagctggttttatgtcctgacgacactccgatg
cataccattcataactactccctccctccctccctcagACGCACCTGCTA
CCTCATCCTTGTCCGACGCCCGCATTCCATTCTTCATGCTTGGGCCGAGC
TTTGTTCGTCCATCTGCGGCCTCGAGTGGCATGACTTCTTTGATGAGgta
cctcccctccctccctccctccatccctccctctcacaaagccgtctcac
aggatcttgtgacattcctcttcttccctctctccttccctctctccctc
cctttccagGCCATGCGCCTGGCCAATAGCCACTGCTTGGAAGCCGTCAT
TGAGGAAGCCTTCACATgtaagtctgcaccctccctccctccctccctcc
ctccctccctcctttcctccctcccattctccttccatccattacctcac
ccccccgtccaacctcctccccccgccctccctccctccctccttccagC
CCTCAACACCCACGCGCAAAGCCTGATCTCTCACTGGCATGCCCATGGGC
ACGACGTTCCGATCTCTTACTGCCTATCTACCCAGGGCGAAAGCCGCATT
TTCTTCAACGAGgtgtgtatgtagtaggtgtcctactttccctcccttcc
tccctccctccctccctccctctcatctcccttcttgtgtacctcatgac
tccaccttctcctccctcccgccctccctccattcctccctccctccccc
tctctctcaagCCCTACAATCATCGATTCCTACCTCATGTCGCCGAGGCC
AGAAATCAGCAGGAGCTTCCTGTGCCTTTCTATATCTGGTCACGgtaggg
agggcgggagagagagaaggagagaagaaggggtgagggagagaaggaag
gaagaaggagggagggagggagggaggggggaaggaggggaggaggggaa
ggagggagggagggggggaaggaggggaggaggaaggggcggttacggga
aagtattctatcatttttcaacggagttgttatttccgtttggatgttta
gaactggcttgggaggaggggatagacgtagggagggagggagggaggga
gggagggagagggagggaaggaagggagggaggtttactgtcactcacgc
gccttctctccttctctccctccctcccgctgttccaaccgtcagTGTGA
TTGCTCCCGAAGATCAAGCGTTATTCGTAACGGCAGTGACTGAGACTTTA
TTTGGGCTGCCCCTTGGGAGGGAGGGAGGGAGGGAGGGAGGAAGGGGGGA
GGGAGAGGAGGAGGGGGGGGGAGGGAGTCGTCGATGGTGGCCAAGgtacg
tcgagggagggagggagggagggagggagggagggagggaaagagggacg
ggggggagaaattaaaaatgagcaacttcgattgctaagtggatgaatca
tgctttcaagatatatcccttgcatctcctccctccctccctccctccct
ccctcctttcctccctccctccctccctcctttcctctctccctccttcc
ttccttccctccttccctccctccctccctccctccctcagtgcatcctt
gtcgacggcagcgaggcctttttcctccttcattacagTGTGTTGTACAC
CCGTGCCGGAGTGGCGACGGCTTTTGCTGCCGTGCCCCTCCTTCAGCACG
CGGACTACTACGTCGTGCCGCGTCCTTTCCCAGgtagagggggagggagg
gagggagggagggagggagggagggagggggggaggggaggggaggggac
gtatgtttggctcctgcggctggcatggttacccacgctctccctccttt
tctccttcctttttttcctttttttctaccttcctttcctccctccctcc
ctcttcccctccttcaagTACTCAAGACTGCCACTGCTATATCTGTCTCC
TCCTCCACCACCACCTGCTCCTCTTCCTCCTTCACGAAGCATCCGGGTAG
CTTCGCCTTTCCTCCCTCCCTCCCTCCCTCCTTTCCTCCCTCCCTTTCCG
ACCCATTTCGAGGCTTGTCGCGGCGCTCGTCCTCGTCGGGCGAGGTCTCA
GGGGAGGACGAGGGAGAGGAAGGGGAGGAGGGAGGGCGGCACGAGACACC
CTGGAGTGCGCAGTTTCCGCCGCAGgtatggaagggagggagggagggag
ggagggcgataaaaagatattgggaggaagggagggaaggagggagattg
gaagatatgtggaagagaaacgctttgctaagttcatttttggggtggat
ggatgactcatctcgtccaccctcccttcctccctcattccctccctccc
tgcttccctctttccttcttgaaccttttacacctgcacctgcagGTGGT
GGAAGATGATGCGAAGCTGCAGGTGAATGGGTTGCTTCCTTCGCCGGGAG
ACCTGGATCGgtagggagggagggagggagggagggagggagggagggag
ggagggagggagggaaggagggaaggagggaaggagaaaggaagggagag
agggagagagggatgaagggaggaagggttgtaagtatgtattgtcatca
tccactacattagtttacgcgcatgagacctgagcgccctctcgggtcaa
aggggagtctgttacgctctacccatttaccagcctcgttacctcccctc
cctccctccctcccttcctcactccatttctcttccaccgcgtagCAGTT
CCTCGGGCACCGACTGCCTCTCCATCTCCGTGGATGCCGCTTGTCCTTCC
TCCCTTCCCTTCTCGCTCCCTTCCTTCCTCCCTTCCTCCCTCCCTTCCTC
CCTCCCTTCCTCCCTCCCTCCCTCGCCCATCGTTCTGCGTTCGGCTTTGA
GTGGCGAAGGCAGCATCGGGAGCTCCGAATGGCCTGCCGTTCCTCCTCCC
TTAGAGGAGTTGAAGCAAGCAGCGAGGGAGGGAGCATCGTTTGGGGAGGA
GGAAAAAGGATgtgagtacgaaggagggagggagggagggagggagggaa
aggtgtcgtaagtatgatttaggtgctactcggctgaagtcccatcggcc
actgttgctccgttgagtcgtccttatccctcctccctccctacctccct
ctttccccgccgtttttccagCGCAGGATGGCAAGGCAAGCAGTAGTGAC
CGGACCGTCGGCCACACGGCGGATCACAACCCTCAAATgttggtagatta
gagatgcgaaagaggggaggaaggggaaggaggggagggagggagggagg
gagggagggagggagggagggccttgaaaatgaaccctgcaaacatctcc
tacaccctctctctcacagcaccatcgcctcgagcaaacgaaatgccttc
ccgttaaatcgctctcttccgccttcccctccctccatcccaccctccct
ccctccctcagATCTAGCCAGCTTGCGTCCCAAGGCGGCTCCTACATCCT
TCCTTCCTACCTTAGACTTCTTTCTCCTCTGACACATCGCCTCCTCTACC
ACCCTGTCTCGCCCTCCTCCTCATTCCCTCCCGCCCAGCCCTCCTTCTCC
CTCCCTGTAAATTCTGTTCAAATTCCCAGCCGCGTCGCACGGGCGGAGGA
GGGGCGAGGGAGGGGGGGTGGAGGGAGGGAGATGGAGGGGGGAAAGGGCG
AGGGAGAGGCTGAAAGGAGACTCGATGAGAAGAGACGGGAAGGGGAGGAA
GGGAGGGAGGAAGAGAGGGAGGGCGGCACACTACGAGTTATATTTCGACC
GACAGCAGTTGGAAACACAGGCAAACGAGCTCTCGACACTGCAGCAGCAG
GCCGCAGGTGCGACGATAACAAGAATGACGAGGTCAATCACAGAAGGAGG
AGGAGGAAGAGGAGGAGGAGGAGGGAGGGGTGCAGGGAGGAGAGGAAAGT
AGGATAG back to topprotein sequence of NO16G03020.1 >NO16G03020.1-protein ID=NO16G03020.1-protein|Name=NO16G03020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1006bp
MDFGKAGADCEQVMKHATTSTTSNSDRANLAPSPVLLTAACRACRSIKIK
CDRSSWPCERCTRLELECKPQERGRGRPRGSVTVVDSETFLCQPSWSSST
TSHLGPRGRGDGGEGRGRAKKKEEKKKHSLPRLPRRNEGKCSSQDGGFPL
QHFPGNGLHLNTAATAVTGATAATAAVAVAAAAEAARVAAEEAYTKAAAA
AKTSAAAAAAAAAVVSRCSTRARASDALVSFDYTSIAEGGEIRKRQGGEG
EEGTEEGREEGREEGWERVKKMKREMEEGEEDGNEVEGDVKEEREEGGNK
EGEKEEEECERDYKIMRNITDGVSDCKDNRGGGGGGGGGGGGGGGGGGGG
GGGGGGGGGGLKGGIQLMSAEERQQLLGEMQRNPFLNELSQRAVTQMMVT
ALRDLRRKQRLDMHRVVTMLRTCYLILVRRPHSILHAWAELCSSICGLEW
HDFFDEAMRLANSHCLEAVIEEAFTSLNTHAQSLISHWHAHGHDVPISYC
LSTQGESRIFFNEPYNHRFLPHVAEARNQQELPVPFYIWSRVIAPEDQAL
FVTAVTETLFGLPLGREGGREGGRGEGEEEGGGGSRRWWPSVLYTRAGVA
TAFAAVPLLQHADYYVVPRPFPVLKTATAISVSSSTTTCSSSSFTKHPGS
FAFPPSLPPSFPPSLSDPFRGLSRRSSSSGEVSGEDEGEEGEEGGRHETP
WSAQFPPQVVEDDAKLQVNGLLPSPGDLDRSSSGTDCLSISVDAACPSSL
PFSLPSFLPSSLPSSLPSSLPPSPIVLRSALSGEGSIGSSEWPAVPPPLE
ELKQAAREGASFGEEEKGSQDGKASSSDRTVGHTADHNPQISSQLASQGG
SYILPSYLRLLSPLTHRLLYHPVSPSSSFPPAQPSFSLPVNSVQIPSRVA
RAEEGRGRGGGGREMEGGKGEGEAERRLDEKRREGEEGREEEREGGTLRV
IFRPTAVGNTGKRALDTAAAGRRCDDNKNDEVNHRRRRRKRRRRREGCRE
ERKVG* back to topprotein sequence of NO16G03020.2 >NO16G03020.2-protein ID=NO16G03020.2-protein|Name=NO16G03020.2|organism=Nannochloropsis oceanica|type=polypeptide|length=735bp
MKREMEEGEEDGNEVEGDVKEEREEGGNKEGEKEEEECERDYKIMRNITD
GVSDCKDNRGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGLKGGIQLMSAE
ERQQLLGEMQRNPFLNELSQRAVTQMMVTALRDLRRKQRLDMHRVVTMLR
TCYLILVRRPHSILHAWAELCSSICGLEWHDFFDEAMRLANSHCLEAVIE
EAFTSLNTHAQSLISHWHAHGHDVPISYCLSTQGESRIFFNEPYNHRFLP
HVAEARNQQELPVPFYIWSRVIAPEDQALFVTAVTETLFGLPLGREGGRE
GGRGEGEEEGGGGSRRWWPSVLYTRAGVATAFAAVPLLQHADYYVVPRPF
PVLKTATAISVSSSTTTCSSSSFTKHPGSFAFPPSLPPSFPPSLSDPFRG
LSRRSSSSGEVSGEDEGEEGEEGGRHETPWSAQFPPQVVEDDAKLQVNGL
LPSPGDLDRSSSGTDCLSISVDAACPSSLPFSLPSFLPSSLPSSLPSSLP
PSPIVLRSALSGEGSIGSSEWPAVPPPLEELKQAAREGASFGEEEKGSQD
GKASSSDRTVGHTADHNPQISSQLASQGGSYILPSYLRLLSPLTHRLLYH
PVSPSSSFPPAQPSFSLPVNSVQIPSRVARAEEGRGRGGGGREMEGGKGE
GEAERRLDEKRREGEEGREEEREGGTLRVIFRPTAVGNTGKRALDTAAAG
RRCDDNKNDEVNHRRRRRKRRRRREGCREERKVG* back to top
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