NO16G02740, NO16G02740 (gene) Nannochloropsis oceanica

Overview
NameNO16G02740
Unique NameNO16G02740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4537
Alignment locationchr16:784741..791639 -

Link to JBrowse

Properties
Property NameValue
Descriptionsubunit of exocyst complex 8
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:784741..791639 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006904vesicle docking involved in exocytosis
GO:0015031protein transport
Vocabulary: Cellular Component
TermDefinition
GO:0000145exocyst
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR007191Sec8_exocyst
Homology
The following BLAST results are available for this feature:
BLAST of NO16G02740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR034ngnoR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR032ngnoR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G02740.2NO16G02740.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO16G02740.1NO16G02740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|83573gene_6171Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100273g1gene6624Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G02740.2NO16G02740.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO16G02740.1NO16G02740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G02740 ID=NO16G02740|Name=NO16G02740|organism=Nannochloropsis oceanica|type=gene|length=4537bp
CCTCCCTCCCTCCCTCCCTCCCTCCCTTCAGGCGCCAGCACGGACACGGG
TGCGTTTTTGGGCTTCATGGTTGAAGCCGCCCGGCGCCTGAACTGCCTCG
ACGACATGGAGAGgcaaggagggagggagggagggagggagggagggagg
gaggaccatcaaaactagaaaacatctcatccctccctctttccctgtct
ccctccttccctccttccctccttcagGTTCACGCAAGAGAGGATGCGTG
ACGAGGTGCGGGCGCTGGGGTGTACGCAGCTGGCTCTCGTCAAGGCCCGC
CTCCAACAGCAGCGTCTTGCCTCGGCAGGAGAGCGGATGGCCAGCAGCCC
CCGCCGCCGCAGCAGCAGTAGCAGTAGCAGTTGTAGTAGGAGTAGTAGGA
GTAGTTGTAGTGCCAGAGGGAGCAGGGATGGTGGTGTTTGGGGTGGTGGT
GGGAAGGAGGGCGGGACAGGAATCATCAGGGAGGAGGAGGAGGAGGAGGT
GCAGgtgagggagggagggaggaagggaggaagggattggagaaggagct
taattagaagctagctgctgcatagcaagaaagagaatgtgttgaagacc
aatttcccctccctcccttcctccttccttccttccctccctccctccct
ccttccctccctccttccctccctcctttcctccctccctccttccctcc
ctccagCCCCCTCTGGTGGACTTTCTCCGTGTCCTCTACAGAAATTTTAC
CACCGTCGTCCAAAACCACGCCTCGTTCGCACACCTCTTGCACCTCCACC
ACCTACCCGGAGGAAGGGGGGGAGGGAGGGAAGGAGGGGTGCCTCCCTTA
CTGGCGGCGTTGTGGAGGGAGATGCAGGAGTACATCCAGGAGGTGCTTCA
AGCACATCTTTGCTCGGAAGATACCCGGATTTACGTGGGTCCGGGCATGC
AGgtgcggagggaggggagggaggggagggagggaagaagcacaatacat
gcacataaacacacccacccactcattcactcacacaccttcatccacac
acaaacacacacacatttatcgacatatttatatctacctttacttgatg
atagGTGGAGTCTCCTGAGGGCGCGCCGGCGACCACCGCCTTGATCCAAA
AGAACAAgtacgtagcaccccccctccctccgtccatccctccgtccctc
cgtccatccctccttccttctccttctcatattcaaatctttgaccctcc
ctcccttctaaattttactcctccctccctccctccgtccgtccctccgt
ccgtccgtccctccctccctccctcagGCGGCTCCTCCCCTTCCTCGGCA
ACGCCGCCCTCCTCCTCCCCAATTCCCACTCCCTCGCCTCCTCCTCGCTG
GAGCAGATGATCAAGAAGCTTCACCTCGACCCGACCTCAGGCCTGCAAGC
CCTCGGCGAGGAGCTGAGAAGTCGGGgtgaggaggagggaaggaggaaag
gagggagggagggagggaagggtgggggatattgtagagcttactctcgt
cttctcacccctcccgttatcccccttcctccctctctccctccctagGC
ATCAATGTGCCGGGCCTTGCTGCCAGTGTCTCGAGCACCCACAACGCCGG
CTTCTTCCCCCTCTCTCTCGATGACATCGCGCCCTCCCTCCCGCCCTCTT
CCTCCTCCTCTTCCTCTGCCCAGGGAAGGGCCGAGAAGGAGGGATTGAGA
GAGGGAAGGAAGGGGGTGGAGGAAGCGTCGGTGACGGTGGGGCTCTCGGT
GTGCCCTCCGAGCGTATGGAACGTGGTGCCCATATACAGGCCCACCGTGA
AGgtcagggaggagggagggagggagggagggagggagggagggagggag
ggagagatgcttgttcatgcctagtgagagctgcacccaactgatacata
catatagtgacgcggctccctccctccctccctcctctcccccctccctc
agTTTGCGACCCGTATTCAGGCATTGATCGGCGGCAAGGACGAGGACGAG
GAGGAGTGCGAAGGCAAGGAGGAGGAGGAAGACGAGGAGGAGGATGAGGA
TGATGAGGATGATGACGAAAGCGCCTTGAAGAGGGGGCTGGGACTGTATC
TTTCAGCATTTGTGGGAGAGACGTTACTGCCGTTTCTCTCCGGGCAGACC
AACACAGTGCTCCGAAAGATATTGGAGGACAAGgtaaagagaaagggagg
gagggagggcggtaggtaggtaggtcttagtgtatgtcttcttttttgtt
tgtgagcattggcatacctatacgcttccccctctatattgtttggttgt
ccctgtggttaaatgcatcttccttcttaacctcttgattgtcatcatca
atgcatcttccttcttatctcttgattgtcatcattgtagGACGCGTTGC
GCCCCGTGATCACCCACGACGCAGGAGAAGGAGGAGGAGGTAGGGGAGGA
GATGGGGGAGGAAGGTGGATTGGAGGGCGGATGGGAGGGCCGGGCCACGC
CCACACCCACACGATGAAGGAGCCGAATAAAGgtatgaaccccctctctc
cctccctccctccctccctcccttcctctcactcctcctttgttgtttcc
tcccttacccttccttccttcctccctctctcatgtctccctcgctccct
cgctccctcgttgcagGCGCTCGCTCCGTCCTCGAGCTCTGTCGATCTCT
CCATGCTCTCATCACCGCCTTGCCTCTGCACCGGGAGAACGTCTCCAACA
TCCTTCAAGTAGCCCTGGATTGTTATATTAGAAGgtgggaagagaaggag
ggaggggaagagaaatggcgagccctaccactcatcctcgttgatctcag
ccttctaatccctccctccctccctccttccctccctccctccaccggcc
aacagAATCAAGGACGAATTGTCCTCCGCCGTCTCCGGCACCCTAGCCGG
TGACATTATCCTCTCTTCCACCCCTCCCTCCCTCCCTCCCTCCCCCCTGA
CTGCCCTCAAGGAGAAGCACGTGGCCTTCCTCCGAGACGACCCGGCCTTT
GTCCACTTCCGGGCGCACTGGGGCATGAGGGGAGGGAGGGAGGGAGGGAG
GGAAGGGGTGCCAGGGACGGTGGAGAGGGAGAAAGAGGAAGAGGGTGAAA
AGGAGGAGGTGGAGGAGGAGGAGGAGAGGAAACGGTTGGAGGCTGCTTTG
CAGGTGAGTAGACAAAAGAGGGAAAAATGCACCAAGCTCTCTGTCATTTC
CTTTCATAATCCACCCCCCCTCTCTCGCTCCCTCCTTCCCTTCCTTATCC
CTCAGGTACAACCTGAGCTTTGGCAGTTCGATCGATCCCCCTACCCCCTC
TCCCGCTCCTCCCTTACCCTGGGCCAGCGGCGACTCCTCCTCGTTGCCTC
CCTCGCCTATGCCGCCGACTGGCTGGCACATGCCGTCCTGGATTTCAAAC
ATTCAAATTCAAACAGAATGAAACAGAATAAAAACAAGAATCATGCACGA
GATAGAGAGGTTGCCATTGTCGGGCAATATGGAAGAGGAGGAGGACAAGG
AGGAAAAGGAAGAGGGGACGGAGGAGGAGGAGTAAAAGGAAGGAGGGAGG
GAGGGAGGGAGGGAGGGCATTGGGTGGATACTGTGGTGGGGGAATTAAGA
GCATTCTCCGAACAGTGTGTGCTCTTTCTGAGGCTCGATGTAGACTTCAC
CTGCTTCTTCCACCTCCAGCAAATTTCTTCCTCCCTCTCTTCCTCCCTCC
CTTCCTCCTCCTCCACCACAACTCAAACGGCCTCCAGCTCCCTCCCCTCC
TTCAAGCCTGCTGTTCAAAGCCCAACTACCACTTCTCCCTCTCGCCCTCT
CTCCTCCTCAGCTCCTCCATCCTCCGGGAGCGCGGAGATCTTTCTGGCCC
CCCTCACTCGCTTCCTCCTCTCCCTTGAGGACAGCGTCGTCAGCGTATCT
CTCCCACCCTACTTTGCCATCGCCCTCTCCCACGCCCCCTTCCTCCTCCC
CCGCCTCCTCTCCCACGTGCTGCGCTTCCTCCCTCCCGCCCTCTCCTCCG
TAGCGCTGGAAAAACTGACGAGGGCGTTCCTCGCCTTGCAGCACACGGTC
TCTCTTTTGTTGGACGGGGTAGGGAGGGAGTGGGGGAAGAGGGTGGGGCT
GACCCACACAAGGGCAGAGAAAGAGTTTCAGAGGCTGAGAATGATGCTGT
CAGTATTGGAATTAAACGCGGAGGAGTACAAATTGTTTTTGAATCGAAAT
AAACATAATGCTCTGGTCATTGGCGGATGTAAGAATGGGGTGGATTTTAC
GAGGGAGGAGTACCGGGCGCTGTGGATAGTGGGACCGGGGGGATGGGAGG
AGGGGACGAGGGAGGAAATGCTGGCCAAGTTTCAGGCGATGTGGTTGGAG
TAATGGGGGGAGAATGCATGCGGCTCTGGGAAAGAAAGAGGATGAAGAGC
GAAAGGAAGAAATGGATGAAGAAGAGGACACGGCCTG
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protein sequence of NO16G02740.2

>NO16G02740.2-protein ID=NO16G02740.2-protein|Name=NO16G02740.2|organism=Nannochloropsis oceanica|type=polypeptide|length=1281bp
MDNNPPKLPLGTAPNATLNSSNSNSVAMQQQRAAEALAALEKQVTERVDK
DFFTEEVLFRPLVHVIDALGSSDGDVTNVSLERLKGQFELTNMAMERFVD
ENYTYLNGNVEAMGQILRKFNETFRDVKGLRQQVLECKSALLEGLKEQSI
RQMWVRKREHDFVLSMLDKLDKLKETPAVFDDLIANKCYLAAVTRLDEAI
SAMFSPELLQVAALVSVRNEVLQRKEVFMELVMDDLLSVLYLRIGRGGGR
GGGKGGGVGGGLKGAGKGKGGGGGGGGSIRLPKKLELTEEEERVVMEEGA
STDTGAFLGFMVEAARRLNCLDDMERFTQERMRDEVRALGCTQLALVKAR
LQQQRLASAGERMASSPRRRSSSSSSSCSRSSRSSCSARGSRDGGVWGGG
GKEGGTGIIREEEEEEVQPPLVDFLRVLYRNFTTVVQNHASFAHLLHLHH
LPGGRGGGREGGVPPLLAALWREMQEYIQEVLQAHLCSEDTRIYVGPGMQ
VESPEGAPATTALIQKNKRLLPFLGNAALLLPNSHSLASSSLEQMIKKLH
LDPTSGLQALGEELRSRGINVPGLAASVSSTHNAGFFPLSLDDIAPSLPP
SSSSSSSAQGRAEKEGLREGRKGVEEASVTVGLSVCPPSVWNVVPIYRPT
VKFATRIQALIGGKDEDEEECEGKEEEEDEEEDEDDEDDDESALKRGLGL
YLSAFVGETLLPFLSGQTNTVLRKILEDKDALRPVITHDAGEGGGGRGGD
GGGRWIGGRMGGPGHAHTHTMKEPNKGARSVLELCRSLHALITALPLHRE
NVSNILQVALDCYIRRIKDELSSAVSGTLAGDIILSSTPPSLPPSPLTAL
KEKHVAFLRDDPAFVHFRAHWGMRGGREGGREGVPGTVEREKEEEGEKEE
VEEEEERKRLEAALQVQPELWQFDRSPYPLSRSSLTLGQRRLLLVASLAY
AADWLAHAVLDFKHSNSNRMKQNKNKNHARDREVAIVGQYGRGGGQGGKG
RGDGGGGVKGRREGGREGGHWVDTVVGELRAFSEQCVLFLRLDVDFTCFF
HLQQISSSLSSSLPSSSSTTTQTASSSLPSFKPAVQSPTTTSPSRPLSSS
APPSSGSAEIFLAPLTRFLLSLEDSVVSVSLPPYFAIALSHAPFLLPRLL
SHVLRFLPPALSSVALEKLTRAFLALQHTVSLLLDGVGREWGKRVGLTHT
RAEKEFQRLRMMLSVLELNAEEYKLFLNRNKHNALVIGGCKNGVDFTREE
YRALWIVGPGGWEEGTREEMLAKFQAMWLE*
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protein sequence of NO16G02740.1

>NO16G02740.1-protein ID=NO16G02740.1-protein|Name=NO16G02740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1005bp
MVEAARRLNCLDDMERFTQERMRDEVRALGCTQLALVKARLQQQRLASAG
ERMASSPRRRSSSSSSSCSRSSRSSCSARGSRDGGVWGGGGKEGGTGIIR
EEEEEEVQPPLVDFLRVLYRNFTTVVQNHASFAHLLHLHHLPGGRGGGRE
GGVPPLLAALWREMQEYIQEVLQAHLCSEDTRIYVGPGMQVESPEGAPAT
TALIQKNKRLLPFLGNAALLLPNSHSLASSSLEQMIKKLHLDPTSGLQAL
GEELRSRGINVPGLAASVSSTHNAGFFPLSLDDIAPSLPPSSSSSSSAQG
RAEKEGLREGRKGVEEASVTVGLSVCPPSVWNVVPIYRPTVKFATRIQAL
IGGKDEDEEECEGKEEEEDEEEDEDDEDDDESALKRGLGLYLSAFVGETL
LPFLSGQTNTVLRKILEDKDALRPVITHDAGEGGGGRGGDGGGRWIGGRM
GGPGHAHTHTMKEPNKGARSVLELCRSLHALITALPLHRENVSNILQVAL
DCYIRRIKDELSSAVSGTLAGDIILSSTPPSLPPSPLTALKEKHVAFLRD
DPAFVHFRAHWGMRGGREGGREGVPGTVEREKEEEGEKEEVEEEEERKRL
EAALQVSRQKREKCTKLSVISFHNPPPLSRSLLPFLIPQVQPELWQFDRS
PYPLSRSSLTLGQRRLLLVASLAYAADWLAHAVLDFKHSNSNRMKQNKNK
NHARDREVAIVGQYGRGGGQGGKGRGDGGGGVKGRREGGREGGHWVDTVV
GELRAFSEQCVLFLRLDVDFTCFFHLQQISSSLSSSLPSSSSTTTQTASS
SLPSFKPAVQSPTTTSPSRPLSSSAPPSSGSAEIFLAPLTRFLLSLEDSV
VSVSLPPYFAIALSHAPFLLPRLLSHVLRFLPPALSSVALEKLTRAFLAL
QHTVSLLLDGVGREWGKRVGLTHTRAEKEFQRLRMMLSVLELNAEEYKLF
LNRNKHNALVIGGCKNGVDFTREEYRALWIVGPGGWEEGTREEMLAKFQA
MWLE*
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Synonyms
Publications