NO16G02330, NO16G02330 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G02330 vs. NCBI_GenBank
Match: EWM23939.1 (transcription initiation factor tfiid subunit [Nannochloropsis gaditana]) HSP 1 Score: 475.3 bits (1222), Expect = 2.200e-130 Identity = 345/484 (71.28%), Postives = 376/484 (77.69%), Query Frame = 0 Query: 6 MSGHYVQQAQAFVLRLPEHLEESVRARLKTGGMDGVQLTARPDGFEGLPEYAVQRGGLLELRL-GARKATEDAPDGGEYDDEEEEHEPRVFPARLVNLPCVVEMHKTVDYVTLFKSGDVGQMVVVYANETELLEDLRREEEERDKIRQKGGRDGQADAELRVRQQLNYYHSGLTPPTTNIVRRRFAETRLHGPYPPAVVAKVQRELAAHVAALEEKREVAEVVEDVVEFEDYMADMHGQPVTIAEDSAQWLEHPELLIHRPVVLAPDDPAFFSVXXXXXXXXXXXXXXXXXNDGAHLVEAAALQQATSVMAGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGPVGGNEDIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPREREKDSRNLGGQRVGGRVITGNVPAPDLPPDPDFDNAFLGEDGEDDFLDFLEGGVGEEGGLMDEGLLD 489 MSGHY Q QAFVLRLPEHLEE +RARL+ G MDGVQLTARPDG EGLP+YA +RGGLLELRL G R+A+E+ DDE E RVFPARLVNLPCVVE+HKTVDYVTLFKS DVGQMVVVY +E +LED+ REEEER K+R+KGG+D + AEL +R QL+YYHSGLTPPTTNIVRRRFAETR+HGPYP A VAKVQ ELAAHVAALEEKREV+EVVEDVV+FEDYMADMHGQPVTIAEDSA WLEHPELLIHRPVVLAPDDPA D A+ + A +Q+ ++ K XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX G E XXXXXXXXXXXXXXXXXXXX P K+SR GGQRVGG VITGN+PAPD+PPDP+FDNAFLGEDGEDDFLDFLEGGV EEGGLMDEG L+ Sbjct: 1 MSGHYAQ--QAFVLRLPEHLEEIIRARLRAGNMDGVQLTARPDGSEGLPKYAAKRGGLLELRLGGGRRASEEDLYSDGKDDESE--RARVFPARLVNLPCVVEVHKTVDYVTLFKSADVGQMVVVYKDEAAMLEDMLREEEERGKMREKGGKDDEGKAELSLRAQLDYYHSGLTPPTTNIVRRRFAETRMHGPYPAATVAKVQGELAAHVAALEEKREVSEVVEDVVDFEDYMADMHGQPVTIAEDSALWLEHPELLIHRPVVLAPDDPAL-----GPAASALPAAPKPFPADAAY--DPAFIQEGSTAPTSKGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSSLPPVAISGCPEGASAPLIMLEPPAGXXXXXXXXXXXXXXXXXXXXXP----KESRITGGQRVGGPVITGNLPAPDVPPDPEFDNAFLGEDGEDDFLDFLEGGVEEEGGLMDEGFLE 469
BLAST of NO16G02330 vs. NCBI_GenBank
Match: GAX16071.1 (hypothetical protein FisN_20Hh253 [Fistulifera solaris]) HSP 1 Score: 94.0 bits (232), Expect = 1.400e-15 Identity = 70/195 (35.90%), Postives = 93/195 (47.69%), Query Frame = 0 Query: 95 FPARLVNLPCVVEMHKTVDYVTLFKSGDVGQMVVVYANETELLEDLRREEEERDKIRQKGGRDGQADAELRVRQQLNYYHSGLTPPTTNIVRRRFAETRLHGPYPPAVVA-------------------KVQRELAAHVAALEEKREV-AEVVEDVVEFEDYMADMHGQPVTIAEDSAQWL--EHPELLIHRPVV 268 +PA+LVNLPC VE+HKT D+ KS D+ QM++VY ++ L E AE + + NYYHSGLTPPT IV RRFA R H PP A K +R A V L +V EV E+VV++E +M+D QP+ I D+ L HPE+ + V+ Sbjct: 77 YPAKLVNLPCPVELHKTHDHAIYIKSVDIAQMLIVYEDDMALEE-----------------------AEEKPPEGFNYYHSGLTPPTRRIVERRFA-AREHKAMPPPRSASAYVETELLELMEKLARDDKGKRNKATKVPTLTSATKVLEEVEEEVVDYEPWMSDFGKQPLGIEFDTDSQLCSLHPEIWLKPSVI 247
BLAST of NO16G02330 vs. NCBI_GenBank
Match: GAX28932.1 (hypothetical protein FisN_20Lh253 [Fistulifera solaris]) HSP 1 Score: 92.0 bits (227), Expect = 5.300e-15 Identity = 69/195 (35.38%), Postives = 91/195 (46.67%), Query Frame = 0 Query: 95 FPARLVNLPCVVEMHKTVDYVTLFKSGDVGQMVVVYANETELLEDLRREEEERDKIRQKGGRDGQADAELRVRQQLNYYHSGLTPPTTNIVRRRFAETRLHGPYPPAVVA-------------------KVQRELAAHVAALEEKREV-AEVVEDVVEFEDYMADMHGQP--VTIAEDSAQWLEHPELLIHRPVV 268 +PA+LVNLPC VE+HKT D+ KS D+ QM++VY ++ L E AE + + NYYHSGLTPPT IV RRFA R H PP A K +R A V L +V EV E+VV++E +M+D QP + DS HPE+ + V+ Sbjct: 77 YPAKLVNLPCPVELHKTHDHAIYIKSVDIAQMLIVYEDDMALEE-----------------------AEEKPPEGFNYYHSGLTPPTRRIVERRFA-AREHKAMPPPRSASAYVETELLELMEKLTRDDKGKRNKATKVPTLTSATKVLEEVEEEVVDYEPWMSDYGKQPHGIEFDTDSQLCSLHPEIWLKPSVI 247
BLAST of NO16G02330 vs. NCBI_GenBank
Match: CBJ48757.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 87.4 bits (215), Expect = 1.300e-13 Identity = 72/195 (36.92%), Postives = 96/195 (49.23%), Query Frame = 0 Query: 18 VLRLPEHLEESVRARLKTG-GMDGVQLTARPDGFEGLPEYAVQRGGLLELRLGARKATEDAPDGGEYDDEEEEHEPRVFPARLVNLPCVVEMHKTVDYVTLFKSGDVGQMVVVYANETELLEDLRREEEERDKIRQKGGRDGQADAELRVRQQLNYYHSGLTPPTTNIVRRRFAETRL-HGPYPPAVVAKVQREL 211 VLRLP+ L+E++R R+ GM+GV T PE + G+R+ T DG +Y PARLV++PCV+E KT+D T FKSGDVGQM++VY +E +D DG A V Q Y GLTPPT NIVRRRF + R G + A V +V+ ++ Sbjct: 9 VLRLPDGLKEAMRERVAADTGMEGVDFT---------PE-----------KKGSRRFT-FTMDGKKY------------PARLVDMPCVLETQKTLDKRTFFKSGDVGQMLIVYKDENAYKKD-----------------DGNASG---VGPQ-RLYPDGLTPPTKNIVRRRFVKARPDRGKFDRAEVIRVESQV 149
BLAST of NO16G02330 vs. NCBI_GenBank
Match: XP_002180202.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48393.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 87.4 bits (215), Expect = 1.300e-13 Identity = 65/196 (33.16%), Postives = 96/196 (48.98%), Query Frame = 0 Query: 95 FPARLVNLPCVVEMHKTVDYVTLFKSGDVGQMVVVYANETELLEDLRREEEERDKIRQKGGRDGQADAELRVRQQLNYYHSGLTPPTTNIVRRRFAETRLHGPYPP-AVVAKVQRELAAHVAAL--EEKRE-------------VAEVVEDVVEFEDYMADMHGQPVTIAEDSAQWL--EHPELLIHRPVVLAPDD 273 +PA+LVNLPC VE+HKT D+ FK D+ QM++VY +D+ EE E E + +Y+HSGLTPP +V RRFA PP A V V+ EL + + +EK + + EVVE+VV++E +M D P + D++ L +HPE+ + ++ A D Sbjct: 75 YPAKLVNLPCPVELHKTHDHAAYFKCSDIAQMLIVYE------DDMALEEAE----------------EKAIEGFPSYHHSGLTPPMKRVVERRFAAREQKAVAPPRAAVVDVEDELLQLMDKISKDEKTKRNKLPSLTSASKILEEVVEEVVDYETWMDDYGRDPDGVEFDASDHLCSQHPEVWLSPDLIRAIKD 248
BLAST of NO16G02330 vs. NCBI_GenBank
Match: EJK69213.1 (hypothetical protein THAOC_09548 [Thalassiosira oceanica]) HSP 1 Score: 84.7 bits (208), Expect = 8.500e-13 Identity = 54/130 (41.54%), Postives = 74/130 (56.92%), Query Frame = 0 Query: 95 FPARLVNLPCVVEMHKTVDYVTLFKSGDVGQMVVVYANETELLEDLRREEEERDKIRQKGGRDGQADAELRVRQQLNYYHSGLTPPTTNIVRRRFA---ETRLHGPYPP--AVVAKVQRELAAHVAALEE 220 +PARLVNLPC VE+HKT+D+ K+ DVGQM++VY +E + EE E DK E +V +Y+HSGLTPP +V+RRF E R P PP + V++V+ EL +A L + Sbjct: 91 YPARLVNLPCPVEVHKTLDHANYHKASDVGQMLIVYEDEYSM------EEAENDK-------------EYKVEGFPSYFHSGLTPPMRRVVQRRFLSRFEERDTKPVPPPRSEVSQVETELQELIAKLSK 201
BLAST of NO16G02330 vs. NCBI_GenBank
Match: XP_002292658.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED89854.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 84.0 bits (206), Expect = 1.500e-12 Identity = 53/132 (40.15%), Postives = 74/132 (56.06%), Query Frame = 0 Query: 95 FPARLVNLPCVVEMHKTVDYVTLFKSGDVGQMVVVYANETELLEDLRREEEERDKIRQKGGRDGQADAELRVRQQLNYYHSGLTPPTTNIVRRRFA---ETRLHGPYPP--AVVAKVQRELAAHVAALEEKR 222 +PARLVNLPC VE+HKT D+ T KS DVGQM++VY +E + EE E +K ++ L+YYHSG+TPP +VRRRF E R P PP + V +V++E+ + L ++ Sbjct: 92 YPARLVNLPCPVEVHKTHDHATYHKSADVGQMLIVYEDEYAM------EEAENEK-------------GYKIEGFLSYYHSGITPPMKRVVRRRFLSRFEERDVKPVPPYRSEVTEVEKEIQNLITKLSGEK 204
BLAST of NO16G02330 vs. NCBI_GenBank
Match: CCA14354.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 83.6 bits (205), Expect = 1.900e-12 Identity = 62/248 (25.00%), Postives = 112/248 (45.16%), Query Frame = 0 Query: 15 QAFVLRLPEHLEESVRARLKTGGMDGVQLTARPDGFEGLPEYAVQRGGLLELRLGARKATEDAPDGGEYDDEEEEHEPRVFPARLVNLPCVVEMHKTVDYVTLFKSGDVGQMVVVYANETELLEDLRREEEERDKIRQKGGRDGQADAELRVRQQLNYYHSGLTPPTTNIVRRRFAETRLHGPYPPAVVAKVQRELAAHVAALEEKREVAEVVEDVVEFEDYMAD-MHGQPVTIAEDSAQWLEHPELL 262 + ++L++P++L +RA + G + +QL ++ D + G EY A++ LPCV+E HKT D +KSG++GQM +V E++D E V + +N ++G+TPP TN+V+R++ +T+ + P+P VA+V+ +L + + E+ E++VEF D+M D H + + ++ +HPE L Sbjct: 2 EQYLLQVPKNLAGEIRAHIGNGAAEKIQLVSKAD----------------------NRHFTFILSGKEY------------YAKIAQLPCVLETHKTYDENFFYKSGEIGQMFIVC--------------EKQD--------------EKEVAETINEINNGITPPNTNVVKRKYDKTKHYAPFPKPDVARVEEDL----IKILQGGPFEEIEEELVEFHDWMVDEEHPNGIILTDEMELIRQHPEYL 183
BLAST of NO16G02330 vs. NCBI_GenBank
Match: XP_009534480.1 (hypothetical protein PHYSODRAFT_564209 [Phytophthora sojae] >EGZ09619.1 hypothetical protein PHYSODRAFT_564209 [Phytophthora sojae]) HSP 1 Score: 82.8 bits (203), Expect = 3.200e-12 Identity = 50/168 (29.76%), Postives = 87/168 (51.79%), Query Frame = 0 Query: 95 FPARLVNLPCVVEMHKTVDYVTLFKSGDVGQMVVVYANETELLEDLRREEEERDKIRQKGGRDGQADAELRVRQQLNYYHSGLTPPTTNIVRRRFAETRLHGPYPPAVVAKVQRELAAHVAALEEKREVAEVVEDVVEFEDYMA-DMHGQPVTIAEDSAQWLEHPELL 262 +PA++ LPC++E HKT D +KSG++GQ+ VV DK D E ++ + +G+TPP TN+++R++ +T+ P+P VA+V+ +L +A + +V E++V+F ++MA D H +T+ ++ EHPE L Sbjct: 48 YPAKIAQLPCILETHKTYDDNFFYKSGEIGQIFVV-----------------TDK-----------DEERKLLETQEEVTNGITPPNTNVIKRKYEKTKKTTPFPKGDVARVEEDLVKIIAG----GAIEDVHEELVDFYEWMADDEHPNGITVTDEMELIREHPEYL 183
BLAST of NO16G02330 vs. NCBI_GenBank
Match: OWZ21966.1 (hypothetical protein PHMEG_0003388 [Phytophthora megakarya]) HSP 1 Score: 82.4 bits (202), Expect = 4.200e-12 Identity = 52/168 (30.95%), Postives = 88/168 (52.38%), Query Frame = 0 Query: 95 FPARLVNLPCVVEMHKTVDYVTLFKSGDVGQMVVVYANETELLEDLRREEEERDKIRQKGGRDGQADAELRVRQQLNYYHSGLTPPTTNIVRRRFAETRLHGPYPPAVVAKVQRELAAHVAALEEKREVAEVVEDVVEFEDYMAD-MHGQPVTIAEDSAQWLEHPELL 262 +PAR+ LP ++E HKT D +KSG++GQ+ VV E E ++ E +D++ +GLTPP TN+++R++ +T+ P+P VA+V+ +L V + + +V E++V+F D+MAD H +T+ ++ EHPE L Sbjct: 48 YPARIAQLPTILETHKTYDDNFFYKSGEIGQIFVVTDKEEE-----KKLLESQDEV-----------------------PNGLTPPNTNVIKRKYEKTKKTTPFPKPDVARVEEDL---VKIINANGAIEDVHEELVDFYDWMADEEHPNGITVTDEMELIREHPEYL 184 The following BLAST results are available for this feature:
BLAST of NO16G02330 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G02330 ID=NO16G02330|Name=NO16G02330|organism=Nannochloropsis oceanica|type=gene|length=2363bpback to top protein sequence of NO16G02330.1 >NO16G02330.1-protein ID=NO16G02330.1-protein|Name=NO16G02330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=489bpback to top Synonyms
Publications
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