NO16G02550, NO16G02550 (gene) Nannochloropsis oceanica

Overview
NameNO16G02550
Unique NameNO16G02550
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2037
Alignment locationchr16:732341..734377 +

Link to JBrowse

Properties
Property NameValue
DescriptionProtein of unknown function (DUF155)
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:732341..734377 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003734DUF155
Homology
BLAST of NO16G02550 vs. NCBI_GenBank
Match: XP_005853877.1 (hypothetical protein NGA_0437300 [Nannochloropsis gaditana CCMP526] >EKU22484.1 hypothetical protein NGA_0437300 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 509.2 bits (1310), Expect = 1.400e-140
Identity = 253/293 (86.35%), Postives = 271/293 (92.49%), Query Frame = 0
Query:  183 IPNQSGRVSVMAFYVGQKLDLVAVVQANFLSHRGYKVSDDILVVPLEDRGPEARGREGGKEGWKNVKSAVVVFKHGSVVFFNVEDDKQARYLHAMTRHCGEVVPQSHRFRETLECRLRPWQEKYHEMGQDVVHLRELNEDSIKVVADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDAMSSGLLEQSKPAWNFNRLDALWNDLRHEFSIGDRFGKVEHKITHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYHQILV 476
            I    GRVSVMAFYVGQ LDLV+VVQANFLS +GYK+SDD+L+VPLED+G      + G   WKNV+SA+VVFKHGSVVFFNV D +QA+YLH+++RHCGEVVPQSHRFRETLEC +RPWQEKYH MGQDVV LRELNEDSIKV+ADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDAMSSGLLEQSKPAWNFNRLDALWNDLR EFSIG+RFGKVEHKI+HVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYHQILV
Sbjct:   52 IEPSGGRVSVMAFYVGQNLDLVSVVQANFLSQQGYKMSDDLLLVPLEDKGERKHSSQEGTV-WKNVQSALVVFKHGSVVFFNVPDGEQAKYLHSLSRHCGEVVPQSHRFRETLECWVRPWQEKYHVMGQDVVQLRELNEDSIKVLADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDAMSSGLLEQSKPAWNFNRLDALWNDLRDEFSIGERFGKVEHKISHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYHQILV 343          
BLAST of NO16G02550 vs. NCBI_GenBank
Match: EWM23871.1 (Protein of unknown function DUF155 [Nannochloropsis gaditana])

HSP 1 Score: 509.2 bits (1310), Expect = 1.400e-140
Identity = 253/293 (86.35%), Postives = 271/293 (92.49%), Query Frame = 0
Query:  183 IPNQSGRVSVMAFYVGQKLDLVAVVQANFLSHRGYKVSDDILVVPLEDRGPEARGREGGKEGWKNVKSAVVVFKHGSVVFFNVEDDKQARYLHAMTRHCGEVVPQSHRFRETLECRLRPWQEKYHEMGQDVVHLRELNEDSIKVVADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDAMSSGLLEQSKPAWNFNRLDALWNDLRHEFSIGDRFGKVEHKITHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYHQILV 476
            I    GRVSVMAFYVGQ LDLV+VVQANFLS +GYK+SDD+L+VPLED+G      + G   WKNV+SA+VVFKHGSVVFFNV D +QA+YLH+++RHCGEVVPQSHRFRETLEC +RPWQEKYH MGQDVV LRELNEDSIKV+ADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDAMSSGLLEQSKPAWNFNRLDALWNDLR EFSIG+RFGKVEHKI+HVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYHQILV
Sbjct:  169 IEPSGGRVSVMAFYVGQNLDLVSVVQANFLSQQGYKMSDDLLLVPLEDKGERKHSSQEGTV-WKNVQSALVVFKHGSVVFFNVPDGEQAKYLHSLSRHCGEVVPQSHRFRETLECWVRPWQEKYHVMGQDVVQLRELNEDSIKVLADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDAMSSGLLEQSKPAWNFNRLDALWNDLRDEFSIGERFGKVEHKISHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYHQILV 460          
BLAST of NO16G02550 vs. NCBI_GenBank
Match: XP_024393700.1 (uncharacterized protein LOC112291011 [Physcomitrella patens] >PNR41215.1 hypothetical protein PHYPA_018618 [Physcomitrella patens])

HSP 1 Score: 171.8 bits (434), Expect = 5.200e-39
Identity = 109/310 (35.16%), Postives = 172/310 (55.48%), Query Frame = 0
Query:  173 SLRPSLPASTIPNQSGRVSVMAFYVGQKLDLVAVVQANFLSHRGYKVSDDILVVPLEDRGPEAR---GREGGKEGWKNVKSAVVVFKHGSVVFFNVEDDKQARYLHAMTRHCGEVVPQSHRFRETLE----CRLRPWQEKYHEMGQDVVHLRELNEDSIKVVADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDA-MSSGLLEQSKPAWNFNRLDALWNDLRHEFSIGDRFGKVEHKITHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYHQIL 475
            SL P+ P          + V A Y+ + +DL  + +  FL       S + L++   +R   A+    R G  E  ++    +V F++GS+VFFN  DD++   L A+++ C      + +FRET +      +RP   ++ E GQD + LR L+ D+I+V++ ++G S+AL+ Y KK D M+  F  LN  +E +G FT M +K LF+LVA  N  L D  +  GLLE+S  AW       +W  LR +F + +RF  ++ K+  +Q N +FFLE+L ++KS+ LEWIII+LI  EI   C+ +Y  +L
Sbjct:  220 SLSPN-PPPKFQQDDVYIPVKACYISRSVDLKRLSEEPFLE---ITPSRNNLIIRFTNRPANAKPTSNRPGFAEISRSQDRYMVAFQYGSIVFFNFCDDEEEEALSALSKFC------TDKFRETRKDDYGVLVRPTLRQWSEGGQDRIMLRMLDTDNIRVISSILGQSIALDHYAKKVDEMVNTFSELNRGMENTGTFT-MTRKSLFQLVAAANTTLADVILRLGLLERSDAAWKDANYAQIWEYLRDDFELDERFESLDFKLNIIQHNVRFFLEILQNRKSDTLEWIIILLITGEI---CVGVYQILL 515          
BLAST of NO16G02550 vs. NCBI_GenBank
Match: PTQ37177.1 (hypothetical protein MARPO_0059s0101 [Marchantia polymorpha])

HSP 1 Score: 171.8 bits (434), Expect = 5.200e-39
Identity = 111/316 (35.13%), Postives = 173/316 (54.75%), Query Frame = 0
Query:  165 DSAHDLSPSLRPSLPASTIPNQSGRVSVMAFYVGQKLDLVAVVQANFLSHRGYKVSDDILVVPLEDRGPEARGREGGKE----GWKNVKSAVVVFKHGSVVFFNVEDDKQARYLHAMTRHCGEVVPQSHRFRETLE----CRLRPWQEKYHEMGQDVVHLRELNEDSIKVVADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDA-MSSGLLEQSKPAWNFNRLDALWNDLRHEFSIGDRFGKVEHKITHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYH 472
            DS  +   + +PS P    P+    + V AFY+ + +DL A+ +  F        S + L++   DR P +       E    G+   +  +V F++GSVVFFN  D ++   L  + ++C      S  FRET +      +RP   ++ E G D V LR+L+ D+I+V++ ++G S+AL+ Y KK D M+  F  LN  +E +G FT M +K LF+LVA  N  L D  +  GLLE+S  AW       +W  +R +F + +RF  ++ K+  +Q N +FFLE+L ++KS+ LEWIII+LI  EI +S  D+ H
Sbjct:  249 DSRDNRPRTHQPSSPTDAEPDDI-FIPVKAFYISRSVDLKALAREPFSE---VTTSRNNLIIRCADRPPHSPVTADNPEMACLGFLK-ERYMVAFQYGSVVFFNFGDHEEVESLDIVRKYC------SDEFRETRKDDYGVLVRPTLPEWSEGGHDRVMLRKLDIDNIRVISSILGQSIALDHYAKKVDEMVTTFSELNRGMEQTGTFT-MTRKSLFQLVAAANTTLADVILRLGLLERSDAAWKDANYAQIWEYMRDDFELDERFESLDFKLNIIQHNVRFFLEILQNRKSDTLEWIIILLITGEICVSLYDILH 552          
BLAST of NO16G02550 vs. NCBI_GenBank
Match: XP_024400311.1 (uncharacterized protein LOC112294256 [Physcomitrella patens] >PNR36582.1 hypothetical protein PHYPA_022433 [Physcomitrella patens])

HSP 1 Score: 170.2 bits (430), Expect = 1.500e-38
Identity = 104/293 (35.49%), Postives = 167/293 (57.00%), Query Frame = 0
Query:  190 VSVMAFYVGQKLDLVAVVQANFLSHRGYKVSDDILVVPLEDRGPEAR---GREGGKEGWKNVKSAVVVFKHGSVVFFNVEDDKQARYLHAMTRHCGEVVPQSHRFRETLE----CRLRPWQEKYHEMGQDVVHLRELNEDSIKVVADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDA-MSSGLLEQSKPAWNFNRLDALWNDLRHEFSIGDRFGKVEHKITHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYHQIL 475
            + V A Y+ + +DL  + +  FL       S + +++   +R  +A+    R G  E  ++ +  +V F++GS+VFFN  DD++   L A+ + C      +  FRET +      +RP   ++ E GQD + LR L+ D+I+V++ ++G S+AL+ Y KK D M+  F  LN  +E +G FT M +K LF+LVA  N  L D  +  GLLE+S  AW       +W  LR +F + +RF  ++ K+  +Q N +FFLE+L ++KS+ LEWIII+LI  EI   C+ +Y  +L
Sbjct:  232 IPVKACYISRSMDLKRLSEEPFLE---ITPSRNNIIIRFTNRPADAKPTSNRPGFAEISRSQERYMVAFQYGSIVFFNFGDDEEEEALAAVRKFC------TDEFRETRKDDYGVLVRPTLRQWSEGGQDRIMLRMLDTDNIRVISSILGQSIALDHYAKKVDEMVNTFSELNRGMEKTGTFT-MTRKSLFQLVAAANTTLADVILRLGLLERSDAAWKDANYAQIWEYLRDDFELDERFESLDFKLNIIQHNVRFFLEILQNRKSDTLEWIIILLITGEI---CVGVYQILL 511          
BLAST of NO16G02550 vs. NCBI_GenBank
Match: XP_002286038.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED95679.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 164.5 bits (415), Expect = 8.200e-37
Identity = 84/220 (38.18%), Postives = 139/220 (63.18%), Query Frame = 0
Query:  252 VVVFKHGSVVFFNVEDDKQARYLHAMTRHCGEVVPQSHRFRETLECRLRPWQE-KYHEMGQDVVHLRELNEDSIKVVADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDAMSS-GLLEQSKPAWNFNRLDALWNDLRHEFSIGDRFGKVEHKITHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDL 470
            V +++ GSVVFFNV   + ++ L  + +H  + +      RE  E  L+P  E     +  D   +R+L+ +++ +V++++G +VAL++YN   D +L +F  +N+SVE  G FT M++  LF++VA NN +  D +   G+ ++S  AW+ ++ +AL + +R EF + +RF  +E K+  +Q N KFFLEVL+ QKSN LEW+IIVLI+ E VL C+D+
Sbjct:  438 VAIYRFGSVVFFNVTTKEASKLLEQIKKHSTDPIAVGFERREFFEMALQPQLEMATGNISADRAMVRDLDMNTVGIVSNIMGQTVALDWYNDTVDELLANFSNINSSVERFGNFTSMERNSLFQVVARNNSLFIDMVGKLGIKDRSDTAWHLSQYEALHDGMRKEFDLDERFKHIEFKLNLIQQNAKFFLEVLHAQKSNTLEWVIIVLISFECVLMCLDM 657          
BLAST of NO16G02550 vs. NCBI_GenBank
Match: PIN16714.1 (hypothetical protein CDL12_10628 [Handroanthus impetiginosus])

HSP 1 Score: 163.3 bits (412), Expect = 1.800e-36
Identity = 97/289 (33.56%), Postives = 160/289 (55.36%), Query Frame = 0
Query:  190 VSVMAFYVGQKLDLVAVVQ---ANFLSHRGYKVSDDILVVPLEDRGPEARGREGGKEGWKNVKSAVVVFKHGSVVFFNVEDDKQARYLHAMTRHCGEVVPQSHRFRETLECRLRPWQEKYHEMGQDVVHLRELNEDSIKVVADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDA-MSSGLLEQSKPAWNFNRLDALWNDLRHEFSIGDRFGKVEHKITHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYHQIL 475
            + V A++   ++DL  +V+    NF+         + +V+   D  P   G      G  N    +VVF++GS+V FNV D +   YL  + RH   ++P+    ++  E R +P  + + + G D + L+ LN D I+ +  V+G S+AL++Y ++ D M+ +F  +N  +E +G FT M +K LF+LV   N  L D  +  GL E+S  AW   +   +W  LR EF +  RFG ++ K+  V+ N +F  E+L ++KS+ LEW+II+LI AEI++S  D+ H+ L
Sbjct:  123 IPVRAYFFSTRVDLRTLVEQNKQNFIPPSSRMT--NYVVLRFGDLKPNPNGLRSSLSG--NDCCYMVVFQYGSIVLFNVRDHEVDGYLKIVRRHASGLLPEMR--KDEYEVREKPTLDTWMQGGLDYIMLQYLNIDGIRTIGSVLGQSIALDYYVRQVDGMVAEFTDINRGMEKTGTFT-MQRKKLFQLVGKANSNLADVILKLGLFERSDIAWKDAKYAQIWEYLRDEFELTQRFGSLDFKLKFVEHNIRFLQEILQNRKSDFLEWLIIILIGAEILISVYDIAHKSL 404          
BLAST of NO16G02550 vs. NCBI_GenBank
Match: XP_012834702.1 (PREDICTED: uncharacterized protein LOC105955512 [Erythranthe guttata] >EYU39560.1 hypothetical protein MIMGU_mgv1a007697mg [Erythranthe guttata])

HSP 1 Score: 162.9 bits (411), Expect = 2.400e-36
Identity = 98/289 (33.91%), Postives = 162/289 (56.06%), Query Frame = 0
Query:  190 VSVMAFYVGQKLDLVAVVQ---ANFLSHRGYKVSDDILVVPLEDRGPEARGREGGKEGWKNVKSAVVVFKHGSVVFFNVEDDKQARYLHAMTRHCGEVVPQSHRFRETLECRLRPWQEKYHEMGQDVVHLRELNEDSIKVVADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDA-MSSGLLEQSKPAWNFNRLDALWNDLRHEFSIGDRFGKVEHKITHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYHQIL 475
            +SV A++    +DL ++V+    NF+         + +V+   D  P+  G      G  N    +VVF++GS+V FNV D +   YL  + RH   ++P+    ++  E R +P    + + G D + L+ LN D I+ +  V+G S+AL++Y ++ D M+ +F  +N  +E +G FT M++K LF+LV   N  L D  +  GL E+S  AW   +   +W  LR EF +  RF  ++ K+  V+ N +F  E+L ++KS+ LEW+II+LIAAEI++S  D+ H+ L
Sbjct:  117 ISVRAYFFSTSVDLKSLVEQNKQNFIPPSSRMT--NYVVLRFGDLRPDPNGLSSSLHG--NDCCYMVVFQYGSIVLFNVRDHEVDGYLKIIERHSSGLLPEMR--KDEYEVREKPNLNTWMQGGLDYITLQYLNVDGIRTIGSVLGQSIALDYYVRQVDGMVAEFTDINRGMEKTGTFT-MERKKLFQLVGKANSNLADVILKLGLFERSDIAWKDAKYAQIWEYLRDEFELTARFAGLDFKLKFVEHNIRFLQEILQNRKSDFLEWLIIILIAAEILISVYDIAHKSL 398          
BLAST of NO16G02550 vs. NCBI_GenBank
Match: OAE35545.1 (hypothetical protein AXG93_2782s1290 [Marchantia polymorpha subsp. ruderalis] >PTQ37176.1 hypothetical protein MARPO_0059s0101 [Marchantia polymorpha])

HSP 1 Score: 162.9 bits (411), Expect = 2.400e-36
Identity = 111/339 (32.74%), Postives = 173/339 (51.03%), Query Frame = 0
Query:  165 DSAHDLSPSLRPSLPASTIPNQSGRVSVMAFYVGQKLDLVAVVQANFLSHRGYKVSDDILVVPLEDRGPEARGREGGKE----GWKNVKSAVVVFKHGSVVFFNVEDDKQARYLHAMTRHCGEVVPQSHRFRETLE---------------------------CRLRPWQEKYHEMGQDVVHLRELNEDSIKVVADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDA-MSSGLLEQSKPAWNFNRLDALWNDLRHEFSIGDRFGKVEHKITHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDLYH 472
            DS  +   + +PS P    P+    + V AFY+ + +DL A+ +  F        S + L++   DR P +       E    G+   +  +V F++GSVVFFN  D ++   L  + ++C      S  FRET +                             +RP   ++ E G D V LR+L+ D+I+V++ ++G S+AL+ Y KK D M+  F  LN  +E +G FT M +K LF+LVA  N  L D  +  GLLE+S  AW       +W  +R +F + +RF  ++ K+  +Q N +FFLE+L ++KS+ LEWIII+LI  EI +S  D+ H
Sbjct:  249 DSRDNRPRTHQPSSPTDAEPDDI-FIPVKAFYISRSVDLKALAREPFSE---VTTSRNNLIIRCADRPPHSPVTADNPEMACLGFLK-ERYMVAFQYGSVVFFNFGDHEEVESLDIVRKYC------SDEFRETRKDVAITLKAVISGSGPPVKKRLKYLNYGVLVRPTLPEWSEGGHDRVMLRKLDIDNIRVISSILGQSIALDHYAKKVDEMVTTFSELNRGMEQTGTFT-MTRKSLFQLVAAANTTLADVILRLGLLERSDAAWKDANYAQIWEYMRDDFELDERFESLDFKLNIIQHNVRFFLEILQNRKSDTLEWIIILLITGEICVSLYDILH 575          
BLAST of NO16G02550 vs. NCBI_GenBank
Match: GAQ81703.1 (hypothetical protein KFL_000880170 [Klebsormidium nitens])

HSP 1 Score: 162.5 bits (410), Expect = 3.100e-36
Identity = 97/279 (34.77%), Postives = 159/279 (56.99%), Query Frame = 0
Query:  196 YVGQKLDLVAVVQANF----LSHRGYKVSDDILVVPLEDRGPEARGREGGKEGWKNVKSAVVVFKHGSVVFFNVEDDKQARYLHAMTRHCGEVVPQSHRFRETLECRLRPWQEKYHEMGQDVVHLRELNEDSIKVVADVIGHSVALNFYNKKADRMLEDFRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDA-MSSGLLEQSKPAWNFNRLDALWNDLRHEFSIGDRFGKVEHKITHVQSNTKFFLEVLNHQKSNKLEWIIIVLIAAEIVLSCIDL 470
            Y+ ++++L  +V+  +    ++HRG  V     +V  +DR     G + G   +      ++VF +G++VFFN +  + A  L  +++ C   + +  R  +     +R   EKY   G D V +R+LNE++I+V+  ++G SVAL+ Y  + DRM+  F  LN  +   G FT + +KDLFKL+ + N  +TD  +   LL +S  AW F     +W  +R +F I DRF  + +K++ +Q+N KFFL VL ++KS+ LEWIII LI+AEI+L   D+
Sbjct:    7 YIARRINLGKLVEGAYPDRTVNHRGNNV-----IVRFKDRKTPPTGHKQGARLF--APRWMIVFDYGALVFFNFDQSELAAELQVVSQFCETALEE--RMTDDYGVFVRHSLEKYSVGGPDYVLIRDLNENAIRVIGSILGQSVALDHYTVEVDRMIARFGQLNKDMMELGSFT-ITRKDLFKLIGVVNTTITDVIIKLELLNRSDTAWKFADYGKIWEYMRGDFDIADRFDSLNYKLSVIQANVKFFLGVLQNRKSDTLEWIIIALISAEIILGIYDI 275          
The following BLAST results are available for this feature:
BLAST of NO16G02550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005853877.11.400e-14086.35hypothetical protein NGA_0437300 [Nannochloropsis ... [more]
EWM23871.11.400e-14086.35Protein of unknown function DUF155 [Nannochloropsi... [more]
XP_024393700.15.200e-3935.16uncharacterized protein LOC112291011 [Physcomitrel... [more]
PTQ37177.15.200e-3935.13hypothetical protein MARPO_0059s0101 [Marchantia p... [more]
XP_024400311.11.500e-3835.49uncharacterized protein LOC112294256 [Physcomitrel... [more]
XP_002286038.18.200e-3738.18predicted protein [Thalassiosira pseudonana CCMP13... [more]
PIN16714.11.800e-3633.56hypothetical protein CDL12_10628 [Handroanthus imp... [more]
XP_012834702.12.400e-3633.91PREDICTED: uncharacterized protein LOC105955512 [E... [more]
OAE35545.12.400e-3632.74hypothetical protein AXG93_2782s1290 [Marchantia p... [more]
GAQ81703.13.100e-3634.77hypothetical protein KFL_000880170 [Klebsormidium ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL151nonsL151Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR034ngnoR034Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR032ngnoR032Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003254NSK003254Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G02550.1NO16G02550.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593923gene_6151Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100202g3gene6598Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G02550.1NO16G02550.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G02550 ID=NO16G02550|Name=NO16G02550|organism=Nannochloropsis oceanica|type=gene|length=2037bp
CGACAGGCAGTCCAGGCCAGCGCAGCCATGCAGACATGCATTTTGCGCCC
CACCAAGCAACTGACCGCATTGGCAACGTCAACGGGCGCCAGGATGGTGC
GGCGGCGGACCAGCAACACAGGCAGCCTGTCTATCTCCAGCTCGGGGGCT
TCGCACCCCACTGCTGCCACTGTGGCGGTCATGACTCGCAGCAGCAGCAA
TAGCACCACCAACATGGACACCACCTCCGCCGCCCGCAGTCAAAGAATGT
GCATACACACACTTTCTGCTGCGTCCAAGCAGCCCTCGATGGCAGCACCT
TTGCAGGCAGGAACTATGGCACCATTTTCCAGCCAACCCGGgtacgtaga
tgtatgtgctaagtcctatgcctttccctccttcatgtgtgttaattgtt
tgtcgttcaccgcattcttcaaaacattacaaggtatgagaagtgcacct
tgttgaatcatggcgctcatgctttccatgattgtgtctcaagcctctgg
tcccatcgagatcgtgagccctcacctcgcttacctccccccacctcaaa
accccccccccaaaaaaaagGAGTCACCCTCAGCAGCAGCAACAGCAGCA
GCAACAGCGGTATCAACAACAGCAAACATCCCAGCCCACTCCGCACCATA
TCCCTCCCCCTCCTCGTCCTATTCCTTCCCCGCACCCGCTCCATGTCCCC
TCCGGCTCTCATTCTCCCACCGCCGCCGCCACCTTAGAGGTCAGCGATGA
TAGCGCCCATGACCTCTCGCCCTCCCTCCGTCCCTCCCTTCCTGCTTCTA
CGATCCCTAATCAGAGCGGGCGGGTGAGCGTCATGGCTTTCTATGTCGGG
CAGAAATTAGATTTGGTCGCCGTGGTGCAAGCGAACTTTCTGTCCCACCG
AGGGTACAAAGTGAGTGACGACATCCTGGTGGTGCCTTTGGAGGATAGAG
GGCCTGAAGCGAGAGGGAGGGAGGGAGGGAAGGAGGGTTGGAAGAATGTA
AAGAGCGCGGTGGTAGTGTTTAAGCATGGGTCGGTCGTGTTCTTCAACGT
GGAGGATGACAAGCAGGCGAGGTACTTGCACGCCATGACGCGGCATTGCG
GAGAGGTGGTACCGCAGTCACACAGGTTTCGAGAGACCCTGGAATGCCGC
CTTCGGCCATGGCAGGAGAAGTACCACGAGATGGGCCAAGATGTGGTGCA
CCTCCGCGAGCTCAACGAGGACTCCATCAAGGTGGTGGCTGATGTAATAG
GGCACAGCGTCGCCTTGAACTTTTATAATAAGAAGGCGGATAGGATGCTG
GAGGACTTCAGAGTACTGAATAACAGTGTGGAGGGATCGGGGGTGTTCAC
GGAGATGGATAAGAAGGATTTGTTCAAGCTAgtaagtccagagggagcga
tagagggaaggagggaggggggaggaagcgagaggggtggggggtacgac
tgtaggacactcagaggacgatctcatctcttctggagccgaatcatcga
tgacaaaaaatatttataatactcctcctccatccggtcctccctctcct
cctccacccagGTGGCGCTGAACAACAAGATTCTAACCGACGCCATGTCG
TCGGGCCTGCTCGAGCAGTCCAAGCCCGCTTGGAACTTCAATCGCTTGGA
CGCCCTGTGGAATGATTTGAGGCATGAATTCAGCATTGGCGATCGgtgcg
tgctgattcacacacgctttctgtatcctccctctttccacattttaatt
tattttctccatttctttttggttttccttttcccctttccttcactttt
cttttcacgcctcggcgtaaatacttacgtgcatcaccctccctctctat
tttcccctacctcctcagGTTCGGCAAGGTCGAGCACAAGATCACGCACG
TCCAGAGCAATACCAAATTCTTCCTCGAGGTCCTCAACCACCAGAAGAGC
AACAAGTTGGAGTGGATCATCATCGTCTTAATCGCGGCAGAGATCGTTTT
GTCGTGCATTGACCTCTACCACCAGATTTTGGTGTAG
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protein sequence of NO16G02550.1

>NO16G02550.1-protein ID=NO16G02550.1-protein|Name=NO16G02550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=476bp
MQTCILRPTKQLTALATSTGARMVRRRTSNTGSLSISSSGASHPTAATVA
VMTRSSSNSTTNMDTTSAARSQRMCIHTLSAASKQPSMAAPLQAGTMAPF
SSQPGSHPQQQQQQQQQRYQQQQTSQPTPHHIPPPPRPIPSPHPLHVPSG
SHSPTAAATLEVSDDSAHDLSPSLRPSLPASTIPNQSGRVSVMAFYVGQK
LDLVAVVQANFLSHRGYKVSDDILVVPLEDRGPEARGREGGKEGWKNVKS
AVVVFKHGSVVFFNVEDDKQARYLHAMTRHCGEVVPQSHRFRETLECRLR
PWQEKYHEMGQDVVHLRELNEDSIKVVADVIGHSVALNFYNKKADRMLED
FRVLNNSVEGSGVFTEMDKKDLFKLVALNNKILTDAMSSGLLEQSKPAWN
FNRLDALWNDLRHEFSIGDRFGKVEHKITHVQSNTKFFLEVLNHQKSNKL
EWIIIVLIAAEIVLSCIDLYHQILV*
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Synonyms
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