NO16G01730, NO16G01730 (gene) Nannochloropsis oceanica

Overview
NameNO16G01730
Unique NameNO16G01730
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2894
Alignment locationchr16:516992..519885 -

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Properties
Property NameValue
DescriptionRECQ helicase L2
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:516992..519885 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR011545DEAD/DEAH_box_helicase_dom
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
Homology
BLAST of NO16G01730 vs. NCBI_GenBank
Match: KHG08244.1 (ATP-dependent DNA helicase Q1 [Gossypium arboreum])

HSP 1 Score: 426.8 bits (1096), Expect = 1.500e-115
Identity = 252/626 (40.26%), Postives = 363/626 (57.99%), Query Frame = 0
Query:   13 ADELRLVESKLSEVERQLRALKDERSTLLSRKVVLKETVEAQDVAADV----------DWSSDSFPWSGEAERIKKEVFGIAAPWRPDQKEIINATLSEMDTFVVMRTGGGKSLCFQLPALLPDKGLSLVISPLISLISDQXXXXXXXXXXXXVMLAGAMSREESNDVLRRMKDPRSPLRLVYVTPEKVLTSKLLMSTLEKLNEAQRLDRFVVDEAHCCSSMGNDFRPEYQKLSILRKLFPHVPILAVTATATPQVLRDVTDILQMSKVEFFKSPFNRPNLFYRVQPKPAGMDEAVAAVWSFLRAQHP-RQSGIVYCLSQKECETVAAKLALLGIATGVYHAGLDAELKDRVLRRWTADKLQVVVATIAFGMGINKPDVRFVIHFSIPKSIENYLQESGRAGRDGQISTCLLLYRASDVVRQASLVIHERVGLQKLRTVVEYAQLSGRVCRRIPISRALGEGGLVPQEACQGHCDVCSGEVRKKTANVTRATVGLIKLLRGLAAKEKRCTHRQLADLWLKEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVLQDKETVELLLNQLVVESILGEDYHATAYSINAYVVVGYRAAVVERGEIQVWMEVEISS 628
            A+EL+ +E ++ +VE Q+R L  ++  L  R+  L+  +E   +   V          DWS  SF W  +AE I+  VFGI++ +RP+Q+EIINA +S  D  V+M  GGGKSLC+QLPA+L  +G++LV+SPL+SLI DQ             ML    S+E+   + + ++     L+L+YVTPEKV  SK  MS LEK + A RL    +DEAHCCS  G+DFRP+Y+ L IL+  FP+VP++A+TATAT +V  D+ ++L + K   F S  NRPNLFY V+ K +     V  +  +++  +P ++SGIVYC S+KECE VA++L   GI+   YHA +D   +++V  RW+ +KLQ++V T+AFGMGINKPDVRFVIH S+ KS+E Y QESGRAGRDG  S CLL +R++D+ RQ+S+V HE  GLQ L  +V+Y Q S R CRR    R   E    P + C G CD C+     K  + +  +  LI L+R +  K++R T  QL D    + +                                               +E +E L+ QL+++ +L E++  TAY+ N+YV VG RA  V +G+  + M+V  +S
Sbjct:    7 AEELQNIEFEIHDVEEQIRELIKKQEKLYERRSELQVLLETCPIDVKVGSAPTNVQAEDWSR-SFDWDSQAEDIRFNVFGISS-YRPNQREIINAVMSGRDVLVIMAAGGGKSLCYQLPAIL-RQGIALVVSPLLSLIQDQVMGLVASGIPAH-MLTSTTSKEDEKFIYKALEKGEEDLKLLYVTPEKVSKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPNVPVVALTATATMKVQNDLIEMLHIPKCVKFVSTVNRPNLFYMVREKSSVGKIVVDEIAKYIKESYPNKESGIVYCFSRKECEQVASELCERGISADYYHADMDVNAREKVHMRWSKNKLQIIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLFFRSADMPRQSSMVFHENSGLQNLYDIVQYCQ-SKRQCRRSAFFRHFAE----PLQECNGMCDSCAFSSEIKEVDASGHSKLLISLVREMQEKDQRVTMLQLVDRVKNKQKQLDFEL----------------------------------------KREEMEQLVVQLILDRVLKEEFQHTAYATNSYVTVGPRANQVLQGKKIIKMDVTSTS 583          
BLAST of NO16G01730 vs. NCBI_GenBank
Match: XP_017623568.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 34 [Gossypium arboreum])

HSP 1 Score: 426.8 bits (1096), Expect = 1.500e-115
Identity = 252/626 (40.26%), Postives = 363/626 (57.99%), Query Frame = 0
Query:   13 ADELRLVESKLSEVERQLRALKDERSTLLSRKVVLKETVEAQDVAADV----------DWSSDSFPWSGEAERIKKEVFGIAAPWRPDQKEIINATLSEMDTFVVMRTGGGKSLCFQLPALLPDKGLSLVISPLISLISDQXXXXXXXXXXXXVMLAGAMSREESNDVLRRMKDPRSPLRLVYVTPEKVLTSKLLMSTLEKLNEAQRLDRFVVDEAHCCSSMGNDFRPEYQKLSILRKLFPHVPILAVTATATPQVLRDVTDILQMSKVEFFKSPFNRPNLFYRVQPKPAGMDEAVAAVWSFLRAQHP-RQSGIVYCLSQKECETVAAKLALLGIATGVYHAGLDAELKDRVLRRWTADKLQVVVATIAFGMGINKPDVRFVIHFSIPKSIENYLQESGRAGRDGQISTCLLLYRASDVVRQASLVIHERVGLQKLRTVVEYAQLSGRVCRRIPISRALGEGGLVPQEACQGHCDVCSGEVRKKTANVTRATVGLIKLLRGLAAKEKRCTHRQLADLWLKEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVLQDKETVELLLNQLVVESILGEDYHATAYSINAYVVVGYRAAVVERGEIQVWMEVEISS 628
            A+EL+ +E ++ +VE Q+R L  ++  L  R+  L+  +E   +   V          DWS  SF W  +AE I+  VFGI++ +RP+Q+EIINA +S  D  V+M  GGGKSLC+QLPA+L  +G++LV+SPL+SLI DQ             ML    S+E+   + + ++     L+L+YVTPEKV  SK  MS LEK + A RL    +DEAHCCS  G+DFRP+Y+ L IL+  FP+VP++A+TATAT +V  D+ ++L + K   F S  NRPNLFY V+ K +     V  +  +++  +P ++SGIVYC S+KECE VA++L   GI+   YHA +D   +++V  RW+ +KLQ++V T+AFGMGINKPDVRFVIH S+ KS+E Y QESGRAGRDG  S CLL +R++D+ RQ+S+V HE  GLQ L  +V+Y Q S R CRR    R   E    P + C G CD C+     K  + +  +  LI L+R +  K++R T  QL D    + +                                               +E +E L+ QL+++ +L E++  TAY+ N+YV VG RA  V +G+  + M+V  +S
Sbjct:    7 AEELQNIEFEIHDVEEQIRELIKKQEKLYERRSELQVLLETCPIDVKVGSAPTNVQAEDWSR-SFDWDSQAEDIRFNVFGISS-YRPNQREIINAVMSGRDVLVIMAAGGGKSLCYQLPAIL-RQGIALVVSPLLSLIQDQVMGLVASGIPAH-MLTSTTSKEDEKFIYKALEKGEEDLKLLYVTPEKVSKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPNVPVVALTATATMKVQNDLIEMLHIPKCVKFVSTVNRPNLFYMVREKSSVGKIVVDEIAKYIKESYPNKESGIVYCFSRKECEQVASELCERGISADYYHADMDVNAREKVHMRWSKNKLQIIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLFFRSADMPRQSSMVFHENSGLQNLYDIVQYCQ-SKRQCRRSAFFRHFAE----PLQECNGMCDSCAFSSEIKEVDASGHSKLLISLVREMQEKDQRVTMLQLVDRVKNKQKQLDFEL----------------------------------------KREEMEQLVVQLILDRVLKEEFQHTAYATNSYVTVGPRANQVLQGKKIIKMDVTSTS 583          
BLAST of NO16G01730 vs. NCBI_GenBank
Match: GAQ81432.1 (Helicase conserved C-terminal domain containing protein [Klebsormidium nitens])

HSP 1 Score: 421.4 bits (1082), Expect = 6.400e-114
Identity = 252/622 (40.51%), Postives = 356/622 (57.23%), Query Frame = 0
Query:   19 VESKLSEVERQLRALKDERSTLLSRKVVL---KETVEAQDVAAD------VDWSSDSFPWSGEAERIKKEVFGIAAPWRPDQKEIINATLSEMDTFVVMRTGGGKSLCFQLPALLPDKGLSLVISPLISLISDQXXXXXXXXXXXXVMLAGAMSREESNDVLRRMKDPRSPLRLVYVTPEKVLTSKLLMSTLEKLNEAQRLDRFVVDEAHCCSSMGNDFRPEYQKLSILRKLFPHVPILAVTATATPQVLRDVTDILQMSKVEFFKSPFNRPNLFYRVQPKPAGMDEAVAAVWSFLRAQHPRQ--SGIVYCLSQKECETVAAKLALLGIATGVYHAGLDAELKDRVLRRWTADKLQVVVATIAFGMGINKPDVRFVIHFSIPKSIENYLQESGRAGRDGQISTCLLLYRASDVVRQASLVIHERVGLQKLRTVVEYAQLSGRVCRRIPISRALGEGGLVPQEACQGHCDVC--SGEVRKKTANVTRATVGLIKLLRGLAAKEKRCTHRQLADLWLKEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVLQDKETVELLLNQLVVESILGEDYHATAYSINAYVVVGYRAAVVERGEIQVWMEVEISS 628
            +E++++ + R+L+ ++D    +L R+  L   KE +E + +AA       V   +  + W  +   ++K +FG+AA +R  Q+E IN  LS  D FV+M +GGGKSLC+QLP ++   G++LV+SPL+SLI DQ             ML   + +EE   V + ++     LR VYVTPEKV  SK  MS LEK ++A RL    +DEAHCCS  G+DFRP+Y  L IL+K FP VP++A+TATAT +V  DV ++L +     F S  NRPNL+Y V+ K AG    V  + +F++  +P Q  SGIVYC S+KECE VA++L+  GI+ G YHA ++   +  V + W+ + LQVVVAT+AFGMGINKPDVRFV+H S+ KS+E Y QESGRAGRDG  S C+L YR +DV RQ+ +V  E  GL+ L  +V Y Q S + CRR  I R  GE    P + C G CD C  +G VRK   ++T     L+ LLR LA KEKR T  QL + W  +A                                                KE  E  + QL+++ +L E++  TA++ N+Y+  G    ++E G ++V++EV  SS
Sbjct:   24 LEAEIAGINRELKTIEDSVGRMLERQAHLAKQKEKLEVKVLAAQKVLSYPVQGWAGKYSWDDDIADLRKNLFGLAA-FRKHQRETINCVLSGSDCFVIMPSGGGKSLCYQLPTMVLQAGVTLVVSPLLSLIQDQ-VMGLSVMGIEAAMLTSQIDKEEETRVYKALEHGGQDLRFVYVTPEKVAKSKRFMSKLEKCDKAGRLALIAIDEAHCCSQWGHDFRPDYHHLGILKKQFPKVPMMALTATATQRVQDDVQEMLGIQGCPKFVSSVNRPNLYYEVREKLAGATAVVDDMVAFIQEHYPSQQDSGIVYCFSRKECEQVASELSQRGISAGYYHADMNPRQRHEVHQNWSCNYLQVVVATVAFGMGINKPDVRFVLHHSLSKSVETYYQESGRAGRDGLPSRCVLYYRPTDVTRQSCMVFAEASGLENLYAMVAYCQ-SRQKCRREAIFRHFGE----PLQPCNGMCDNCGDAGTVRK--LDITDKAEALVALLRALAGKEKRATLLQLCEQWKDKA----------------------------------------------VGKEDKERAVVQLLLDGVLAEEFGHTAFATNSYITRGPSLPLLEHGHLKVFLEVSDSS 590          
BLAST of NO16G01730 vs. NCBI_GenBank
Match: PPR85652.1 (hypothetical protein GOBAR_AA35046 [Gossypium barbadense])

HSP 1 Score: 418.7 bits (1075), Expect = 4.200e-113
Identity = 239/568 (42.08%), Postives = 336/568 (59.15%), Query Frame = 0
Query:   61 DWSSDSFPWSGEAERIKKEVFGIAAPWRPDQKEIINATLSEMDTFVVMRTGGGKSLCFQLPALLPDKGLSLVISPLISLISDQXXXXXXXXXXXXVMLAGAMSREESNDVLRRMKDPRSPLRLVYVTPEKVLTSKLLMSTLEKLNEAQRLDRFVVDEAHCCSSMGNDFRPEYQKLSILRKLFPHVPILAVTATATPQVLRDVTDILQMSKVEFFKSPFNRPNLFYRVQPKPAGMDEAVAAVWSFLRAQHP-RQSGIVYCLSQKECETVAAKLALLGIATGVYHAGLDAELKDRVLRRWTADKLQVVVATIAFGMGINKPDVRFVIHFSIPKSIENYLQESGRAGRDGQISTCLLLYRASDVVRQASLVIHERVGLQKLRTVVEYAQLSGRVCRRIPISRALGEGGLVPQEACQGHCDVCSGEVRKKTANVTRATVGLIKLLRGLAAKEKRCTHRQLADLWLKEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVLQDKETVELLLNQLVVESILGEDYHATAYSINAYVVVGYRAAVVERGEIQVWMEVEISS 628
            DWS  SF W  +AE I+  VFGI++ +RP+Q+EIINA +S  D  V+M  GGGKSLC+QLPA+L  +G++LV+SPL+SLI DQ             ML    S+E+   + + ++     L+L+YVTPEKV  SK  MS LEK + A RL    +DEAHCCS  G+DFRP+Y+ L IL+  FP+VP++A+TATAT +V  D+ ++L + K   F S  NRPNLFY VQ K +     V  +  +++  +P ++SGIVYC S+KECE VA++L   GI+   YHA +D   +++V  RW+ +KLQ++V T+AFGMGINKPDVRFVIH S+ KS+E Y QESGRAGRDG  S CLL +R++D+ RQ+S+V HE  GLQ L  +V+Y Q S R CRR    R   E    P + C G CD C+     K  + +  +  LI L+R +  K++R T  QL D    + +                                               +E +E L+ QL+++ +L E++  TAY+ N+YV VG RA  V +G+  + M+V  +S
Sbjct:   65 DWSR-SFDWDSQAEDIRFNVFGISS-YRPNQREIINAVMSGRDVLVIMAAGGGKSLCYQLPAIL-RQGIALVVSPLLSLIQDQVMGLVASGIPAH-MLTSTTSKEDEKFIYKALEKGEEDLKLLYVTPEKVSKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPNVPVVALTATATMKVQNDLIEMLHIPKCVKFVSTVNRPNLFYMVQEKSSVGKIVVDEIAKYIKESYPNKESGIVYCFSRKECEQVASELCERGISADYYHADMDVNAREKVHMRWSKNKLQIIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLFFRSADMPRQSSMVFHENSGLQNLYDIVQYCQ-SKRQCRRSAFFRHFAE----PLQECNGMCDSCAFSSEIKEVDASGHSKLLISLVREMQEKDQRVTMLQLVDRVKNKQKQLGSSISSYTTSNKYDFEL---------------------------KREEMEQLVVQLILDRVLKEEFQHTAYATNSYVTVGPRANQVLQGKKIIKMDVSSTS 596          
BLAST of NO16G01730 vs. NCBI_GenBank
Match: XP_013088760.1 (PREDICTED: ATP-dependent DNA helicase Q1-like, partial [Biomphalaria glabrata])

HSP 1 Score: 417.9 bits (1073), Expect = 7.100e-113
Identity = 247/611 (40.43%), Postives = 345/611 (56.46%), Query Frame = 0
Query:   14 DELRLVESKLSEVERQLRALKDERSTLLSRKVVLKETVEAQDV----AADVDWSSDSFPWSGEAERIKKEVFGIAAPWRPDQKEIINATLSEMDTFVVMRTGGGKSLCFQLPALLPDKGLSLVISPLISLISDQXXXXXXXXXXXXVMLAGAMSREESNDVLRRMKDPRSPLRLVYVTPEKVLTSKLLMSTLEKLNEAQRLDRFVVDEAHCCSSMGNDFRPEYQKLSILRKLFPHVPILAVTATATPQVLRDVTDILQMSKVEFFKSPFNRPNLFYRVQPKPAGMDEAVAAVWSFLRAQHPRQSGIVYCLSQKECETVAAKLALLGIATGVYHAGLDAELKDRVLRRWTADKLQVVVATIAFGMGINKPDVRFVIHFSIPKSIENYLQESGRAGRDGQISTCLLLYRASDVVRQASLVIHERVGLQKLRTVVEYAQLSGRVCRRIPISRALGEGGLVPQEACQGHCDVCS-GEVRKKTANVTRATVGLIKLLRGLAAKEKRCTHRQLADLWLKEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVLQDKETVELLLNQLVVESILGEDYHATAYSINAYVVVGYRAAVVERGEIQV 620
            +EL  VES+LS +E +L+ L + +S+L++R+  LK  +E  ++       + W    FPW+ E +   K VF +    R  Q++ +NATL++ D  ++M TGGGKSLCFQLPA++  KGL+LVISPL+SL+ DQ            +    A S+EE+  +   M + +  L+L+YVTPEK+  SK  M+ LEK      L R V+DE HCCS  G+DFRP+Y+ L IL++ FP+ PIL +TATAT  VL DV  IL + +   F++ FNRPNLFY VQ KPA   + +  ++  +  +   QSGI+YC S+K+ E VA  L   GI  G YHA + A+ +  V R+W +  +QVVVAT+AFGMGI+KPDVRFVIH SI KSIEN  QESGRAGRDGQ S C++LYR +DV RQ+S+V  E+ GL  L  +V+Y  +    CRR  I+R  GE  +     C   CD C   + + K  +VT     LI +L   AA ++R T  +L D W                                                    K+  E ++ QLVVE  L ED+H TAYS   Y++ G +A ++  G ++V
Sbjct:    3 NELCKVESELSLLEVELQELLERQSSLVNRRAELKLILEQSELDNQQNKHIKWEGTDFPWTAELDNKLKSVFKL-NELRSMQRQTMNATLAKEDCLLIMPTGGGKSLCFQLPAVI-SKGLTLVISPLVSLMEDQQMALELLKIPSAI-FTSATSKEEAKHIQEDMVNTKGHLKLLYVTPEKLAKSKRFMNRLEKSYAINHLTRIVIDEVHCCSQWGHDFRPDYKFLGILKRQFPNAPILGLTATATINVLEDVKKILNIPRALLFRASFNRPNLFYEVQEKPATQKDTMDKIFHLINKRFRGQSGIIYCFSRKDSEEVATDLKSRGIKAGCYHADMTAQSRSAVHRKWLSGDVQVVVATVAFGMGIDKPDVRFVIHHSISKSIENLYQESGRAGRDGQRSDCIVLYRLADVTRQSSMVFTEQTGLPNLYGIVQYC-IDVAKCRRSLIARHFGE--VWESAQCDKMCDHCDRAQCQVKVKDVTHYCKDLISILDAAAATQQRVTSAKLLDAWYGRGPAGVKVKSIAAPSLA---------------------------------KDQAERIVAQLVVEGYLREDFHFTAYSTICYIIPGPKAKLLRNGGVKV 574          
BLAST of NO16G01730 vs. NCBI_GenBank
Match: XP_024537020.1 (mediator of RNA polymerase II transcription subunit 34 isoform X4 [Selaginella moellendorffii])

HSP 1 Score: 416.8 bits (1070), Expect = 1.600e-112
Identity = 247/623 (39.65%), Postives = 350/623 (56.18%), Query Frame = 0
Query:    8 SKRAAADELRLVESKLSEVERQLRALKDERSTLLSRKVVLKETV------EAQDV-AADVDWSSDSFPWSGEAERIKKEVFGIAAPWRPDQKEIINATLSEMDTFVVMRTGGGKSLCFQLPALLPDKGLSLVISPLISLISDQXXXXXXXXXXXXVMLAGAMSREESNDVLRRMKDPRSPLRLVYVTPEKVLTSKLLMSTLEKLNEAQRLDRFVVDEAHCCSSMGNDFRPEYQKLSILRKLFPHVPILAVTATATPQVLRDVTDILQMSKVEFFKSPFNRPNLFYRVQPKPAGMDEAVAAVWSFLRAQHP-RQSGIVYCLSQKECETVAAKLALLGIATGVYHAGLDAELKDRVLRRWTADKLQVVVATIAFGMGINKPDVRFVIHFSIPKSIENYLQESGRAGRDGQISTCLLLYRASDVVRQASLVIHERVGLQKLRTVVEYAQLSGRVCRRIPISRALGEGGLVPQEACQGHCDVCSGEVRKKTANVTRATVGLIKLLRGLAAKEKRCTHRQLADLWLKEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVLQDKETVELLLNQLVVESILGEDYHATAYSINAYVVVGYRAAVVERGEIQVWME 623
            ++   A  L  V+++L EV+ Q+  L D ++ LL  +  L++ +      E  D+   + DWS  +F W  EA  +   VFGI+  +R +Q+EI+NA +S  +  VVM  GGGKSLC+QLPALL   G++LV+SPL+SLI DQ             ML    S+EE  ++ R ++     LR++YVTPEK+  SK  MS LEK N A RL    +DEAHCCS  G+DFRP+Y+ L IL+K FP VP++A+TATAT +V RD+ ++LQ+   E F S  NRPNLFY V+ K     + +  +  F++  +P  +SGIVYC S+KECE VA  L    I+   YHA +D+ L+  V RRW++++LQV+V T+AFGMGINKPDVRFVIH ++ KS+E Y QESGRAGRDG  S C+L +R +DV RQ+ +V  E  GLQ L  +  Y Q   R CRR    +   E      + C G CD C+ E      +VT     L++ +  +A  +K+ T  QL DLW  + R                                               K+  E ++ QL+++  L ED+  TAY+ NAYV  G  A ++ +G+ +V +E
Sbjct:    2 AEEEVALRLEAVDAELQEVQAQIAVLCDRQARLLEEQAELRQLIDCCRASEEDDIQIIEQDWSG-NFEWDNEASNLLLNVFGIST-YRRNQREIVNALMSNKNVVVVMAAGGGKSLCYQLPALL-RPGIALVVSPLLSLIQDQ-VMGLAALGVSAAMLTSTTSKEEEKEIYRVLEKGDGNLRILYVTPEKIAKSKRFMSKLEKCNRAGRLSLVAIDEAHCCSQWGHDFRPDYKNLGILKKQFPKVPMIALTATATGRVQRDLQEMLQILPCERFTSSVNRPNLFYEVRDKKQVAADVIEDIALFIKETYPSNESGIVYCFSRKECEQVADALRKRQISAAHYHADMDSGLRTNVHRRWSSNQLQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPSRCVLFFRPADVPRQSCMVFSENTGLQNLYAMARYCQSKQR-CRRAAFFQYFAE----QVQECNGMCDTCAFENDVVEKDVTEYGKSLVQSVMDVAESDKKTTLLQLVDLWRSQLRQAGDKE---------------------------------------MSKDDAEQIILQLILDGTLREDFQHTAYATNAYVKAGSAARLILQGKRKVILE 576          
BLAST of NO16G01730 vs. NCBI_GenBank
Match: XP_024537018.1 (mediator of RNA polymerase II transcription subunit 34 isoform X2 [Selaginella moellendorffii])

HSP 1 Score: 416.8 bits (1070), Expect = 1.600e-112
Identity = 247/623 (39.65%), Postives = 350/623 (56.18%), Query Frame = 0
Query:    8 SKRAAADELRLVESKLSEVERQLRALKDERSTLLSRKVVLKETV------EAQDV-AADVDWSSDSFPWSGEAERIKKEVFGIAAPWRPDQKEIINATLSEMDTFVVMRTGGGKSLCFQLPALLPDKGLSLVISPLISLISDQXXXXXXXXXXXXVMLAGAMSREESNDVLRRMKDPRSPLRLVYVTPEKVLTSKLLMSTLEKLNEAQRLDRFVVDEAHCCSSMGNDFRPEYQKLSILRKLFPHVPILAVTATATPQVLRDVTDILQMSKVEFFKSPFNRPNLFYRVQPKPAGMDEAVAAVWSFLRAQHP-RQSGIVYCLSQKECETVAAKLALLGIATGVYHAGLDAELKDRVLRRWTADKLQVVVATIAFGMGINKPDVRFVIHFSIPKSIENYLQESGRAGRDGQISTCLLLYRASDVVRQASLVIHERVGLQKLRTVVEYAQLSGRVCRRIPISRALGEGGLVPQEACQGHCDVCSGEVRKKTANVTRATVGLIKLLRGLAAKEKRCTHRQLADLWLKEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVLQDKETVELLLNQLVVESILGEDYHATAYSINAYVVVGYRAAVVERGEIQVWME 623
            ++   A  L  V+++L EV+ Q+  L D ++ LL  +  L++ +      E  D+   + DWS  +F W  EA  +   VFGI+  +R +Q+EI+NA +S  +  VVM  GGGKSLC+QLPALL   G++LV+SPL+SLI DQ             ML    S+EE  ++ R ++     LR++YVTPEK+  SK  MS LEK N A RL    +DEAHCCS  G+DFRP+Y+ L IL+K FP VP++A+TATAT +V RD+ ++LQ+   E F S  NRPNLFY V+ K     + +  +  F++  +P  +SGIVYC S+KECE VA  L    I+   YHA +D+ L+  V RRW++++LQV+V T+AFGMGINKPDVRFVIH ++ KS+E Y QESGRAGRDG  S C+L +R +DV RQ+ +V  E  GLQ L  +  Y Q   R CRR    +   E      + C G CD C+ E      +VT     L++ +  +A  +K+ T  QL DLW  + R                                               K+  E ++ QL+++  L ED+  TAY+ NAYV  G  A ++ +G+ +V +E
Sbjct:    2 AEEEVALRLEAVDAELQEVQAQIAVLCDRQARLLEEQAELRQLIDCCRASEEDDIQIIEQDWSG-NFEWDNEASNLLLNVFGIST-YRRNQREIVNALMSNKNVVVVMAAGGGKSLCYQLPALL-RPGIALVVSPLLSLIQDQ-VMGLAALGVSAAMLTSTTSKEEEKEIYRVLEKGDGNLRILYVTPEKIAKSKRFMSKLEKCNRAGRLSLVAIDEAHCCSQWGHDFRPDYKNLGILKKQFPKVPMIALTATATGRVQRDLQEMLQILPCERFTSSVNRPNLFYEVRDKKQVAADVIEDIALFIKETYPSNESGIVYCFSRKECEQVADALRKRQISAAHYHADMDSGLRTNVHRRWSSNQLQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPSRCVLFFRPADVPRQSCMVFSENTGLQNLYAMARYCQSKQR-CRRAAFFQYFAE----QVQECNGMCDTCAFENDVVEKDVTEYGKSLVQSVMDVAESDKKTTLLQLVDLWRSQLRQAGNHISGVYGHILQSQTGDKE-----------------------MSKDDAEQIILQLILDGTLREDFQHTAYATNAYVKAGSAARLILQGKRKVILE 592          
BLAST of NO16G01730 vs. NCBI_GenBank
Match: XP_012476949.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 34 [Gossypium raimondii] >KJB26895.1 hypothetical protein B456_004G265100 [Gossypium raimondii])

HSP 1 Score: 413.7 bits (1062), Expect = 1.300e-111
Identity = 238/568 (41.90%), Postives = 335/568 (58.98%), Query Frame = 0
Query:   61 DWSSDSFPWSGEAERIKKEVFGIAAPWRPDQKEIINATLSEMDTFVVMRTGGGKSLCFQLPALLPDKGLSLVISPLISLISDQXXXXXXXXXXXXVMLAGAMSREESNDVLRRMKDPRSPLRLVYVTPEKVLTSKLLMSTLEKLNEAQRLDRFVVDEAHCCSSMGNDFRPEYQKLSILRKLFPHVPILAVTATATPQVLRDVTDILQMSKVEFFKSPFNRPNLFYRVQPKPAGMDEAVAAVWSFLRAQHP-RQSGIVYCLSQKECETVAAKLALLGIATGVYHAGLDAELKDRVLRRWTADKLQVVVATIAFGMGINKPDVRFVIHFSIPKSIENYLQESGRAGRDGQISTCLLLYRASDVVRQASLVIHERVGLQKLRTVVEYAQLSGRVCRRIPISRALGEGGLVPQEACQGHCDVCSGEVRKKTANVTRATVGLIKLLRGLAAKEKRCTHRQLADLWLKEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVLQDKETVELLLNQLVVESILGEDYHATAYSINAYVVVGYRAAVVERGEIQVWMEVEISS 628
            DWS  SF W  +AE I+  VFGI++ +RP+Q+EIINA +S  D  V+M  GGGKSLC+QLPA+L  +G++LV+SPL+SLI DQ             ML    S+E+   + + ++     L+L+YVTPEKV  SK  MS LEK + A RL    +DEAHCCS  G+DFRP+Y+ L IL+  FP+VP++A+TATAT +V  D+ ++L + K   F S  NRPNLFY V+ K +     V  +  +++  +P ++SGIVYC S+KECE VA++L   GI+   YHA +D   +++V  RW+ +KLQV+V T+AFGMGINKPDVRFVIH S+ KS+E Y QESGRAGRDG  S CLL +R++D+ RQ+++V HE  GLQ L  +V+Y Q S R CRR    R   E    P + C G CD C+     K  + +  +  LI L+R +  K++R T  QL D    + +                                               +E +E L+ QL+++ +L E++  TAY+ N+YV VG RA  V  G+  + M+V  +S
Sbjct:   65 DWSR-SFDWDSQAEDIRFNVFGISS-YRPNQREIINAVMSGRDVLVIMAAGGGKSLCYQLPAIL-RQGIALVVSPLLSLIQDQVMGLVASGIPAR-MLTSTTSKEDEKFIYKALEKGEEGLKLLYVTPEKVSKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGILKTQFPNVPVVALTATATMKVQNDLIEMLHIPKCVKFVSTVNRPNLFYMVREKSSVGKIVVDEIAKYIKESYPNKESGIVYCFSRKECEQVASELCERGISADYYHADMDVNAREKVHMRWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLFFRSADMPRQSTMVFHENSGLQNLYDMVQYCQ-SKRQCRRSAFFRHFAE----PLQECNGMCDNCAFSSEIKEVDASGHSKLLISLVREMQEKDQRVTMLQLVDRVKNKQKQLDFEL----------------------------------------KREEMEQLVVQLILDRVLKEEFQHTAYATNSYVTVGPRANQVMLGKKIIKMDVTSTS 583          
BLAST of NO16G01730 vs. NCBI_GenBank
Match: XP_024516913.1 (mediator of RNA polymerase II transcription subunit 34 isoform X2 [Selaginella moellendorffii])

HSP 1 Score: 413.3 bits (1061), Expect = 1.800e-111
Identity = 246/623 (39.49%), Postives = 349/623 (56.02%), Query Frame = 0
Query:    8 SKRAAADELRLVESKLSEVERQLRALKDERSTLLSRKVVLKETV------EAQDV-AADVDWSSDSFPWSGEAERIKKEVFGIAAPWRPDQKEIINATLSEMDTFVVMRTGGGKSLCFQLPALLPDKGLSLVISPLISLISDQXXXXXXXXXXXXVMLAGAMSREESNDVLRRMKDPRSPLRLVYVTPEKVLTSKLLMSTLEKLNEAQRLDRFVVDEAHCCSSMGNDFRPEYQKLSILRKLFPHVPILAVTATATPQVLRDVTDILQMSKVEFFKSPFNRPNLFYRVQPKPAGMDEAVAAVWSFLRAQHP-RQSGIVYCLSQKECETVAAKLALLGIATGVYHAGLDAELKDRVLRRWTADKLQVVVATIAFGMGINKPDVRFVIHFSIPKSIENYLQESGRAGRDGQISTCLLLYRASDVVRQASLVIHERVGLQKLRTVVEYAQLSGRVCRRIPISRALGEGGLVPQEACQGHCDVCSGEVRKKTANVTRATVGLIKLLRGLAAKEKRCTHRQLADLWLKEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVLQDKETVELLLNQLVVESILGEDYHATAYSINAYVVVGYRAAVVERGEIQVWME 623
            ++   A  L  V+++L  V+ Q+  L D ++ LL  +  L++ +      E  D+   + DWS  +F W  EA  +   VFGI+  +R +Q+EI+NA +S  +  VVM  GGGKSLC+QLPALL   G++LV+SPL+SLI DQ             ML    S+EE  ++ R ++     LR++YVTPEK+  SK  MS LEK N A RL    +DEAHCCS  G+DFRP+Y+ L IL+K FP VP++A+TATAT +V RD+ ++LQ+   E F S  NRPNLFY V+ K     + +  +  F++  +P  +SGIVYC S+KECE VA  L    I+   YHA +D+ L+  V RRW++++LQV+V T+AFGMGINKPDVRFVIH ++ KS+E Y QESGRAGRDG  S C+L +R +DV RQ+ +V  E  GLQ L  +  Y Q   R CRR    +   E      + C G CD C+ E      +VT     L++ +  +A  +K+ T  QL DLW  + R                                               K+  E ++ QL+++  L ED+  TAY+ NAYV  G  A ++ +G+ +V +E
Sbjct:    2 AEEEVALRLEAVDAELQGVQAQIAVLCDRQARLLEEQAELRQLIDCCRASEEDDIQIIEQDWSG-NFEWDNEASNLLLNVFGIST-FRRNQREIVNALMSNKNVVVVMAAGGGKSLCYQLPALL-RPGIALVVSPLLSLIQDQ-VMGLAALGVSAAMLTSTTSKEEEKEIYRVLEKGDGNLRILYVTPEKIAKSKRFMSKLEKCNRAGRLSLVAIDEAHCCSQWGHDFRPDYKNLGILKKQFPKVPMIALTATATGRVQRDLQEMLQILPCERFTSSVNRPNLFYEVRDKKQVAADVIEDIALFIKETYPSNESGIVYCFSRKECEQVADALRKRQISAAHYHADMDSGLRTNVHRRWSSNQLQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPSRCVLYFRPADVPRQSCMVFSENTGLQNLYAMARYCQSKQR-CRRAAFFQYFAE----QVQECNGMCDTCAFENDVVEKDVTEYGKSLVQSVMDVAESDKKTTLLQLVDLWRSQLRQAGNHMSGVYGHILQSQTGDKE-----------------------MSKDDAEQIILQLILDGTLREDFQHTAYATNAYVKAGSAARLILQGKRKVILE 592          
BLAST of NO16G01730 vs. NCBI_GenBank
Match: XP_024516916.1 (mediator of RNA polymerase II transcription subunit 34 isoform X4 [Selaginella moellendorffii])

HSP 1 Score: 413.3 bits (1061), Expect = 1.800e-111
Identity = 246/623 (39.49%), Postives = 349/623 (56.02%), Query Frame = 0
Query:    8 SKRAAADELRLVESKLSEVERQLRALKDERSTLLSRKVVLKETV------EAQDV-AADVDWSSDSFPWSGEAERIKKEVFGIAAPWRPDQKEIINATLSEMDTFVVMRTGGGKSLCFQLPALLPDKGLSLVISPLISLISDQXXXXXXXXXXXXVMLAGAMSREESNDVLRRMKDPRSPLRLVYVTPEKVLTSKLLMSTLEKLNEAQRLDRFVVDEAHCCSSMGNDFRPEYQKLSILRKLFPHVPILAVTATATPQVLRDVTDILQMSKVEFFKSPFNRPNLFYRVQPKPAGMDEAVAAVWSFLRAQHP-RQSGIVYCLSQKECETVAAKLALLGIATGVYHAGLDAELKDRVLRRWTADKLQVVVATIAFGMGINKPDVRFVIHFSIPKSIENYLQESGRAGRDGQISTCLLLYRASDVVRQASLVIHERVGLQKLRTVVEYAQLSGRVCRRIPISRALGEGGLVPQEACQGHCDVCSGEVRKKTANVTRATVGLIKLLRGLAAKEKRCTHRQLADLWLKEARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMVLQDKETVELLLNQLVVESILGEDYHATAYSINAYVVVGYRAAVVERGEIQVWME 623
            ++   A  L  V+++L  V+ Q+  L D ++ LL  +  L++ +      E  D+   + DWS  +F W  EA  +   VFGI+  +R +Q+EI+NA +S  +  VVM  GGGKSLC+QLPALL   G++LV+SPL+SLI DQ             ML    S+EE  ++ R ++     LR++YVTPEK+  SK  MS LEK N A RL    +DEAHCCS  G+DFRP+Y+ L IL+K FP VP++A+TATAT +V RD+ ++LQ+   E F S  NRPNLFY V+ K     + +  +  F++  +P  +SGIVYC S+KECE VA  L    I+   YHA +D+ L+  V RRW++++LQV+V T+AFGMGINKPDVRFVIH ++ KS+E Y QESGRAGRDG  S C+L +R +DV RQ+ +V  E  GLQ L  +  Y Q   R CRR    +   E      + C G CD C+ E      +VT     L++ +  +A  +K+ T  QL DLW  + R                                               K+  E ++ QL+++  L ED+  TAY+ NAYV  G  A ++ +G+ +V +E
Sbjct:    2 AEEEVALRLEAVDAELQGVQAQIAVLCDRQARLLEEQAELRQLIDCCRASEEDDIQIIEQDWSG-NFEWDNEASNLLLNVFGIST-FRRNQREIVNALMSNKNVVVVMAAGGGKSLCYQLPALL-RPGIALVVSPLLSLIQDQ-VMGLAALGVSAAMLTSTTSKEEEKEIYRVLEKGDGNLRILYVTPEKIAKSKRFMSKLEKCNRAGRLSLVAIDEAHCCSQWGHDFRPDYKNLGILKKQFPKVPMIALTATATGRVQRDLQEMLQILPCERFTSSVNRPNLFYEVRDKKQVAADVIEDIALFIKETYPSNESGIVYCFSRKECEQVADALRKRQISAAHYHADMDSGLRTNVHRRWSSNQLQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRAGRDGLPSRCVLYFRPADVPRQSCMVFSENTGLQNLYAMARYCQSKQR-CRRAAFFQYFAE----QVQECNGMCDTCAFENDVVEKDVTEYGKSLVQSVMDVAESDKKTTLLQLVDLWRSQLRQAGDKE---------------------------------------MSKDDAEQIILQLILDGTLREDFQHTAYATNAYVKAGSAARLILQGKRKVILE 576          
The following BLAST results are available for this feature:
BLAST of NO16G01730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
KHG08244.11.500e-11540.26ATP-dependent DNA helicase Q1 [Gossypium arboreum][more]
XP_017623568.11.500e-11540.26PREDICTED: mediator of RNA polymerase II transcrip... [more]
GAQ81432.16.400e-11440.51Helicase conserved C-terminal domain containing pr... [more]
PPR85652.14.200e-11342.08hypothetical protein GOBAR_AA35046 [Gossypium barb... [more]
XP_013088760.17.100e-11340.43PREDICTED: ATP-dependent DNA helicase Q1-like, par... [more]
XP_024537020.11.600e-11239.65mediator of RNA polymerase II transcription subuni... [more]
XP_024537018.11.600e-11239.65mediator of RNA polymerase II transcription subuni... [more]
XP_012476949.11.300e-11141.90PREDICTED: mediator of RNA polymerase II transcrip... [more]
XP_024516913.11.800e-11139.49mediator of RNA polymerase II transcription subuni... [more]
XP_024516916.11.800e-11139.49mediator of RNA polymerase II transcription subuni... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL150nonsL150Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G01730.1NO16G01730.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100027g46gene6514Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G01730.1NO16G01730.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G01730 ID=NO16G01730|Name=NO16G01730|organism=Nannochloropsis oceanica|type=gene|length=2894bp
CAGGAAAAACCAATGACGATAAGGATGAGGCTCTATACCGTCACATCGGG
TTGATTTGGGCCTACAAACGAGCCGAGCAGTTTCCCATTTCCTTCTACAC
CGTTTTCATGGTTTCCACGAACGCCGCCTCCAAGCGCGCGGCCGCCGACG
AGTTGCGTTTGGTGGAAAGCAAGCTGAGCGAGGTGGAGCGGCAACTTCGT
GCGTTGAAGGACGAGCGATCCACGCTGCTTTCGCGGAAGGTAGTATTGAA
AGAGACTGTGGAAGCACAGGACGTGGCGGCGGACGTGGACTGGTCCAGCG
ACTCCTTTCCCTGGTCGGGCGAAGCCGAGCGGATCAAGAAGGAAGTGTTT
GGGATAGCTGCCCCATGGCGACCGGATCAGAAGGAGATTATCAATGCGAC
TCTATCGGAGATGGACACCTTTGTCGTGATGCGGACAGGAGGAGGGAAGA
GCCTTTGCTTTCAGTTGCCTGCTCTATTGCCAGACAAAGGCCTGAGCCTC
GTCATATCTCCTCTGATCTCCCTCATTTCCGACCAATGCTACCAATTGGA
ATCCATCGCTCCTGGCAAAGGTGTGATGCTGGCAGGTGCCATGTCACGGG
AGGAATCAAATGACGTGTTGCGCCGGATGAAGGACCCTCGAAGCCCGCTG
CGGCTCGTCTACGTGACGCCTGAAAAAGTGTTGACCAGCAAGCTCCTCAT
GTCCACTTTGGAGAAATTGAATGAAGCGCAGCGCCTTGACCGTTTCGTAG
TCGATGAAGCCCATTGCTGCTCTTCCATGGGCAATGACTTCCGCCCCGAA
TACCAAAAACTTTCCATCCTACGCAAGCTTTTCCCCCACGTCCCCATTCT
TGCCGTTACGGCCACCGCCACTCCTCAAGTCCTCCGAGACGTTACCGATA
TCCTTCAAATGTCCAAGGTGGAATTTTTTAAATCCCCATTTAACCGCCCC
AACCTCTTCTATCGGGTGCAACCCAAACCTGCCGGCATGGACGAGGCTGT
TGCCGCCGTGTGGTCTTTCCTGCGGGCGCAACACCCCCGGCAGAGTGGAA
TCGTTTACTGCTTGTCCCAGAAGGAGTGTGAGACAGTGGCAGCCAAACTC
GCCTTGCTGGGAATCGCCACAGGCGTCTACCATGCCGGGTTGGACGCTGA
GTTAAAGGATCGGGTGCTAAGAAGATGGACTGCGGATAAGCTGCAGGTGG
TGGTGGCTACGATTGCGTTTGGCATGGGgtgagtgctgggaaggaggaga
gtgagggaggaagggtgggaggaagtgagagagggccgggtgaggacagt
cgtcgcatgggtatgtgttgatgaggctcctactcactcacctttccccc
cccattccttcctccttcccctcctcaccctcgcccagCATCAACAAACC
CGATGTCCGCTTCGTCATCCACTTCTCCATCCCCAAATCCATTGAGAACT
ACCTCCAAGAATCAGGCCGAGCAGGCCGTGACGGTCAGATCAGTACTTGC
CTCCTCCTCTATCGTGCTTCGGATGTAGTCCGTCAAGCGTCGCTGGTGAT
CCACGAGAGGGTGGGCCTGCAGAAACTCCGTACGGTGGTGGAATACGCCC
AGCTCTCCGGACGCGTATGCCGTCGAATTCCGATCTCTAGGGCCCTGGGA
GAAGGCGGGCTGGTCCCGCAAGAGGCGTGTCAAGGCCACTGTGACGTGTG
CAGTGGAGAGGTGAGGAAGAAGACGGCGAATGTGACCAGGGCGACGGTAG
GGTTGATTAAGTTGCTGAGGGGACTGGCGGCGAAGGAGAAGAGGTGCACG
CACCGACAACTAGCGGACTTGTGGTTGAAAGAGGCGAGAAAGGAAAGAAG
GGCTGCCGTGACCTACAAAAAGGAAAGAAAGAAGGCGACGGGTGGGGAGG
AAGAACAGGATGAAGATGAGGAGGGAGGGGAGGACGAGGAGGAGGACGAC
GAGAAAGGGAGAGAGATGGTCTTGCAGGACAAGGAGACCGTGGAGTTGTT
GTTGAACCAGCTGGTGGTCGAATCTATCTTGGGGGAGGACTACCATGCGA
CGGCCTACTCGATTAATGCTTATGTGGTGGTGGGATATCGGGCGGCAGTG
GTCGAGAGGGGGGAGATACAGGTTTGGATGGAGGTGGAGATATCGTCCTC
GTCCTCCTCCTCGACCTCGTCATCGATGGCGTCTGCGGCGGGGGCGTGGA
AGGATGGAAGGGATGGAGGGAGAGGAGGAGGGAAAAGAGGAGGAGGGAAA
GGAGGAGAGGGAAGGGAGGCCAAGAAGCGGAAGACAGAGCTCGGGGCTGC
TGCTTCGACTGCTGCTGTTTCTGTTGCTGCGGCTGCCGTCTGGGCCAATA
AGGTGGAGGAGGTAGTAGAGATCTCATCCGACTCCGAAGAAGAGAAGGTG
GACCGAAAGCAAGAAAAAGAGAGTAGGGAAGGTCAGGAGGACATGGAGGT
GGAAGACGGGGAGGAACCGGGGAGGGTGGGTGTCCATCAGGATGGAGAGG
AGGAAGAGGGTAAGGACGTGGAGATTTTTGACAAGGGCAAGGGAAAGAAA
AGTAGAACGATAACCGAGGGTGCCGAAGGCGAAGTGCTTCAAAATGGGAA
GGAGAAAGAAATGATGATGAAGAAAAAGAAAAAGCTGTGGAAGAGATTGC
AGAAGAAGGAGACAAGTAAAGAGGAGGAGGAGGAGGAGAAAGAGGAGAGT
GCTGGTGAGGAGTTCGACTTCTTTTCGTGATATACAGAGAAGGAGGGGAT
TTGGAACCCCCAACCAGAGTGATAGTAGAAACAGCAAAAGAATCGAATGC
GCGACAAAAAGTGCATGCGAGAGAGATCCACTGTACCAAAGAGAAAGTTG
TAAAGAAAAATCTATAGAGCGGCCCTGTCGGACGGACAAGTCTG
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protein sequence of NO16G01730.1

>NO16G01730.1-protein ID=NO16G01730.1-protein|Name=NO16G01730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=821bp
MVSTNAASKRAAADELRLVESKLSEVERQLRALKDERSTLLSRKVVLKET
VEAQDVAADVDWSSDSFPWSGEAERIKKEVFGIAAPWRPDQKEIINATLS
EMDTFVVMRTGGGKSLCFQLPALLPDKGLSLVISPLISLISDQCYQLESI
APGKGVMLAGAMSREESNDVLRRMKDPRSPLRLVYVTPEKVLTSKLLMST
LEKLNEAQRLDRFVVDEAHCCSSMGNDFRPEYQKLSILRKLFPHVPILAV
TATATPQVLRDVTDILQMSKVEFFKSPFNRPNLFYRVQPKPAGMDEAVAA
VWSFLRAQHPRQSGIVYCLSQKECETVAAKLALLGIATGVYHAGLDAELK
DRVLRRWTADKLQVVVATIAFGMGINKPDVRFVIHFSIPKSIENYLQESG
RAGRDGQISTCLLLYRASDVVRQASLVIHERVGLQKLRTVVEYAQLSGRV
CRRIPISRALGEGGLVPQEACQGHCDVCSGEVRKKTANVTRATVGLIKLL
RGLAAKEKRCTHRQLADLWLKEARKERRAAVTYKKERKKATGGEEEQDED
EEGGEDEEEDDEKGREMVLQDKETVELLLNQLVVESILGEDYHATAYSIN
AYVVVGYRAAVVERGEIQVWMEVEISSSSSSSTSSSMASAAGAWKDGRDG
GRGGGKRGGGKGGEGREAKKRKTELGAAASTAAVSVAAAAVWANKVEEVV
EISSDSEEEKVDRKQEKESREGQEDMEVEDGEEPGRVGVHQDGEEEEGKD
VEIFDKGKGKKSRTITEGAEGEVLQNGKEKEMMMKKKKKLWKRLQKKETS
KEEEEEEKEESAGEEFDFFS*
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Synonyms
Publications