NO16G01990, NO16G01990 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G01990 vs. NCBI_GenBank
Match: EWM23891.1 (Protein of unknown function DUF501 [Nannochloropsis gaditana]) HSP 1 Score: 372.1 bits (954), Expect = 2.000e-99 Identity = 169/227 (74.45%), Postives = 197/227 (86.78%), Query Frame = 0 Query: 98 FEIPPFEPTPATAKDLACIEDRQLLHPITCAGGPRQLCSHGFPQAFVFHPSKTTLNSGMFRLCCPLLVKAVDEYEAKGALREWNKKLENSPEMQREFRRVNARHSAIRRSFVEPEHLAPYLEKMGKEGVEQILASGIAGVSPEKTEDLKCLHAHLADYLCTHDNFIGKEIYEYLERTRNVPVTGSSTCWQQCDSSFERTEDSWWYTPIKNKQKLRSKYHRRTARKQE 325 F+IPPF PTPA+ +D+ACIE RQL HPITCAGGPRQ C+HGFPQAF+FHP+KTT NSG+FRL CPLLVKAVDE+EA+G L+E+N+KLE SP MQREFRRVNARHSAIRR V+PE L Y+EK+G+ GVEQILASGIAGVSP KT DLKCLHAHLADYLCTHDN IG+E+YE+L R + V G++ CWQQC+ SFERT SWWY P+KNKQKLRS+YHRRTAR++E Sbjct: 84 FDIPPFRPTPASDEDIACIEQRQLGHPITCAGGPRQRCAHGFPQAFIFHPTKTTFNSGLFRLSCPLLVKAVDEFEAQGGLQEFNRKLEKSPAMQREFRRVNARHSAIRRGLVDPEGLRSYVEKLGEAGVEQILASGIAGVSPTKTGDLKCLHAHLADYLCTHDNAIGEEVYEHLRTNRQIEVEGNAECWQQCNLSFERTPSSWWYVPVKNKQKLRSRYHRRTARRRE 310
BLAST of NO16G01990 vs. NCBI_GenBank
Match: XP_005852636.1 (hypothetical protein NGA_0716200 [Nannochloropsis gaditana CCMP526] >EKU23197.1 hypothetical protein NGA_0716200 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 338.6 bits (867), Expect = 2.400e-89 Identity = 168/286 (58.74%), Postives = 197/286 (68.88%), Query Frame = 0 Query: 98 FEIPPFEPTPATAKDLACIEDRQLLHPITCAGGPRQLCSHGFPQAFVFHPSKTTLNSGMFRLCCPLLVKAVDEYEAK----------------------GALREWNKKLENSPEMQREFRRVNARHSAIRRSFVEPEHLAPYLEKMGKEGVEQILASGIAGVSPEKTEDLKCLHAHLADYLCT-------------------------------------HDNFIGKEIYEYLERTRNVPVTGSSTCWQQCDSSFERTEDSWWYTPIKNKQKLRSKYHRRTARKQE 325 F+IPPF PTPA+ +D+ACIE RQL HPITCAGGPRQ C+HGFPQAF+FHP+KTT NSG+FRL CPLLVKAVDE+EA+ G L+E+N+KLE SP MQREFRRVNARHSAIRR V+PE L Y+EK+G+ GVEQILASGIAGVSP KT DLKCLHAHLADYLCT +DN IG+E+YE+L R + V G++ CWQQC+ SFERT SWWY P+KNKQKLRS+YHRRTAR++E Sbjct: 103 FDIPPFRPTPASDEDIACIEQRQLGHPITCAGGPRQRCAHGFPQAFIFHPTKTTFNSGLFRLSCPLLVKAVDEFEAQVALCFRVGSPIHPFPSLPSLPPGGLQEFNRKLEKSPAMQREFRRVNARHSAIRRGLVDPEGLRSYVEKLGEAGVEQILASGIAGVSPTKTGDLKCLHAHLADYLCTRTGGGEGKGWGRGGAMLRAKEDVALAYRDISVALLSGYDNAIGEEVYEHLRTNRQIEVEGNAECWQQCNLSFERTPSSWWYVPVKNKQKLRSRYHRRTARRKE 388
BLAST of NO16G01990 vs. NCBI_GenBank
Match: CBN74650.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 161.8 bits (408), Expect = 4.100e-36 Identity = 89/201 (44.28%), Postives = 116/201 (57.71%), Query Frame = 0 Query: 135 CSHGFPQAFVFHPSKTTLNSGMFRLCCPLLVKAVDEYEAKGALREWNKKLENSPEMQREFRRVNARHSAIRRSFVEPEHLAPYLEKMGKEGVEQILASGIAGVSPEKTEDLKCLHAHLADYLC--THDNFIGKEIYEYLERTRNVPVTGSSTCWQQCDSSFERTEDSWWYTPIKNKQKLRSKYHRRTARKQELKGKEGEAE 334 C HGFPQAF F P ++SG+FRL CPLLV+A+D E +G + + N +L + ++ +F VN H +RR V P+ + E +GKEG + L SGI GV+P K D KCLHAH+AD L N IG+ E LE R V G C +QC+ E T DSW YTP KNKQKL+ + RR K + KE + E Sbjct: 8 CRHGFPQAFAFDPCGHKVSSGLFRLSCPLLVQAIDLLEDEGGIEDVNARLASEEGLREDFMAVNLAHGMLRRRLVTPDKMGLVEETIGKEGAGRFLDSGITGVTPGKVRDAKCLHAHVADALMRGRSANAIGRATLELLE-ARGVRTDGGDRCSEQCNYLVEETADSWRYTPQKNKQKLQMRKVRRKDMKACITKKERDRE 207
BLAST of NO16G01990 vs. NCBI_GenBank
Match: XP_009038309.1 (hypothetical protein AURANDRAFT_65195 [Aureococcus anophagefferens] >EGB07075.1 hypothetical protein AURANDRAFT_65195 [Aureococcus anophagefferens]) HSP 1 Score: 144.1 bits (362), Expect = 8.800e-31 Identity = 93/226 (41.15%), Postives = 124/226 (54.87%), Query Frame = 0 Query: 107 PATAKDLACIEDRQLLHPITCAGGP-RQLCSHGFPQAFVFHPSKTTLNSGMFRLCCPLLVKAVDEYEAKGALREWNKKL----ENSPEMQREFRRVNARHSAIRRSFVE-PEHLAPYLEKMGKEGVEQILASGIAGVSPEKTEDLKCLHAHLADYLCTHDNFIGKEIYEYLERTRNVPVTGSSTCWQQCDSSFERTEDSWWYTPIKNKQKLRSKYHRRTARKQELK 327 P A D+ IE QL H G P LC GFPQA + PS +G+ RL CP L +A+D +E A+R +K L ++ + + RVNARH+A RRS VE + +E++G++ + SGIAG+S K ED+KCLHA +AD L + DN +GK I + L R V V GS TC +QC + W YTP KNKQKL + RR QEL+ Sbjct: 40 PPAAPDVEAIEAHQLGHRTQTIGVPAASLCRRGFPQATLQDPSVHKFGAGLVRLTCPHLCEAIDAWERDDAVRTVSKALLVDGADASKHRDSLDRVNARHAATRRSLVEGTDAERRAVERLGEDAFSHAMGSGIAGISQGKLEDVKCLHAQVADELLSGDNALGKAILDGL-GARGVDVAGSPTCHEQCSG----CDGGWRYTPTKNKQKLWTT-KRRHKELQELR 259
BLAST of NO16G01990 vs. NCBI_GenBank
Match: XP_005776954.1 (hypothetical protein EMIHUDRAFT_463509 [Emiliania huxleyi CCMP1516] >EOD24525.1 hypothetical protein EMIHUDRAFT_463509 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 140.2 bits (352), Expect = 1.300e-29 Identity = 96/262 (36.64%), Postives = 130/262 (49.62%), Query Frame = 0 Query: 107 PATAKDLACIEDRQLLHPITCAGGPRQLCSHGFPQAFVFHP---------SKTTLNSGMFRLCCPLLVKAVDEYEAKGALREWNKKLEN---SPEMQREFRRVNARHSAIRRSFVEPEHLAPYLEK---------------------MGKEGV------------EQILASGIAGVSPEKTEDLKCLHAHLADYLC-THDNFIGKEIYEYLERTRNVPVTGSSTCWQQCDSSFERTEDSWWYTPIKNKQKLRSKYHRRTARK 323 P +A D+ +E + P A G R C HG PQAFV+ P + L+SG+FRL CPLLV+AVD +EA+GA+R+ +++ S + + N RH+ RR+ V L L++ K G E +L SG+AG SP K E +KCLHA LAD+LC H N +G+ I + R V V G S C QQCD R +WWYTP+KNKQKL ++ RR R+ Sbjct: 59 PVSASDMGALERQLGYRPYPLAVGAR--CVHGHPQAFVWDPLARFHGGRARRAPLDSGLFRLSCPLLVQAVDRWEAEGAVRQLQAEVDEGRVSECSRADLEEANRRHALARRALV-GNRLEEALQRSREAXXXXXXXXXXXXXXXXXXXKSGARPPRALSREELSELVLNSGVAGQSPSKPE-VKCLHAQLADHLCRDHSNPLGEAILSGV-AARGVAVHGDSQCHQQCDCGVAREAATWWYTPVKNKQKLFTRLERRKQRQ 315
BLAST of NO16G01990 vs. NCBI_GenBank
Match: XP_005793543.1 (hypothetical protein EMIHUDRAFT_462020 [Emiliania huxleyi CCMP1516] >EOD41114.1 hypothetical protein EMIHUDRAFT_462020 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 138.7 bits (348), Expect = 3.700e-29 Identity = 95/262 (36.26%), Postives = 129/262 (49.24%), Query Frame = 0 Query: 107 PATAKDLACIEDRQLLHPITCAGGPRQLCSHGFPQAFVFHP---------SKTTLNSGMFRLCCPLLVKAVDEYEAKGALREWNKKLEN---SPEMQREFRRVNARHSAIRRSFVEPEHLAPYLEK---------------------MGKEGV------------EQILASGIAGVSPEKTEDLKCLHAHLADYLC-THDNFIGKEIYEYLERTRNVPVTGSSTCWQQCDSSFERTEDSWWYTPIKNKQKLRSKYHRRTARK 323 P + D+ +E + P A G R C HG PQAFV+ P + L+SG+FRL CPLLV+AVD +EA+GA+R+ +++ S + + N RH+ RR+ V L L++ K G E +L SG+AG SP K E +KCLHA LAD+LC H N +G+ I + R V V G S C QQCD R +WWYTP+KNKQKL ++ RR R+ Sbjct: 59 PVSVSDMGALERQLGYRPYPLAVGAR--CVHGHPQAFVWDPLARFHGGRARRAPLDSGLFRLSCPLLVQAVDRWEAEGAVRQLQAEVDEGRVSECSRADLEEANRRHALARRALV-GSRLEEALQRSREAXXXXXXXXXXXXXXXXXXXKSGARPPRALSREELSELVLNSGVAGQSPSKPE-VKCLHAQLADHLCRDHSNPLGEAILSGV-AARGVAVHGDSQCHQQCDCGVAREAATWWYTPVKNKQKLFTRLERRKQRQ 315
BLAST of NO16G01990 vs. NCBI_GenBank
Match: EJK70270.1 (hypothetical protein THAOC_08386, partial [Thalassiosira oceanica]) HSP 1 Score: 131.3 bits (329), Expect = 5.900e-27 Identity = 73/209 (34.93%), Postives = 113/209 (54.07%), Query Frame = 0 Query: 135 CSHGFPQAFVFHPSKTTLN-SGMFRLCCPLLVKAVDEYEAKGALR---EW---NKKLENSPEMQREFRRVNARHSAIRRSFVEPEHLAPYLEKMGKEGVEQILASGIAGVSPEKTEDLKCLHAHLADYLCTHD--------------NFIGKEIYEYLERTRNVPVTGSSTCWQQCDSSFERTEDSWWYTPIKNKQKLRSKYHRRTARK 323 C HG+PQ+F FHP+K SG+FRL CPLLV+A+D++E +G +R +W + + N+ Q F N +R+ + L+ +++G+ E+ L SGIAG+ +T ++KC+HAH+AD+LC N IG+ L R + G+ CWQQC+ + +R + W Y P KN+QKL++ RR K Sbjct: 688 CLHGYPQSFGFHPTKGPKPVSGLFRLSCPLLVEAIDQWEGEGGVRQMTDWLRSDDRFHNASRKQDGFETANRIQKKVRKELARGD-LSYLSKRLGEFNSERFLDSGIAGIPSSQTFNVKCIHAHVADHLCRRSRDLDSADIENADRGNIIGEHALRIL-GDRGTEICGNEVCWQQCNCNRKRVDSDWSYRPKKNRQKLKTTSERRHLSK 894
BLAST of NO16G01990 vs. NCBI_GenBank
Match: PSP16642.1 (hypothetical protein BRC58_08515 [Cyanobacteria bacterium QS_8_64_29]) HSP 1 Score: 91.3 bits (225), Expect = 6.800e-15 Identity = 56/166 (33.73%), Postives = 93/166 (56.02%), Query Frame = 0 Query: 130 GPRQLCSHGFPQAFVFHP----SKTTLNSGMFRLCCPLLVKAVDEYEAKGALREWNKKLENSPEMQREFRRVNARHSAIRRSFVEPEHLAPYLEKMGKEGVEQ--ILASGIAGVSPEKTEDLKCLHAHLADYLCTHDNFIGKEIYEYLERTRNVPVTGSSTCWQQC 290 G + C G+PQA V P + ++ S + RL CPLLV AV+E E + + +++++ P++ RE + R +A R + P LE+ + + + +G++G+S +T+ +KCLHAHLADYL DN IG+++ L R R +P+ G+ CW+ C Sbjct: 53 GVARRCCWGYPQAVVNAPLLVGPRLSVASTLTRLTCPLLVAAVNELEHEKQIERYDERVRRDPKLWRELEATH-RSAARDRVALLPAEWRQRLERDPQLAHFRWVLYETGLSGIS--RTDHIKCLHAHLADYLGRTDNPIGRKVAATL-RARGIPLEGTRECWRYC 214
BLAST of NO16G01990 vs. NCBI_GenBank
Match: WP_011994782.1 (DUF501 domain-containing protein [Fervidobacterium nodosum] >ABS61491.1 protein of unknown function DUF501 [Fervidobacterium nodosum Rt17-B1] >PHJ13528.1 hypothetical protein IM41_05810 [Fervidobacterium sp. SC_NGM5_G05]) HSP 1 Score: 78.2 bits (191), Expect = 5.900e-11 Identity = 54/168 (32.14%), Postives = 83/168 (49.40%), Query Frame = 0 Query: 111 KDLACIEDRQLLHPITCAGGPRQLCSHGFPQAFVFHPSKT-TLNSGMFRLCCPLLVKAVDEYEAKGALREWNKKLENSPEMQREFRRVNARHSAIRRS----FVEPEHLAPYLEKMGKEGVEQILASGIAGVSPEKTEDLKCLHAHLADYLCTHDNFIGKEIYEYLER 274 KDL I+ +QL I + CS+GFP + +P + T + L CP LVK V E KG + ++ K++ E R + NA S I++ E + A +LE +G G++ +++KCLH HLADYL +N IGKE+Y+ +E+ Sbjct: 7 KDLKVIQ-KQLGREINNVIAVCKYCSYGFPVVILSYPIRNGTPFPTIHYLTCPHLVKEVSRLEEKGYISKFEIKIKEDSEFSRAYE--NAHFSVIQKRLNLLMEEDKKWAKHLESVGTGGIKDF-------------KNVKCLHLHLADYLAGIENPIGKEVYDLIEK 158
BLAST of NO16G01990 vs. NCBI_GenBank
Match: WP_014297442.1 (MULTISPECIES: DUF501 domain-containing protein [Marinitoga] >AEX86372.1 hypothetical protein Marpi_1996 [Marinitoga piezophila KA3] >APT76766.1 hypothetical protein LN42_10560 [Marinitoga sp. 1137]) HSP 1 Score: 75.9 bits (185), Expect = 2.900e-10 Identity = 52/172 (30.23%), Postives = 84/172 (48.84%), Query Frame = 0 Query: 109 TAKDLACIEDRQLLHPITCAGGPRQLCSHGFPQAFVFHPSKTTLN-SGMFRLCCPLLVKAVDEYEAKGALREWNKKLENSPEMQREFRRVNARHSAIRRSFVEPEHLAPYLEKMGKEGVEQILAS-GIAGVSPEKTEDLKCLHAHLADYLCTHDNFIGKEIYEYLERTRNVP 279 T KDL IE + P P++ CS+G+P +P K ++ L CP L+KAV + E+ G +++W ++L+N+ E+ + +NA E E L+ +E ++ L GI G+ E +KCLH HLA YL N IG+ ++ +E+ P Sbjct: 7 TEKDLNIIEKQINRKPHKVIDIPKR-CSYGYPIVIKSYPVKDNEPFPTLYWLTCPHLIKAVGKLESLGKIKKWEEELKNNEELLNSY--LNAHKE-------EQEERLKILDNSTEEWIKNALKKVGIGGI--RNFETIKCLHLHLASYLGGTPNPIGERVWREIEKEAECP 166 The following BLAST results are available for this feature:
BLAST of NO16G01990 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G01990 ID=NO16G01990|Name=NO16G01990|organism=Nannochloropsis oceanica|type=gene|length=1567bpback to top protein sequence of NO16G01990.1 >NO16G01990.1-protein ID=NO16G01990.1-protein|Name=NO16G01990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=363bpback to top Synonyms
Publications
|