NO16G01900, NO16G01900 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G01900 vs. NCBI_GenBank
Match: XP_005853528.1 (lysine decarboxylase-like protein [Nannochloropsis gaditana CCMP526] >EKU22833.1 lysine decarboxylase-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 436.0 bits (1120), Expect = 7.600e-119 Identity = 209/245 (85.31%), Postives = 228/245 (93.06%), Query Frame = 0 Query: 1 MRVCVFASSSSLTPEPYLKVARELGEEIAKAGYLCINGGGKNGCMGALNEGARASGGKIKTVIHGKWIVDKMEFEDVDELVVAQGNNLQERKRLLWETCDCVVVLPGGTGTWDELMEVACHNSVGFGKIPITVINVDGFYDGIIEQIARAASDKILYATPDDTMHVETTVKGALSWSALKVKALKEAGEATGSDAVVLQARTTTFIFQRRHSFLVGVFVGFVGAVLTVGEAALLSQMVKKRLAGR 246 MRVCVFASSSSLTPEPYLKVARELGEEIAKA YLCINGGGKNGCMGALNEGARA GGKIKTVIHGKW++DKMEFEDVDELV+AQGNNLQERKRLLWETCDCV+VLPGGTGTWDELMEVACHNSVGFGKIPIT++NVDGFYDGII+Q+ARAA DKILYATPDDTMHVETT +GALSW A +V+A +EAG A G DA+VLQ RT TFIFQRRHSFLVG+ +GF GA+LTVGEAALL++ +KR AGR Sbjct: 1 MRVCVFASSSSLTPEPYLKVARELGEEIAKAQYLCINGGGKNGCMGALNEGARAGGGKIKTVIHGKWVIDKMEFEDVDELVIAQGNNLQERKRLLWETCDCVIVLPGGTGTWDELMEVACHNSVGFGKIPITLVNVDGFYDGIIQQVARAARDKILYATPDDTMHVETTAQGALSWCAKRVQAQREAGGALGGDALVLQGRTRTFIFQRRHSFLVGLVLGFAGAILTVGEAALLNRFWRKRQAGR 245
BLAST of NO16G01900 vs. NCBI_GenBank
Match: EWM23899.1 (tigr00730 family protein [Nannochloropsis gaditana]) HSP 1 Score: 436.0 bits (1120), Expect = 7.600e-119 Identity = 209/245 (85.31%), Postives = 228/245 (93.06%), Query Frame = 0 Query: 1 MRVCVFASSSSLTPEPYLKVARELGEEIAKAGYLCINGGGKNGCMGALNEGARASGGKIKTVIHGKWIVDKMEFEDVDELVVAQGNNLQERKRLLWETCDCVVVLPGGTGTWDELMEVACHNSVGFGKIPITVINVDGFYDGIIEQIARAASDKILYATPDDTMHVETTVKGALSWSALKVKALKEAGEATGSDAVVLQARTTTFIFQRRHSFLVGVFVGFVGAVLTVGEAALLSQMVKKRLAGR 246 MRVCVFASSSSLTPEPYLKVARELGEEIAKA YLCINGGGKNGCMGALNEGARA GGKIKTVIHGKW++DKMEFEDVDELV+AQGNNLQERKRLLWETCDCV+VLPGGTGTWDELMEVACHNSVGFGKIPIT++NVDGFYDGII+Q+ARAA DKILYATPDDTMHVETT +GALSW A +V+A +EAG A G DA+VLQ RT TFIFQRRHSFLVG+ +GF GA+LTVGEAALL++ +KR AGR Sbjct: 1 MRVCVFASSSSLTPEPYLKVARELGEEIAKAQYLCINGGGKNGCMGALNEGARAGGGKIKTVIHGKWVIDKMEFEDVDELVIAQGNNLQERKRLLWETCDCVIVLPGGTGTWDELMEVACHNSVGFGKIPITLVNVDGFYDGIIQQVARAARDKILYATPDDTMHVETTAQGALSWCAKRVQAQREAGGALGGDALVLQGRTRTFIFQRRHSFLVGLVLGFAGAILTVGEAALLNRFWRKRQAGR 245
BLAST of NO16G01900 vs. NCBI_GenBank
Match: XP_005842247.1 (hypothetical protein GUITHDRAFT_159078 [Guillardia theta CCMP2712] >EKX55267.1 hypothetical protein GUITHDRAFT_159078 [Guillardia theta CCMP2712]) HSP 1 Score: 186.0 bits (471), Expect = 1.400e-43 Identity = 88/177 (49.72%), Postives = 121/177 (68.36%), Query Frame = 0 Query: 1 MRVCVFASSSSLTPEPYLKVARELGEEIAKAGYLCINGGGKNGCMGALNEGARASGGKIKTVIHGKWIVDKMEFEDVDELVVAQGNNLQERKRLLWETCDCVVVLPGGTGTWDELMEVACHNSVGFGKIPITVINVDGFYDGIIEQIARAASDKILYATPDDTMHVETTVKGALSWS 178 MRVCV SSSS TP+ YL ++ELG +A+ G++C+NGGGK GCMGALN+G +GG VIH ++VD E + +++VA+G+ L ERK+LL E DCV+ LPGG GTWDEL EV S+GF IPI VIN +GFYD +A+A DK++Y P+ + E++V AL+++ Sbjct: 1 MRVCVCGSSSSSTPKAYLDASKELGRLLAERGHICVNGGGKTGCMGALNDGCIHAGGTTIGVIHEMFVVDGEEHTGLTQMIVARGDCLAERKKLLVEGADCVIALPGGVGTWDELWEVVAEVSLGFKNIPIVVINTNGFYDSFKAMLAKAMEDKLIYKGPETLVRFESSVVAALNFA 177
BLAST of NO16G01900 vs. NCBI_GenBank
Match: CBN74203.1 (putative decarboxylase family protein, lysine decarboxylase? [Ectocarpus siliculosus]) HSP 1 Score: 183.3 bits (464), Expect = 8.900e-43 Identity = 86/180 (47.78%), Postives = 114/180 (63.33%), Query Frame = 0 Query: 4 CVFASSSSLTPEPYLKVARELGEEIAKAGYLCINGGGKNGCMGALNEGARASGGKIKTVIHGKWIVDKMEFEDVDELVVAQGNNLQERKRLLWETCDCVVVLPGGTGTWDELMEVACHNSVGFGKIPITVINVDGFYDGIIEQIARAASDKILYATPDDTMHVETTVKGALSWSALKVKA 184 CV+ SSS TP+PYL VAR+LG +A G+ C+NG G+ GCMGALN+G G+++ VIH WIVD E V +L V G LQERKR+L E DC+V LPGG GTWDEL E+ C +G +PI V++V+ FY G Q RA +D++LYA D +H E+ A+ W ++ A Sbjct: 12 CVYGSSSVNTPQPYLDVARKLGNLLADGGHTCVNGAGRAGCMGALNDGVTERCGRVRGVIHEMWIVDASEHPQVKDLRVVGGQGLQERKRMLMEGADCIVALPGGLGTWDELWEMVCLKGIGLCDVPICVLDVEDFYAGFKVQTKRAQADRLLYADMDKLLHFESDPAKAIEWCVSQLGA 191
BLAST of NO16G01900 vs. NCBI_GenBank
Match: XP_002291575.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91682.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 177.6 bits (449), Expect = 4.900e-41 Identity = 103/247 (41.70%), Postives = 140/247 (56.68%), Query Frame = 0 Query: 1 MRVCVFASSSSLTPEPYLKVARELGEEIAKAGYLCINGGGKNGCMGALNEGARASGGKIKTVIHGKWIVDKMEFED-----------VDELVVAQGNNLQERKRLLWETCDCVVVLPGGTGTWDELMEVACHNSVGFGKIPITVINVDGFYDGIIEQIARAASDKILYATPDDTMHVETTVKGALSW--SALKVKALKEAGEATGSDAVVLQARTTTFIFQRRHSFLVG-VFVGFVGAVLTVGEAAL 234 +R+C + SSSS TPE Y A ELG +A+ G+ C+NG G GCM A+N+GA G+I VIH +IVD ++ + EL+VA+G++LQERKRLL + D +VVLPGG GTWDEL E+AC VGF +PI +NVDG+YD + + RA SD++LY P D +H E T + A+ W L KE + T +T T + +R S + G F GF V G+ L Sbjct: 8 LRICCYGSSSSKTPEKYTNAAYELGIILARRGHTCVNGAGSAGCMAAMNQGASDGNGRIVGVIHEMFIVDGSDWLEGSQHTFANNGGKHELLVAKGDDLQERKRLLVKGADGLVVLPGGPGTWDELWEMACARHVGFHNMPIVCVNVDGYYDTFMSILQRAHSDELLYKEPQDIVHFEETPEAAVKWIEDYLADPRNKEKQQKT--------IKTRTSVLKRLQSNVSGSAFAGFQRMVSFFGDEGL 246
BLAST of NO16G01900 vs. NCBI_GenBank
Match: EJK70908.1 (hypothetical protein THAOC_07697, partial [Thalassiosira oceanica]) HSP 1 Score: 174.5 bits (441), Expect = 4.100e-40 Identity = 90/201 (44.78%), Postives = 122/201 (60.70%), Query Frame = 0 Query: 1 MRVCVFASSSSLTPEPYLKVARELGEEIAKAGYLCINGGGKNGCMGALNEGARASGGKIKTVIHGKWIVDKMEF---------EDVDELVVAQGNNLQERKRLLWETCDCVVVLPGGTGTWDELMEVACHNSVGFGKIPITVINVDGFYDGIIEQIARAASDKILYATPDDTMHVETTVKGALSWSALKVKALKEAGEATG 193 +RVC + SSSS TP Y A +LG +A+ G+ C+NG G +GCM A+N GA SGG+I VIH K++VD ++ EL++A GN+LQERKRLL D +VVLPGG GTWDEL E+AC +GF +PI +NVDG+YD + +A+ D +LY+ P +H E T + A+ W V+A G TG Sbjct: 28 LRVCCYGSSSSRTPARYTDAAYDLGSILARRGHTCVNGAGSSGCMAAMNSGASDSGGRIVGVIHEKFVVDGSDWLEGAHSVFGRGGAELLLATGNDLQERKRLLVRDADALVVLPGGPGTWDELWEMACAGHLGFHSMPIVCVNVDGYYDDFRNMLDKASKDGLLYSEPGAIVHFEDTPEEAVGW----VEAQVGDGRITG 224
BLAST of NO16G01900 vs. NCBI_GenBank
Match: XP_009042775.1 (hypothetical protein AURANDRAFT_35169 [Aureococcus anophagefferens] >EGB02527.1 hypothetical protein AURANDRAFT_35169 [Aureococcus anophagefferens]) HSP 1 Score: 167.2 bits (422), Expect = 6.600e-38 Identity = 80/177 (45.20%), Postives = 117/177 (66.10%), Query Frame = 0 Query: 1 MRVCVFASSSSLTPEPYLKVARELGEEIAKAGYLCINGGGKNGCMGALNEGARASGGKIKTVIHGKWIVDKMEFEDVDELVVAQGNNLQERKRLLWETCDCVVVLPGGTGTWDELMEVACHNSVGF-GKIPITVINVDGFYDGIIEQIARAASDKILYATPDDTMHVETTVKGALSW 177 MR+CV+ASSS+ T + ++ R LG IA G++ +NGGG+ G MGALNEG RA+GG+I VIH +++VD EF +++VVA G++L ERKRLL E CD ++V+PGG GT DEL + A +GF P+ ++N+DG+YD + Q+ RA + + P + +H V AL+W Sbjct: 1 MRICVYASSSTRTSDRFMAAGRALGAAIAAGGHVLVNGGGRAGGMGALNEGCRAAGGRIVCVIHERFVVDGEEFAGAEKMVVAGGDDLGERKRLLVEHCDALIVMPGGVGTLDELWDAASLQQLGFKTSRPVVLVNLDGYYDATLAQLRRAHDEGLTSKPPAEILHAVPDVGAALAW 177
BLAST of NO16G01900 vs. NCBI_GenBank
Match: GAX14978.1 (uncharacterized protein FisN_12Lh326 [Fistulifera solaris]) HSP 1 Score: 162.9 bits (411), Expect = 1.200e-36 Identity = 85/202 (42.08%), Postives = 114/202 (56.44%), Query Frame = 0 Query: 1 MRVCVFASSSSLTPEPYLKVARELGEEIAKAGYLCINGGGKNGCMGALNEGARASGGKIKTVIHGKWIVDKMEFED-------------------------VDELVVAQGNNLQERKRLLWETCDCVVVLPGGTGTWDELMEVACHNSVGF-GKIPITVINVDGFYDGIIEQIARAASDKILYATPDDTMHVETTVKGALSW 177 +RV + SSSS TPE YLK AR LG +AK G+ C+NG G GCM A+N+GA G I VIH W+VD+ ++ + E+++A G +LQERKRLL E +VVLPGG GTWDEL E+AC +G +PI +NVD FY +E + RA D++L TPD+ +H T + A+ W Sbjct: 24 LRVTCYGSSSSKTPEKYLKEARNLGYILAKRGHTCVNGAGSFGCMAAMNDGAVEGNGHIVGVIHKMWLVDQGDWASTPTGKTLRDGGAHSVFDKASNKEGPIREMLIADGPDLQERKRLLVEGAHALVVLPGGPGTWDELWEMACARKLGLHNSLPIVCVNVDHFYQPFVEMMQRAYEDRLLEQTPDEVIHFVETAEEAVRW 225
BLAST of NO16G01900 vs. NCBI_GenBank
Match: XP_002177794.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC50608.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 159.8 bits (403), Expect = 1.100e-35 Identity = 79/180 (43.89%), Postives = 111/180 (61.67%), Query Frame = 0 Query: 2 RVCVFASSSSLTPEPYLKVARELGEEIAKAGYLCINGGGKNGCMGALNEGARASGGKIKTVIH---GKWIVDKMEFED--VDELVVAQGNNLQERKRLLWETCDCVVVLPGGTGTWDELMEVACHNSVGFGKIPITVINVDGFYDGIIEQIARAASDKILYATPDDTMHVETTVKGALSW 177 RVC + SSSSLTPE Y AR LG +A+ G+ C+NG G GCM A+NEGA G I VIH + ++ + D E++VA G++LQERK+LL + D +VVLPGG GTWDEL E+AC ++G +PI +NVDG+Y+ + RA D++ P + +H E + + A+ W Sbjct: 1 RVCCYGSSSSLTPERYRTEARSLGYILARRGHTCVNGAGSFGCMAAMNEGAAIGNGHIVGVIHEMVAHPVFERSDHRDGPTREMLVAGGDDLQERKKLLVQGADALVVLPGGPGTWDELWEMACGRNIGLHALPIVCVNVDGYYEPFQAMLQRAYDDQLTKLPPHEIVHFEDSAEAAVRW 180
BLAST of NO16G01900 vs. NCBI_GenBank
Match: GAX23748.1 (uncharacterized protein FisN_12Hh326 [Fistulifera solaris]) HSP 1 Score: 159.8 bits (403), Expect = 1.100e-35 Identity = 84/203 (41.38%), Postives = 113/203 (55.67%), Query Frame = 0 Query: 1 MRVCVFASSSSLTPEPYLKVARELGEEIAKAGYLCINGGGKNGCMGALNEGARASGGKIKTVIHGKWIVDKMEFED--------------------------VDELVVAQGNNLQERKRLLWETCDCVVVLPGGTGTWDELMEVACHNSVGF-GKIPITVINVDGFYDGIIEQIARAASDKILYATPDDTMHVETTVKGALSW 177 +RV + SSSS TPE YLK AR LG +AK G+ C+NG G GCM A+N+GA G I VIH W+VD+ ++ + E+++A G +LQERKRLL E +VVLPGG GTWDEL E+AC +G +PI +NVD FY +E + RA D++L PD+ +H T + A+ W Sbjct: 24 LRVTCYGSSSSKTPEKYLKEARNLGYILAKRGHTCVNGAGSFGCMAAMNDGAVEGNGHIVGVIHKMWLVDQGDWASTPTGKTLRDGGAHSVFEKSNNPSEGPIREMLIADGPDLQERKRLLVEGAHALVVLPGGPGTWDELWEMACARKLGLHNSLPIVCVNVDHFYQPFLEMMQRAYEDRLLEQKPDEVIHFVETAEEAVRW 226 The following BLAST results are available for this feature:
BLAST of NO16G01900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G01900 ID=NO16G01900|Name=NO16G01900|organism=Nannochloropsis oceanica|type=gene|length=1596bpback to top protein sequence of NO16G01900.2 >NO16G01900.2-protein ID=NO16G01900.2-protein|Name=NO16G01900.2|organism=Nannochloropsis oceanica|type=polypeptide|length=248bpback to top protein sequence of NO16G01900.1 >NO16G01900.1-protein ID=NO16G01900.1-protein|Name=NO16G01900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=248bpback to top Synonyms
Publications
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