NO16G02290, NO16G02290 (gene) Nannochloropsis oceanica

Overview
NameNO16G02290
Unique NameNO16G02290
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1543
Alignment locationchr16:664974..666516 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:664974..666516 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010699DUF1275
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO16G02290 vs. NCBI_GenBank
Match: EWM23918.1 (Protein of unknown function DUF1275 [Nannochloropsis gaditana])

HSP 1 Score: 427.2 bits (1097), Expect = 5.800e-116
Identity = 228/359 (63.51%), Postives = 272/359 (75.77%), Query Frame = 0
Query:   49 QSQAQPRNIG-VPSPSSRASPTAKLQRQKSGDISASRAAPMNPGERPYFKIILFSSFVLTINASFINLITLHSAKAMASVHVTGMIAHISNFAATRDLAPLYEYIGTYLCFVAGSFTAGVVVTQETFYMGRNYGRALFLIAAVEAAALLTEAAYPDTIFFIWLCAYSAGLQNGLTSKFSGNAVRTTHLTGASTDFGIAIGHIIKGRKGEWWKVKLHGIAVVGFFIGGIAGFFAFEHFGHNALLFNMGMTTSLAIAHTFYIAYHERLSPIFVLESSRDIIMHKHRVANNLDLGRQSSFNPGPSPSASSLAELTPTSRAKRLAGARASSCVSMLPPASMASRLERHFPKNEPGENVDDYKA 407
            + Q  P NI  VP P+S+ +P   LQRQKS        +  NPGERPYFK+IL +SFVLTINA+FIN+ITL++ +AMAS HVTG++A  S  AAT  +  LY+Y  T+  FVAGS T+GV+V QETFY+GRNYGRALFLIAAVE  ALLTE +YPD+IFFIWLCAY+ GLQNGLTSKFSGNAVRTTHLTGASTD GIA+GHI+KGR+GEWWKVKLHG+AV+GFF+GGI GFF +  F H+ALLFN+G+TT+LA+AHT YIAYHE +SPI VLES  DI MHK R+    D  RQ SF   PSPS S+L  LT  +R K LA AR +S   +  PAS A   +RHFPKN  GE+ DD+ A
Sbjct:   59 EPQNPPSNINDVPCPASKVNPPQGLQRQKS--------SYKNPGERPYFKVILTASFVLTINAAFINIITLNTVQAMASAHVTGLVARASYLAATGRMDVLYQYALTWASFVAGSCTSGVIVAQETFYLGRNYGRALFLIAAVEGIALLTEDSYPDSIFFIWLCAYACGLQNGLTSKFSGNAVRTTHLTGASTDLGIAMGHILKGRQGEWWKVKLHGVAVLGFFVGGILGFFTYRRFRHSALLFNIGITTTLAVAHTLYIAYHEGISPITVLESKTDIRMHKRRIVVAGDGKRQFSFYARPSPSGSALEALTLRTREKHLAAARPTSGKVVASPASTARHQKRHFPKNRAGEDADDHVA 409          
BLAST of NO16G02290 vs. NCBI_GenBank
Match: EWM24629.1 (hypothetical protein Naga_100117g18 [Nannochloropsis gaditana])

HSP 1 Score: 207.6 bits (527), Expect = 7.300e-50
Identity = 130/334 (38.92%), Postives = 194/334 (58.08%), Query Frame = 0
Query:   48 RQSQAQPRNI-GVPSPSSRASPT--AKLQRQKSGDISASRAAPMNPGERPYFKIILFSSFVLTINASFINLITLHSAKAMASVHVTGMIAHISNFAATRDLAPLYEYIGTYLCFVAGSFTAGVVVTQETFYMGRNYGRALFLIAAVEAAALLTEAAYPD----TIFFIWLCAYSAGLQNGLTSKFSGNAVRTTHLTGASTDFGIAIGHIIKGRKGEWWKVKLHGIAVVGFFIGGIAGFFAFEHFGHNALLFNMGMTTSLAIAHTFYIAYHERLSPIFVLESSRDIIMHKHRVANNLDLGRQSSFNPGPSPSASSLAELTPTSRAKRLAGARASS 375
            RQ   Q RN+  + +  S  SP   A ++R +   + + RA      +R  F I+LF SF L  NASF+NL+T  S   +A+ HVTG++A  S   A      +Y  I  +LCF+ GS   G  V+ ETFY+GR+YGRAL  IA ++ +AL+    + D      ++I++CA + GLQN LTSK+SGN +RTTH+TGA+TD GIAIGH++KGR+G+ WKVKLH  A++GF +GG+ G  A+  F   ALLFN+ + T L ++H  +I+  + LS   V +S+ D           L +    +  P P+ + +S AE+   +     +G + +S
Sbjct:   18 RQDSKQARNLESLRTSGSILSPVKPASIRRLR---LVSKRAIQ----DRDDFHILLFGSFCLCFNASFVNLVTFSSYLKLATAHVTGLVARASQTIADGAWQLVYLPISVFLCFLVGSVVGGYTVSHETFYLGRSYGRALLTIALLQGSALVVNKVHVDEGHVQHYYIYVCAVAMGLQNSLTSKYSGNTLRTTHVTGATTDLGIAIGHLLKGRRGDLWKVKLHSTAILGFLVGGVMGRLAYLRFEETALLFNVTIMTVLGLSHLLWISRRKGLSLWKVFKSTTD-----------LKVDMAPAHEPSPNETPTSPAEMREPTSHLASSGTKGTS 333          
BLAST of NO16G02290 vs. NCBI_GenBank
Match: EWM24177.1 (Protein of unknown function DUF1275 [Nannochloropsis gaditana])

HSP 1 Score: 128.6 bits (322), Expect = 4.300e-26
Identity = 62/131 (47.33%), Postives = 89/131 (67.94%), Query Frame = 0
Query:   99 ILFSSFVLTINASFINLITLHSAKAMASVHVTGMIAHISNFAATRDLAPLYEYIGTYLCFVAGSFTAGVVVTQETFYMGRNYGRALFLIAAVEAAALLTEAAYPDTIFFIWLCAYSAGLQNGLTSKFSGNA 230
            +LF S  LTINA +IN ITLH+   + S HVTG++A  SN  A  D + +  Y+  Y CFV+G+   G++++ ETFY+GRNY RALFL AA++  AL+ E+ +  +++FI+ C  + GLQN LTSK+ G A
Sbjct:  186 VLFGSLTLTINAGYINSITLHNLHGIPSAHVTGIVARASNLFAEADWSRMSLYVVAYCCFVSGACMGGLLISHETFYLGRNYARALFLTAAIQGVALVIESHWDHSVYFIYACCLAMGLQNSLTSKYRGGA 316          
BLAST of NO16G02290 vs. NCBI_GenBank
Match: AER54957.1 (hypothetical protein DSC_01520 [Pseudoxanthomonas spadix BD-a59])

HSP 1 Score: 114.8 bits (286), Expect = 6.400e-22
Identity = 72/208 (34.62%), Postives = 113/208 (54.33%), Query Frame = 0
Query:  103 SFVLTINASFINLITLHSAKAMASVHVTGMIAHISNFAATRDLAPLYEYIGTYLCFVAGSFTAGVVVTQETFYMGRNYGRALFLIAAVEAAALLTEAAYP----DTIFFIWLCAYSAGLQNGLTSKFSGNAVRTTHLTGASTDFGIAIGHIIKGRKGEWWKVKLHGIAVVGFFIGGIAGFFAFEHFGHNALLFNMGMTTSLAIAHTFY 307
            ++VL   A  +N++ L   +  A  H+TG  + +    A  DLA +  +      FVAGS  +G ++   T  +GR YG AL L+      +LL  A+ P    ++ + ++  A + GLQN + S +SG  VRTTH++G  TD GI +GH ++G   +  ++ L  + + GF  GGI G FAF  FG+ AL F  G+T  +AI++  Y
Sbjct:    5 AWVLAAIAGMVNVVGLLGFEHQAISHLTGNTSLLGEALAAHDLAGVLHFALLIGAFVAGSTLSGFLIQDSTLQLGRRYGVALLLV------SLLLFASVPLLQLNSAYGMYAAACACGLQNAMVSTYSGAVVRTTHVSGMFTDLGIFLGHALRGLPVDIRRLTLCLLVISGFLCGGILGTFAFHAFGYRALFFPAGLTAVVAISYGVY 206          
BLAST of NO16G02290 vs. NCBI_GenBank
Match: WP_043290251.1 (DUF1275 domain-containing protein [Pseudoxanthomonas spadix])

HSP 1 Score: 114.8 bits (286), Expect = 6.400e-22
Identity = 72/208 (34.62%), Postives = 113/208 (54.33%), Query Frame = 0
Query:  103 SFVLTINASFINLITLHSAKAMASVHVTGMIAHISNFAATRDLAPLYEYIGTYLCFVAGSFTAGVVVTQETFYMGRNYGRALFLIAAVEAAALLTEAAYP----DTIFFIWLCAYSAGLQNGLTSKFSGNAVRTTHLTGASTDFGIAIGHIIKGRKGEWWKVKLHGIAVVGFFIGGIAGFFAFEHFGHNALLFNMGMTTSLAIAHTFY 307
            ++VL   A  +N++ L   +  A  H+TG  + +    A  DLA +  +      FVAGS  +G ++   T  +GR YG AL L+      +LL  A+ P    ++ + ++  A + GLQN + S +SG  VRTTH++G  TD GI +GH ++G   +  ++ L  + + GF  GGI G FAF  FG+ AL F  G+T  +AI++  Y
Sbjct:   13 AWVLAAIAGMVNVVGLLGFEHQAISHLTGNTSLLGEALAAHDLAGVLHFALLIGAFVAGSTLSGFLIQDSTLQLGRRYGVALLLV------SLLLFASVPLLQLNSAYGMYAAACACGLQNAMVSTYSGAVVRTTHVSGMFTDLGIFLGHALRGLPVDIRRLTLCLLVISGFLCGGILGTFAFHAFGYRALFFPAGLTAVVAISYGVY 214          
BLAST of NO16G02290 vs. NCBI_GenBank
Match: ORZ38606.1 (putative transmembrane protein, partial [Catenaria anguillulae PL171])

HSP 1 Score: 112.5 bits (280), Expect = 3.200e-21
Identity = 75/219 (34.25%), Postives = 115/219 (52.51%), Query Frame = 0
Query:   93 RPYFKIILFSSFVLTINASFINLITLHSAKAMASVHVTGMIAHISNFAATRDLAPLYEYIGTYLCFVAGSFTAGVVVTQETFYMGRNYGRALFLIAAVEAAA-LLTEAAYPDTIFFIWLCAYSAGLQNGLTSKFSGNAVRTTHLTGASTDFGIAIGHII-KGRKGEWWKVKLHGIAVVGFFIGGIAGFFAFEHFGHNALLFNMGMTTSLAIAHTFYIAY 310
            R ++ +++  S + T+ A FIN   L  +  +A  HVTG +  + +  AT +     +  G  LCF  GS TAG  +    F +GR+YG AL + AA+   A +     +P   F     AY+ GLQN   + +SG  +RTTH+TG +TD GI  G II +  + E WK+K+ G   +G+ +GGI G +    +G NA+L        L +A  FY+ +
Sbjct:    7 REFYTVVIGGSLLSTL-AGFINAAVLTGSFHVAVTHVTGSLTRLGSSLATANWPSAGQVSGLTLCFFLGSATAGATIDSTRFQLGRSYGIALLVEAAILVLAWVFFNVGHP--AFGSAAAAYACGLQNAFCTGYSGAVLRTTHMTGITTDLGILFGQIIARNPRVESWKIKVFGPLWIGYLVGGILGTWGTLAWGDNAILV---PAVILCMAGVFYLTW 219          
BLAST of NO16G02290 vs. NCBI_GenBank
Match: WP_057160989.1 (DUF1275 domain-containing protein [Lysobacter sp. Root983] >KRD75857.1 hypothetical protein ASE43_13575 [Lysobacter sp. Root983])

HSP 1 Score: 110.5 bits (275), Expect = 1.200e-20
Identity = 73/210 (34.76%), Postives = 105/210 (50.00%), Query Frame = 0
Query:  110 ASFINLITLHSAKAMASVHVTGMIAHISNFAATRDLAPLYEYIGTYLCFVAGSFTAGVVVTQETFYMGRNYGRALFLIAAVEAAALLTEAAYP----DTIFFIWLCAYSAGLQNGLTSKFSGNAVRTTHLTGASTDFGIAIGHIIKGRKGEWWKVKLHGIAVVGFFIGGIAGFFAFEHFGHNALLFNMGMTTSLAIAHTFYIAYHERLSP 316
            A  +N+I     +  A  H+TG  + ++      DL      +G  L F AG+  +G++V   T  +GR YG AL    A+E+A L   AA P      I    L A + GLQN + S +SG+ VRTTHL+G  TD GI +GH ++ R     ++ L  + V GFF GG+ G  +F HFG++AL     +T    +   FY  Y     P
Sbjct:   21 AGMVNVIGYLGFEHQAITHLTGTTSLLAAALVGADLRAATHLLGMILAFFAGAALSGMIVQDSTLRLGRRYGVAL----AIESALLF--AAVPLFHRQQILGALLAAVACGLQNAMASTYSGSVVRTTHLSGMITDLGIGLGHALRRRPLSRQRLSLSALIVAGFFAGGLIGALSFRHFGYDALYLPASLT---GVTGVFYALYRHFRPP 221          
BLAST of NO16G02290 vs. NCBI_GenBank
Match: WP_096056860.1 (DUF1275 domain-containing protein [Verrucomicrobia bacterium] >ATC65229.1 hypothetical protein CMV30_15410 [Verrucomicrobia bacterium])

HSP 1 Score: 110.5 bits (275), Expect = 1.200e-20
Identity = 64/196 (32.65%), Postives = 104/196 (53.06%), Query Frame = 0
Query:   99 ILFSSFVLTINASFINLITLHSAKAMASVHVTGMIAHISNFAATRDLAPLYEYIGTYLCFVAGSFTAGVVVTQETFYMGRNYGRALFLIAAVEAAALLTEAAY---PDTIFFIWLCAYSAGLQNGLTSKFSGNAVRTTHLTGASTDFGIAIGHIIKGRKGEWWKVKLHGIAVVGFFIGGIAGFFAFEHFGHNALLF 292
            +L  +F+LT+ A  +N I           H+TG I+ +S   A  +             F  GSF + V++ Q T +MGR YG     +  V  +ALL  A Y     T+   +L + + GLQN + + +SG  +R+TH+TG  TD GIA GH ++G   +W++++L+G+ + GF +GG+AG   +   G+  L+F
Sbjct:   10 VLMGAFLLTLGAGAVNAIGFLGVHHQGISHLTGTISLVSTRVAAANWEGAVAAGLIVGSFFFGSFLSAVIIRQNTLHMGRRYG-----VVLVMESALLFGAVYLFEGGTVAGAYLASMACGLQNAMATSYSGAVIRSTHMTGIVTDIGIACGHWVRGHPVDWFRMRLYGVLLGGFALGGVAGAAGYARIGYRTLVF 200          
BLAST of NO16G02290 vs. NCBI_GenBank
Match: WP_091054670.1 (DUF1275 domain-containing protein [Opitutus sp. GAS368] >SDR66005.1 Uncharacterized membrane protein YoaK, UPF0700 family [Opitutus sp. GAS368])

HSP 1 Score: 110.2 bits (274), Expect = 1.600e-20
Identity = 64/225 (28.44%), Postives = 110/225 (48.89%), Query Frame = 0
Query:   99 ILFSSFVLTINASFINLITLHSAKAMASVHVTGMIAHISNFAATRDLAPLYEYIGTYLCFVAGSFTAGVVVTQETFYMGRNYGRALFLIAAVEAAALLTEAAYPDTIFFI--------WLCAYSAGLQNGLTSKFSGNAVRTTHLTGASTDFGIAIGHIIKGRKGEWWKVKLHGIAVVGFFIGGIAGFFAFEHFGHNALLFNMGMTTSLAIAHTFYIAYHERLSP 316
            +      L I A  IN +        A  H++G +  +       + A     +     F  G   +G +++Q    +GR YG AL    ++E+ AL         ++F+        +L A + GLQN + S +SG+ +RTTH+TG  TD GIA GH ++G   +W++ +L+G+ ++GFF GG+ G   +E +G++ LLF   ++    + +T Y  Y    +P
Sbjct:   11 VYLGGLALAITAGVINAVGFLGVHHQALSHMSGTVTLLGMELGRGNYAVALHALAILAAFFLGCLVSGALISQGRLRLGRRYGVAL----SLESTALFL------AVYFLRRGANAGDYLAAMACGLQNAMVSSYSGSTMRTTHMTGMVTDLGIACGHFLRGATVDWFRFRLYGVLLLGFFAGGMTGALGYERYGYDTLLFPAILSGMTGVGYTAYKHYERHHAP 225          
BLAST of NO16G02290 vs. NCBI_GenBank
Match: XP_016606529.1 (permease, variant 1 [Spizellomyces punctatus DAOM BR117] >XP_016606530.1 permease [Spizellomyces punctatus DAOM BR117] >XP_016606527.1 permease, variant 3 [Spizellomyces punctatus DAOM BR117] >XP_016606528.1 permease, variant 2 [Spizellomyces punctatus DAOM BR117] >KNC98487.1 permease, variant 3 [Spizellomyces punctatus DAOM BR117] >KNC98488.1 permease, variant 2 [Spizellomyces punctatus DAOM BR117] >KNC98489.1 permease, variant 1 [Spizellomyces punctatus DAOM BR117] >KNC98490.1 permease [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 109.0 bits (271), Expect = 3.500e-20
Identity = 71/219 (32.42%), Postives = 106/219 (48.40%), Query Frame = 0
Query:   88 MNPGERPYFKIILFSSFVLTINASFINLITLHSAKAMASVHVTGMIAHISNFAATRDLAPLYEYIGTYLCFVAGSFTAGVVVTQETFYMGRNYGRALFLIAAVEAAALLTEAAY--PDTIFFIWLCAYSAGLQNGLTSKFSGNAVRTTHLTGASTDFGIAIGHIIK-GRKGEWWKVKLHGIAVVGFFIGGIAGFFAFEHFGHNALLFNMGMTTSLAIAH 304
            MN   +  F  I+    VL +NA FIN++TL     +   H TG ++ I+      D+  L         ++ GSF AG +V    F +GR YG AL L    E+A L     +   + I   W  A++ GLQN L + +SG  VRTTH+TG  TD G  +G   +   K E W++K+H   ++ + IGGI G  ++      +LL     T  +A  +
Sbjct:    1 MNNFAQREFNSIVIGGSVLALNAGFINVVTLAGVFTVTVSHHTGNVSRIAMALLNADITTLALVTSILFSYMFGSFIAGFMVGDNKFRLGRGYGYALIL----ESACLFASFVFLRRELIVGEWCAAFACGLQNALATSYSGAVVRTTHMTGICTDIGNILGQACRLDTKAELWRLKVHVPLLISYLIGGILGQLSYSFLHEKSLLLPCFFTGGVACVY 215          
The following BLAST results are available for this feature:
BLAST of NO16G02290 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23918.15.800e-11663.51Protein of unknown function DUF1275 [Nannochlorops... [more]
EWM24629.17.300e-5038.92hypothetical protein Naga_100117g18 [Nannochlorops... [more]
EWM24177.14.300e-2647.33Protein of unknown function DUF1275 [Nannochlorops... [more]
AER54957.16.400e-2234.62hypothetical protein DSC_01520 [Pseudoxanthomonas ... [more]
WP_043290251.16.400e-2234.62DUF1275 domain-containing protein [Pseudoxanthomon... [more]
ORZ38606.13.200e-2134.25putative transmembrane protein, partial [Catenaria... [more]
WP_057160989.11.200e-2034.76DUF1275 domain-containing protein [Lysobacter sp. ... [more]
WP_096056860.11.200e-2032.65DUF1275 domain-containing protein [Verrucomicrobia... [more]
WP_091054670.11.600e-2028.44DUF1275 domain-containing protein [Opitutus sp. GA... [more]
XP_016606529.13.500e-2032.42permease, variant 1 [Spizellomyces punctatus DAOM ... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL153nonsL153Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR035ngnoR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003190NSK003190Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G02290.1NO16G02290.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|82305gene_6124Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100082g9gene6540Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G02290.1NO16G02290.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G02290 ID=NO16G02290|Name=NO16G02290|organism=Nannochloropsis oceanica|type=gene|length=1543bp
ATGGGAGGAAGCAAGGCACACGGAAAGCGACCGCCCCTGGTGCCTCTGCG
GCACCGCAGGGTCCAATTCTTGATACTTGAATCTGAAAAACAAGATATTC
GTCAACAGGAGTCAGAGACAGGTGTCTCCTCTACCGTCTGGCGACAGTCG
CAAGCTCAGCCACGTAACATAGGCGTGCCCAGCCCATCTTCACGGGCCAG
CCCCACGGCCAAGCTCCAGAGGCAGAAGTCGGGAGACATCTCGGCGTCTC
GCGCCGCCCCTATGAATCCCGGTGAAAGGCCCTACTTCAAAATCATCCTT
TTCTCCTCGTTTGTTTTGACCATTAATGCAAGCTTCATCAATCTCATAAC
TCTCCACTCGGCCAAGGCCATGGCAAGTGTGCATGTCACCGGTATGATTG
CACACATTTCAAACTTTGCTGCGACAAGGGACCTGGCCCCTCTTTACGAg
taagtatctaaatgtgctctccccatgcccctctgcttctttcaagattc
acacaccacccacgtcttaccaccctccttttcctcctacagATACATAG
GCACTTACTTGTGCTTTGTAGCGGGTTCATTTACCGCGGGAGTCGTCGTT
ACTCAAGAAACATTCTATATGGGTCGAAATTACGGGCGTGCATTATTCCT
AATCGCAGCCGTGGAAGCCGCTGCCCTGCTGACGGAGGCGGCGTATCCAG
ACACTATTTTTTTTATTTGGCTTTGCGCTTATTCGGCAGGCCTTCAAAAT
GGATTGACGTCGAAGTTCTCTGGAAACGCCGTGCGAACTACACACCTCAC
GGGCGCCTCGACAGATTTCGgtgcgtgaagcagggttcgagcagcgaatc
gtctttctgtcctagagagttctctgagtcggagtacgagagaaaggact
gggtgagacggcaggggcggaattctcattaacattttctatttttagaa
ttcaaattttcacaaaggtgtaggagaaagttttggtgttgctggttgaa
atggtcatgcgatgagacgaatacccataccctttctccctactgccagG
TATTGCCATTGGCCACATTATTAAAGGCAGGAAGGGGGAGTGGTGGAAGG
TGAAGCTGCACGGAATCGCTGTGGTTGGGTTTTTCATTGGCGGCATTGCC
GGTTTCTTCGCTTTTGAGCACTTCGGTCATAATGCGTTACTGTTCAATAT
GGGTATGACAACATCTCTAGCGATTGCCCACACCTTCTACATCGCTTATC
ACGAGCGCCTCTCGCCAATTTTCGTCCTCGAGTCCAGCCGCGACATCATA
ATGCACAAGCATCGCGTCGCGAATAATTTGGATTTGGGACGTCAGAGCTC
TTTCAATCCCGGCCCCTCCCCCTCGGCCTCCTCCTTGGCAGAGCTCACGC
CTACGTCACGGGCAAAGCGCTTGGCGGGTGCCCGGGCCTCATCCTGCGTG
TCCATGCTCCCCCCTGCTTCCATGGCATCCCGACTCGAACGACACTTTCC
CAAGAACGAGCCAGGCGAAAACGTTGACGACTACAAAGCCTAA
back to top

protein sequence of NO16G02290.1

>NO16G02290.1-protein ID=NO16G02290.1-protein|Name=NO16G02290.1|organism=Nannochloropsis oceanica|type=polypeptide|length=407bp
MGGSKAHGKRPPLVPLRHRRVQFLILESEKQDIRQQESETGVSSTVWRQS
QAQPRNIGVPSPSSRASPTAKLQRQKSGDISASRAAPMNPGERPYFKIIL
FSSFVLTINASFINLITLHSAKAMASVHVTGMIAHISNFAATRDLAPLYE
YIGTYLCFVAGSFTAGVVVTQETFYMGRNYGRALFLIAAVEAAALLTEAA
YPDTIFFIWLCAYSAGLQNGLTSKFSGNAVRTTHLTGASTDFGIAIGHII
KGRKGEWWKVKLHGIAVVGFFIGGIAGFFAFEHFGHNALLFNMGMTTSLA
IAHTFYIAYHERLSPIFVLESSRDIIMHKHRVANNLDLGRQSSFNPGPSP
SASSLAELTPTSRAKRLAGARASSCVSMLPPASMASRLERHFPKNEPGEN
VDDYKA*
back to top
Synonyms
Publications