NO16G02750, NO16G02750 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO16G02750 vs. NCBI_GenBank
Match: XP_005854601.1 (hypothetical protein NGA_0209800, partial [Nannochloropsis gaditana CCMP526] >EKU21753.1 hypothetical protein NGA_0209800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 238.8 bits (608), Expect = 2.800e-59 Identity = 153/361 (42.38%), Postives = 192/361 (53.19%), Query Frame = 0 Query: 30 FPPSLERKTTTRLLLARLTSCLSSPIPLHYHLHHPRRCTSSFIVSPFNSFLYYRHYPCRRHACFASSIPNASTPTDLPNDPSSSSSTIAIEHDLTQALLQWLKAHAS----SQASPCSPPTPPLLGVRPSSIPNAGRGLWLNPGQSASKGDILTLYPGMMYEIPYDLDAVVSSEDAFSAAPPEFMCGNGYLLRVKVAFKDILCDGRPEGISAQLFRARASREMERQGMRVCTRWLEEEG------XXXXXXXXXXXGGKSMRCLGLGHLINDPKGSECKANVVFKTTRL----------TADSNPPSLPPSLLPHLPTLSASGDNRMERVVVAVXXXXXXXXGRNGKELFVNYGQDPMSVG 371 FPP + T L+ +T+ LSSP +SSF SP C +AS + ++ SS+ E L QAL+ WL+ H S S A+P SPPT LL VRPSSIPNAGRGLWL P Q+ +KGDILTLYPG++YE+P+DL A++ SEDAF+ APP+FM GN +LLRV V+ +D LCDGRP G+SA +FRA + R+ ER G++V WLE EG GG L GHLINDP+GS + NV F+T R+ TLSASG+N ERVV+AV G GKELFV Y QDP +G Sbjct: 23 FPPLRRARGWTPSSLSAVTAALSSP-------------SSSFYPSPL---------------CVHCQAYHASQSANELSNILPISSSAVPERKLDQALVPWLEKHTSLPSFSSATPLSPPT--LLDVRPSSIPNAGRGLWLKPYQNVAKGDILTLYPGLIYELPHDLAALMPSEDAFAFAPPDFMIGNAFLLRVSVSSRDFLCDGRPFGLSAHMFRAISRRQHERLGLQVNDAWLEGEGEGGKENGGGTAKERGAEGGGKRSSLAWGHLINDPQGSGGRPNVAFRTIRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLSASGNNARERVVIAVVAVEAMEGGAEGKELFVQYSQDPTHLG 353
BLAST of NO16G02750 vs. NCBI_GenBank
Match: EWM23845.1 (hypothetical protein Naga_100273g2 [Nannochloropsis gaditana]) HSP 1 Score: 237.7 bits (605), Expect = 6.300e-59 Identity = 156/361 (43.21%), Postives = 193/361 (53.46%), Query Frame = 0 Query: 30 FPPSLERKTTTRLLLARLTSCLSSPIPLHYHLHHPRRCTSSFIVSPFNSFLYYRHYPCRRHACFASSIPNASTPTDLPNDPSSSSSTIAIEHDLTQALLQWLKAHAS----SQASPCSPPTPPLLGVRPSSIPNAGRGLWLNPGQSASKGDILTLYPGMMYEIPYDLDAVVSSEDAFSAAPPEFMCGNGYLLRVKVAFKDILCDGRPEGISAQLFRARASREMERQGMRVCTRWLEEEG------XXXXXXXXXXXGGKSMRCLGLGHLINDPKGSECKANVVFKTTRL----------TADSNPPSLPPSLLPHLPTLSASGDNRMERVVVAVXXXXXXXXGRNGKELFVNYGQDPMSVG 371 FPP + T L+ +T+ LSSP +SSF SP H AS N +L N SSS + E L QAL+ WL+ H S S A+P PPT LL VRPSSIPNAGRGLWL P Q+ +KGDILTLYPG++YE+P+DL A++ SEDAF+ APP+FM GN +LLRV V+ +D LCDGRP G+SA +FRA + R+ ER G++V WLE EG GG L GHLINDP+GS + NV F+T R+ PTLSASG+N ERVV+AV G GKELFV Y Q+P +G Sbjct: 46 FPPLRWARGWTPSSLSAVTAALSSP-------------SSSFYPSPLRVHCQAYH---------ASQSAN-----ELSNILPISSSAVP-ERKLDQALVPWLEKHTSLPSFSSATPLLPPT--LLDVRPSSIPNAGRGLWLKPYQTVAKGDILTLYPGLIYELPHDLAALMPSEDAFAFAPPDFMIGNAFLLRVSVSSRDFLCDGRPFGLSAHMFRAISRRQHERLGLQVNDAWLEGEGEGGKENGKGTAKEKGAEGGGKRSSLAWGHLINDPQGSGGRPNVAFRTIRVXXXXXXXXXXXXXXXXXXXXXXXXXXXPTLSASGNNARERVVIAVVAVEAMEGGAEGKELFVQYSQEPTHLG 376
BLAST of NO16G02750 vs. NCBI_GenBank
Match: PSC76244.1 (hypothetical protein C2E20_0376 [Micractinium conductrix]) HSP 1 Score: 109.0 bits (271), Expect = 3.400e-20 Identity = 102/288 (35.42%), Postives = 137/288 (47.57%), Query Frame = 0 Query: 130 WLKA-HASSQASPCSPPTPPLLGVRPSSIPNAGRGLWLNPGQSASKGDILTLYPGMMYEIPY----DLDAVVSS----EDAFSAAPPEFMCGNGYLLRVKVAFKDILCDGRPEGISAQLFRARASREMERQGMRVCTRWLEE----------------------------------EGXXXXXXXXXXXGGKSMRCLGLGHLINDPKGSECKANVVFKTTRLTADSNPPSLPPSLLPHLPTLSASGDNRME----RVVVAVXXXXXXXXGRNGKELFVNYGQDPMSVG 371 WL A A+ + + L V PS+IP AGRG++L PG +A +GDILTLYPG+ +++ DA+ +S ++ F+ APP FM N Y+L+ + A + L DGRP G+SAQ F A A+ + G+ V WL+E XXXXXXXXXXX +R LGHLIN A+V ++ L AD LPPSLL LPTL A + VVV G EL +YG DP+++G Sbjct: 7 WLAACEAAVRGGSAAAHPAARLAVAPSTIPEAGRGVFLQPGSAARRGDILTLYPGLAHDMQAVQAGIQDAMAASIPAADECFAPAPPAFMAYNQYMLQRRCAGRAFLIDGRPNGLSAQRFAAAAAVD----GLPVNAAWLDEMHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLLRKTALGHLIN----HGTPASVTYELCPLPAD-----LPPSLLRWLPTLEAGDASASPGLRWAVVVTAAAELHVPAGGPPLELLADYGADPLTLG 281
BLAST of NO16G02750 vs. NCBI_GenBank
Match: XP_005851253.1 (hypothetical protein CHLNCDRAFT_49994 [Chlorella variabilis] >EFN59151.1 hypothetical protein CHLNCDRAFT_49994 [Chlorella variabilis]) HSP 1 Score: 92.4 bits (228), Expect = 3.300e-15 Identity = 75/226 (33.19%), Postives = 108/226 (47.79%), Query Frame = 0 Query: 153 RPSSI--PNAGRGLWLNPGQSASKGDILTLYPGMMYEIP--YDLDAVVSSEDAFSAAPPEFMCGNGYLLRVKVAFKDILCDGRPEGISAQLFRARAS--REMERQGMRVCTRWLEEEGXXXXXXXXXXXGGKSMRCLGLGHLINDPKGSECKANVVFKTTRLTADSNPPSLPPSLLPHLPTLSASGDNRMERVVVAVXXXXXXXXGRNGK--ELFVNYGQDPMSVG 371 RPS I P+AG G++L G G ILTLYPG+++++ L V + +DA + APP + N YLL+++ L DG+P G+SAQ F+A A+ + + V WL G +R LGH++N G AN F L P +LPPSL ++P+LS G E V + G EL V+YG +P+S+G Sbjct: 611 RPSGIQHPDAGDGVFLTAG-GCPAGGILTLYPGLVHDMGDFVLLLGVSAPDDACAPAPPAWTLDNHYLLQLRCLNAACLVDGQPGGLSAQRFQAAAASWAAGQPEAALVNASWLALGGQQRAELDGRLGCEALLRQAALGHMLN--HGPAAAANAAFDMCPL-----PAALPPSLQRYVPSLSVGGRGEEEVRWVPLVTARTALGATAGSPVELLVDYGINPLSLG 828
BLAST of NO16G02750 vs. NCBI_GenBank
Match: EWM22152.1 (hypothetical protein Naga_100064g16 [Nannochloropsis gaditana]) HSP 1 Score: 90.9 bits (224), Expect = 9.500e-15 Identity = 84/266 (31.58%), Postives = 113/266 (42.48%), Query Frame = 0 Query: 153 RPSSIPNAGRGLWLNPGQSASKGDILTLYPGMMYEIPYDLDAVVSSED-AFSAAPPEFMCGNGYLLRV--KVAFKDILCDGRPEGISAQLFRARASRE---------------------MERQGMRVCTRWLE------EEGXXXXXXXXXXXGGKSMRC-------------LGLGHLINDPKGSECKANVVFKTTRLTADSNPPSLPPSLLPHLPTLS-ASG-DNRMERVVVAVXXXXXXXXGRNGKELFVNYGQDPMSVGREG 374 RPS++P AG GL+L G+ G+++T +PG++Y IPYDL+A + ++ +FS PP F+ N YLLR V + +L DG P+GISA F A R ER+ V W E G GG+ + LGLGHL+NDP E K N F L P LPP LL +P L A G +R V+V G E++V Y V + G Sbjct: 193 RPSTLPGAGMGLFLVQGR-VHAGEVITCHPGLVYRIPYDLEACMPMDEVSFSPCPPPFLVKNDYLLRFYHPVTNQHLLLDGCPQGISALNFIAANQRRGRPWANMEWLESSPFGCRRRGPEREEGLVEGGWGEGRKDRGRPGGPMQGTSCLGEGGEEVLLPREMDSSKYFTAKLGLGHLVNDPHSPE-KYNAEFHLCEL-----PSDLPPHLLRFIPNLHFAQGIGSRHFCVLVTASKNLEVPQGAPPVEIYVPYASSFTEVCKHG 451
BLAST of NO16G02750 vs. NCBI_GenBank
Match: EWM22151.1 (hypothetical protein Naga_100064g16 [Nannochloropsis gaditana]) HSP 1 Score: 80.1 bits (196), Expect = 1.700e-11 Identity = 43/97 (44.33%), Postives = 62/97 (63.92%), Query Frame = 0 Query: 153 RPSSIPNAGRGLWLNPGQSASKGDILTLYPGMMYEIPYDLDAVVSSED-AFSAAPPEFMCGNGYLLRV--KVAFKDILCDGRPEGISAQLFRARASR 247 RPS++P AG GL+L G+ G+++T +PG++Y IPYDL+A + ++ +FS PP F+ N YLLR V + +L DG P+GISA F A R Sbjct: 193 RPSTLPGAGMGLFLVQGR-VHAGEVITCHPGLVYRIPYDLEACMPMDEVSFSPCPPPFLVKNDYLLRFYHPVTNQHLLLDGCPQGISALNFIAANQR 288
BLAST of NO16G02750 vs. NCBI_GenBank
Match: PRW60176.1 (SET domain-containing 9 [Chlorella sorokiniana]) HSP 1 Score: 77.8 bits (190), Expect = 8.300e-11 Identity = 41/98 (41.84%), Postives = 60/98 (61.22%), Query Frame = 0 Query: 150 LGVRPSSIPNAGRGLWLNPGQSASKGDILTLYPGMMY---EIPYDLDAVVSSEDAFSAAPPEFMCGNGYLLRVKVAFKDILCDGRPEGISAQLFRARA 245 L V PS+IP AGRG+++ G G IL+LYPG++Y ++ A +EDAF+ APP + N YLL ++ + + DGRP G+SA+L+R A Sbjct: 76 LSVGPSTIPGAGRGVFIT-GGCCPAGSILSLYPGLVYDSCDVEEQQAASALAEDAFAPAPPPWTMDNHYLLALRCLGRSFMIDGRPFGLSARLWRRAA 172 The following BLAST results are available for this feature:
BLAST of NO16G02750 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G02750 ID=NO16G02750|Name=NO16G02750|organism=Nannochloropsis oceanica|type=gene|length=1459bpback to top protein sequence of NO16G02750.1 >NO16G02750.1-protein ID=NO16G02750.1-protein|Name=NO16G02750.1|organism=Nannochloropsis oceanica|type=polypeptide|length=391bpback to top Synonyms
Publications
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