NO16G02600, NO16G02600 (gene) Nannochloropsis oceanica

Overview
NameNO16G02600
Unique NameNO16G02600
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1624
Alignment locationchr16:750716..752339 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:750716..752339 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO16G02600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL151nonsL151Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR034ngnoR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR032ngnoR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G02600.1NO16G02600.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G02600.1NO16G02600.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G02600 ID=NO16G02600|Name=NO16G02600|organism=Nannochloropsis oceanica|type=gene|length=1624bp
GGGGGGGGGGGGGGTTTGAACGTGGAGAAGATGGCAAGGATGACAGGATG
AGGATAAGCACGGGCCCTGTCGTTGAAAGGTGGAGTGGAGGAAGGGAATG
CAATGAGAGGACGGAGACACGCGGGTGCAGCGCGGAGGGAGAAGAGAGGG
AGGAGGTTTCAATGTCGGGGACGCTTGTTGAGGCCCAAAGCAGGAATACA
ATGGTATGGATGCGAGCACGTGGTTTCTCTGTGATAGCAGGGCGTGTATA
GGTCGTGGTGGTAGATGGGTAGCTGTGAATTCACAGAGAACCCTCACGGG
AACCACGCCTGGAAATTATGGGTGATGTACTCGCTTTCACGACAGCAAAT
TTATCACCCTCGACATTTCGCCTCCTTTCTATGCTGCTAACTTGCACATT
AACTCATGACAGGCCGCATAGCCACACGCCATATCGATCGATATCGCTAC
ATTGACGCCCAGGAGTAGCTGGTCCTGTACTGACGCCAAAGCCTGTAGGA
CCAGCCCACCCAGCAAACATGGAACCCAAGACCCAAGgtaactttataca
ttcctgtacgatgcccaggctcctttctcaacgacagattttgcttctac
tcacttgtgtgtgtattcgcatagagctttggagtatatacatctctcgg
ccgccccatcctcgatcccgcgccctccctcctatctccctctctttccg
tggcacgtacccaaaacaaccacatcacccacatggacagACGCCAGGAA
GGAAGACTTGCTAATGCAGCACATCCTCTCCTACTCGACTTCCTCTTCCA
CCTCCTTGCCATCCTCCTCTCCTTCTACTGCGGCTCCTTCGTCCGCGGCT
GCAACCAGGACCACCACAAGCACCACAGGCAGCAGCTGCACCACCACCAC
CACCAGGACTCCGACAAACGCCTCAGACTTAGCAGCCACAACATCAGCAG
TATCGCCGGTGATGAATAAATTGAAGCGAAAAATGGCGGAGTTTGTCGTA
GGAGGAGCAATGGGTGCTATGACTGGTTTGGTGCTCCAGGGGAGGAAGTT
GGCAAGGAAAAAAGGAGGAGGAAGGGATGAGGGGGGGATGGAAGAAGCAA
AGGAGCAGGAGGGCGAGCAAGAGCTGACGGGAAGATAAGTGGGAGAAAGT
AAGAAGTATGTGTACATGTGTGATGGAGAACAAGAGCGCGTGCGTGTGTG
CCAAAAAAGAGAAAAGTTAATGCCTTTCACGCACAATATTTACACAGGAA
AAGAACATTTTTCCATTTTTCGTATGCCGAACGGACCGTACTAACACAGA
AAAAATGTAAAGAAGATTCGAAAGATAAAAGGCTCCTTTTTTCCGAAACT
AGTGAAAATATAGATAGCCATGGTGCCTGATTTACTCCAAAGGATTCTCT
TGCCTTGCCCTCGAATCCTCACCATTACCCGAGATCTGAAGCCCTGATGA
CCTGCATTAGACTTGGGAAGTACACCATCATCTCCAATGGGCCTAGGACT
GATACTTCAACGATATTCAGCGCCCATGCTTTGCGGTCGTTGGGGGGGGG
TAATAGGCTGAAGCCTGGCGTCATCCCCAAGAAAAATCTTACCGCGAATC
CCGAAAAATCAAGGGTCCTTCGAA
back to top

protein sequence of NO16G02600.1

>NO16G02600.1-protein ID=NO16G02600.1-protein|Name=NO16G02600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=139bp
MEPKTQDARKEDLLMQHILSYSTSSSTSLPSSSPSTAAPSSAAATRTTTS
TTGSSCTTTTTRTPTNASDLAATTSAVSPVMNKLKRKMAEFVVGGAMGAM
TGLVLQGRKLARKKGGGRDEGGMEEAKEQEGEQELTGR*
back to top
Synonyms
Publications