NO16G01910, NO16G01910 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G01910 vs. NCBI_GenBank
Match: EWM23887.1 (sulfate large subunit [Nannochloropsis gaditana]) HSP 1 Score: 339.0 bits (868), Expect = 6.100e-89 Identity = 183/213 (85.92%), Postives = 195/213 (91.55%), Query Frame = 0
Query: 952 WSGLFRSGGRTTLSASRSGTLRPMLASLSPEQEAKRYQLHRQVEELDEIIRSKTDAKRAMEKEIEALLSQKRGLQMEVNTMAPSLEIASESPLRSLVKACSWRLVAALITLSTSLFFSRDAKMAASIVSSDFLSKAGTMYAGERLWNKVSWGKEAKAGDAASRSIIKAFAWRAFAMVNTLVISIFFAKSVKIAGQIASTDTIIKTSLYVVHER 1165
W+GLFR G RS RPMLASL+PEQE K YQ+ RQVE+LDE+IR+KTDAKRA+EKE+E LL+QKR LQMEVNTMAPSLEIASESPLRSLVKACSWRLVAALITLSTSLFFSRDAKMAASIVSSDFLSKAGTMY GERLWNKVSWGKEAKAGDAASRSI+KAFAWRAFAMVNTL+ISIFFAKSVK+AGQIASTDTIIKTSLYVVHER
Sbjct: 86 WNGLFRRPGPV-----RSSPTRPMLASLTPEQEVKNYQIRRQVEDLDELIRTKTDAKRAIEKEVEGLLAQKRSLQMEVNTMAPSLEIASESPLRSLVKACSWRLVAALITLSTSLFFSRDAKMAASIVSSDFLSKAGTMYLGERLWNKVSWGKEAKAGDAASRSIMKAFAWRAFAMVNTLIISIFFAKSVKVAGQIASTDTIIKTSLYVVHER 293
BLAST of NO16G01910 vs. NCBI_GenBank
Match: CBN75012.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 150.6 bits (379), Expect = 3.100e-32 Identity = 75/148 (50.68%), Postives = 103/148 (69.59%), Query Frame = 0
Query: 1032 MAPSLEIASESPLRSLVKACSWRLVAALITLSTSLFFSRDAKMAASIVSSDFLSKAGTMYAGERLWNKVSWGKEAKAGDAASRSIIKAFAWRAFAMVNTLVISIFFAKSVKIAGQIASTDTIIKTSLYVVHERIWSKIDWGRSYDVEY 1180
+ P+L + ES RS VKA WRL A ++TL + L FS A SIV SDF++K+G M+AGERLWNKV WG++ K+GD+ RS+ KA WR FA NTL+ +F AK + +A +IA TDT+ KT+L+ ++ER W+KI WG+ Y+ EY
Sbjct: 112 LRPAL-VYGESATRSFVKALVWRLTAGVVTLVSGLVFSGSLATAMSIVGSDFVTKSGFMFAGERLWNKVKWGQD-KSGDSTKRSLAKAVLWRVFAASNTLICGVFLAKDLSVASKIAGTDTVFKTALFFLNERAWTKISWGKEYEPEY 257
BLAST of NO16G01910 vs. NCBI_GenBank
Match: OEU10107.1 (hypothetical protein FRACYDRAFT_220344 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 140.2 bits (352), Expect = 4.100e-29 Identity = 74/142 (52.11%), Postives = 99/142 (69.72%), Query Frame = 0
Query: 1040 SESPLRSLVKACSWRLVAALITLSTSLFFSRDAKMAASIVSSDFLSKAGTMYAGERLWNKVSWGKEAKAGDAASRSIIKAFAWRAFAMVNTLVISIFFAKSVKIAGQIASTDTIIKTSLYVVHERIWSKIDWGRSYDVEYNI 1182
SE+ RS VKA WR++A +T TSL FS K A +IV SDFLSKA TM+ GERL NK + G+E+ A D A RS++KA WR FA+ NTL ++IF AK + +A +IA +D I KT L V+ER+W+KI+WG+ Y V++ I
Sbjct: 45 SETTARSAVKALMWRVIAGSVTFITSLRFSGSMKTALTIVGSDFLSKAFTMFIGERLMNKSNAGRESGA-DGAGRSLMKALVWRLFAICNTLTMAIFIAKDITMASKIAGSDAIFKTGLMFVYERVWAKIEWGKEYQVDFFI 185
BLAST of NO16G01910 vs. NCBI_GenBank
Match: GAX09379.1 (hypothetical protein FisN_6Lh247 [Fistulifera solaris]) HSP 1 Score: 138.7 bits (348), Expect = 1.200e-28 Identity = 89/226 (39.38%), Postives = 134/226 (59.29%), Query Frame = 0
Query: 963 TLSASRSGTLRPMLA--SLSPEQEAKRYQLHRQVEELDEIIRSK----TDAKRAMEKEIEALLSQKRGLQMEVNTMAPSLEIA-SESPLRSLVKACSWRLVAALITLSTSLFFSRDAKMAASIVSSDFLSKAGTMYAGERLWNKVSWGKEAKAGDAASRSIIKAFAWRAFAMVNTLVISIFFAKSVKIAGQIASTDTIIKTSLYVVHERIWSKIDWGRSYDVEYNI 1182
T+ AS S T + L+ S S + E R + RQ+E+ + ++ + + E +EAL S+K P + SE+ LRS+VK+ WR+VA +T T+L FS + A +V+SDF SK+ TM+ GERL NK G++ K D A RS+ KA WR FA+VNTL ++IF + + IAG+IASTD + KT+L +ER+W++++WG+ Y VE+ I
Sbjct: 25 TMMASSSVTKKNWLSVFSSSKDSELSRDGIMRQLEKQEADLKKRRLAAMEELSKYEANLEALQSKKAEYMASSQIAEPPAGGSFSETALRSVVKSFCWRIVAGSVTFITTLQFSGSLQTALKVVASDFFSKSVTMFIGERLMNKSQVGRK-KGSDDAGRSLAKALIWRLFAIVNTLAVAIFVSHDLSIAGKIASTDAVFKTALMYFYERVWARVEWGKEYIVEFTI 249
BLAST of NO16G01910 vs. NCBI_GenBank
Match: GAX22001.1 (hypothetical protein FisN_6Hh247 [Fistulifera solaris]) HSP 1 Score: 134.0 bits (336), Expect = 3.000e-27 Identity = 89/228 (39.04%), Postives = 132/228 (57.89%), Query Frame = 0
Query: 961 RTTLSASRSGTLRPMLA--SLSPEQEAKRYQLHRQVEELDEIIRSKTDA----KRAMEKEIEALLSQKRGLQMEVNTMAPSLEIA-SESPLRSLVKACSWRLVAALITLSTSLFFSRDAKMAASIVSSDFLSKAGTMYAGERLWNKVSWGKEAKAGDAASRSIIKAFAWRAFAMVNTLVISIFFAKSVKIAGQIASTDTIIKTSLYVVHERIWSKIDWGRSYDVEYNI 1182
R T+ AS S T + + S S + E R + RQ+E+ + ++ + A EAL S+K P + SE+ LRS+VK+ WR+VA +T T+L FS + A +V+SDF SK+ TM+ GERL NK G++ K D A RS+ KA WR FA+VNTL ++IF + + IAG+IASTD + KT+L +ER+W++++WG+ Y VE+ I
Sbjct: 25 RMTMMASSSVTKKNWFSVFSSSKDSELSRDGVMRQLEKQEADLQKRRLAAXXXXXXXXXXXEALQSKKAEYMASSQIAEPPAGGSFSETALRSVVKSFCWRIVAGSVTFITTLQFSGSLQTALKVVASDFFSKSVTMFIGERLMNKSQVGRK-KGSDDAGRSLAKALIWRLFAIVNTLAVAIFVSHDLSIAGKIASTDAVFKTALMYFYERVWARVEWGKEYIVEFTI 251
BLAST of NO16G01910 vs. NCBI_GenBank
Match: EJK62229.1 (hypothetical protein THAOC_17166 [Thalassiosira oceanica]) HSP 1 Score: 131.0 bits (328), Expect = 2.500e-26 Identity = 78/193 (40.41%), Postives = 113/193 (58.55%), Query Frame = 0
Query: 989 QLHRQVEELDEIIRSKTDAKRAMEKEIEALLSQKRGLQMEVNTMAPSLEIASESPLRSLVKACSWRLVAALITLSTSLFFSRDAKMAASIVSSDFLSKAGTMYAGERLWNKVSWGKEAKAGDAASRSIIKAFAWRAFAMVNTLVISIFFAKSVKIAGQIASTDTIIKTSLYVVHERIWSKIDWGRSYDVEYNI 1182
++ + E + R +A+ +EK + G + +T A + SE+ RSLVK+ WR++A +T TSL FS + A SIV SDF SKA TM+ GERL NK G++ A D RS+ KA WR FA+ NTL +S F AK + +A +IA +D I KT L +ER+W+KI+WG+ Y +E++I
Sbjct: 64 KIQKYESEQERFARKAAEAQSQIEKFKASRQKYLNGGSIGGDTEAANF---SETTQRSLVKSMMWRVIAGSVTFFTSLRFSGNISTALSIVGSDFFSKAATMFVGERLMNKSQAGRKGGADD-LGRSLAKALLWRLFAIANTLTMSYFIAKDLSMASKIAGSDAIFKTGLMFAYERVWAKIEWGKEYIIEFSI 252
BLAST of NO16G01910 vs. NCBI_GenBank
Match: XP_002177892.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50706.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 130.2 bits (326), Expect = 4.300e-26 Identity = 85/223 (38.12%), Postives = 127/223 (56.95%), Query Frame = 0
Query: 963 TLSASRSGTLRPMLASLSPEQEAKRYQLHRQVEELDEIIRSKTDAKRAME---KEIEALLSQK-RGLQMEVNTMAPSLEIASESPLRSLVKACSWRLVAALITLSTSLFFSRDAKMAASIVSSDFLSKAGTMYAGERLWNKVSWGKEAKAGDAASRSIIKAFAWRAFAMVNTLVISIFFAKSVKIAGQIASTDTIIKTSLYVVHERIWSKIDWGRSYDVEYNI 1182
TL +R R M + + + + +EL ++++ K +A +E K +E L SQK L A + SE+ LRS VKA WR++A IT +T+L FS K A +V+ DF SKA TM+ GERL NK G++ K D RS KA WR FA+ NTL +++F +K + +A +IASTD + KT+L +ER+W+K+ WG+ Y +E++I
Sbjct: 28 TLPVARLANTRSMSTAAISDSNDETVLKQFEKKEL-QLLKRKQEALAKLEEYTKTLENLQSQKAEYLAAGQVADASAAGSFSETALRSAVKAFLWRIIAGSITFATTLQFSGSVKTAMQVVAGDFFSKAFTMFIGERLMNKSQAGRK-KGADDVGRSFAKALIWRLFAICNTLTMAVFISKDLSVASKIASTDAVFKTALMFFYERVWAKVKWGKDYLLEFSI 248
BLAST of NO16G01910 vs. NCBI_GenBank
Match: EWM23882.1 (Transcription factor IIIC, putative zinc-finger [Nannochloropsis gaditana]) HSP 1 Score: 130.2 bits (326), Expect = 4.300e-26 Identity = 68/168 (40.48%), Postives = 89/168 (52.98%), Query Frame = 0
Query: 744 DKPTCIWQALHAICTHMSRKFFQGVPHLMEEYARVLLVARAHVTATYVDRSFEALIVRGRGGEVXXXXXXXXXXXXXLTATEKRIARQMAHWVQARLTFFVEVDRQRRRGGGNWEEMVGELMRLSALTEG-----EEEEVETCVVCGGGVPLDPMMGLMAICEQGHVL 907
D+P +W ALHA+CTHMSRKFF +EEYAR+LL+AR H+TA YVDRSFE L+ G + E++IAR M WV+A L F E+DR + GG WE + G++ LS EG CV+C G + D M C +GH +
Sbjct: 2 DRPPSVWHALHAMCTHMSRKFFGEAIGYLEEYARLLLMARIHLTAAYVDRSFEKLLAEEGG------------RRRIFSRAERQIARAMTRWVRANLVFLQELDRPQGSGGVTWESLAGQVEALSGQPEGXXXXXXXXXXXXCVICDGAMLSDEMRNFTGTCVRGHAV 157
BLAST of NO16G01910 vs. NCBI_GenBank
Match: XP_002291214.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91321.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 129.4 bits (324), Expect = 7.300e-26 Identity = 80/203 (39.41%), Postives = 119/203 (58.62%), Query Frame = 0
Query: 981 PEQEAKRYQLHRQVEELDEIIRSKTDAKRAMEKEIEALLSQKRGLQMEVNTMAPSLEIA--SESPLRSLVKACSWRLVAALITLSTSLFFSRDAKMAASIVSSDFLSKAGTMYAGERLWNKVSWGKEAKAGDAASRSIIKAFAWRAFAMVNTLVISIFFAKSVKIAGQIASTDTIIKTSLYVVHERIWSKIDWGRSYDVEYNI 1182
P EA Q+ ++++ ++ + D + + E+E K+ ++ ++M E A +E+ RSLVK+ WR++A +T TSL FS A SIV SDF SKA TM+ GERL NK G++ A D RS+ KA WR FA+ NTL +S AK+ K+A +IA +D I KT L +ER W+KI+WG+ Y +E++I
Sbjct: 782 PVNEAMIRQIDQKIQNYEKKQQKYLDKLNSAQAELEKFKETKQ-RYLQGDSMGGEGESAAFTETTARSLVKSMMWRVIAGSVTFFTSLRFSGSMSTALSIVGSDFFSKAATMFIGERLMNKSQAGRKGGADD-VGRSLAKALLWRLFAICNTLTMSFLIAKNFKMASKIAGSDAIFKTGLMFFYERAWAKIEWGKEYIIEFSI 982
BLAST of NO16G01910 vs. NCBI_GenBank
Match: OGF63439.1 (hypothetical protein A2Y62_07325 [Candidatus Fischerbacteria bacterium RBG_13_37_8]) HSP 1 Score: 90.5 bits (223), Expect = 3.800e-14 Identity = 48/136 (35.29%), Postives = 76/136 (55.88%), Query Frame = 0
Query: 1041 ESPLRSLVKACSWRLVAALITLSTSLFFSRDAKMAASIVSSDFLSKAGTMYAGERLWNKVSWGKEAKAGDAASRSIIKAFAWRAFAMVNTLVISIFFAKSVKIAGQIASTDTIIKTSLYVVHERIWSKIDWGRSYD 1177
+S RSLVK SWR++A + T + FF + +A I ++ SK Y ER W+ +SWG+E+ + RSI K WR ++T++IS ++ ++ + + T+ K S + +HERIWS I WGR Y+
Sbjct: 3 DSKKRSLVKGLSWRILATMDTFFIAYFFFGEIHLALPIAITEVFSKILLYYLHERGWDNISWGRESHM-PSHLRSIAKGATWRFIGSLDTIIISFAYSGNMSASFSVGLTEVATKISFFYIHERIWSHISWGRIYE 137 The following BLAST results are available for this feature:
BLAST of NO16G01910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G01910 ID=NO16G01910|Name=NO16G01910|organism=Nannochloropsis oceanica|type=gene|length=5904bpback to top protein sequence of NO16G01910.1 >NO16G01910.1-protein ID=NO16G01910.1-protein|Name=NO16G01910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1182bpback to top Synonyms
Publications
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