NO16G02560, NO16G02560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G02560 vs. NCBI_GenBank
Match: XP_008609654.1 (hypothetical protein SDRG_05703 [Saprolegnia diclina VS20] >EQC36873.1 hypothetical protein SDRG_05703 [Saprolegnia diclina VS20]) HSP 1 Score: 148.7 bits (374), Expect = 8.000e-32 Identity = 61/120 (50.83%), Postives = 89/120 (74.17%), Query Frame = 0 Query: 590 LMSEILRGAHIVVEEDRGAFYSWFTHM-QDSYRRTSSHRSIVPMYGIDEGSVLRTILTGRTGDGHTWFQFEGAGWEPFKKPFESFLHAVNYVQYRVTGKQVGPLGVSAFTDRRPIRLRFD 709 ++ EI++GAH++VE D+GA+Y F ++ +Y R SSH SIV Y + +G +L T+LTG T + H+WFQFEGA W+P +PF+S LH +NY++Y+V G Q+GPLG S TDR P+R+RF+ Sbjct: 130 VLMEIVKGAHVIVENDQGAYYELFRNITATTYTRISSHASIVSQYAVPQGPLLETLLTGVTAEKHSWFQFEGANWDPIDRPFDSILHVLNYLEYKVRGVQIGPLGTSLHTDRNPLRIRFE 249
BLAST of NO16G02560 vs. NCBI_GenBank
Match: XP_012196576.1 (hypothetical protein SPRG_02622 [Saprolegnia parasitica CBS 223.65] >KDO32929.1 hypothetical protein SPRG_02622 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 144.4 bits (363), Expect = 1.500e-30 Identity = 59/120 (49.17%), Postives = 86/120 (71.67%), Query Frame = 0 Query: 590 LMSEILRGAHIVVEEDRGAFYSWFTHM-QDSYRRTSSHRSIVPMYGIDEGSVLRTILTGRTGDGHTWFQFEGAGWEPFKKPFESFLHAVNYVQYRVTGKQVGPLGVSAFTDRRPIRLRFD 709 ++ EI++GAH++VE D G +Y F ++ +Y R SSH SIV Y + +G +L T+LTG T + H+WFQFEGA W+P +P +S LH +NY++Y+V G Q+GPLG S TDR P+R+RF+ Sbjct: 132 VLMEIVKGAHVIVENDHGTYYELFRNITATTYTRISSHASIVSQYAVPQGPLLETLLTGVTAEKHSWFQFEGANWDPIDRPIDSILHVLNYLEYKVRGVQIGPLGTSLHTDRNPLRIRFE 251
BLAST of NO16G02560 vs. NCBI_GenBank
Match: CBJ29488.1 (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 142.9 bits (359), Expect = 4.400e-30 Identity = 81/237 (34.18%), Postives = 113/237 (47.68%), Query Frame = 0 Query: 526 CSVTYKMNVSEHEAKAIDLDPYDQELLGTIMVRICNCGC--------------------ARQDXXXXXXXXXXXXXXXRV----DSLTLMSEILRGAHIVVEEDRGAFYSWFTHMQDSYRRTSSHRSIVPMYGIDEGSVLRTILTGRTGDGHTWFQFEGAGWEPFKKPFESFLHAVNYVQYRVTGKQVGPLGVSAFTDRRPIRLRFDGCLDAGVEGEREEDAGREGGQEGRGRRRLL 739 C + Y ++ + + L + ELLGT+ R+C C C A D V ++ E+L+GA++V+ D G FY WF MQD+Y RT SH S GI EG+VLRT+LTG +WFQ EGA W PF+ P ++ H N++QY++ QVGPLG S TD +P+ + FDGC+ R DA +G G R L+ Sbjct: 232 CPLIYTVDAKTAKKHGLLLFQEELELLGTVTARLCRCLCHSPVVHTQDHPQGQRRTAFAAASDSGHKSAEAERPHRRLGVCEGEAHALMLEEMLKGANVVISGDSGWFYRWFESMQDAYARTCSHFSTRSTLGIPEGTVLRTVLTGTDMYEDSWFQLEGAAWRPFRHPIDAVRHGFNFMQYKLRQSQVGPLGKSTHTDLQPMMVTFDGCV-------RRNDAQSDGDDSRHGGRLLI 461
BLAST of NO16G02560 vs. NCBI_GenBank
Match: XP_009821561.1 (hypothetical protein H257_00529 [Aphanomyces astaci] >ETV89161.1 hypothetical protein H257_00529 [Aphanomyces astaci]) HSP 1 Score: 140.6 bits (353), Expect = 2.200e-29 Identity = 61/120 (50.83%), Postives = 84/120 (70.00%), Query Frame = 0 Query: 590 LMSEILRGAHIVVEEDRGAFYSWF-THMQDSYRRTSSHRSIVPMYGIDEGSVLRTILTGRTGDGHTWFQFEGAGWEPFKKPFESFLHAVNYVQYRVTGKQVGPLGVSAFTDRRPIRLRFD 709 LM EI++GAH+VVE D+G FY F T +Y R SSH S YG+ +G +L T+LTG T +WFQFEGA W+P +P +SF+H +NY++Y++ G QVGPLG S +TD+ P+R+ FD Sbjct: 136 LMMEIVKGAHVVVENDQGRFYELFRTISTSTYSRISSHFSNDVQYGVPQGYLLDTLLTGTTSGNDSWFQFEGANWDPIGRPVDSFIHCLNYIEYKIRGVQVGPLGTSMYTDQNPLRIPFD 255
BLAST of NO16G02560 vs. NCBI_GenBank
Match: XP_008609656.1 (hypothetical protein SDRG_05705 [Saprolegnia diclina VS20] >EQC36875.1 hypothetical protein SDRG_05705 [Saprolegnia diclina VS20]) HSP 1 Score: 138.7 bits (348), Expect = 8.300e-29 Identity = 61/119 (51.26%), Postives = 82/119 (68.91%), Query Frame = 0 Query: 590 LMSEILRGAHIVVEEDRGAFYSWFTHMQ-DSYRRTSSHRSIVPMYGIDEGSVLRTILTGRTGDGHTWFQFEGAGWEPFKKPFESFLHAVNYVQYRVTGKQVGPLGVSAFTDRRPIRLRF 708 L+ EILRGAH+VV +DRG +Y ++ +Y R SSH S P Y + +G +L TIL G T +WFQFEGA W+PF KP +S LH ++Y++Y + G QVGPLG SAFTD+ P+R+ F Sbjct: 116 LLMEILRGAHVVVADDRGYYYDLLQNVSGQAYARISSHYSAAPQYAVPQGPLLDTILVGTTARNDSWFQFEGASWDPFAKPVDSALHVLHYLEYSLRGVQVGPLGTSAFTDKTPLRIAF 234
BLAST of NO16G02560 vs. NCBI_GenBank
Match: OQR99358.1 (hypothetical protein ACHHYP_06918 [Achlya hypogyna]) HSP 1 Score: 138.3 bits (347), Expect = 1.100e-28 Identity = 58/121 (47.93%), Postives = 84/121 (69.42%), Query Frame = 0 Query: 589 TLMSEILRGAHIVVEEDRGAFYSWFTHMQ-DSYRRTSSHRSIVPMYGIDEGSVLRTILTGRTGDGHTWFQFEGAGWEPFKKPFESFLHAVNYVQYRVTGKQVGPLGVSAFTDRRPIRLRFD 709 T++ E+L+GAH+VVE D G FY ++ +Y R SSH S+ Y + +G +L T+LTG T +WFQFEGA W+P ++P +S LH +NYV+Y++ G Q+GPLG S TDR P+R+RF+ Sbjct: 125 TVLMELLKGAHVVVENDAGVFYGLLKNISTTTYPRISSHVSVATQYAVPQGPLLDTLLTGTTLSNDSWFQFEGANWDPVERPVDSMLHVLNYVEYKIRGVQIGPLGTSEHTDRSPLRIRFE 245
BLAST of NO16G02560 vs. NCBI_GenBank
Match: XP_008862557.1 (hypothetical protein H310_01270 [Aphanomyces invadans] >ETW08752.1 hypothetical protein H310_01270 [Aphanomyces invadans]) HSP 1 Score: 135.2 bits (339), Expect = 9.100e-28 Identity = 59/119 (49.58%), Postives = 81/119 (68.07%), Query Frame = 0 Query: 590 LMSEILRGAHIVVEEDRGAFYSWFTHMQDS-YRRTSSHRSIVPMYGIDEGSVLRTILTGRTGDGHTWFQFEGAGWEPFKKPFESFLHAVNYVQYRVTGKQVGPLGVSAFTDRRPIRLRF 708 LM EI++GAH+VVE D+G FY F + S Y R SSH S Y + +G +L T+LTG T + +WFQFEGA W+P +P +S +H +NY++Y++ G QVGPLG S TDR P+R+ F Sbjct: 139 LMMEIVKGAHVVVENDQGRFYELFKSISTSTYSRISSHFSNNVQYSVPQGYLLDTLLTGTTSNNDSWFQFEGANWDPLGRPLDSLIHCLNYIEYKIRGVQVGPLGTSMHTDRNPLRIPF 257
BLAST of NO16G02560 vs. NCBI_GenBank
Match: XP_012196578.1 (hypothetical protein SPRG_02624 [Saprolegnia parasitica CBS 223.65] >KDO32931.1 hypothetical protein SPRG_02624 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 134.8 bits (338), Expect = 1.200e-27 Identity = 57/117 (48.72%), Postives = 82/117 (70.09%), Query Frame = 0 Query: 590 LMSEILRGAHIVVEEDRGAFYSWFTHMQ-DSYRRTSSHRSIVPMYGIDEGSVLRTILTGRTGDGHTWFQFEGAGWEPFKKPFESFLHAVNYVQYRVTGKQVGPLGVSAFTDRRPIRL 706 L+ EILRGAH+VV +DRG +Y ++ +Y+R SSH S P Y + +G +L TIL G T +WFQFEGA W+PF +P +S LH +++++Y + G Q+GPLG SAFTD+ P+R+ Sbjct: 121 LLMEILRGAHVVVADDRGYYYDLLQNVSAQAYKRISSHYSSAPQYAVPQGPLLDTILVGTTARNDSWFQFEGAAWDPFARPIDSVLHVLHFLEYSLRGVQIGPLGTSAFTDKTPLRI 237
BLAST of NO16G02560 vs. NCBI_GenBank
Match: OQS02623.1 (hypothetical protein THRCLA_05027 [Thraustotheca clavata]) HSP 1 Score: 134.4 bits (337), Expect = 1.600e-27 Identity = 56/120 (46.67%), Postives = 83/120 (69.17%), Query Frame = 0 Query: 590 LMSEILRGAHIVVEEDRGAFYSWFTHMQ-DSYRRTSSHRSIVPMYGIDEGSVLRTILTGRTGDGHTWFQFEGAGWEPFKKPFESFLHAVNYVQYRVTGKQVGPLGVSAFTDRRPIRLRFD 709 ++ EI++GAH++VE D+G +Y F ++ +Y R SSH SI Y + +G +L T+LTGRT +WFQFEGA W+P +P +S LH +NYV+Y++ G Q+GPLG S TDR P+ + F+ Sbjct: 129 VLMEIMKGAHVIVENDQGRYYELFKNISCTTYSRISSHYSIDVQYAVPQGPLLDTLLTGRTVTNDSWFQFEGANWDPIDRPIDSMLHVLNYVEYKIRGVQIGPLGTSKHTDRNPLLIPFE 248
BLAST of NO16G02560 vs. NCBI_GenBank
Match: EWM23860.1 (hypothetical protein Naga_100903g1 [Nannochloropsis gaditana]) HSP 1 Score: 132.1 bits (331), Expect = 7.700e-27 Identity = 66/100 (66.00%), Postives = 71/100 (71.00%), Query Frame = 0 Query: 556 MVRICNCGCARQ-------DXXXXXXXXXXXXXXXRVDSLTLMSEILRGAHIVVEEDRGAFYSWFTHMQDSYRRTSSHRSIVPMYGIDEGSVLRTILTGR 649 MVR+CNCGCA+ RVDSLTLMSEILRGAH+V+E DRGAFYSWF MQDSYRRTSSH S VPMYGID+GSVLRTILTGR Sbjct: 1 MVRLCNCGCAQDGETDPPAPSFSSRPHPIAPPPPPRVDSLTLMSEILRGAHVVIENDRGAFYSWFVRMQDSYRRTSSHLSTVPMYGIDQGSVLRTILTGR 100 The following BLAST results are available for this feature:
BLAST of NO16G02560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G02560 ID=NO16G02560|Name=NO16G02560|organism=Nannochloropsis oceanica|type=gene|length=3302bpback to top protein sequence of NO16G02560.1 >NO16G02560.1-protein ID=NO16G02560.1-protein|Name=NO16G02560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=813bpback to top Synonyms
Publications
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