NO16G02690, NO16G02690 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G02690 vs. NCBI_GenBank
Match: XP_005854604.1 (extrinsic protein in photosystem II [Nannochloropsis gaditana CCMP526] >EKU21756.1 extrinsic protein in photosystem II [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 385.2 bits (988), Expect = 1.400e-103 Identity = 198/222 (89.19%), Postives = 212/222 (95.50%), Query Frame = 0
Query: 1 MRTISFLALATPALAFMTPMPATERNVMRMSAEQPKSPLTVSNFVKGFATASMFFNFATMPLTSMPEAAMAKAGEGPKQSVFGLGGDAASSPFVEDTPTYSPYSPYGTGENALFKPLNDEDVKFYTAKVTESKKRVDKIAKYLEKKQWEEVRTELTRQMYDLRRAGGKLAENKQSPEASKALKSLFQDIEDLTVASRRKQIDLSQDAYSRAQADFDAFLKAI 223
MRTISFLALATPALAFMTPMP TERNVMRM+AE+ SPL++ N VKGFATASMFFNFATMPLTSMPE+A+AK+GEGPKQSVFGLGGDAASSPFV+D PTYSPYSPYGTGENALFKPLN +DVK YT+KVTESKKRVDKIAKYLEKKQWEEVRTELTRQMYDLRR+G KLAENKQSPEASKALKSLFQDIEDLTVASRRKQ+D+SQ AYSRAQADFDAFLKA+
Sbjct: 1 MRTISFLALATPALAFMTPMPVTERNVMRMTAEKTSSPLSLGNVVKGFATASMFFNFATMPLTSMPESALAKSGEGPKQSVFGLGGDAASSPFVQDVPTYSPYSPYGTGENALFKPLNADDVKLYTSKVTESKKRVDKIAKYLEKKQWEEVRTELTRQMYDLRRSGQKLAENKQSPEASKALKSLFQDIEDLTVASRRKQVDVSQAAYSRAQADFDAFLKAL 222
BLAST of NO16G02690 vs. NCBI_GenBank
Match: EWM23838.1 (extrinsic protein in photosystem ii [Nannochloropsis gaditana]) HSP 1 Score: 338.2 bits (866), Expect = 1.900e-89 Identity = 172/195 (88.21%), Postives = 186/195 (95.38%), Query Frame = 0
Query: 28 MRMSAEQPKSPLTVSNFVKGFATASMFFNFATMPLTSMPEAAMAKAGEGPKQSVFGLGGDAASSPFVEDTPTYSPYSPYGTGENALFKPLNDEDVKFYTAKVTESKKRVDKIAKYLEKKQWEEVRTELTRQMYDLRRAGGKLAENKQSPEASKALKSLFQDIEDLTVASRRKQIDLSQDAYSRAQADFDAFLKAI 223
MRM+AE+ SPL++ N VKGFATASMFFNFATMPLTSMPE+A+AK+GEGPKQSVFGLGGDAASSPFV+D PTYSPYSPYGTGENALFKPLN +DVK YT+KVTESKKRVDKIAKYLEKKQWEEVRTELTRQMYDLRR+G KLAENKQSPEASKALKSLFQDIEDLTVASRRKQ+D+SQ AYSRAQADFDAFLKA+
Sbjct: 1 MRMTAEKTSSPLSLGNVVKGFATASMFFNFATMPLTSMPESALAKSGEGPKQSVFGLGGDAASSPFVQDVPTYSPYSPYGTGENALFKPLNADDVKLYTSKVTESKKRVDKIAKYLEKKQWEEVRTELTRQMYDLRRSGQKLAENKQSPEASKALKSLFQDIEDLTVASRRKQVDVSQAAYSRAQADFDAFLKAL 195
BLAST of NO16G02690 vs. NCBI_GenBank
Match: CEM21093.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 121.7 bits (304), Expect = 2.900e-24 Identity = 77/203 (37.93%), Postives = 113/203 (55.67%), Query Frame = 0
Query: 26 NVMRMSAEQPKSPLTVSNFVKGFATASMFFNFATMPLTSMPEAAMAKAGEGPKQSVFGLGGDA------ASSPFVEDTPTYSPYSPYGTGENALFKPLNDEDVKFYTAKVTESKKRVDKIAKYLEKKQWEEVRTELTRQMYDLRRAGGKLAENKQSPEASKALKSLFQDIEDLTVASRRKQIDLSQDAYSRAQADFDAFLKAI 223
+ ++M+A + + A AS+ FA P AA AK G+ PK S FG GG A A+ ++ P YSPYS YGTGE+ ++ P + ++V KV ES R+ K+ YL+++ WEEVR EL+RQ YDLR LA +P+ASKA K ++D++ L+VA+RRK+ D + Y A D +F+K +
Sbjct: 36 SALQMTANEDEVLGRRDAMTSSLAAASLLSLFA-------PLAASAKTGDAPKASYFGFGGGASTLSEGAAYGSDQEAPLYSPYSVYGTGEDRVWVPNSKQEVGRKVKKVEESAGRIAKVKDYLDQQLWEEVRMELSRQTYDLRENMNSLASVSGNPDASKAAKKFYRDLDKLSVAARRKEQDAALGFYKDAVNDLKSFIKVV 231
BLAST of NO16G02690 vs. NCBI_GenBank
Match: CBN75463.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 91.7 bits (226), Expect = 3.200e-15 Identity = 63/163 (38.65%), Postives = 92/163 (56.44%), Query Frame = 0
Query: 69 AMAKAGEGPKQSVFG-LGGD----AASSPFVEDTPTYSPYSPYGTGENALFKPLNDEDVKFYTAK----VTESKKRVDKIAKYLEKKQWEEVRTELTRQMYDLRRAGGKLAENKQSPEASKALKSLFQDIEDLTVASRRKQIDLSQDAYSRAQADFDAFLKAI 223
A+AKAG G KQ+ FG +G D S + ++ TYSPYSPY G++AL+K D F T + +S+KR+ + ++E K+WEE+R+ LT + Y LR A LA +K P+A+ K ++DIE LTV +R+K AY+ AQ +L I
Sbjct: 56 ALAKAGTGAKQNWFGVIGADPELGGGMSNYFAESDTYSPYSPYSKGDDALYK---SSDQAFMTKVKIDILKDSQKRLQTVPGFIEGKKWEEIRSLLTAKAYSLRDAMNTLAADK--PQAAGVAKVFYRDIEQLTVYARQKNGPACTKAYNDAQEHLTKYLSLI 213
BLAST of NO16G02690 vs. NCBI_GenBank
Match: GAX21201.1 (hypothetical protein FisN_26Lh159 [Fistulifera solaris] >GAX18857.1 hypothetical protein FisN_26Hh159 [Fistulifera solaris]) HSP 1 Score: 89.7 bits (221), Expect = 1.200e-14 Identity = 63/165 (38.18%), Postives = 88/165 (53.33%), Query Frame = 0
Query: 65 MPEAAMAKAGEGPKQSVFGLGGDAASSP------FVEDTPTYSPYSPYG-TGENALFKPLNDEDVKFYTAKVTESKKRVDKIAKYLEKKQWEEVRTELTRQMYDLRRAGGKLAENKQSPEASKALKSLFQDIEDLTVASRRKQIDLSQDAYSRAQADFDAFLKAI 223
+P AA A GE P+ SVFGL GD +S + + YSPYS YG G+ +LF P + A + E+KKR+DK+ K++EKK W EV TEL R M + R A LA Q+PE K + F+ IE + +RRK + + + A AF+ +I
Sbjct: 38 LPAAANAAVGESPRFSVFGLIGDGSSYSEGAAYGTDQSSKLYSPYSVYGEAGDGSLFNPADPSIAGKKKAVLAETKKRLDKLPKFIEKKAWFEVTTELDRYMGETRAAVRYLA---QTPEQKKKATAFFKAIESTDINARRKNQEACAASQKESVAALAAFVSSI 199
BLAST of NO16G02690 vs. NCBI_GenBank
Match: XP_002286571.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96212.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 85.1 bits (209), Expect = 3.000e-13 Identity = 60/146 (41.10%), Postives = 83/146 (56.85%), Query Frame = 0
Query: 65 MPEAAMAKAGEGPKQSVFGLGGDAAS----SPFVED--TPTYSPYSPYGT--GENALFKPLNDEDVKFYTAKVTESKKRVDKIAKYLEKKQWEEVRTELTRQMYDLRRAGGKLAENKQSPEASKALKSLFQDIEDLTVASRRKQID 203
+P AA A AGE P+ SVFG+ GD S + + D TYSPYS YG ++ALF+ N ++ + ES+KR+ + Y+EKKQW V+ ELTR MY+ R A LA Q+PE K K+ FQ IE+ ++ + K D
Sbjct: 49 LPAAANAAAGESPRFSVFGVIGDGTSYSEGAAYGSDQSAETYSPYSVYGKVGSKDALFEAGNAGEIARKKGYIVESQKRLKNLPGYVEKKQWFNVKDELTRYMYETRGAVRGLA---QTPEQKKLAKAFFQAIEEASLQATLKNGD 191
BLAST of NO16G02690 vs. NCBI_GenBank
Match: XP_002180307.1 (oxygen-evolving enhancer protein 3 [Phaeodactylum tricornutum CCAP 1055/1] >EEC48498.1 oxygen-evolving enhancer protein 3 [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 84.0 bits (206), Expect = 6.600e-13 Identity = 62/166 (37.35%), Postives = 91/166 (54.82%), Query Frame = 0
Query: 65 MPEAAMAKAGEGPKQSVFGLGGDAAS----SPFVED--TPTYSPYSPYGTGEN--ALFKPLNDEDVKFYTAKVTESKKRVDKIAKYLEKKQWEEVRTELTRQMYDLRRAGGKLAENKQSPEASKALKSLFQDIEDLTVASRRKQIDLSQDAYSRAQADFDAFLKAI 223
+P AA A GE P+ SVFGL GD S + + D + YSPYS YG N +L+K N E + A + E++KR+ K+ Y+EKK+W EV TEL+R MY+ R A L +SPE K + F+ IE +++R+K + A + + DAF ++
Sbjct: 38 LPVAANAAVGESPRFSVFGLIGDGTSYSEGAAYGTDQASKLYSPYSVYGEVGNPDSLYKDTNPEYLARKKAILAETRKRLQKLPAYIEKKKWFEVTTELSRFMYETRGAIDFLG---KSPEQKKKAVAFFKAIEKTNLSARQKDQAAAASAAADTISTLDAFTSSL 200
BLAST of NO16G02690 vs. NCBI_GenBank
Match: XP_009040815.1 (hypothetical protein AURANDRAFT_72519 [Aureococcus anophagefferens] >EGB04428.1 hypothetical protein AURANDRAFT_72519 [Aureococcus anophagefferens]) HSP 1 Score: 82.0 bits (201), Expect = 2.500e-12 Identity = 54/145 (37.24%), Postives = 75/145 (51.72%), Query Frame = 0
Query: 73 AGEGPKQSVFGLGG------DAASSPFVEDTPTYSPYSPYGT--GENALFKPLNDEDVKFYTAKVTESKKRVDKIAKYLEKKQWEEVRTELTRQMYDLRRAGGKLAENKQSPEASKALKSLFQDIEDLTVASRRKQIDLSQDAYS 210
AGE PK S FG+GG + A + YSPYS YG A +S KRV K +Y+EKK WE+VR+EL RQ+Y++R LA PEA+ A K +QD+E++ + S+RK+ + DAY+
Sbjct: 48 AGESPKFSFFGIGGNGGTYSEGAMYGSDQKDAVYSPYSVYGKLGDXXXXXXXXXXXXXXXXXAMFADSSKRVAKTKQYIEKKSWEDVRSELERQVYNMRGTMNYLAAASGKPEATAAAKKFYQDMEEVNLLSKRKKQAAALDAYA 192
BLAST of NO16G02690 vs. NCBI_GenBank
Match: EJK70163.1 (hypothetical protein THAOC_08500 [Thalassiosira oceanica]) HSP 1 Score: 79.3 bits (194), Expect = 1.600e-11 Identity = 58/149 (38.93%), Postives = 83/149 (55.70%), Query Frame = 0
Query: 74 GEGPKQSVFGLGGDAAS----SPFVED--TPTYSPYSPYGT--GENALFKPLNDEDVKFYTAKVTESKKRVDKIAKYLEKKQWEEVRTELTRQMYDLRRAGGKLAENKQSPEASKALKSLFQDIEDLTVASRRKQIDLSQDAYSRAQAD 215
GE P+ SVFG+ GD S + + D + YSPYS YG +AL+ N +V+ + ES+KR+ K+ Y+E+K+W V+ ELTR MY+ R A LAE +PE K KS FQ IE+ ++ + K +QD + A AD
Sbjct: 60 GESPRFSVFGVIGDGTSYSEGAAYGSDQSSAVYSPYSVYGNVGSSDALYSANNAGEVERKKGFIAESQKRLSKLPAYVERKEWFNVKDELTRYMYETRGAVRGLAE---TPEQKKIAKSFFQAIEEASLQATLK----NQDKCAAASAD 201
BLAST of NO16G02690 vs. NCBI_GenBank
Match: BAG85211.1 (extrinsic protein in photosystem II [Chaetoceros gracilis]) HSP 1 Score: 75.9 bits (185), Expect = 1.800e-10 Identity = 57/152 (37.50%), Postives = 82/152 (53.95%), Query Frame = 0
Query: 74 GEGPKQSVFGLGGDAAS----SPFVED--TPTYSPYSPYG-TGENALFKPLNDEDVKFYTAKVTESKKRVDKIAKYLEKKQWEEVRTELTRQMYDLRRAGGKLAENKQSPEASKALKSLFQDIEDLTVASRRKQIDLSQDAYSRAQADFDAF 219
GE P+ SVFGL GD S + + D YSPYS Y GE +L+KP N E + A + E+K R+ KI Y++KK+W V+ ELTR MY+ R A L+ + E ++ F+ +ED A+ K+ D + + +A A DAF
Sbjct: 59 GESPRFSVFGLVGDGTSYSEGAAYGTDQADKLYSPYSVYSPEGEKSLYKPDNAEYLARKKAVLAETKNRLQKIPAYVDKKEWFNVKDELTRYMYETRGAVRSLSSSVTQKEKAEV---FFRALEDTYGAATLKKGDAVKASNDKAIAALDAF 207 The following BLAST results are available for this feature:
BLAST of NO16G02690 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 14
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G02690 ID=NO16G02690|Name=NO16G02690|organism=Nannochloropsis oceanica|type=gene|length=1318bpback to top protein sequence of NO16G02690.1 >NO16G02690.1-protein ID=NO16G02690.1-protein|Name=NO16G02690.1|organism=Nannochloropsis oceanica|type=polypeptide|length=223bpback to top Synonyms
Publications
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