NO16G02090, NO16G02090 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G02090 vs. NCBI_GenBank
Match: EWM23909.1 (neuro-oncological ventral antigen 2 [Nannochloropsis gaditana]) HSP 1 Score: 328.6 bits (841), Expect = 5.200e-86 Identity = 279/592 (47.13%), Postives = 313/592 (52.87%), Query Frame = 0
Query: 162 SSDVPSAIKLLVSAGLAGCLIGKGGSTINDLQERTGARIKLSQNQDYFPGTQDRIVLISGDAQTCTHAAVLVIEHLHSSTQXXXXXXXXXXXXXXXELE-------EKEGPRDVGADGKGEGMGGREDVEDGREEEHQLSAEEPSSSQDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLLIAKGAGGLVIGRAGATIKALNEESGARIQLAAKDEAAGMVTGERVVTVSGPLKGVVKGVSRILEKLNEEPELARYQNLTTSYSRSTSAAHPLHPAYDIPTYHTQSFGETQALFSPGGPXXXXXXXXXXXXXXXXXXXXXXTHSXXXXXXXXXXXXXXXXXXXXXXXXXPQRLPLQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHPLLHQSHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQFANTTLTLQVPDKLIGSILGKSGATLKKFQSQSGARITISKRGEYAPGTQNRVVAIEGPVYCAEVARGMITTTVQQASMAPPPGSY 747
++DVPSA+KLLVSAGLAGCL+GKGG TIN LQE TGARIKLSQNQDYFPGTQDR+VLISG+A+TC A + VI+HLH+S + XXXXXX E XXXXXXXX KLLIAK AGGLVIGRAG+TIKALNEE+G RIQLAAKDEA+GMVTGERVVT++GPL GV++GV+R+LEKLNEEPELARYQN+TTSYSR+ +A H +HPA+D+PTY TQSF +TQ LFSP GP + S P +PL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P H S P S Q A LTLQVPDKLIGSILG+SG TLKK QS SGARI+ISKRGE+APGTQNRVV I+GPV C EVARGM+ VQQASM P GSY
Sbjct: 131 ATDVPSAVKLLVSAGLAGCLLGKGGGTINVLQEETGARIKLSQNQDYFPGTQDRVVLISGEAETCVTATLRVIKHLHASAEARSAAAAVRXXXXXXXEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDESNSHGPRSEAPGEGVGRASASVKLLIAKAAGGLVIGRAGSTIKALNEETGTRIQLAAKDEASGMVTGERVVTIAGPLPGVLRGVARLLEKLNEEPELARYQNMTTSYSRTGAAVHSMHPAFDLPTYQTQSFADTQMLFSPQGPASTRGHALNLSLSGSEGQRGHLSRS--------QGLGHSQARQSQLHSHGPAPIPLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSALHSARQAP-------------------PRHHGSGP-----------------------------------PSGHSSPSLMPQHLLYTGHAPPSYQHMAPAFLAMQAAQDAATAVLTLQVPDKLIGSILGRSGVTLKKIQSDSGARISISKRGEFAPGTQNRVVTIDGPVQCTEVARGMVAMAVQQASMGPLQGSY 660
BLAST of NO16G02090 vs. NCBI_GenBank
Match: XP_005852612.1 (rna-binding protein nova-2, partial [Nannochloropsis gaditana CCMP526] >XP_005856042.1 rna-binding protein nova-2, partial [Nannochloropsis gaditana CCMP526] >EKU20318.1 rna-binding protein nova-2, partial [Nannochloropsis gaditana CCMP526] >EKU23220.1 rna-binding protein nova-2, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 189.1 bits (479), Expect = 4.900e-44 Identity = 94/121 (77.69%), Postives = 110/121 (90.91%), Query Frame = 0
Query: 339 KLLIAKGAGGLVIGRAGATIKALNEESGARIQLAAKDEAAGMVTGERVVTVSGPLKGVVKGVSRILEKLNEEPELARYQNLTTSYSRSTSAAHPLHPAYDIPTYHTQSFGETQALFSPGGP 460
KLLIAK AGGLVIGRAG+TIKALNEE+G RIQLAAKDEA+GMVTGERVVT++G L GV++GV+R+LEKLNEEPELARYQN+TTSYSR+ +A H +HPA+D+PTY TQSF +TQ LFSP GP
Sbjct: 88 KLLIAKAAGGLVIGRAGSTIKALNEETGTRIQLAAKDEASGMVTGERVVTIAGALPGVLRGVARLLEKLNEEPELARYQNMTTSYSRTGAAVHSMHPAFDLPTYQTQSFADTQMLFSPQGP 208
BLAST of NO16G02090 vs. NCBI_GenBank
Match: GAQ83784.1 (RNA-binding protein Nova-1 [Klebsormidium nitens]) HSP 1 Score: 102.8 bits (255), Expect = 4.600e-18 Identity = 79/274 (28.83%), Postives = 124/274 (45.26%), Query Frame = 0
Query: 162 SSDVPSAIKLLVSAGLAGCLIGKGGSTINDLQERTGARIKLSQNQDYFPGTQDRIVLISGDAQTCTHAAVLVIEHLHSSTQXXXXXXXXXXXXXXXELEEKEGPRDVGADGKGEGMGGREDVEDGREEEHQLSAEEPSSSQDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLLIAKGAGGLVIGRAGATIKALNEESGARIQLAAKDEAAGMVTGERVVTVSGPLKGVVKGVSRILEKLNEEPELARYQNLTTSYSRSTSAAHPLHP 436
+SD PS+++ L+S AG +IGKGGSTI++ Q ++GARI+LS+N+++FPGT DRI+L+SG A L++ + + E+ G D+ +SQ KL++ G +IG+ GATI+A E+S A I+L+ +D+A VT +R+VT++G L+ ++ V+ IL K+ E+P Y N+ SYS T P P
Sbjct: 93 ASDTPSSVRFLISNASAGSIIGKGGSTISEFQLQSGARIQLSRNREFFPGTTDRIILLSGTINAILTALHLILSKI---------------------MTEEAGGGDI----------------------------SQKTSQ-----------------------------------VKLIVPNAVCGGIIGKGGATIRAYVEDSAANIKLSGQDQAVPGVT-DRIVTITGKLEQQMRAVALILAKMTEDPNYMLYSNMPLSYSVYTPVGMPHGP 281 HSP 2 Score: 62.0 bits (149), Expect = 9.000e-6 Identity = 27/71 (38.03%), Postives = 47/71 (66.20%), Query Frame = 0
Query: 666 LTLQVPDKLIGSILGKSGATLKKFQSQSGARITISKRGEYAPGTQNRVVAIEGPVYCAEVARGMITTTVQQ 737
+T+ VPD+ +G+I+G+ G T+ + Q +G RI IS RG++ GT NR + I GP+ ++A+ +++ V Q
Sbjct: 324 ITVAVPDEHVGAIVGRGGRTITEIQQMAGVRIKISDRGDFVMGTTNRKITITGPLEGTQIAQYLLSQKVHQ 394
BLAST of NO16G02090 vs. NCBI_GenBank
Match: PTQ36960.1 (hypothetical protein MARPO_0060s0047 [Marchantia polymorpha]) HSP 1 Score: 97.1 bits (240), Expect = 2.500e-16 Identity = 72/261 (27.59%), Postives = 118/261 (45.21%), Query Frame = 0
Query: 163 SDVPSAIKLLVSAGLAGCLIGKGGSTINDLQERTGARIKLSQNQDYFPGTQDRIVLISGDAQTCTHAAVLVIEHLHSSTQXXXXXXXXXXXXXXXELEEKEGPRDVGADGKGEGMGGREDVEDGREEEHQLSAEEPSSSQDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLLIAKGAGGLVIGRAGATIKALNEESGARIQLAAKDEAAGMVTGERVVTVSGPLKGVVKGVSRILEKLNEEPELARYQNLTTSY 424
S + S+I+ L+S AG +IGKGG+TI++ Q ++ ARI+LS+N +YFPGT DRI+LISG A L++ + + ED +G ++ +Q+ +L++ G +IG+ G+TIKA E+SGA I+L++ D+ V+ +R+VT++G L+ ++ V I+ KL+E+P A+Y N SY
Sbjct: 47 SSITSSIRFLISNAAAGSVIGKGGATISEFQAQSNARIQLSRNHEYFPGTTDRIILISGTVSEILTALHLILSKI---------------------------------------LNEAEDENEGDQKSNQV---------------------------------------------RLIVPNNVCGAIIGKGGSTIKAFVEDSGANIKLSSHDQTIPGVS-DRMVTITGTLEKQLRAVDSIISKLSEDPNYAQYANAPISY 222 HSP 2 Score: 65.1 bits (157), Expect = 1.100e-6 Identity = 31/74 (41.89%), Postives = 50/74 (67.57%), Query Frame = 0
Query: 664 TTLTLQVPDKLIGSILGKSGATLKKFQSQSGARITISKRGEYAPGTQNRVVAIEGPVYCAEVARGMITTTVQQA 738
T+LT+ VPD IG+I+G++G T+ + Q SG +I IS+RG++ GT++R V I G +A+ ++T VQQ+
Sbjct: 290 TSLTVAVPDDRIGAIVGRAGKTIAEIQMASGVKIKISERGDFVAGTKSRKVTIAGTAEGVRIAQHLLTQKVQQS 363
BLAST of NO16G02090 vs. NCBI_GenBank
Match: KMZ70553.1 (hypothetical protein ZOSMA_19G01420 [Zostera marina]) HSP 1 Score: 94.4 bits (233), Expect = 1.600e-15 Identity = 82/286 (28.67%), Postives = 127/286 (44.41%), Query Frame = 0
Query: 165 VPSAIKLLVSAGLAGCLIGKGGSTINDLQERTGARIKLSQNQDYFPGTQDRIVLISGDAQTCTHAAVLVIEHLHSSTQXXXXXXXXXXXXXXXELEEKEGPRDVGADGKGEGMGGREDVEDGREEEHQLSAEEPSSSQDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLLIAKGAGGLVIGRAGATIKALNEESGARIQLAAKDEAAGMVTGERVVTVSGPLKGVVKGVSRILEKLNEEPELARYQNLTTSYSRSTSAAHPLHPAYDIPT--YHTQSFG 449
V + I+LLVS AGC+IGKGGSTI + Q ++GARI+LS+NQ++FPGT DRI++ISG A L+ E L S T ED + E++ +L++ G G +IG+ G+ IK+L +ES A I+++ +D++ V +R+VT++G L+ ++ V IL KLNE+ + N Y+ A P+ Y IP+ Y+T ++G
Sbjct: 36 VTTYIRLLVSNTSAGCIIGKGGSTITEFQSQSGARIQLSRNQEFFPGTSDRIIMISGGFDEIMQAMQLIHEKLSSET------------------------------------------EDNNDVENKSKV-------------------------------------------RLIVPNGCCGGIIGKGGSMIKSLIDESQAGIKISPQDQSFPGV-NDRIVTLTGSLEEQMRAVYLILSKLNEDSHYSHTVNTPYPYAGVNFPAIPV--GYGIPSVPYNTMNYG 233
BLAST of NO16G02090 vs. NCBI_GenBank
Match: XP_013622064.1 (PREDICTED: protein BTR1 isoform X1 [Brassica oleracea var. oleracea] >XP_022554203.1 protein BTR1-like isoform X1 [Brassica napus]) HSP 1 Score: 94.0 bits (232), Expect = 2.100e-15 Identity = 81/298 (27.18%), Postives = 131/298 (43.96%), Query Frame = 0
Query: 162 SSDVPSAIKLLVSAGLAGCLIGKGGSTINDLQERTGARIKLSQNQDYFPGTQDRIVLISGDAQTCTHAAVLVIEHLHSSTQXXXXXXXXXXXXXXXELEEKEGPRDVGADGKGEGMGGREDVEDGREEEHQLSAEEPSSSQDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLLIAKGAGGLVIGRAGATIKALNEESGARIQLAAKDEAAGMVTGERVVTVSGPLKGVVKGVSRILEKLNEEPELARYQNLTTSYSRSTSAAHPLHP-AYDIPTYHTQSFGETQALFSPGG 459
S++ P+ I+ LVS AG +IGKGGSTI + Q ++GARI+LS+NQ++FPGT DRI++ISG + + L+++ LHS EL +EG DVE R +L++ + G +IG+ GATIK+ EES A I+++ D ++ +R+VT+SG + ++ + IL KL E+ ++ + SY+ + + HP AY +P+ T + + G
Sbjct: 24 SAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLHS------------------ELHAEEG----------------SDVEPRRR-------------------------------------------------LRLVVPNSSCGGIIGKGGATIKSFTEESKAGIKISPLDNTFYGLS-DRLVTLSGTFEEQMRAIDLILAKLTEDDHYSQNVHSPYSYAGLSHSGFHGHPYAYVLPSVATAGYNSANYAHNGSG 237
BLAST of NO16G02090 vs. NCBI_GenBank
Match: XP_005839430.1 (hypothetical protein GUITHDRAFT_101621 [Guillardia theta CCMP2712] >EKX52450.1 hypothetical protein GUITHDRAFT_101621 [Guillardia theta CCMP2712]) HSP 1 Score: 93.2 bits (230), Expect = 3.700e-15 Identity = 78/271 (28.78%), Postives = 113/271 (41.70%), Query Frame = 0
Query: 157 GGSIASSD-VPSAIKLLVSAGLAGCLIGKGGSTINDLQERTGARIKLSQNQDYFPGTQDRIVLISGDAQTCTHAAVLVIEHLHSSTQXXXXXXXXXXXXXXXELEEKEGPRDVGADGKGEGMGGREDVEDGREEEHQLSAEEPSSSQDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLLIAKGAGGLVIGRAGATIKALNEESGARIQLAAKDEAAGMVTGERVVTVSGPLKGVVKGVSRILEKLNEEPELARYQNLTTSYSRS 427
G I+S D A+K+L+ AG +IGK G+TIN +++ +GA++K+S N + FPGT DRIVLISG +T AA +VI ++ P DV A ++I A GLVIG+ G I +L EE+ A+IQL AKD+ A ER+VT+ G L V +I+ ++E+ + RY+NL T+Y S
Sbjct: 25 GDGISSGDETQMALKILIGNKSAGSVIGKAGATINSIKDTSGAKVKVSSNSETFPGTADRIVLISGKVETVLSAAKMVISEMYRDPNSGRV------------------PDDVNA----------------------------------------------------------------VMTVSIVIPAAACGLVIGKGGEKINSLREETQAKIQLQAKDKVAIPGLNERIVTIQGTLPQAQTAVEKIVHLIHEDGNI-RYENLGTNYGMS 212 HSP 2 Score: 60.5 bits (145), Expect = 2.600e-5 Identity = 31/80 (38.75%), Postives = 48/80 (60.00%), Query Frame = 0
Query: 663 NTTLTLQVPDKLIGSILGKSGATLKKFQSQSGARITISKRGEYAPGTQNRVVAIEGPVYCAEVARGMITTTVQQASMAPP 743
+T L L + D +G +LGK G LK++ S SGA I +S+RG+ PGT NR + I+G + A+ ++ +Q+A A P
Sbjct: 281 HTVLKLSITDDAVGPLLGKGGCNLKEYISVSGANIKVSQRGDTIPGTNNRYITIQGTAAAVQYAQLLV---LQKAPNATP 357
BLAST of NO16G02090 vs. NCBI_GenBank
Match: EXB39447.1 (RNA-binding protein Nova-1 [Morus notabilis]) HSP 1 Score: 93.2 bits (230), Expect = 3.700e-15 Identity = 81/299 (27.09%), Postives = 126/299 (42.14%), Query Frame = 0
Query: 160 IASSDVPSAIKLLVSAGLAGCLIGKGGSTINDLQERTGARIKLSQNQDYFPGTQDRIVLISGDAQTCTHAAVLVIEHLHSSTQXXXXXXXXXXXXXXXELEEKEGPRDVGADGKGEGMGGREDVEDGREEEHQLSAEEPSSSQDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLLIAKGAGGLVIGRAGATIKALNEESGARIQLAAKDEAAGMVTGERVVTVSGPLKGVVKGVSRILEKLNEEPELARYQNLTTSYSRSTSAAHPLHPAYDIPTYHTQSFGETQALFSPGG 459
+ S + P+ IK LVS AG +IGKGG+TI D Q ++GARI+LS+N ++FPGT DRI++ISG A LV+ L S Q EEE+ + + +L++ G+ G +IG+ G+TIK+ EES A I+++ +D + +R+VT++G L ++ + IL KL E+P + N SY S H + +P+ T S+ +T + P G
Sbjct: 43 LESMERPAYIKFLVSNAAAGSVIGKGGATITDFQSKSGARIQLSRNHEFFPGTTDRIIMISGAINEIIKAMELVLAKLLSELQ--------------------------------------------TEEENDVDPRK---------------------------------------KLRLVVPNGSCGGIIGKGGSTIKSFIEESQAGIKISPQDNNY-LGINDRLVTLTGTLDEQMRAIDLILSKLAEDPHYTQSMNAPFSYPGVFSGIHGTPYPHVLPSVATASYNQTG--YGPNG 255
BLAST of NO16G02090 vs. NCBI_GenBank
Match: OWM70255.1 (hypothetical protein CDL15_Pgr026105 [Punica granatum]) HSP 1 Score: 93.2 bits (230), Expect = 3.700e-15 Identity = 83/295 (28.14%), Postives = 130/295 (44.07%), Query Frame = 0
Query: 162 SSDVPSAIKLLVSAGLAGCLIGKGGSTINDLQERTGARIKLSQNQDYFPGTQDRIVLISGDAQTCTHAAVLVIEHLHSSTQXXXXXXXXXXXXXXXELEEKEGPRDVGADGKGEGMGGREDVEDGREEEHQLSAEEPSSSQDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLLIAKGAGGLVIGRAGATIKALNEESGARIQLAAKDEAAGMVTGERVVTVSGPLKGVVKGVSRILEKLNEEPELARYQNLTTSYSR-STSAAHPLHPAYDIPT-----YHTQSFGET 451
S + P+ I+ LVS AG +IGKGGSTI D Q ++GARI+LS+N ++FPGT DRI++ISG A LV+ L + E+ +EG + +P S +L++ G +IG+AGATIK+ EES A I+++++D +R+VTV+G L ++ + IL KL+E+P + N SY+ S+ H + Y++P+ Y+T ++G T
Sbjct: 30 SMEKPTYIRFLVSNAAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTSDRIIMISGSIDDILKAVELVLSKLMT------------------EIPAEEG-----------------------------NEVDPRSK------------------------------------VRLIVPNSFCGGIIGKAGATIKSFIEESQAGIKISSQDNNY-YGLNDRLVTVTGTLDEQMRAIDLILSKLSEDPHYPQSMNAPFSYAGVYFSSFHGIPYTYELPSVATAAYNTVNYGPT 240
BLAST of NO16G02090 vs. NCBI_GenBank
Match: XP_002293259.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED89720.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 92.8 bits (229), Expect = 4.800e-15 Identity = 87/312 (27.88%), Postives = 131/312 (41.99%), Query Frame = 0
Query: 167 SAIKLLVSAGLAGCLIGKGGSTINDLQERTGARIKLSQNQDYFPGTQDRIVLISGDAQTCTHAAVLVIEHLHSSTQXXXXXXXXXXXXXXXELEEKEGPRDVGADGKGEGMGGREDVEDGREEEHQLSAEEPSSSQDYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLLIAKGAGGLVIGRAGATIKALNEESGAR-IQLAAKDE---------------AAGMVTGERVVTVSGPLKGVVKGVSRILEKLNEEPELARYQNLTTSYSRSTSA---------AHPLHPAYDIPTYHTQSFGETQAL 454
+AIKLLVS +GC+IG+ G TI++LQ + RIKLSQ DY+PGTQDR+ LI G A +++ L L+ + + G S P + Q +L+ + G++IGR G+ IK++ EESG IQL+ K++ T ER++T+SG + VK V ILE++ PE++RY N+TTSYS+ +A +HP P+ PT H+ FG +++
Sbjct: 1 TAIKLLVSNNSSGCIIGRSGKTISELQADSSTRIKLSQGGDYYPGTQDRVCLIQGSLDNARVAVEMILLKL---------------------LQVESIVNEFG------------------------SVAMPFTIQ-------------------------------------VLVPTPSCGMLIGRGGSNIKSIKEESGVSFIQLSQKEQDNNHTANAIMSNTAINTAATTSERIITISGCFESCVKCVLLILEEMASNPEVSRYMNMTTSYSKVVAAQQSAATAQSSHP--PSLSAPT-HSIQFGIPESM 227 The following BLAST results are available for this feature:
BLAST of NO16G02090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G02090 ID=NO16G02090|Name=NO16G02090|organism=Nannochloropsis oceanica|type=gene|length=4136bpback to top protein sequence of NO16G02090.1 >NO16G02090.1-protein ID=NO16G02090.1-protein|Name=NO16G02090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=747bpback to top protein sequence of NO16G02090.2 >NO16G02090.2-protein ID=NO16G02090.2-protein|Name=NO16G02090.2|organism=Nannochloropsis oceanica|type=polypeptide|length=797bpback to top Synonyms
Publications
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