NO16G02570, NO16G02570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G02570 vs. NCBI_GenBank
Match: EWM23855.1 (Autophagy-related protein 13, partial [Nannochloropsis gaditana]) HSP 1 Score: 315.5 bits (807), Expect = 8.300e-82 Identity = 202/370 (54.59%), Postives = 238/370 (64.32%), Query Frame = 0 Query: 6 LSGTGESIPQDWSFTIFEALQKTAEIILRARTSHLD-GEEETFTPTLPPQRSXXXXXXXXXXXXXXXXXXXXXXXXXXLNLEVEEVPLVRQRLLAWKDNLHTPLLLDLAFEEPPPLPLAGE-----ESGHEGGRRDLLERWYIVFEPLTSAVSSPFGSAGGKMVEGGGFAMQAQVKRAQKRLSVLLRTLYAFLRLAPAHGVVKKLEEVSSCAEGIGGGGAGIAPSLHAGLLNTLRGDMDALLA---SGKERGAEDGGTFEAYRFADVVTPYGVFRVSVAYRKDACDFERASXXXXXXXXXXXXXXXXXXTGLMMQPTRIFTDYVV-----GREGGRARHTTIAPQRREGAYPPQASESGLTHALRDYAAE 362 +SGT ESIPQ+W+FT+FEA+QK AEIILRART L G E +T TLPP LNLEVEEV VR+ L AWK++LHTPL+LDL F+ PP PLAGE E+ E G +DLLERWYIVFEPLTS+VSSPF +GG+ VEGGGFA+QAQVKRAQKRLSVLLRTLY FLRL P+ VVK+L E G G A + P++HAGL NTLR DMD LLA G+E GAE GG FE++RF +V TP+GVFR++VAYR+ FER +XXXXXXXXX +Q T I+ +YV GREG R T A P ++ESGL HALRDYAAE Sbjct: 1 MSGTNESIPQEWAFTMFEAMQKAAEIILRARTKDLKAGPERAYTATLPPH-------GHQSGSSNHGNVSSSSSRRFRLNLEVEEVSTVRRGLAAWKESLHTPLVLDLIFQGPPSPPLAGEREQVAETTGEEGSQDLLERWYIVFEPLTSSVSSPFRGSGGRQVEGGGFALQAQVKRAQKRLSVLLRTLYGFLRLMPSQEVVKQLAET-----GPGEERAFVFPAIHAGLANTLRQDMDTLLAGPEEGREGGAE-GGVFESHRFPEVTTPFGVFRLNVAYRRSVSVFERVAXXXXXXXXXCQAENG------SVQSTAIYPNYVAPGEEEGREGWREGGATRA---------PPSTESGLAHALRDYAAE 342
BLAST of NO16G02570 vs. NCBI_GenBank
Match: ETI42929.1 (hypothetical protein F443_12023, partial [Phytophthora parasitica P1569] >ETL36344.1 hypothetical protein L916_11661, partial [Phytophthora parasitica] >ETO71563.1 hypothetical protein F444_12118, partial [Phytophthora parasitica P1976]) HSP 1 Score: 77.0 bits (188), Expect = 4.900e-10 Identity = 58/199 (29.15%), Postives = 92/199 (46.23%), Query Frame = 0 Query: 84 NLEVEEVPLVRQRLLAWKDNLHTPLLLDLAFEEPPPLPLAGEESGHEGGRRDLLERWYIVFEPLTSAVSSPFGSAGGKMVEGGGFAMQAQVKRAQKRLSVLLRTLYAFLRLAPAHGVVKKLEEVSSCAEGIGGGGAGIAPSLHAGLLNTLRGDMDALLASGKERGAEDGGTFEAYRFADVVTPYGVFRVSVAYRKDACD 283 NL++EEV VR + WK+++ PL +D+ ++ G + LLERW + F + S+ GS + Q+K KR+SVLLR L++F+R PAH + + PS+ + L+T DA A +R A +G Y F ++TP+G+ +V+ YR+D CD Sbjct: 121 NLDIEEVQAVRDSMAPWKEDVRLPLAVDIFWD--------------AGSHKVLLERWSVTFAADGESSSAHLGSTQDVI---------QQLKEVCKRISVLLRALFSFMRQLPAHRLFTQ-----------------SYPSMLSYTLHTAPAS-DATRAFEAQRVATNG-----YSFVPIMTPFGMLKVAAVYRRD-CD 272
BLAST of NO16G02570 vs. NCBI_GenBank
Match: ETI42930.1 (hypothetical protein, variant [Phytophthora parasitica P1569] >ETK82939.1 hypothetical protein L915_11737 [Phytophthora parasitica] >ETL36345.1 hypothetical protein, variant [Phytophthora parasitica] >ETO71564.1 hypothetical protein, variant [Phytophthora parasitica P1976] >ETP12626.1 hypothetical protein F441_11989 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 77.0 bits (188), Expect = 4.900e-10 Identity = 58/199 (29.15%), Postives = 92/199 (46.23%), Query Frame = 0 Query: 84 NLEVEEVPLVRQRLLAWKDNLHTPLLLDLAFEEPPPLPLAGEESGHEGGRRDLLERWYIVFEPLTSAVSSPFGSAGGKMVEGGGFAMQAQVKRAQKRLSVLLRTLYAFLRLAPAHGVVKKLEEVSSCAEGIGGGGAGIAPSLHAGLLNTLRGDMDALLASGKERGAEDGGTFEAYRFADVVTPYGVFRVSVAYRKDACD 283 NL++EEV VR + WK+++ PL +D+ ++ G + LLERW + F + S+ GS + Q+K KR+SVLLR L++F+R PAH + + PS+ + L+T DA A +R A +G Y F ++TP+G+ +V+ YR+D CD Sbjct: 87 NLDIEEVQAVRDSMAPWKEDVRLPLAVDIFWD--------------AGSHKVLLERWSVTFAADGESSSAHLGSTQDVI---------QQLKEVCKRISVLLRALFSFMRQLPAHRLFTQ-----------------SYPSMLSYTLHTAPAS-DATRAFEAQRVATNG-----YSFVPIMTPFGMLKVAAVYRRD-CD 238
BLAST of NO16G02570 vs. NCBI_GenBank
Match: ETL89562.1 (hypothetical protein L917_11525, partial [Phytophthora parasitica] >ETM42843.1 hypothetical protein L914_11570, partial [Phytophthora parasitica]) HSP 1 Score: 77.0 bits (188), Expect = 4.900e-10 Identity = 58/199 (29.15%), Postives = 92/199 (46.23%), Query Frame = 0 Query: 84 NLEVEEVPLVRQRLLAWKDNLHTPLLLDLAFEEPPPLPLAGEESGHEGGRRDLLERWYIVFEPLTSAVSSPFGSAGGKMVEGGGFAMQAQVKRAQKRLSVLLRTLYAFLRLAPAHGVVKKLEEVSSCAEGIGGGGAGIAPSLHAGLLNTLRGDMDALLASGKERGAEDGGTFEAYRFADVVTPYGVFRVSVAYRKDACD 283 NL++EEV VR + WK+++ PL +D+ ++ G + LLERW + F + S+ GS + Q+K KR+SVLLR L++F+R PAH + + PS+ + L+T DA A +R A +G Y F ++TP+G+ +V+ YR+D CD Sbjct: 121 NLDIEEVQAVRDSMAPWKEDVRLPLAVDIFWD--------------AGSHKVLLERWSVTFAADGESSSAHLGSTQDVI---------QQLKEVCKRISVLLRALFSFMRQLPAHRLFTQ-----------------SYPSMLSYTLHTAPAS-DATRAFEAQRVATNG-----YSFVPIMTPFGMLKVAAVYRRD-CD 272
BLAST of NO16G02570 vs. NCBI_GenBank
Match: ETL89563.1 (hypothetical protein, variant [Phytophthora parasitica] >ETM42844.1 hypothetical protein, variant [Phytophthora parasitica]) HSP 1 Score: 77.0 bits (188), Expect = 4.900e-10 Identity = 58/199 (29.15%), Postives = 92/199 (46.23%), Query Frame = 0 Query: 84 NLEVEEVPLVRQRLLAWKDNLHTPLLLDLAFEEPPPLPLAGEESGHEGGRRDLLERWYIVFEPLTSAVSSPFGSAGGKMVEGGGFAMQAQVKRAQKRLSVLLRTLYAFLRLAPAHGVVKKLEEVSSCAEGIGGGGAGIAPSLHAGLLNTLRGDMDALLASGKERGAEDGGTFEAYRFADVVTPYGVFRVSVAYRKDACD 283 NL++EEV VR + WK+++ PL +D+ ++ G + LLERW + F + S+ GS + Q+K KR+SVLLR L++F+R PAH + + PS+ + L+T DA A +R A +G Y F ++TP+G+ +V+ YR+D CD Sbjct: 87 NLDIEEVQAVRDSMAPWKEDVRLPLAVDIFWD--------------AGSHKVLLERWSVTFAADGESSSAHLGSTQDVI---------QQLKEVCKRISVLLRALFSFMRQLPAHRLFTQ-----------------SYPSMLSYTLHTAPAS-DATRAFEAQRVATNG-----YSFVPIMTPFGMLKVAAVYRRD-CD 238
BLAST of NO16G02570 vs. NCBI_GenBank
Match: XP_008908287.1 (hypothetical protein PPTG_13670 [Phytophthora parasitica INRA-310] >ETN06318.1 hypothetical protein PPTG_13670 [Phytophthora parasitica INRA-310]) HSP 1 Score: 77.0 bits (188), Expect = 4.900e-10 Identity = 58/199 (29.15%), Postives = 92/199 (46.23%), Query Frame = 0 Query: 84 NLEVEEVPLVRQRLLAWKDNLHTPLLLDLAFEEPPPLPLAGEESGHEGGRRDLLERWYIVFEPLTSAVSSPFGSAGGKMVEGGGFAMQAQVKRAQKRLSVLLRTLYAFLRLAPAHGVVKKLEEVSSCAEGIGGGGAGIAPSLHAGLLNTLRGDMDALLASGKERGAEDGGTFEAYRFADVVTPYGVFRVSVAYRKDACD 283 NL++EEV VR + WK+++ PL +D+ ++ G + LLERW + F + S+ GS + Q+K KR+SVLLR L++F+R PAH + + PS+ + L+T DA A +R A +G Y F ++TP+G+ +V+ YR+D CD Sbjct: 87 NLDIEEVQAVRDSMAPWKEDVRLPLAVDIFWD--------------AGSHKVLLERWSVTFAADGESSSAHLGSTQDVI---------QQLKEVCKRISVLLRALFSFMRQLPAHRLFTQ-----------------SYPSMLSYTLHTAPAS-DATRAFEAQRVATNG-----YSFVPIMTPFGMLKVAAVYRRD-CD 238
BLAST of NO16G02570 vs. NCBI_GenBank
Match: ETP40784.1 (hypothetical protein F442_11935 [Phytophthora parasitica P10297]) HSP 1 Score: 77.0 bits (188), Expect = 4.900e-10 Identity = 58/199 (29.15%), Postives = 92/199 (46.23%), Query Frame = 0 Query: 84 NLEVEEVPLVRQRLLAWKDNLHTPLLLDLAFEEPPPLPLAGEESGHEGGRRDLLERWYIVFEPLTSAVSSPFGSAGGKMVEGGGFAMQAQVKRAQKRLSVLLRTLYAFLRLAPAHGVVKKLEEVSSCAEGIGGGGAGIAPSLHAGLLNTLRGDMDALLASGKERGAEDGGTFEAYRFADVVTPYGVFRVSVAYRKDACD 283 NL++EEV VR + WK+++ PL +D+ ++ G + LLERW + F + S+ GS + Q+K KR+SVLLR L++F+R PAH + + PS+ + L+T DA A +R A +G Y F ++TP+G+ +V+ YR+D CD Sbjct: 87 NLDIEEVQAVRDSMAPWKEDVRLPLAVDIFWD--------------AGSHKVLLERWSVTFAADGESSSAHLGSTQDVI---------QQLKEVCKRISVLLRALFSFMRQLPAHRLFTQ-----------------SYPSMLSYTLHTAPAS-DATRAFEAQRVATNG-----YSFVPIMTPFGMLKVAAVYRRD-CD 238
BLAST of NO16G02570 vs. NCBI_GenBank
Match: XP_009537711.1 (hypothetical protein PHYSODRAFT_565817 [Phytophthora sojae] >EGZ06947.1 hypothetical protein PHYSODRAFT_565817 [Phytophthora sojae]) HSP 1 Score: 75.5 bits (184), Expect = 1.400e-9 Identity = 60/199 (30.15%), Postives = 93/199 (46.73%), Query Frame = 0 Query: 84 NLEVEEVPLVRQRLLAWKDNLHTPLLLDLAFEEPPPLPLAGEESGHEGGRRDLLERWYIVFEPLTSAVSSPFGSAGGKMVEGGGFAMQAQVKRAQKRLSVLLRTLYAFLRLAPAHGVVKKLEEVSSCAEGIGGGGAGIAPSLHAGLLNTLRGDMDALLASGKERGAEDGGTFEAYRFADVVTPYGVFRVSVAYRKDACD 283 NL++EEV VR+ + AWK+++ PL +D+ ++ AG+ G + LLERW + F + G G G + Q+K KR+SVLLR L++F+R PAH + A PS+ + ++ DA A +R A G Y F + TP+G+ +V+ YR+D CD Sbjct: 90 NLDIEEVQAVREAMSAWKEDVRLPLAIDIFWD-------AGD------GHKVLLERWSVTF--------AADGDGGSGAHLGSTQDVIQQLKEVCKRISVLLRALFSFMRQLPAHRLF-----------------AQSYPSMLSYAMHAAPAS-DAARAFETQRVATSG-----YSFIPITTPFGLLKVAAVYRRD-CD 243
BLAST of NO16G02570 vs. NCBI_GenBank
Match: XP_002903829.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY54884.1 conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 75.1 bits (183), Expect = 1.900e-9 Identity = 58/199 (29.15%), Postives = 90/199 (45.23%), Query Frame = 0 Query: 84 NLEVEEVPLVRQRLLAWKDNLHTPLLLDLAFEEPPPLPLAGEESGHEGGRRDLLERWYIVFEPLTSAVSSPFGSAGGKMVEGGGFAMQAQVKRAQKRLSVLLRTLYAFLRLAPAHGVVKKLEEVSSCAEGIGGGGAGIAPSLHAGLLNTLRGDMDALLASGKERGAEDGGTFEAYRFADVVTPYGVFRVSVAYRKDACD 283 NL++EEV VR + WK+++ PL +D+ ++ G R+ LLERW + F + S+ GS + Q+K KR+SVLLR L++F+R PAH + + PS+ + ++T A A ER A G Y F ++TP+G +V+ YR+D CD Sbjct: 87 NLDIEEVQAVRDSMTPWKEDVRLPLTIDIFWD--------------TGSRKVLLERWSVTFTADGESSSAHLGSTQDVI---------QQLKEVCKRISVLLRALFSFMRQLPAHRLFTQ-----------------SYPSMLSYSMHTASASA-ATRAFEAERVATSG-----YSFVPIMTPFGRLKVAAVYRRD-CD 238
BLAST of NO16G02570 vs. NCBI_GenBank
Match: GAY01281.1 (Hypothetical protein PINS_009140 [Pythium insidiosum]) HSP 1 Score: 73.2 bits (178), Expect = 7.100e-9 Identity = 54/224 (24.11%), Postives = 93/224 (41.52%), Query Frame = 0 Query: 84 NLEVEEVPLVRQRLLAWKDNLHTPLLLDLAFEEPPPLPLAGEESGHEGGRRDLLERWYIVFEPLTSAVS--------------------------SPFGSAGGKMVEGGGFAMQA--QVKRAQKRLSVLLRTLYAFLRLAPAHGVVKKLEEVSSCAEGIGGGGAGIAPSLHAGLLNTLRGDMDALLASGKERGAEDGGTFEAYRFADVVTPYGVFRVSVAYRKD 280 NL++EEVP +R+ + WK+++H PL++D+ +++ ++G R LLERW + + ++ AV GGG Q+K K+++VLLR L++F+RL PAH + ++ S + L + D A + G T + Y F + TP+G +V+ YR+D Sbjct: 101 NLDIEEVPFIREAMTTWKEDVHRPLVIDIFYDQ------------NDGSSRVLLERWRVEYASVSPAVEMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGSTRDVIQQLKEVCKKIAVLLRALHSFMRLLPAHRIFRQ--------------------SYPSTLAYEIHSPADDATAVDQLFGGYGIATSQ-YSFLPITTPFGFLKVTAQYRRD 291 The following BLAST results are available for this feature:
BLAST of NO16G02570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 14
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G02570 ID=NO16G02570|Name=NO16G02570|organism=Nannochloropsis oceanica|type=gene|length=4968bpback to top protein sequence of NO16G02570.1 >NO16G02570.1-protein ID=NO16G02570.1-protein|Name=NO16G02570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1361bpback to top Synonyms
Publications
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