NO16G01700, NO16G01700 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G01700 vs. NCBI_GenBank
Match: EWM23962.1 (proteasome a type [Nannochloropsis gaditana]) HSP 1 Score: 312.8 bits (800), Expect = 1.200e-81 Identity = 162/278 (58.27%), Postives = 204/278 (73.38%), Query Frame = 0 Query: 19 YDAFSTRIYDPKGRVLQLEYALEASKKGGAAVGAVGGDLAVLASWTPRTSRRQAPAAQQAALGLWRGDAHVAVAGTGLATDILALVEVARHECLAHRYVHESPLRVGRLVTRLAQDVYDTERHRIVPYALDLLVAGYD------SQGGPSLFKVGPAGVIESFRACAVGRRAEQGRAYLLGRLGEPQASXXXXXXXXLRRLATMVLRALLMTIVEEEGRGGEGRDREEEHQSVEEDISMVVIGKEISYTPLIVAWDPHRRRMEVRIPAALAAVLEDEE 291 YDAFSTRIYDPKGRVLQLEYALEA++KGGA VGAV GD +LASW PR+SRRQ P +Q ALGLW D ++A+AGTGLATD++AL ++AR+EC AHRY+H+SPLRVGRL LA++++DTERHRI+PYA+DLLVAGYD +G P LFK+ PAGVI+SFRACAVGR AE AYL +L + + LR AT+VL+AL+ ++ E+ GR +E +EED+S+ V+GK + YT L V+WDP RRM+V IP ALA E +E Sbjct: 39 YDAFSTRIYDPKGRVLQLEYALEAARKGGAVVGAVSGDFVILASWIPRSSRRQMPTTRQEALGLWHCDKNIALAGTGLATDVIALADLARNECRAHRYIHDSPLRVGRLTNLLAKEIHDTERHRILPYAVDLLVAGYDFEDDTGGRGRPGLFKIAPAGVIQSFRACAVGRGAEAAHAYLSEKL-QVSLAGDGNDGKSLREHATVVLQALVRSMTGED----SGRSVQESECCIEEDVSIAVVGKNLPYTSLFVSWDPWSRRMKVSIPKALAQRFERQE 311
BLAST of NO16G01700 vs. NCBI_GenBank
Match: XP_023271329.1 (proteasome subunit alpha type-1-like, partial [Seriola lalandi dorsalis]) HSP 1 Score: 109.4 bits (272), Expect = 2.000e-20 Identity = 64/166 (38.55%), Postives = 96/166 (57.83%), Query Frame = 0 Query: 27 YDPKGRVLQLEYALEASKKGGAAVGAVGGDLAVLASWTPRTSRRQAPAAQQAALGLWRGDAHVAVAGTGLATDILALVEVARHECLAHRYVHESPLRVGRLVTRLA-QDVYDTERHRIVPYALDLLVAGYDSQGGPSLFKVGPAGVIESFRACAVGRRAEQGRAYL 192 + P GR+ Q+EYA+EA G AA+G G AV+A T +R A +++ D ++ +A GL D L + R EC+ HRYV++ P++VGRLV ++A + T+R PY + LLVAG D+Q GP L++ P+GV + A+G R++ GR YL Sbjct: 1 WSPAGRIHQIEYAMEAVNVGSAAIGLRSGKYAVVA-----TLKRSASELSSYQKKIFKVDDNIGIAIAGLVADARVLAKFMRTECINHRYVYDEPMQVGRLVLKVADKSQVGTQRIGQRPYGVGLLVAGADAQ-GPHLYETKPSGVYFEYVGMAIGARSQAGRTYL 160
BLAST of NO16G01700 vs. NCBI_GenBank
Match: XP_004367445.1 (20S proteasome alpha subunit F, putative [Acanthamoeba castellanii str. Neff] >ELR20420.1 20S proteasome alpha subunit F, putative [Acanthamoeba castellanii str. Neff]) HSP 1 Score: 107.1 bits (266), Expect = 1.000e-19 Identity = 70/174 (40.23%), Postives = 105/174 (60.34%), Query Frame = 0 Query: 19 YDAFSTRIYDPKGRVLQLEYALEASKKGGAAVGAVGGDLAVLASWTPRTSRRQAPAAQQAALGLWRGDAHVAVAGTGLATDILALVEVARHECLAHRYVHESPLRVGRLVTRLA-QDVYDTERHRIVPYALDLLVAGYDSQGGPSLFKVGPAGVIESFRACAVGRRAEQGRAYL 192 YD+ T + P+GR+ Q+E+A+EA K+G A VG AVL T + S Q + Q+ +++ D H+A+A GL +D L + E L H+YV+ESP++VGRLV R+A + +T+R+ PY + LLVAGYD Q G L++ P+G ++A A+G RA+ R YL Sbjct: 6 YDSDIT-TWSPQGRLYQIEFAMEAVKQGSACVGLRSKTHAVLV--TLKRSSGQLASYQKK---IFKIDDHMAIAIAGLTSDARVLCRYMQTEALNHKYVYESPVQVGRLVLRVADKSQKNTQRYGSRPYGVGLLVAGYD-QTGAHLYETCPSGNYFEYKAQAIGARAQSARTYL 172
BLAST of NO16G01700 vs. NCBI_GenBank
Match: XP_002947343.1 (20S proteasome alpha subunit F [Volvox carteri f. nagariensis] >EFJ51391.1 20S proteasome alpha subunit F [Volvox carteri f. nagariensis]) HSP 1 Score: 106.3 bits (264), Expect = 1.700e-19 Identity = 81/250 (32.40%), Postives = 128/250 (51.20%), Query Frame = 0 Query: 17 VFYDAFSTRI--YDPKGRVLQLEYALEASKKGGAAVGAVGGDLAVLASWTPRTSRRQAPAAQQAALGLWRGDAHVAVAGTGLATDILALVEVARHECLAHRYVHESPLRVGRLVTRLAQDV-YDTERHRIVPYALDLLVAGYDSQGGPSLFKVGPAGVIESFRACAVGRRAEQGRAYLLGRLGEPQASXXXXXXXXLRRLATMVLRALLMTIVEEEGRGGEGRDREEEHQSVEEDISMVVIGKEISYTPL 264 +F + + T + + P+GR+ Q+EYA+EA K+G VG VLA T + S+ + + Q+ +++ D H+ +A GL D +L + R+EC+ HRYV+ES + VGRLV +A T+R PY + LLVAG DSQ GP L+ P+G ++A A+G R++ + YL + L L LRAL ++ E E + + S+ V+GK++S+T L Sbjct: 1 MFRNQYDTDVTTWSPQGRLFQVEYAMEAVKQGSCTVGLKSDTHVVLA--TLKRSQSELSSFQRK---VFKIDDHLGIAIAGLTGDGRSLCKYMRNECINHRYVYESSMPVGRLVRLVADKAQVCTQRSWKRPYGVGLLVAGVDSQ-GPHLYSTCPSGNYYEYKAMAIGSRSQAAKTYL-------EKHFETFPGANLDELVQHSLRALQASLSEGE--------------LTDANCSVAVVGKDLSFTVL 223
BLAST of NO16G01700 vs. NCBI_GenBank
Match: PRP83361.1 (hypothetical protein PROFUN_09389 [Planoprotostelium fungivorum]) HSP 1 Score: 105.5 bits (262), Expect = 2.900e-19 Identity = 63/167 (37.72%), Postives = 99/167 (59.28%), Query Frame = 0 Query: 26 IYDPKGRVLQLEYALEASKKGGAAVGAVGGDLAVLASWTPRTSRRQAPAAQQAALGLWRGDAHVAVAGTGLATDILALVEVARHECLAHRYVHESPLRVGRLVTRLA-QDVYDTERHRIVPYALDLLVAGYDSQGGPSLFKVGPAGVIESFRACAVGRRAEQGRAYL 192 I+ P+GR+ Q+EYA+EA K+G A+VG AV+A+ R S Q+ ++R D H+A++ +GL D L + R+ECL H++V+E P+ V +LV +LA + T++ PY + LLV GYD + GP L++ P+G ++A A+G R + R YL Sbjct: 12 IWSPQGRIHQIEYAMEAVKQGSASVGLKSKTHAVVAA-VKRASSELGSNQQK----VFRIDDHLAISMSGLTADGRVLTKYLRNECLNHKFVYEQPMPVSKLVVQLADKSQVHTQQSGRRPYGVGLLVIGYD-ENGPHLYETSPSGNYYDYKAQAIGNRFQSARTYL 172
BLAST of NO16G01700 vs. NCBI_GenBank
Match: PSC76956.1 (20S proteasome alpha subunit F [Micractinium conductrix]) HSP 1 Score: 105.1 bits (261), Expect = 3.800e-19 Identity = 63/179 (35.20%), Postives = 105/179 (58.66%), Query Frame = 0 Query: 16 SVFYDAFSTRI--YDPKGRVLQLEYALEASKKGGAAVGAVGGDLAVLASWTPRTSRRQAPAAQQAALGLWRGDAHVAVAGTGLATDILALVEVARHECLAHRYVHESPLRVGRLVTRLAQDVY-DTERHRIVPYALDLLVAGYDSQGGPSLFKVGPAGVIESFRACAVGRRAEQGRAYL 192 ++F + + T + + P+GR+ Q+EYA+EA K+G AAVG G+ AVLA T +R +++ D H+ +A +GL D L R+ECL HR+V++SP+ +GR+V ++A T+R PY + L+VAG+D + GP +F P+G ++A A+G R++ + Y+ Sbjct: 225 AMFRNQYDTDVTTWSPQGRIFQIEYAMEAVKQGSAAVGLKSGEHAVLA-----TLKRAPSDLSAYQRKIFKIDDHMGIAISGLTADGRILCRYMRNECLNHRFVYDSPMPLGRMVRQVADRAQAGTQRSWKRPYGVGLIVAGHD-ESGPRIFYNCPSGNYYDYKAFAMGARSQAAKTYM 397
BLAST of NO16G01700 vs. NCBI_GenBank
Match: XP_002770938.1 (proteasome A type subunit, putative [Perkinsus marinus ATCC 50983] >EER02754.1 proteasome A type subunit, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 104.8 bits (260), Expect = 5.000e-19 Identity = 62/168 (36.90%), Postives = 99/168 (58.93%), Query Frame = 0 Query: 27 YDPKGRVLQLEYALEASKKGGAAVGAVGGDLAVLASWTPRTSRRQAPAAQQAALGLWRGDAHVAVAGTGLATDILALVEVARHECLAHRYVHESPLRVGRLVTRLAQDVYDTERHRIV---PYALDLLVAGYDSQGGPSLFKVGPAGVIESFRACAVGRRAEQGRAYL 192 + P+GR+ Q+EYA+EA K+G A V G A+L ++ RRQ+ A ++R D H+ VA +GL D + R ECL+H++ +++P+ VGRLV ++ V E+ ++ PY + LLVAGYD + GP +++ P+G I + A A+G R++ R YL Sbjct: 13 WSPQGRIFQIEYAMEAVKQGTAVVALRGKKHAILCAF----RRRQSDLASYQQ-KIFRIDDHIGVAISGLTADARVICSFMRDECLSHKFTYDTPMSVGRLVNKIG--VESQEKTQVASKRPYGVGLLVAGYD-ENGPHIYETCPSGNIFEYYAMAIGGRSQSARTYL 172
BLAST of NO16G01700 vs. NCBI_GenBank
Match: XP_002778255.1 (proteasome A type subunit, putative [Perkinsus marinus ATCC 50983] >EER10050.1 proteasome A type subunit, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 104.8 bits (260), Expect = 5.000e-19 Identity = 62/168 (36.90%), Postives = 99/168 (58.93%), Query Frame = 0 Query: 27 YDPKGRVLQLEYALEASKKGGAAVGAVGGDLAVLASWTPRTSRRQAPAAQQAALGLWRGDAHVAVAGTGLATDILALVEVARHECLAHRYVHESPLRVGRLVTRLAQDVYDTERHRIV---PYALDLLVAGYDSQGGPSLFKVGPAGVIESFRACAVGRRAEQGRAYL 192 + P+GR+ Q+EYA+EA K+G A V G A+L ++ RRQ+ A ++R D H+ VA +GL D + R ECL+H++ +++P+ VGRLV ++ V E+ ++ PY + LLVAGYD + GP +++ P+G I + A A+G R++ R YL Sbjct: 13 WSPQGRIFQIEYAMEAVKQGTAVVALRGKKHAILCAF----RRRQSDLASYQQ-KIFRIDDHIGVAISGLTADARVICSFMRDECLSHKFTYDTPMSVGRLVNKIG--VESQEKTQVASKRPYGVGLLVAGYD-ENGPHIYETCPSGNIFEYYAMAIGGRSQSARTYL 172
BLAST of NO16G01700 vs. NCBI_GenBank
Match: XP_002786174.1 (proteasome A type subunit, putative [Perkinsus marinus ATCC 50983] >EER17970.1 proteasome A type subunit, putative [Perkinsus marinus ATCC 50983]) HSP 1 Score: 104.8 bits (260), Expect = 5.000e-19 Identity = 62/168 (36.90%), Postives = 99/168 (58.93%), Query Frame = 0 Query: 27 YDPKGRVLQLEYALEASKKGGAAVGAVGGDLAVLASWTPRTSRRQAPAAQQAALGLWRGDAHVAVAGTGLATDILALVEVARHECLAHRYVHESPLRVGRLVTRLAQDVYDTERHRIV---PYALDLLVAGYDSQGGPSLFKVGPAGVIESFRACAVGRRAEQGRAYL 192 + P+GR+ Q+EYA+EA K+G A V G A+L ++ RRQ+ A ++R D H+ VA +GL D + R ECL+H++ +++P+ VGRLV ++ V E+ ++ PY + LLVAGYD + GP +++ P+G I + A A+G R++ R YL Sbjct: 13 WSPQGRIFQIEYAMEAVKQGTAVVALRGEKHAILCAF----RRRQSDLASYQQ-KIFRIDDHIGVAISGLTADARVICSFMRDECLSHKFTYDTPMSVGRLVNKIG--VESQEKTQVASKRPYGVGLLVAGYD-ENGPHIYETCPSGNIFEYYAMAIGGRSQSARTYL 172
BLAST of NO16G01700 vs. NCBI_GenBank
Match: XP_011396562.1 (Proteasome subunit alpha type-1-A [Auxenochlorella protothecoides] >KFM23688.1 Proteasome subunit alpha type-1-A [Auxenochlorella protothecoides]) HSP 1 Score: 104.8 bits (260), Expect = 5.000e-19 Identity = 63/166 (37.95%), Postives = 96/166 (57.83%), Query Frame = 0 Query: 27 YDPKGRVLQLEYALEASKKGGAAVGAVGGDLAVLASWTPRTSRRQAPAAQQAALGLWRGDAHVAVAGTGLATDILALVEVARHECLAHRYVHESPLRVGRLVTRLAQDV-YDTERHRIVPYALDLLVAGYDSQGGPSLFKVGPAGVIESFRACAVGRRAEQGRAYL 192 + P+GR+ Q+EYA+EA K+G AAVG D+AV+A T +R +++ D H+ +A +GL D L R+ECL HR+V +SP+ +GRLV +LA T+R PY + L+VAG D + GP +F P+G +RA A+G R++ + Y+ Sbjct: 506 WSPQGRIFQIEYAMEAVKQGSAAVGLKSKDVAVMA-----TLKRAPSELSSYQRKVFKIDDHMGIAISGLTADGRILCRYMRNECLNHRFVFDSPMPLGRLVRQLADKAQVGTQRSWKRPYGVGLIVAGVD-ESGPHIFYNCPSGNYYDYRAFAMGARSQAAKTYM 665 The following BLAST results are available for this feature:
BLAST of NO16G01700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G01700 ID=NO16G01700|Name=NO16G01700|organism=Nannochloropsis oceanica|type=gene|length=915bpback to top protein sequence of NO16G01700.1 >NO16G01700.1-protein ID=NO16G01700.1-protein|Name=NO16G01700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=305bpback to top Synonyms
Publications
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