NO16G02090, NO16G02090 (gene) Nannochloropsis oceanica

Overview
NameNO16G02090
Unique NameNO16G02090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4136
Alignment locationchr16:613287..617422 +

Link to JBrowse

Properties
Property NameValue
DescriptionNeuro-oncological ventral antigen 2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:613287..617422 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
GO:0003723RNA binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036612KH_dom_type_1_sf
IPR004088KH_dom_type_1
IPR004087KH_dom
Homology
BLAST of NO16G02090 vs. NCBI_GenBank
Match: EWM23909.1 (neuro-oncological ventral antigen 2 [Nannochloropsis gaditana])

HSP 1 Score: 328.6 bits (841), Expect = 5.200e-86
Identity = 279/592 (47.13%), Postives = 313/592 (52.87%), Query Frame = 0
Query:  162 SSDVPSAIKLLVSAGLAGCLIGKGGSTINDLQERTGARIKLSQNQDYFPGTQDRIVLISGDAQTCTHAAVLVIEHLHSSTQXXXXXXXXXXXXXXXELE-------EKEGPRDVGADGKGEGMGGREDVEDGREEEHQLSAEEPSSSQDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLLIAKGAGGLVIGRAGATIKALNEESGARIQLAAKDEAAGMVTGERVVTVSGPLKGVVKGVSRILEKLNEEPELARYQNLTTSYSRSTSAAHPLHPAYDIPTYHTQSFGETQALFSPGGPXXXXXXXXXXXXXXXXXXXXXXTHSXXXXXXXXXXXXXXXXXXXXXXXXXPQRLPLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLHQSHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQFANTTLTLQVPDKLIGSILGKSGATLKKFQSQSGARITISKRGEYAPGTQNRVVAIEGPVYCAEVARGMITTTVQQASMAPPPGSY 747
            ++DVPSA+KLLVSAGLAGCL+GKGG TIN LQE TGARIKLSQNQDYFPGTQDR+VLISG+A+TC  A + VI+HLH+S +         XXXXXX  E                                                   XXXXXXXX                          KLLIAK AGGLVIGRAG+TIKALNEE+G RIQLAAKDEA+GMVTGERVVT++GPL GV++GV+R+LEKLNEEPELARYQN+TTSYSR+ +A H +HPA+D+PTY TQSF +TQ LFSP GP                      + S                         P  +PL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                             P  H S P                                    S                                   Q  A   LTLQVPDKLIGSILG+SG TLKK QS SGARI+ISKRGE+APGTQNRVV I+GPV C EVARGM+   VQQASM P  GSY
Sbjct:  131 ATDVPSAVKLLVSAGLAGCLLGKGGGTINVLQEETGARIKLSQNQDYFPGTQDRVVLISGEAETCVTATLRVIKHLHASAEARSAAAAVRXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDESNSHGPRSEAPGEGVGRASASVKLLIAKAAGGLVIGRAGSTIKALNEETGTRIQLAAKDEASGMVTGERVVTIAGPLPGVLRGVARLLEKLNEEPELARYQNMTTSYSRTGAAVHSMHPAFDLPTYQTQSFADTQMLFSPQGPASTRGHALNLSLSGSEGQRGHLSRS--------QGLGHSQARQSQLHSHGPAPIPLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALHSARQAP-------------------PRHHGSGP-----------------------------------PSGHSSPSLMPQHLLYTGHAPPSYQHMAPAFLAMQAAQDAATAVLTLQVPDKLIGSILGRSGVTLKKIQSDSGARISISKRGEFAPGTQNRVVTIDGPVQCTEVARGMVAMAVQQASMGPLQGSY 660          
BLAST of NO16G02090 vs. NCBI_GenBank
Match: XP_005852612.1 (rna-binding protein nova-2, partial [Nannochloropsis gaditana CCMP526] >XP_005856042.1 rna-binding protein nova-2, partial [Nannochloropsis gaditana CCMP526] >EKU20318.1 rna-binding protein nova-2, partial [Nannochloropsis gaditana CCMP526] >EKU23220.1 rna-binding protein nova-2, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 189.1 bits (479), Expect = 4.900e-44
Identity = 94/121 (77.69%), Postives = 110/121 (90.91%), Query Frame = 0
Query:  339 KLLIAKGAGGLVIGRAGATIKALNEESGARIQLAAKDEAAGMVTGERVVTVSGPLKGVVKGVSRILEKLNEEPELARYQNLTTSYSRSTSAAHPLHPAYDIPTYHTQSFGETQALFSPGGP 460
            KLLIAK AGGLVIGRAG+TIKALNEE+G RIQLAAKDEA+GMVTGERVVT++G L GV++GV+R+LEKLNEEPELARYQN+TTSYSR+ +A H +HPA+D+PTY TQSF +TQ LFSP GP
Sbjct:   88 KLLIAKAAGGLVIGRAGSTIKALNEETGTRIQLAAKDEASGMVTGERVVTIAGALPGVLRGVARLLEKLNEEPELARYQNMTTSYSRTGAAVHSMHPAFDLPTYQTQSFADTQMLFSPQGP 208          
BLAST of NO16G02090 vs. NCBI_GenBank
Match: GAQ83784.1 (RNA-binding protein Nova-1 [Klebsormidium nitens])

HSP 1 Score: 102.8 bits (255), Expect = 4.600e-18
Identity = 79/274 (28.83%), Postives = 124/274 (45.26%), Query Frame = 0
Query:  162 SSDVPSAIKLLVSAGLAGCLIGKGGSTINDLQERTGARIKLSQNQDYFPGTQDRIVLISGDAQTCTHAAVLVIEHLHSSTQXXXXXXXXXXXXXXXELEEKEGPRDVGADGKGEGMGGREDVEDGREEEHQLSAEEPSSSQDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLLIAKGAGGLVIGRAGATIKALNEESGARIQLAAKDEAAGMVTGERVVTVSGPLKGVVKGVSRILEKLNEEPELARYQNLTTSYSRSTSAAHPLHP 436
            +SD PS+++ L+S   AG +IGKGGSTI++ Q ++GARI+LS+N+++FPGT DRI+L+SG       A  L++  +                     + E+ G  D+                               +SQ                                    KL++     G +IG+ GATI+A  E+S A I+L+ +D+A   VT +R+VT++G L+  ++ V+ IL K+ E+P    Y N+  SYS  T    P  P
Sbjct:   93 ASDTPSSVRFLISNASAGSIIGKGGSTISEFQLQSGARIQLSRNREFFPGTTDRIILLSGTINAILTALHLILSKI---------------------MTEEAGGGDI----------------------------SQKTSQ-----------------------------------VKLIVPNAVCGGIIGKGGATIRAYVEDSAANIKLSGQDQAVPGVT-DRIVTITGKLEQQMRAVALILAKMTEDPNYMLYSNMPLSYSVYTPVGMPHGP 281          

HSP 2 Score: 62.0 bits (149), Expect = 9.000e-6
Identity = 27/71 (38.03%), Postives = 47/71 (66.20%), Query Frame = 0
Query:  666 LTLQVPDKLIGSILGKSGATLKKFQSQSGARITISKRGEYAPGTQNRVVAIEGPVYCAEVARGMITTTVQQ 737
            +T+ VPD+ +G+I+G+ G T+ + Q  +G RI IS RG++  GT NR + I GP+   ++A+ +++  V Q
Sbjct:  324 ITVAVPDEHVGAIVGRGGRTITEIQQMAGVRIKISDRGDFVMGTTNRKITITGPLEGTQIAQYLLSQKVHQ 394          
BLAST of NO16G02090 vs. NCBI_GenBank
Match: PTQ36960.1 (hypothetical protein MARPO_0060s0047 [Marchantia polymorpha])

HSP 1 Score: 97.1 bits (240), Expect = 2.500e-16
Identity = 72/261 (27.59%), Postives = 118/261 (45.21%), Query Frame = 0
Query:  163 SDVPSAIKLLVSAGLAGCLIGKGGSTINDLQERTGARIKLSQNQDYFPGTQDRIVLISGDAQTCTHAAVLVIEHLHSSTQXXXXXXXXXXXXXXXELEEKEGPRDVGADGKGEGMGGREDVEDGREEEHQLSAEEPSSSQDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLLIAKGAGGLVIGRAGATIKALNEESGARIQLAAKDEAAGMVTGERVVTVSGPLKGVVKGVSRILEKLNEEPELARYQNLTTSY 424
            S + S+I+ L+S   AG +IGKGG+TI++ Q ++ ARI+LS+N +YFPGT DRI+LISG       A  L++  +                                       +   ED  +G ++ +Q+                                             +L++     G +IG+ G+TIKA  E+SGA I+L++ D+    V+ +R+VT++G L+  ++ V  I+ KL+E+P  A+Y N   SY
Sbjct:   47 SSITSSIRFLISNAAAGSVIGKGGATISEFQAQSNARIQLSRNHEYFPGTTDRIILISGTVSEILTALHLILSKI---------------------------------------LNEAEDENEGDQKSNQV---------------------------------------------RLIVPNNVCGAIIGKGGSTIKAFVEDSGANIKLSSHDQTIPGVS-DRMVTITGTLEKQLRAVDSIISKLSEDPNYAQYANAPISY 222          

HSP 2 Score: 65.1 bits (157), Expect = 1.100e-6
Identity = 31/74 (41.89%), Postives = 50/74 (67.57%), Query Frame = 0
Query:  664 TTLTLQVPDKLIGSILGKSGATLKKFQSQSGARITISKRGEYAPGTQNRVVAIEGPVYCAEVARGMITTTVQQA 738
            T+LT+ VPD  IG+I+G++G T+ + Q  SG +I IS+RG++  GT++R V I G      +A+ ++T  VQQ+
Sbjct:  290 TSLTVAVPDDRIGAIVGRAGKTIAEIQMASGVKIKISERGDFVAGTKSRKVTIAGTAEGVRIAQHLLTQKVQQS 363          
BLAST of NO16G02090 vs. NCBI_GenBank
Match: KMZ70553.1 (hypothetical protein ZOSMA_19G01420 [Zostera marina])

HSP 1 Score: 94.4 bits (233), Expect = 1.600e-15
Identity = 82/286 (28.67%), Postives = 127/286 (44.41%), Query Frame = 0
Query:  165 VPSAIKLLVSAGLAGCLIGKGGSTINDLQERTGARIKLSQNQDYFPGTQDRIVLISGDAQTCTHAAVLVIEHLHSSTQXXXXXXXXXXXXXXXELEEKEGPRDVGADGKGEGMGGREDVEDGREEEHQLSAEEPSSSQDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLLIAKGAGGLVIGRAGATIKALNEESGARIQLAAKDEAAGMVTGERVVTVSGPLKGVVKGVSRILEKLNEEPELARYQNLTTSYSRSTSAAHPLHPAYDIPT--YHTQSFG 449
            V + I+LLVS   AGC+IGKGGSTI + Q ++GARI+LS+NQ++FPGT DRI++ISG       A  L+ E L S T                                          ED  + E++                                              +L++  G  G +IG+ G+ IK+L +ES A I+++ +D++   V  +R+VT++G L+  ++ V  IL KLNE+   +   N    Y+     A P+   Y IP+  Y+T ++G
Sbjct:   36 VTTYIRLLVSNTSAGCIIGKGGSTITEFQSQSGARIQLSRNQEFFPGTSDRIIMISGGFDEIMQAMQLIHEKLSSET------------------------------------------EDNNDVENKSKV-------------------------------------------RLIVPNGCCGGIIGKGGSMIKSLIDESQAGIKISPQDQSFPGV-NDRIVTLTGSLEEQMRAVYLILSKLNEDSHYSHTVNTPYPYAGVNFPAIPV--GYGIPSVPYNTMNYG 233          
BLAST of NO16G02090 vs. NCBI_GenBank
Match: XP_013622064.1 (PREDICTED: protein BTR1 isoform X1 [Brassica oleracea var. oleracea] >XP_022554203.1 protein BTR1-like isoform X1 [Brassica napus])

HSP 1 Score: 94.0 bits (232), Expect = 2.100e-15
Identity = 81/298 (27.18%), Postives = 131/298 (43.96%), Query Frame = 0
Query:  162 SSDVPSAIKLLVSAGLAGCLIGKGGSTINDLQERTGARIKLSQNQDYFPGTQDRIVLISGDAQTCTHAAVLVIEHLHSSTQXXXXXXXXXXXXXXXELEEKEGPRDVGADGKGEGMGGREDVEDGREEEHQLSAEEPSSSQDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLLIAKGAGGLVIGRAGATIKALNEESGARIQLAAKDEAAGMVTGERVVTVSGPLKGVVKGVSRILEKLNEEPELARYQNLTTSYSRSTSAAHPLHP-AYDIPTYHTQSFGETQALFSPGG 459
            S++ P+ I+ LVS   AG +IGKGGSTI + Q ++GARI+LS+NQ++FPGT DRI++ISG  +   +   L+++ LHS                  EL  +EG                 DVE  R                                                   +L++   + G +IG+ GATIK+  EES A I+++  D     ++ +R+VT+SG  +  ++ +  IL KL E+   ++  +   SY+  + +    HP AY +P+  T  +       +  G
Sbjct:   24 SAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLHS------------------ELHAEEG----------------SDVEPRRR-------------------------------------------------LRLVVPNSSCGGIIGKGGATIKSFTEESKAGIKISPLDNTFYGLS-DRLVTLSGTFEEQMRAIDLILAKLTEDDHYSQNVHSPYSYAGLSHSGFHGHPYAYVLPSVATAGYNSANYAHNGSG 237          
BLAST of NO16G02090 vs. NCBI_GenBank
Match: XP_005839430.1 (hypothetical protein GUITHDRAFT_101621 [Guillardia theta CCMP2712] >EKX52450.1 hypothetical protein GUITHDRAFT_101621 [Guillardia theta CCMP2712])

HSP 1 Score: 93.2 bits (230), Expect = 3.700e-15
Identity = 78/271 (28.78%), Postives = 113/271 (41.70%), Query Frame = 0
Query:  157 GGSIASSD-VPSAIKLLVSAGLAGCLIGKGGSTINDLQERTGARIKLSQNQDYFPGTQDRIVLISGDAQTCTHAAVLVIEHLHSSTQXXXXXXXXXXXXXXXELEEKEGPRDVGADGKGEGMGGREDVEDGREEEHQLSAEEPSSSQDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLLIAKGAGGLVIGRAGATIKALNEESGARIQLAAKDEAAGMVTGERVVTVSGPLKGVVKGVSRILEKLNEEPELARYQNLTTSYSRS 427
            G  I+S D    A+K+L+    AG +IGK G+TIN +++ +GA++K+S N + FPGT DRIVLISG  +T   AA +VI  ++                          P DV A                                                                     ++I   A GLVIG+ G  I +L EE+ A+IQL AKD+ A     ER+VT+ G L      V +I+  ++E+  + RY+NL T+Y  S
Sbjct:   25 GDGISSGDETQMALKILIGNKSAGSVIGKAGATINSIKDTSGAKVKVSSNSETFPGTADRIVLISGKVETVLSAAKMVISEMYRDPNSGRV------------------PDDVNA----------------------------------------------------------------VMTVSIVIPAAACGLVIGKGGEKINSLREETQAKIQLQAKDKVAIPGLNERIVTIQGTLPQAQTAVEKIVHLIHEDGNI-RYENLGTNYGMS 212          

HSP 2 Score: 60.5 bits (145), Expect = 2.600e-5
Identity = 31/80 (38.75%), Postives = 48/80 (60.00%), Query Frame = 0
Query:  663 NTTLTLQVPDKLIGSILGKSGATLKKFQSQSGARITISKRGEYAPGTQNRVVAIEGPVYCAEVARGMITTTVQQASMAPP 743
            +T L L + D  +G +LGK G  LK++ S SGA I +S+RG+  PGT NR + I+G     + A+ ++   +Q+A  A P
Sbjct:  281 HTVLKLSITDDAVGPLLGKGGCNLKEYISVSGANIKVSQRGDTIPGTNNRYITIQGTAAAVQYAQLLV---LQKAPNATP 357          
BLAST of NO16G02090 vs. NCBI_GenBank
Match: EXB39447.1 (RNA-binding protein Nova-1 [Morus notabilis])

HSP 1 Score: 93.2 bits (230), Expect = 3.700e-15
Identity = 81/299 (27.09%), Postives = 126/299 (42.14%), Query Frame = 0
Query:  160 IASSDVPSAIKLLVSAGLAGCLIGKGGSTINDLQERTGARIKLSQNQDYFPGTQDRIVLISGDAQTCTHAAVLVIEHLHSSTQXXXXXXXXXXXXXXXELEEKEGPRDVGADGKGEGMGGREDVEDGREEEHQLSAEEPSSSQDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLLIAKGAGGLVIGRAGATIKALNEESGARIQLAAKDEAAGMVTGERVVTVSGPLKGVVKGVSRILEKLNEEPELARYQNLTTSYSRSTSAAHPLHPAYDIPTYHTQSFGETQALFSPGG 459
            + S + P+ IK LVS   AG +IGKGG+TI D Q ++GARI+LS+N ++FPGT DRI++ISG       A  LV+  L S  Q                                             EEE+ +   +                                         +L++  G+ G +IG+ G+TIK+  EES A I+++ +D    +   +R+VT++G L   ++ +  IL KL E+P   +  N   SY    S  H     + +P+  T S+ +T   + P G
Sbjct:   43 LESMERPAYIKFLVSNAAAGSVIGKGGATITDFQSKSGARIQLSRNHEFFPGTTDRIIMISGAINEIIKAMELVLAKLLSELQ--------------------------------------------TEEENDVDPRK---------------------------------------KLRLVVPNGSCGGIIGKGGSTIKSFIEESQAGIKISPQDNNY-LGINDRLVTLTGTLDEQMRAIDLILSKLAEDPHYTQSMNAPFSYPGVFSGIHGTPYPHVLPSVATASYNQTG--YGPNG 255          
BLAST of NO16G02090 vs. NCBI_GenBank
Match: OWM70255.1 (hypothetical protein CDL15_Pgr026105 [Punica granatum])

HSP 1 Score: 93.2 bits (230), Expect = 3.700e-15
Identity = 83/295 (28.14%), Postives = 130/295 (44.07%), Query Frame = 0
Query:  162 SSDVPSAIKLLVSAGLAGCLIGKGGSTINDLQERTGARIKLSQNQDYFPGTQDRIVLISGDAQTCTHAAVLVIEHLHSSTQXXXXXXXXXXXXXXXELEEKEGPRDVGADGKGEGMGGREDVEDGREEEHQLSAEEPSSSQDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLLIAKGAGGLVIGRAGATIKALNEESGARIQLAAKDEAAGMVTGERVVTVSGPLKGVVKGVSRILEKLNEEPELARYQNLTTSYSR-STSAAHPLHPAYDIPT-----YHTQSFGET 451
            S + P+ I+ LVS   AG +IGKGGSTI D Q ++GARI+LS+N ++FPGT DRI++ISG       A  LV+  L +                  E+  +EG                             +  +P S                                      +L++     G +IG+AGATIK+  EES A I+++++D        +R+VTV+G L   ++ +  IL KL+E+P   +  N   SY+    S+ H +   Y++P+     Y+T ++G T
Sbjct:   30 SMEKPTYIRFLVSNAAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTSDRIIMISGSIDDILKAVELVLSKLMT------------------EIPAEEG-----------------------------NEVDPRSK------------------------------------VRLIVPNSFCGGIIGKAGATIKSFIEESQAGIKISSQDNNY-YGLNDRLVTVTGTLDEQMRAIDLILSKLSEDPHYPQSMNAPFSYAGVYFSSFHGIPYTYELPSVATAAYNTVNYGPT 240          
BLAST of NO16G02090 vs. NCBI_GenBank
Match: XP_002293259.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED89720.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 92.8 bits (229), Expect = 4.800e-15
Identity = 87/312 (27.88%), Postives = 131/312 (41.99%), Query Frame = 0
Query:  167 SAIKLLVSAGLAGCLIGKGGSTINDLQERTGARIKLSQNQDYFPGTQDRIVLISGDAQTCTHAAVLVIEHLHSSTQXXXXXXXXXXXXXXXELEEKEGPRDVGADGKGEGMGGREDVEDGREEEHQLSAEEPSSSQDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLLIAKGAGGLVIGRAGATIKALNEESGAR-IQLAAKDE---------------AAGMVTGERVVTVSGPLKGVVKGVSRILEKLNEEPELARYQNLTTSYSRSTSA---------AHPLHPAYDIPTYHTQSFGETQAL 454
            +AIKLLVS   +GC+IG+ G TI++LQ  +  RIKLSQ  DY+PGTQDR+ LI G       A  +++  L                     L+ +    + G                        S   P + Q                                     +L+   + G++IGR G+ IK++ EESG   IQL+ K++                    T ER++T+SG  +  VK V  ILE++   PE++RY N+TTSYS+  +A         +HP  P+   PT H+  FG  +++
Sbjct:    1 TAIKLLVSNNSSGCIIGRSGKTISELQADSSTRIKLSQGGDYYPGTQDRVCLIQGSLDNARVAVEMILLKL---------------------LQVESIVNEFG------------------------SVAMPFTIQ-------------------------------------VLVPTPSCGMLIGRGGSNIKSIKEESGVSFIQLSQKEQDNNHTANAIMSNTAINTAATTSERIITISGCFESCVKCVLLILEEMASNPEVSRYMNMTTSYSKVVAAQQSAATAQSSHP--PSLSAPT-HSIQFGIPESM 227          
The following BLAST results are available for this feature:
BLAST of NO16G02090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23909.15.200e-8647.13neuro-oncological ventral antigen 2 [Nannochlorops... [more]
XP_005852612.14.900e-4477.69rna-binding protein nova-2, partial [Nannochlorops... [more]
GAQ83784.14.600e-1828.83RNA-binding protein Nova-1 [Klebsormidium nitens][more]
PTQ36960.12.500e-1627.59hypothetical protein MARPO_0060s0047 [Marchantia p... [more]
KMZ70553.11.600e-1528.67hypothetical protein ZOSMA_19G01420 [Zostera marin... [more]
XP_013622064.12.100e-1527.18PREDICTED: protein BTR1 isoform X1 [Brassica olera... [more]
XP_005839430.13.700e-1528.78hypothetical protein GUITHDRAFT_101621 [Guillardia... [more]
EXB39447.13.700e-1527.09RNA-binding protein Nova-1 [Morus notabilis][more]
OWM70255.13.700e-1528.14hypothetical protein CDL15_Pgr026105 [Punica grana... [more]
XP_002293259.14.800e-1527.88predicted protein, partial [Thalassiosira pseudona... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL153nonsL153Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR035ngnoR035Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G02090.1NO16G02090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO16G02090.2NO16G02090.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|556961gene_6102Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G02090.1NO16G02090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO16G02090.2NO16G02090.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G02090 ID=NO16G02090|Name=NO16G02090|organism=Nannochloropsis oceanica|type=gene|length=4136bp
TCGGTTCGGGAAGAACGACAGAATATCACAGAGCACTCTCTGGCTTGGAA
AAAACTTCCACCGGCGAATGCGGCATAAACAGATAGCGCACTGTCGGTGG
GGGCTTCCCATTTTCACCATCATCTACCTAAGACATTTGCCCTCTTTAAC
TCTACACACATGTGTGAAGTGAGGCATTATCTGGTGTCTGGTGTCGGCAG
AGATGGATGGGCCTCGATCGCTTTTTTTCCCCTGCTCTCTCGGTCTGCTA
TCGTGTGTCTTGCTCATGGCATCACTTGAGACCGCGTTTGCGCCTTGGTA
CATCACGCCCACCCACTCACTTTGTTACACACCTATCCAGTGAAAGAGGA
CGTCGCTCGTGCTTTCCGGGCCGAATTTGTTTCCTGTACTATTTCGGGGC
GCATTTGCCCAGCGACTGGGGAGTTTTAGTTGTTTTACAACTTCACAAGG
TTTCTCTGCGGTGACTGACCTCACACACACATCGGTAAGTTCCTTGTGGA
AGACCGACAAGGGCCTTGGAAACGCAGCAAAGGAGAACAAGATTGATGAC
AGTGCGGGCATGCATGTAATCATAGGCATTGCCGACATGCTGCTTGATGT
CAAGGCCGTCGGGGGAAAATAGAGGGAGGAGGCATGGTTTTGTGATGATG
CCTCCGCCGGGGCGGCACTGCCGACACGTCCACCTTTTTCATCCCTCCCT
TTTTCCCTTCTTCTCCGCTCTAAATAGACAGAGGCATAGTGTTGCCATGT
CGGACGCGATGAGCCCAGAGCCGGGACTGGAAACGGAGTCATTGCCAGgc
atgttcacttgttgggggcgggtggtcggtttgaaccgttcgttatttag
ggagcttgtctgatgcatttcgacgtgcgcccagttattcattttattcc
attacaacaaacagAGAAAATTGGCGAAGCGGTCGGGGAAAAAAAGGTCG
TGACCGGAGAAGAAGCGGAGAACGGCAACGACGGGGAGGAGGAGGACGGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGACTCAACAG
CAGATCCAACTGCAGCCTCAATAACAAGATTCAGGGTCATCAGAAGAATA
TCCGCAGTTCTGATATCAATTGTCCCGGTCCCACTTCCCCCGTTGCTGCC
ACTTCTGCCATTGCTGGCCTCACTCACGGGGGGAAGAGTCGACCTCCCCC
ATTCAACACTGCTCACACCACCATCCAATCCTCGTCCTCTTCCTCATCCT
CCTCCGCCATCGCTATCAACACTCAGCACCATCAGCACCACCACCACATT
TCCGGCAGCACCTCGGGCGGAGTAAGGGAGGGAGGGAGCATTGCCTCTTC
CGACGTCCCAAGTGCGATCAAGCTTCTGGTCTCCGCGGGACTTGCCGGTT
GTCTCATCGGGAAAGGTGGGAGCACAATAAATGACCTACAAGAACGTACA
GGGGCCCGTATAAAGCTCTCACAGAACCAGGATTACTTTCCCGGGACTCA
GGATAGGATTGTTTTGATTAGCGGTGATGCACAGACGTGCACCCATGCTG
CTGTTCTCGTCATAGAGCATCTGCATTCCAGCACCCAGGCACGGACAGCC
GCAGCGGCGGCGGCTGCTTCTGATAACGGAGGAGAGTTGGAGGAGAAGGA
GGGGCCAAGAGACGTGGGAGCTGACGGGAAGGGGGAGGGGATGGGAGGGA
GGGAAGACGTGGAGGATGGCAGGGAGGAGGAGCATCAGCTATCAGCAGAA
GAACCATCATCATCACAAGATTACCAACAAAGAGACTCCCGGCCAAATTC
TCCAACCTCAGCCTCCTCCTCTACACCACCACTACCTCCTGCTCCCACCA
ACAGCTGCACCAGCACCACTTCCGTCAAACTCCTCATCGCCAAGGGAGCC
GGCGGGCTCGTCATTGGCCGGGCTGGTGCGACTATCAAAGCCCTCAACGA
AGAATCGGGCGCAAGGATCCAGCTCGCCGCAAAGGATGAAGCTGCTGGGA
TGGTGACCGGGGAGAGGGTCGTCACCGTCTCCGGGCCATTGAAGGGCGTA
GTGAAAGGGGTTTCCCGTATCCTGGAGAAATTGAACGAAGAGCCCGAGTT
GGCAAGGTACCAGAATCTGACCACGTCTTATTCGCGGTCGACCAGCGCGG
CGCATCCTCTGCATCCTGCCTATGATATCCCGACTTACCACACGCAGAGC
TTTGGGGAGACGCAGGCGTTGTTCTCTCCTGGGGGGCCGGGGGGGGCTGG
CAGTGATGGGAAAGGAAGGGGGATGGGGGTTGGGTCTCCCCATCATCATG
GACTGACTCATTCGTTGAGTGTGGATAGTTCTCACAGTAGTGCAGGAGGA
GGAGGAGGGGGAGAGAGGGGAGGCGGGGGAGGATATGTGCCGCAAAGGTT
GCCGCTGCAGTCGCCCTTGTCCACTCATTCTTCTCATTCTCACGGTCATG
GACACGTGCACCCACATGTTCCGCACGGCCTTCATATAGGAGGACATGGC
CATGCACAATTTCATCAGCAGCAGAACATACAGCACCAGCAGCACCAGCA
GCACAGCCTAGTCCACTCCCACTCCCACGGCGGCAATGGCCACCACCCCC
TCCTACACCAGTCGCACCCCCACGCTGCGCACCCTCCTGTCCCTCTTCAC
GGAGGAAGGGGTGGAGGAGGAAGAGGAAGAGGAGGAGGTGGTGGAGAAGG
AGGAGGAAGATACGCGCACGTTCATAACTCCCTCTCCCACCACCCCCAGC
AGCCGCAACACGTCCACCACCACCACATACAACAACCTCCCTCCTCAAAT
TCCTCCCTCGTCGCCTTGCAGCAGCAGCTCCAGCACCAGCAGTTCGCCAA
CACTACCCTGACCCTCCAAGTCCCCGACAAACTCATAGGCTCCATTCTGG
GTAAATCCGGGGCGACTCTTAAAAAGTTTCAGTCTCAATCAGGAGCTCGA
ATTACGATCTCGAAACGAGGCGAATACGCCCCGGGGACGCAAAATAGGGT
CGTGGCAATTGAAGGGCCTGTTTACTGTGCGGAGGTGGCACGAGGGATGA
TCACGACGACGGTGCAACAGGCGAGCATGGCTCCTCCTCCTGGCTCTTAT
TGAGGGGGGAGGAAGGGAAGGAGAGACTGTGTTCGTAGCGTTCTATGTGT
GTATATCGTCCAAGAAAAAAGGAAGCGGTCGGTTGTTAAACAATGACAGG
GGTAAAACAAATTTGCCCGAAAAAAGTGTGAAATGGGGTATATTTTCGCG
GGTAAGGAGAAATGAGGATTCCGTGTATACATACATATATATGGAAGAAA
AAAAGGTGGATATCAACTGTAGTGTTTGTTTTGTCATGTTTAAGTATGTG
TGGGTACATGTGTGAGACCTCTCCCATCATCACTACCACACCCCGAGCAC
CAGTACCAATATCAGGATCTGCAAGAGCACAAGAAAGAAATTTGTCAAAT
CGAAGGAGAGCATGTATGTCTCATGGCATCTTCTCGAGAACGCCTCTTTT
GCCCTTTCTCCACAAACAAATGGAGGGAAAAAAGATGTAGAGATGAAATA
ACAGAGGAGGGTAAAGAGGGGAAGAGGAAGTGGATAGGGAGCCTGCGTGT
GTGCGGTGTGTGCTCTCGGAGGATGAAGAACGACAACCATGCACCTGAAA
AACACCAACAATAGTACATCGTCAACCACATCAACCACGACAACTACAGC
CACAACAACCATAACAAAAACAATAATAACAACTGTTCTCTAATACCGTG
GGGTGGGAGGTGAAGACCGAGGACAAGAGCTACACTAAACATATGAAAAA
GAAGAAGTGAAAGAGGGAGGCGAGGAACAACTAAAAAAAGACACGAGGGT
ACCACGGCGCGAGTAATTGACGGCAAAACAGCGAACAGCAGCCAGGGGGT
GGGGCATTTATTGTGTGGATGTCTGTCCGGTAGCACATGTACGATGGTGT
GTGATGACGTGTAGAAATTGGAGGCTTCTGTCACGGTTGCTACAGAGACG
ATGACGACAACGACAACGACAGTTGAAATAATTAACAGTGGCGCAAGAAA
ACGATGTGAGAAACAAGAAAGGAGAGAATAATCAAGATCGTAAAAATAAG
AAACAAGCAATAATATTGATCATCGTAAAACAGACA
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protein sequence of NO16G02090.1

>NO16G02090.1-protein ID=NO16G02090.1-protein|Name=NO16G02090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=747bp
MSDAMSPEPGLETESLPEKIGEAVGEKKVVTGEEAENGNDGEEEDGSSSS
SSSSSSSSSRLNSRSNCSLNNKIQGHQKNIRSSDINCPGPTSPVAATSAI
AGLTHGGKSRPPPFNTAHTTIQSSSSSSSSSAIAINTQHHQHHHHISGST
SGGVREGGSIASSDVPSAIKLLVSAGLAGCLIGKGGSTINDLQERTGARI
KLSQNQDYFPGTQDRIVLISGDAQTCTHAAVLVIEHLHSSTQARTAAAAA
AASDNGGELEEKEGPRDVGADGKGEGMGGREDVEDGREEEHQLSAEEPSS
SQDYQQRDSRPNSPTSASSSTPPLPPAPTNSCTSTTSVKLLIAKGAGGLV
IGRAGATIKALNEESGARIQLAAKDEAAGMVTGERVVTVSGPLKGVVKGV
SRILEKLNEEPELARYQNLTTSYSRSTSAAHPLHPAYDIPTYHTQSFGET
QALFSPGGPGGAGSDGKGRGMGVGSPHHHGLTHSLSVDSSHSSAGGGGGG
ERGGGGGYVPQRLPLQSPLSTHSSHSHGHGHVHPHVPHGLHIGGHGHAQF
HQQQNIQHQQHQQHSLVHSHSHGGNGHHPLLHQSHPHAAHPPVPLHGGRG
GGGRGRGGGGGEGGGRYAHVHNSLSHHPQQPQHVHHHHIQQPPSSNSSLV
ALQQQLQHQQFANTTLTLQVPDKLIGSILGKSGATLKKFQSQSGARITIS
KRGEYAPGTQNRVVAIEGPVYCAEVARGMITTTVQQASMAPPPGSY*
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protein sequence of NO16G02090.2

>NO16G02090.2-protein ID=NO16G02090.2-protein|Name=NO16G02090.2|organism=Nannochloropsis oceanica|type=polypeptide|length=797bp
MSRPSGENRGRRHGFVMMPPPGRHCRHVHLFHPSLFPFFSALNRQRHSVA
MSDAMSPEPGLETESLPEKIGEAVGEKKVVTGEEAENGNDGEEEDGSSSS
SSSSSSSSSRLNSRSNCSLNNKIQGHQKNIRSSDINCPGPTSPVAATSAI
AGLTHGGKSRPPPFNTAHTTIQSSSSSSSSSAIAINTQHHQHHHHISGST
SGGVREGGSIASSDVPSAIKLLVSAGLAGCLIGKGGSTINDLQERTGARI
KLSQNQDYFPGTQDRIVLISGDAQTCTHAAVLVIEHLHSSTQARTAAAAA
AASDNGGELEEKEGPRDVGADGKGEGMGGREDVEDGREEEHQLSAEEPSS
SQDYQQRDSRPNSPTSASSSTPPLPPAPTNSCTSTTSVKLLIAKGAGGLV
IGRAGATIKALNEESGARIQLAAKDEAAGMVTGERVVTVSGPLKGVVKGV
SRILEKLNEEPELARYQNLTTSYSRSTSAAHPLHPAYDIPTYHTQSFGET
QALFSPGGPGGAGSDGKGRGMGVGSPHHHGLTHSLSVDSSHSSAGGGGGG
ERGGGGGYVPQRLPLQSPLSTHSSHSHGHGHVHPHVPHGLHIGGHGHAQF
HQQQNIQHQQHQQHSLVHSHSHGGNGHHPLLHQSHPHAAHPPVPLHGGRG
GGGRGRGGGGGEGGGRYAHVHNSLSHHPQQPQHVHHHHIQQPPSSNSSLV
ALQQQLQHQQFANTTLTLQVPDKLIGSILGKSGATLKKFQSQSGARITIS
KRGEYAPGTQNRVVAIEGPVYCAEVARGMITTTVQQASMAPPPGSY*
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Synonyms
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