NO16G02360, NO16G02360 (gene) Nannochloropsis oceanica

Overview
NameNO16G02360
Unique NameNO16G02360
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2107
Alignment locationchr16:679346..681452 -

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Properties
Property NameValue
DescriptionD-lactate dehydrogenase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:679346..681452 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016614oxidoreductase activity, acting on CH-OH group of donors
GO:0016491oxidoreductase activity
GO:0050660flavin adenine dinucleotide binding
GO:0003824catalytic activity
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR036318FAD-bd_2-like_sf
IPR016164FAD-linked_Oxase-like_C
IPR016166FAD-bd_2
IPR006094Oxid_FAD_bind_N
IPR004113FAD-linked_oxidase_C
Homology
BLAST of NO16G02360 vs. NCBI_GenBank
Match: EWM23933.1 (d-lactate dehydrogenase [Nannochloropsis gaditana])

HSP 1 Score: 719.2 bits (1855), Expect = 1.100e-203
Identity = 351/464 (75.65%), Postives = 408/464 (87.93%), Query Frame = 0
Query:  117 IPLEFLAGLREIVGEANITDDADECAHHGKPWSSYHKIPSVPDVVVQPGSTEDVSRILRLCWAYRIPVVAYGGATSLEGHTLAPARGVSLDMNRMNKILRVSVEDLDATVQAGLGYLDLNESLAPQKICFPLDPGPGASIGGMCACRCSGSTAVKYGTMRDNVLNVTAVLADGTVLRTGTRARKSAAGYDLTRMLIGSEGTLGVITEVTLRLRRKPERSAALRVCFPSVRQAAAAANATLQAGVEVGRCELMDDDMIRIMNQMTGEKAMEATTLLYELVGTSETTVQEQVAQVQKVVGEHGGYGLETSENAAHAVQMWRARKEALWSTQAAYPDREVMITDVCVPLSNLADLIGQTKDEIQASFLPSPLVAHAGDGNFHAFITFHPDKQDEVAEAKRLSARMVEMALAMDGTCTGEHGVGMGKIKYLEAELGPGAIKTMGTIKRALDPHNLLNPGKILHQTMDP 581
            +P +F+  LR+IVG   ++ D++E A HGKPWSSYHKI  +PDV+VQP STE VSRI+RLCW YRIPVV YGGATSLEGHTLAP+RG+SLDMNRMN+ILRVS+EDLDATV+AGLGYLDLNE+L  Q   FPLDPGPGASIGGMCACRCSGSTAVKYGTMRD+VL+VTAVLADGTVL+TG+RARKSAAGYDLTR+LIGSEGTLG++TEVTLRLRRKP+RSAA+RVCFPSVR+AAAAA+ATLQAGVEVGRCELMDD M+RIMN+M G +  EATTLLYE+VG S+  V+ Q++ V+ V  +HGGYG+  S++ A AV MWRARKEALW+ QAAYPDREVMITDVCVPLS L DLIGQ+KD+I+AS LPSPLVAHAGDGNFHAFI F PD+ +EV EAK LSA MV+ ALA+DGTCTGEHG+G+GKIKYLE E G GA++TM  IKRALDP+NLLNPGK+L Q++ P
Sbjct:  128 LPYDFVVALRDIVGPEYVSQDSEERALHGKPWSSYHKITQIPDVIVQPASTEQVSRIMRLCWLYRIPVVPYGGATSLEGHTLAPSRGLSLDMNRMNRILRVSIEDLDATVEAGLGYLDLNEALRDQGAHFPLDPGPGASIGGMCACRCSGSTAVKYGTMRDSVLSVTAVLADGTVLKTGSRARKSAAGYDLTRLLIGSEGTLGIVTEVTLRLRRKPKRSAAIRVCFPSVREAAAAASATLQAGVEVGRCELMDDHMVRIMNEMNGLRDTEATTLLYEVVGISDVDVEGQMSLVEHVARKHGGYGILHSKDEADAVDMWRARKEALWAAQAAYPDREVMITDVCVPLSKLPDLIGQSKDKIRASSLPSPLVAHAGDGNFHAFIIFRPDRPEEVEEAKGLSAFMVKSALALDGTCTGEHGIGVGKIKYLEKEFGTGALQTMAAIKRALDPYNLLNPGKVLPQSLVP 591          
BLAST of NO16G02360 vs. NCBI_GenBank
Match: XP_024364182.1 (D-lactate dehydrogenase [cytochrome], mitochondrial-like [Physcomitrella patens] >PNR28003.1 hypothetical protein PHYPA_028595 [Physcomitrella patens])

HSP 1 Score: 506.1 bits (1302), Expect = 1.400e-139
Identity = 249/453 (54.97%), Postives = 327/453 (72.19%), Query Frame = 0
Query:  122 LAGLREIVGEANITDDADECAHHGKPWSSYHKIPSVPDVVVQPGSTEDVSRILRLCWAYRIPVVAYGGATSLEGHTLAPARGVSLDMNRMNKILRVSVEDLDATVQAGLGYLDLNESLAPQKICFPLDPGPGASIGGMCACRCSGSTAVKYGTMRDNVLNVTAVLADGTVLRTGTRARKSAAGYDLTRMLIGSEGTLGVITEVTLRLRRKPERSAALRVCFPSVRQAAAAANATLQAGVEVGRCELMDDDMIRIMNQMTGEKAMEATTLLYELVGTSETTVQEQVAQVQKVVGEHGGYGLETSENAAHAVQMWRARKEALWSTQAAYPDREVMITDVCVPLSNLADLIGQTKDEIQASFLPSPLVAHAGDGNFHAFITFHPDKQDEVAEAKRLSARMVEMALAMDGTCTGEHGVGMGKIKYLEAELGPGAIKTMGTIKRALDPHNLLNPGKIL 575
            LA LR  + E  +  D ++   H KPW++YH + ++PD+VV P S E+V  I++ C  Y+IPV  Y G TSLEGHT+   RGVS++MN M K+  + +ED+D  V+ G+G+++LNE L P  + FPLDPGPGA+IGGMCA RCSGS AV+YGTMRDNVL++ AV+A+G V++T  RARKSAAGYDLTR+LIGSEGTLGVITEVTLRL++ PE +      F +V  AAA A A++ +G++V R EL+DD M++ +N    +   E  TL++ELVGT E   QEQ A++Q++V +H G     ++      ++W+ RKEA WST    PD E ++TDVCVPLS LA+ I  TKD + AS LPS L+AHAGDGNFHA I F P  ++EV EA +LS  MV  +L+M+GTCTGEHGVG+GK+KYLE ELGP A+K MGTIK ALDP NL+NPGKI+
Sbjct:  122 LAELRAALDEDRVVVDEEDRKFHAKPWNTYHSVEAIPDIVVYPKSQEEVVAIIKACAKYKIPVTPYAGGTSLEGHTMTLNRGVSINMNSMKKVKELHLEDMDVIVEPGIGWIELNEYLKPYGLFFPLDPGPGATIGGMCATRCSGSMAVRYGTMRDNVLSMKAVVANGDVVKTAARARKSAAGYDLTRLLIGSEGTLGVITEVTLRLQKIPEATVVAMCNFKNVGDAAAVAIASMHSGIQVSRVELLDDVMMKAINMANDKNYPEKPTLMFELVGT-EAYTQEQTARIQRIVEDHNGSDFVFADTPIEKEELWKIRKEAFWSTFVLRPDAEALVTDVCVPLSRLAECISATKDSLLASSLPSTLLAHAGDGNFHAIILFDPKNKEEVDEALKLSNDMVHASLSMEGTCTGEHGVGIGKMKYLEKELGPEALKMMGTIKTALDPSNLMNPGKII 573          
BLAST of NO16G02360 vs. NCBI_GenBank
Match: XP_010263119.1 (PREDICTED: D-lactate dehydrogenase [cytochrome], mitochondrial isoform X2 [Nelumbo nucifera])

HSP 1 Score: 504.2 bits (1297), Expect = 5.400e-139
Identity = 247/458 (53.93%), Postives = 338/458 (73.80%), Query Frame = 0
Query:  117 IPLEFLAGLREIVGEANITDDADECAHHGKPWSSYHKIPSVPDVVVQPGSTEDVSRILRLCWAYRIPVVAYGGATSLEGHTLAPARGVSLDMNRMNKILRVSVEDLDATVQAGLGYLDLNESLAPQKICFPLDPGPGASIGGMCACRCSGSTAVKYGTMRDNVLNVTAVLADGTVLRTGTRARKSAAGYDLTRMLIGSEGTLGVITEVTLRLRRKPERSAALRVCFPSVRQAAAAANATLQAGVEVGRCELMDDDMIRIMNQMTGEKAMEATTLLYELVGTSETTVQEQVAQVQKVVGEHGGYGLETSENAAHAVQMWRARKEALWSTQAAYPDREVMITDVCVPLSNLADLIGQTKDEIQASFLPSPLVAHAGDGNFHAFITFHPDKQDEVAEAKRLSARMVEMALAMDGTCTGEHGVGMGKIKYLEAELGPGAIKTMGTIKRALDPHNLLNPGKIL 575
            +P E +  L+ I GE N+T D DE   HGKP +S+HK  ++PDVVV P S E+VS+I+  C  +++P+V YGGATS+EGHTL+P  GV +DM  M  +  + +ED+D  V+ G+G+++LNE L P  + FPLDPGPGA+IGGMCA RCSGS AV+YGTMRDNV+N+  +LA+G +++TG+RARKSAAGYDLTR++IGSEGTLGVITEVTLRL++ P+ S      FP+++ AA  A AT+ +G++V R EL+DD M++ +N   G+   E  TLL+E +GT E   +EQ + VQK+V EH G   + +E      ++W+ RKEALW+  A  P+ E MITDVCVPLS+LA+LI ++K+E+QAS L   ++AHAGDGNFH  I F P+K++E  EA+RL+  MV+ AL+M+GTCTGEHGVG GK+KYLE ELG   ++TM  IK  LDP+N++NPGK++
Sbjct:  109 VPQELIEELKAICGE-NLTLDYDERYFHGKPQNSFHKAVNIPDVVVFPRSEEEVSKIVISCNNHKVPIVPYGGATSIEGHTLSPNGGVCIDMTLMKTVKSLHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVILANGEIVKTGSRARKSAAGYDLTRLMIGSEGTLGVITEVTLRLQKIPQYSVVAMCNFPTIKDAADVAIATMLSGIQVSRVELLDDVMVKAINLANGKNLPEVPTLLFEFIGT-EAYAREQTSIVQKIVSEHNGSDFDFAEEPEAKKELWKIRKEALWACFAMKPNFEAMITDVCVPLSHLAELISKSKEELQASSLVCTVIAHAGDGNFHTLILFDPNKEEERQEAERLNQLMVQTALSMEGTCTGEHGVGTGKMKYLEKELGMENLRTMKRIKAVLDPNNIMNPGKLI 564          
BLAST of NO16G02360 vs. NCBI_GenBank
Match: PON82393.1 (Glycolate oxidase subunit [Trema orientalis])

HSP 1 Score: 503.4 bits (1295), Expect = 9.300e-139
Identity = 254/458 (55.46%), Postives = 336/458 (73.36%), Query Frame = 0
Query:  117 IPLEFLAGLREIVGEANITDDADECAHHGKPWSSYHKIPSVPDVVVQPGSTEDVSRILRLCWAYRIPVVAYGGATSLEGHTLAPARGVSLDMNRMNKILRVSVEDLDATVQAGLGYLDLNESLAPQKICFPLDPGPGASIGGMCACRCSGSTAVKYGTMRDNVLNVTAVLADGTVLRTGTRARKSAAGYDLTRMLIGSEGTLGVITEVTLRLRRKPERSAALRVCFPSVRQAAAAANATLQAGVEVGRCELMDDDMIRIMNQMTGEKAMEATTLLYELVGTSETTVQEQVAQVQKVVGEHGGYGLETSENAAHAVQMWRARKEALWSTQAAYPDREVMITDVCVPLSNLADLIGQTKDEIQASFLPSPLVAHAGDGNFHAFITFHPDKQDEVAEAKRLSARMVEMALAMDGTCTGEHGVGMGKIKYLEAELGPGAIKTMGTIKRALDPHNLLNPGKIL 575
            +P EF+  L+ I  + N+T D +E   HGKP +S+HK  ++PDVVV P S E+VS+I+RLC  +++P+V YGGATS+EGHTL+P  GV +DM+ M K+  + VED+D  V+ G+G+++LNE L P  + FPLDPGPGA+IGGMCA RCSGS AV+YGTMRDNV+++  VLA+G V++T +RARKSAAGYDLTR+LIGSEGTLGVITEVTLRL++ P+ S      FPS++ AA  A AT+ +G++V R EL+D+  IR +N   G+   E  TLL+E +GT E   +EQ   VQK+V EH G     +E+     ++W+ RKEALW+  A  P+ E M TDVCVPLS LA++I ++K EI AS L   +VAHAGDGNFH  I F PDK++E  EA+RL+  MV  ALAM+GTCTGEHGVG GK+KYLE ELG  A++TM  IK ALDP+N++NPGK++
Sbjct:  121 VPEEFIDELKAIC-QDNLTRDYEERYIHGKPQNSFHKAVNIPDVVVFPRSEEEVSKIVRLCDKHKVPIVPYGGATSIEGHTLSPNGGVCIDMSLMKKVKELHVEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDVVKTASRARKSAAGYDLTRLLIGSEGTLGVITEVTLRLQKIPQHSVVAMCNFPSIKDAADVAIATMLSGIQVSRVELLDEVQIRAINHANGKNLPETPTLLFEFIGT-EAYSREQTQIVQKIVSEHNGSDFVFAEDPEEKKELWKIRKEALWACFALKPNFEAMATDVCVPLSQLAEVISRSKQEIDASPLFCAVVAHAGDGNFHTVILFDPDKEEERQEAERLNHFMVHTALAMEGTCTGEHGVGTGKMKYLEKELGVEALQTMKRIKAALDPNNIMNPGKLI 576          
BLAST of NO16G02360 vs. NCBI_GenBank
Match: PON44931.1 (Glycolate oxidase subunit [Parasponia andersonii])

HSP 1 Score: 500.0 bits (1286), Expect = 1.000e-137
Identity = 253/455 (55.60%), Postives = 334/455 (73.41%), Query Frame = 0
Query:  120 EFLAGLREIVGEANITDDADECAHHGKPWSSYHKIPSVPDVVVQPGSTEDVSRILRLCWAYRIPVVAYGGATSLEGHTLAPARGVSLDMNRMNKILRVSVEDLDATVQAGLGYLDLNESLAPQKICFPLDPGPGASIGGMCACRCSGSTAVKYGTMRDNVLNVTAVLADGTVLRTGTRARKSAAGYDLTRMLIGSEGTLGVITEVTLRLRRKPERSAALRVCFPSVRQAAAAANATLQAGVEVGRCELMDDDMIRIMNQMTGEKAMEATTLLYELVGTSETTVQEQVAQVQKVVGEHGGYGLETSENAAHAVQMWRARKEALWSTQAAYPDREVMITDVCVPLSNLADLIGQTKDEIQASFLPSPLVAHAGDGNFHAFITFHPDKQDEVAEAKRLSARMVEMALAMDGTCTGEHGVGMGKIKYLEAELGPGAIKTMGTIKRALDPHNLLNPGKIL 575
            EF+  L+ I  + N+T D +E   HGKP +S+HK  +VPDVVV P S E+VS+I+RLC  +++P+V YGGATS+EGHTL+P  GV +DM+ M K+  + VED+D  V+ G+G+++LNE L P  + FPLDPGPGA+IGGMCA RCSGS AV+YGTMRDNV+++  VLA+G V++T +RARKSAAGYDLTR+LIGSEGTLGVITEVTLRL++ P+ S      FPS++ AA  A AT+ +G++V R EL+D+  I+ +N   G+   E  TLL+E +GT E   +EQ   VQK+V EH G     +E+     ++W+ RKEALW+  A  P+ E M TDVCVPLS LA++I ++K EI AS L   +VAHAGDGNFH  I F PDK++E  EA+RL+  MV  ALAM+GTCTGEHGVG GK+KYLE ELG  A++TM  IK ALDP+N++NPGK++
Sbjct:  122 EFIDELKAIC-QDNLTRDYEERYIHGKPQNSFHKAVNVPDVVVFPRSEEEVSKIVRLCDQHKVPIVPYGGATSIEGHTLSPNGGVCIDMSLMKKVKELHVEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDVVKTASRARKSAAGYDLTRLLIGSEGTLGVITEVTLRLQKIPQHSVVAMCNFPSIKDAADVAIATMLSGIQVSRVELLDEVQIKAINHANGKNLPETPTLLFEFIGT-EAYSREQTQIVQKIVSEHNGSDFVFAEDPEEKKELWKIRKEALWACFALKPNFEAMATDVCVPLSQLAEVISRSKQEIDASPLFCTVVAHAGDGNFHTVILFDPDKEEERREAERLNHFMVHTALAMEGTCTGEHGVGTGKMKYLEKELGVEALQTMKRIKAALDPNNIMNPGKLI 574          
BLAST of NO16G02360 vs. NCBI_GenBank
Match: XP_010263118.1 (PREDICTED: D-lactate dehydrogenase [cytochrome], mitochondrial isoform X1 [Nelumbo nucifera])

HSP 1 Score: 499.6 bits (1285), Expect = 1.300e-137
Identity = 247/459 (53.81%), Postives = 338/459 (73.64%), Query Frame = 0
Query:  117 IPLEFLAGLREIVGEANITDDADECAHHGKPWSSYHKIPSVPDVVVQPGSTEDVSRILRLCWAYR-IPVVAYGGATSLEGHTLAPARGVSLDMNRMNKILRVSVEDLDATVQAGLGYLDLNESLAPQKICFPLDPGPGASIGGMCACRCSGSTAVKYGTMRDNVLNVTAVLADGTVLRTGTRARKSAAGYDLTRMLIGSEGTLGVITEVTLRLRRKPERSAALRVCFPSVRQAAAAANATLQAGVEVGRCELMDDDMIRIMNQMTGEKAMEATTLLYELVGTSETTVQEQVAQVQKVVGEHGGYGLETSENAAHAVQMWRARKEALWSTQAAYPDREVMITDVCVPLSNLADLIGQTKDEIQASFLPSPLVAHAGDGNFHAFITFHPDKQDEVAEAKRLSARMVEMALAMDGTCTGEHGVGMGKIKYLEAELGPGAIKTMGTIKRALDPHNLLNPGKIL 575
            +P E +  L+ I GE N+T D DE   HGKP +S+HK  ++PDVVV P S E+VS+I+  C  ++ +P+V YGGATS+EGHTL+P  GV +DM  M  +  + +ED+D  V+ G+G+++LNE L P  + FPLDPGPGA+IGGMCA RCSGS AV+YGTMRDNV+N+  +LA+G +++TG+RARKSAAGYDLTR++IGSEGTLGVITEVTLRL++ P+ S      FP+++ AA  A AT+ +G++V R EL+DD M++ +N   G+   E  TLL+E +GT E   +EQ + VQK+V EH G   + +E      ++W+ RKEALW+  A  P+ E MITDVCVPLS+LA+LI ++K+E+QAS L   ++AHAGDGNFH  I F P+K++E  EA+RL+  MV+ AL+M+GTCTGEHGVG GK+KYLE ELG   ++TM  IK  LDP+N++NPGK++
Sbjct:  109 VPQELIEELKAICGE-NLTLDYDERYFHGKPQNSFHKAVNIPDVVVFPRSEEEVSKIVISCNNHKQVPIVPYGGATSIEGHTLSPNGGVCIDMTLMKTVKSLHIEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKVILANGEIVKTGSRARKSAAGYDLTRLMIGSEGTLGVITEVTLRLQKIPQYSVVAMCNFPTIKDAADVAIATMLSGIQVSRVELLDDVMVKAINLANGKNLPEVPTLLFEFIGT-EAYAREQTSIVQKIVSEHNGSDFDFAEEPEAKKELWKIRKEALWACFAMKPNFEAMITDVCVPLSHLAELISKSKEELQASSLVCTVIAHAGDGNFHTLILFDPNKEEERQEAERLNQLMVQTALSMEGTCTGEHGVGTGKMKYLEKELGMENLRTMKRIKAVLDPNNIMNPGKLI 565          
BLAST of NO16G02360 vs. NCBI_GenBank
Match: XP_020198989.1 (D-lactate dehydrogenase [cytochrome], mitochondrial-like isoform X1 [Aegilops tauschii subsp. tauschii])

HSP 1 Score: 499.6 bits (1285), Expect = 1.300e-137
Identity = 250/458 (54.59%), Postives = 329/458 (71.83%), Query Frame = 0
Query:  117 IPLEFLAGLREIVGEANITDDADECAHHGKPWSSYHKIPSVPDVVVQPGSTEDVSRILRLCWAYRIPVVAYGGATSLEGHTLAPARGVSLDMNRMNKILRVSVEDLDATVQAGLGYLDLNESLAPQKICFPLDPGPGASIGGMCACRCSGSTAVKYGTMRDNVLNVTAVLADGTVLRTGTRARKSAAGYDLTRMLIGSEGTLGVITEVTLRLRRKPERSAALRVCFPSVRQAAAAANATLQAGVEVGRCELMDDDMIRIMNQMTGEKAMEATTLLYELVGTSETTVQEQVAQVQKVVGEHGGYGLETSENAAHAVQMWRARKEALWSTQAAYPDREVMITDVCVPLSNLADLIGQTKDEIQASFLPSPLVAHAGDGNFHAFITFHPDKQDEVAEAKRLSARMVEMALAMDGTCTGEHGVGMGKIKYLEAELGPGAIKTMGTIKRALDPHNLLNPGKIL 575
            +P EF+  L   +G+ N+T D +E + HGKP SS+HK  +VPDVVV P S ++V +I+ +C  Y++P+V YGGATS+EGHTLAP  GV +DM+ M KI  + VED+D  V+ G+G+++LNE L P  + FPLDPGPGA+IGGMCA RCSGS AV+YGTMRDNV+N+  VL DG V++TG+RARKSAAGYDLTR++IGSEGTLGVITEVTLRL++ P RS      F +V+ AA  A AT+ +G++V R EL+D+  IR +N   G+   E  TL++E +GT E    EQ   VQK+  EH G      E      ++W+ RKEALW+  A  PDR+ MITDVCVPLS LA+ I  +K  + AS L   ++AHAGDGNFH FI F P +++E  EA+RL+  MV  AL+M+GTCTGEHGVG GK+KYLE ELG  +++TM  IK ALDP+N++NPGK++
Sbjct:   95 VPQEFMQELASFLGD-NLTVDYEERSFHGKPQSSFHKAVNVPDVVVFPKSQDEVRKIVMICNKYKVPIVPYGGATSIEGHTLAPHGGVCIDMSSMKKIKSLHVEDMDVVVEPGVGWIELNEYLKPHGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLQVVLPDGDVVKTGSRARKSAAGYDLTRLIIGSEGTLGVITEVTLRLQKLPSRSVVAMCNFQTVKDAADVAIATMHSGIQVSRVELLDEVQIRAINMANGKSLPEVPTLMFEFIGT-EAYALEQTLLVQKIAAEHHGSDFVFVEEPNAKEELWKIRKEALWAGFAMEPDRQAMITDVCVPLSRLAECISVSKQLLDASPLTCLVIAHAGDGNFHTFILFDPSQEEEQREAERLNHLMVHTALSMEGTCTGEHGVGTGKMKYLEKELGMESLRTMKRIKAALDPNNIMNPGKLI 550          
BLAST of NO16G02360 vs. NCBI_GenBank
Match: EOA20221.1 (hypothetical protein CARUB_v10000524mg, partial [Capsella rubella])

HSP 1 Score: 498.0 bits (1281), Expect = 3.900e-137
Identity = 249/458 (54.37%), Postives = 333/458 (72.71%), Query Frame = 0
Query:  117 IPLEFLAGLREIVGEANITDDADECAHHGKPWSSYHKIPSVPDVVVQPGSTEDVSRILRLCWAYRIPVVAYGGATSLEGHTLAPARGVSLDMNRMNKILRVSVEDLDATVQAGLGYLDLNESLAPQKICFPLDPGPGASIGGMCACRCSGSTAVKYGTMRDNVLNVTAVLADGTVLRTGTRARKSAAGYDLTRMLIGSEGTLGVITEVTLRLRRKPERSAALRVCFPSVRQAAAAANATLQAGVEVGRCELMDDDMIRIMNQMTGEKAMEATTLLYELVGTSETTVQEQVAQVQKVVGEHGGYGLETSENAAHAVQMWRARKEALWSTQAAYPDREVMITDVCVPLSNLADLIGQTKDEIQASFLPSPLVAHAGDGNFHAFITFHPDKQDEVAEAKRLSARMVEMALAMDGTCTGEHGVGMGKIKYLEAELGPGAIKTMGTIKRALDPHNLLNPGKIL 575
            +P E +  L+ I+ + N+T D DE   HGKP +S+HK  ++PDVVV P S E+VS+IL+ C  Y++P+V YGGATS+EGHTLAP  GV +DM+ M  +  + VED+D  V+ G+G+L+LNE L    + FPLDPGPGASIGGMCA RCSGS AV+YGTMRDNV+++  VL +G V++T +RARKSAAGYDLTR++IGSEGTLGVITEVTLRL++ P+ S      FP+V+ AA  A AT+ +G++V R EL+D+  IR +N   G+   EA TL++E +GT E   +EQ   VQ++  +H G     +E      ++W+ RKEALWS  A  P  E MITDVCVPLS+LA+LI ++K EI+AS L   ++AHAGDGNFHA I F P K+++  EA+RL+  MV  AL+MDGTCTGEHGVG GK+KYLE ELG  A++TM  IK+ LDP++++NPGK++
Sbjct:  136 VPKELITQLKTIL-QDNLTTDYDERYFHGKPQNSFHKAVNIPDVVVFPRSEEEVSKILKSCNEYKVPIVPYGGATSIEGHTLAPKGGVCIDMSLMKSVKALHVEDMDVVVEPGIGWLELNEYLEEYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVLPNGDVVKTASRARKSAAGYDLTRLMIGSEGTLGVITEVTLRLQKIPQHSVVAVCNFPTVKDAADVAIATMMSGIQVSRVELLDEVQIRAINMANGKNLNEAPTLMFEFIGT-EAYTREQTQIVQQIASKHNGSDFMFAEEPEAKKELWKIRKEALWSCYAMAPGHEAMITDVCVPLSHLAELISKSKKEIEASSLLCTVIAHAGDGNFHACIMFDPSKEEQRREAERLNHFMVHSALSMDGTCTGEHGVGTGKMKYLEKELGIEALQTMKKIKKTLDPNDIMNPGKLI 591          
BLAST of NO16G02360 vs. NCBI_GenBank
Match: XP_006287323.2 (D-lactate dehydrogenase [cytochrome], mitochondrial [Capsella rubella])

HSP 1 Score: 498.0 bits (1281), Expect = 3.900e-137
Identity = 249/458 (54.37%), Postives = 333/458 (72.71%), Query Frame = 0
Query:  117 IPLEFLAGLREIVGEANITDDADECAHHGKPWSSYHKIPSVPDVVVQPGSTEDVSRILRLCWAYRIPVVAYGGATSLEGHTLAPARGVSLDMNRMNKILRVSVEDLDATVQAGLGYLDLNESLAPQKICFPLDPGPGASIGGMCACRCSGSTAVKYGTMRDNVLNVTAVLADGTVLRTGTRARKSAAGYDLTRMLIGSEGTLGVITEVTLRLRRKPERSAALRVCFPSVRQAAAAANATLQAGVEVGRCELMDDDMIRIMNQMTGEKAMEATTLLYELVGTSETTVQEQVAQVQKVVGEHGGYGLETSENAAHAVQMWRARKEALWSTQAAYPDREVMITDVCVPLSNLADLIGQTKDEIQASFLPSPLVAHAGDGNFHAFITFHPDKQDEVAEAKRLSARMVEMALAMDGTCTGEHGVGMGKIKYLEAELGPGAIKTMGTIKRALDPHNLLNPGKIL 575
            +P E +  L+ I+ + N+T D DE   HGKP +S+HK  ++PDVVV P S E+VS+IL+ C  Y++P+V YGGATS+EGHTLAP  GV +DM+ M  +  + VED+D  V+ G+G+L+LNE L    + FPLDPGPGASIGGMCA RCSGS AV+YGTMRDNV+++  VL +G V++T +RARKSAAGYDLTR++IGSEGTLGVITEVTLRL++ P+ S      FP+V+ AA  A AT+ +G++V R EL+D+  IR +N   G+   EA TL++E +GT E   +EQ   VQ++  +H G     +E      ++W+ RKEALWS  A  P  E MITDVCVPLS+LA+LI ++K EI+AS L   ++AHAGDGNFHA I F P K+++  EA+RL+  MV  AL+MDGTCTGEHGVG GK+KYLE ELG  A++TM  IK+ LDP++++NPGK++
Sbjct:  106 VPKELITQLKTIL-QDNLTTDYDERYFHGKPQNSFHKAVNIPDVVVFPRSEEEVSKILKSCNEYKVPIVPYGGATSIEGHTLAPKGGVCIDMSLMKSVKALHVEDMDVVVEPGIGWLELNEYLEEYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVLPNGDVVKTASRARKSAAGYDLTRLMIGSEGTLGVITEVTLRLQKIPQHSVVAVCNFPTVKDAADVAIATMMSGIQVSRVELLDEVQIRAINMANGKNLNEAPTLMFEFIGT-EAYTREQTQIVQQIASKHNGSDFMFAEEPEAKKELWKIRKEALWSCYAMAPGHEAMITDVCVPLSHLAELISKSKKEIEASSLLCTVIAHAGDGNFHACIMFDPSKEEQRREAERLNHFMVHSALSMDGTCTGEHGVGTGKMKYLEKELGIEALQTMKKIKKTLDPNDIMNPGKLI 561          
BLAST of NO16G02360 vs. NCBI_GenBank
Match: XP_023005930.1 (D-lactate dehydrogenase [cytochrome], mitochondrial isoform X2 [Cucurbita maxima])

HSP 1 Score: 497.3 bits (1279), Expect = 6.600e-137
Identity = 247/442 (55.88%), Postives = 328/442 (74.21%), Query Frame = 0
Query:  133 NITDDADECAHHGKPWSSYHKIPSVPDVVVQPGSTEDVSRILRLCWAYRIPVVAYGGATSLEGHTLAPARGVSLDMNRMNKILRVSVEDLDATVQAGLGYLDLNESLAPQKICFPLDPGPGASIGGMCACRCSGSTAVKYGTMRDNVLNVTAVLADGTVLRTGTRARKSAAGYDLTRMLIGSEGTLGVITEVTLRLRRKPERSAALRVCFPSVRQAAAAANATLQAGVEVGRCELMDDDMIRIMNQMTGEKAMEATTLLYELVGTSETTVQEQVAQVQKVVGEHGGYGLETSENAAHAVQMWRARKEALWSTQAAYPDREVMITDVCVPLSNLADLIGQTKDEIQASFLPSPLVAHAGDGNFHAFITFHPDKQDEVAEAKRLSARMVEMALAMDGTCTGEHGVGMGKIKYLEAELGPGAIKTMGTIKRALDPHNLLNPGKIL 575
            N+T D DE   HGKP +S+H   ++PDVVV P S  +VS I++LC  Y++P+V YGGATS+EGHTLAP  G+ +DM+ MNK+  + VED+D  V+ G+G+++LNE L P  + FPLDPGPGA+IGGMCA RCSGS AV+YGTMRDNV+N+ AVLA+G V++T +RARKSAAGYDLTR++IGSEGTLGVITEVTLRL++ P+ S      FPS++ AA  A AT+ +G++V R EL+D+  IR +N   G+   EA TL++E +GT E   +EQ   VQK+V EH G     +E+     ++W+ RKEALW+  A  P+ E MITDVCVPLS+LA+LI  +K E+ AS L   ++AHAGDGNFH  I F P+K+++  EA+RL+  MV  AL+M+GTCTGEHGVG GK+KYLE ELG  A++TM  IK ALDP+N++NPGK++
Sbjct:  124 NMTLDYDERYFHGKPQNSFHAAVNIPDVVVFPRSEVEVSEIVKLCDQYKVPIVPYGGATSIEGHTLAPNGGLCIDMSLMNKVKALHVEDMDVIVEPGIGWMELNEYLEPYGLFFPLDPGPGATIGGMCATRCSGSLAVRYGTMRDNVINLKAVLANGDVVKTASRARKSAAGYDLTRLMIGSEGTLGVITEVTLRLQKLPKYSVVAMCNFPSIKDAADVAIATMLSGIQVSRMELLDEVQIRAINNANGKNLPEAPTLMFEFIGT-EAYSREQTQIVQKIVSEHNGSDFVFAEDPEAKKELWKIRKEALWACFALVPNFEAMITDVCVPLSHLAELISSSKQELDASSLVCTVIAHAGDGNFHTVILFDPNKEEQRKEAERLNHLMVYKALSMEGTCTGEHGVGTGKMKYLEKELGVEALRTMKRIKAALDPNNIMNPGKLI 564          
The following BLAST results are available for this feature:
BLAST of NO16G02360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23933.11.100e-20375.65d-lactate dehydrogenase [Nannochloropsis gaditana][more]
XP_024364182.11.400e-13954.97D-lactate dehydrogenase [cytochrome], mitochondria... [more]
XP_010263119.15.400e-13953.93PREDICTED: D-lactate dehydrogenase [cytochrome], m... [more]
PON82393.19.300e-13955.46Glycolate oxidase subunit [Trema orientalis][more]
PON44931.11.000e-13755.60Glycolate oxidase subunit [Parasponia andersonii][more]
XP_010263118.11.300e-13753.81PREDICTED: D-lactate dehydrogenase [cytochrome], m... [more]
XP_020198989.11.300e-13754.59D-lactate dehydrogenase [cytochrome], mitochondria... [more]
EOA20221.13.900e-13754.37hypothetical protein CARUB_v10000524mg, partial [C... [more]
XP_006287323.23.900e-13754.37D-lactate dehydrogenase [cytochrome], mitochondria... [more]
XP_023005930.16.600e-13755.88D-lactate dehydrogenase [cytochrome], mitochondria... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL153nonsL153Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR035ngnoR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003183NSK003183Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G02360.1NO16G02360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593847gene_6131Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100082g16gene6534Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G02360.1NO16G02360.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G02360 ID=NO16G02360|Name=NO16G02360|organism=Nannochloropsis oceanica|type=gene|length=2107bp
AGCCTCTACGCCCCGCACTTTGACAAAGGCTCCAGCAACCGATTGACGAT
CACACCTTCCACCGAGCAGCACAACCACCACCAGCAGCGCCCACGCCACA
TTCCCAATGTCCCGCACAGAGGTGGCGCGGGGGTTATCCTTGACGGCTTC
CCGGCTGTCAATGTTGCAGAGGTGGTCACCATTTCACTCTCCGCGGGTTT
TATTGTCGACCTCCCGGCTCCCTCAGCAGCACCAACACCGGCATGCTCAC
CCTCCCAAGCCCTCGATCTCTTCATACGGCATCGCAGCAGTGGCGGCTGC
CGCATCCTCCATGGCTCTAGCTATGCAACCCGATAATGATGGTAGCAGCA
GCAGGCTGACAGCATGCCATGCATCGTCCCCGCAAGAAACTTCGGCGAAG
GAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCACCGCAAAAAGC
AGGCATCCCGCTCGAATTTCTGGCGGGGCTTCGAGAGATAGTGGGCGAAG
CAAATATCACGGACGATGCTGATGAATGCGCGCATCACGGCAAGCCATGG
AGTTCGTATCACAAGATCCCCTCTGTACCGGACGTAGTGGTGCAGCCGGG
CTCCACCGAAGACGTCTCGCGCATCTTGCGGCTATGTTGgtacgtgacaa
gtgattgtgagggatgtagattagtctggaggaaagacacatagattttt
ttttttactttgtctcacatctctaactctttcaccccacttaaccacat
cacaaatcagGGCATACCGCATCCCTGTCGTTGCCTACGGGGGCGCCACC
TCCCTAGAAGGCCACACATTGGCGCCGGCTAGGGGCGTGTCGCTGGATAT
GAATCGAATGAACAAAATCTTGAGGGTGTCAGTCGAAGACTTAGATGCCA
CTGTGCAGGCAGGTTTGGGCTACCTCGATCTCAATGAATCTCTGGCGCCA
CAGAAGATTTGCTTCCCCTTAGATCCAGGGCCTGGGGCGTCTATTGGCGG
CATGTGTGCTTGCCGCTGCTCGGGCTCGACGGCAGTGAAATACGGGACCA
TGCGCGACAACGTCTTGAATGTCACAGCAGTCCTCGCCGACGGCACCGTC
TTGCGCACCGGCACCCGAGCACGCAAATCTGCAGCAGGCTACGACTTGAC
ACGGATGCTGATTGGAAGCGAGGGCACCTTAGGTGTCATAACTGAAGTGA
CTTTGCGTCTGCGTCGTAAGCCGGAGCGATCTGCGGCCCTTCGCGTGTGC
TTCCCATCCGTGCGGCAAGCGGCAGCAGCTGCCAATGCCACGCTCCAGGC
TGGGGTGGAGGTGGGGAGGTGTGAGTTGATGGATGATGATATGATCCGCA
TTATGAATCAGATGACGGGCGAGAAGGCTATGGAAGCCACGACGTTGCTG
TATGAATTGGTAGGTACATCCGAGACGACGGTACAGGAGCAGGTAGCGCA
GGTGCAGAAGGTCGTGGGGGAGCATGGAGGGTATGGACTCGAGACATCTG
AGAATGCGGCTCACGCAGTACAAATGTGGCGGGCCCGAAAGGAGGCCCTC
TGGTCGACGCAGGCGGCGTACCCGGACAGAGAGGTAATGATTACTGATGT
CTGCGTACCTTTGTCTAATCTGGCAGATTTAATCGGGCAGACCAAGGACG
AGATTCAGGCCTCGTTTTTGCCCTCTCCTTTGGTGGCTCATGCGGGGGAC
GGAAATTTCCATGCATTTATAACCTTTCATCCTGACAAGCAGGATGAAGT
GGCGGAGGCCAAGCGACTGAGTGCGCGGATGGTGGAGATGGCCTTGGCAA
TGGATGGGACATGCACGGGCGAGCATGGCGTGGGGATGGGGAAAATCAAG
TATCTGGAGGCGGAGCTCGGGCCTGGTGCTATCAAAACCATGGGGACGAT
CAAGCGCGCCCTGGATCCGCATAACCTTTTAAATCCGGGGAAGATATTAC
ATCAGACCATGGACCCCAGGACGGGGCGTTTCCATTTGTGTGTATGAGTC
GGAAAGTGATAGTTGAGCCATGAGAAATGGTTTGAGAGAACAGGAACAAA
CGAGGGGAACAAACGAGACGCACGTATACATCACGAAACGGTGATCTACT
CTCGGGA
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protein sequence of NO16G02360.1

>NO16G02360.1-protein ID=NO16G02360.1-protein|Name=NO16G02360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=590bp
MSRTEVARGLSLTASRLSMLQRWSPFHSPRVLLSTSRLPQQHQHRHAHPP
KPSISSYGIAAVAAAASSMALAMQPDNDGSSSRLTACHASSPQETSAKEQ
QQQQQQQQQQPPQKAGIPLEFLAGLREIVGEANITDDADECAHHGKPWSS
YHKIPSVPDVVVQPGSTEDVSRILRLCWAYRIPVVAYGGATSLEGHTLAP
ARGVSLDMNRMNKILRVSVEDLDATVQAGLGYLDLNESLAPQKICFPLDP
GPGASIGGMCACRCSGSTAVKYGTMRDNVLNVTAVLADGTVLRTGTRARK
SAAGYDLTRMLIGSEGTLGVITEVTLRLRRKPERSAALRVCFPSVRQAAA
AANATLQAGVEVGRCELMDDDMIRIMNQMTGEKAMEATTLLYELVGTSET
TVQEQVAQVQKVVGEHGGYGLETSENAAHAVQMWRARKEALWSTQAAYPD
REVMITDVCVPLSNLADLIGQTKDEIQASFLPSPLVAHAGDGNFHAFITF
HPDKQDEVAEAKRLSARMVEMALAMDGTCTGEHGVGMGKIKYLEAELGPG
AIKTMGTIKRALDPHNLLNPGKILHQTMDPRTGRFHLCV*
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Synonyms
Publications