NO16G01600, NO16G01600 (gene) Nannochloropsis oceanica

Overview
NameNO16G01600
Unique NameNO16G01600
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2692
Alignment locationchr16:482602..485293 +

Link to JBrowse

Properties
Property NameValue
DescriptionSet domain protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:482602..485293 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR011011Znf_FYVE_PHD
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Homology
[Close]
BLAST of NO16G01600 vs. NCBI_GenBank
Match: EWM23968.1 (set domain protein [Nannochloropsis gaditana])

HSP 1 Score: 487.6 bits (1254), Expect = 6.700e-134
Identity = 283/603 (46.93%), Postives = 349/603 (57.88%), Query Frame = 0 
Query:    2 EPGMLMQCDAPNCRKVYHKPCLGMLAGGDQFFCPRHRCAICRVSEAELAAKSGKSKGAISGSKGRGVEVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANGSGSEAMHPVLWKCGSCPVAYCPSHLPPGLAP-------TGRQKYVAGDDSNQCSHCEHPAPRIQLAVLLERSWARLATNYLSLPFMRPFLNGAKRPSQKEGGREAAGWERP----LDIVEIGSKIRAGHYGTADEYLEDLFTLREQTVAFLQAAKXXXXXXXXXXXXXXXXXTGGLVEGTYAPVLEALDTLRGNAKRYLESNRKEIVKAEALVEEXXXXXXXXXXXXXXXXXXXXXXXXXXGGVAWRGELESL--TKCGEVGEYSPARTLEEWVEYVRKAPMIHVASQKPFPVLSEEAEREDMEKGEIARVISQMRFEDTWPHRSTLLQRDHLQAALEEQAGLLRRCMEGHALLRKSIAEEKSVVMEF------------SXXXXXXXXXXXXXXXXXXXXXXXXXXXHFVTMGDMHIVKELQISNGNLRARLESKHGLLQQREGQLWAARRAFEDVQEQNVRLREELAEARARV 580
            EPGML+QCDAP CRKVYHKPCLG    GD FFCPRHRCA+CR+SEA+L AK+ +     +      V   G                                                         +G E     LWKCGSCP+AYCPSHLPP LAP        G+QK V+ +DSNQC +C++P PRIQLAVLLERSWARLATNYL+LPFMRPFLNGA R S+     +A G +R     LD+V I  +IR GHY TADEYL DL  LREQ   F    +                      + +  P+LEALDTLRGNA RY+ES RK+I  AEAL+EE                           GVAWR EL  +   + G VGE++PA+ LEEW EYVR APM+H ++Q+PFP +SEEAEREDME+GE+ARVI+Q+RFED++P+++++ QRDHL+ ALEEQA LLRRC+EGHA LR+SIA EK+VV+E                                         H VT+GDMHI+KE Q++N NLRARL+SK+ LL+QRE QLWAA + F D+Q QN RL+EELA+A  R+
Sbjct:  392 EPGMLIQCDAPACRKVYHKPCLGFATWGDHFFCPRHRCAVCRISEADLDAKAKQGMAGTAPVGEMKVAALGNGSLTTHTRGASDHNGGETTLAPEAEKRSTVPEGSTSSSKTSKTKRDQ------CEPTGDERR---LWKCGSCPLAYCPSHLPPALAPMVAPVTMMGKQK-VSNEDSNQCINCKNPPPRIQLAVLLERSWARLATNYLALPFMRPFLNGAVR-SKSNRRSKAGGNDRDEDALLDVVGIAHRIRTGHYQTADEYLHDLDVLREQVFNFSPTEEGGRSVGEADK------------DTSILPILEALDTLRGNAGRYVESIRKKIAPAEALIEE-EEKQMSRGSGLTGSKAASGNDTGGGSGVAWRAELVEIKGLQWGSVGEFTPAKPLEEWAEYVRMAPMLHASTQRPFPDMSEEAEREDMERGEVARVIAQLRFEDSFPYKTSMSQRDHLEGALEEQATLLRRCLEGHAQLRRSIANEKAVVLELPGKEARRRKKRSRDEVEGGSREGGLGREDGEEVNGWDDDDHVVTLGDMHILKEFQVANQNLRARLKSKNALLRQREAQLWAAEKEFLDLQGQNSRLQEELAQALVRI 970
[Close]
BLAST of NO16G01600 vs. NCBI_GenBank
Match: CCI40796.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 105.1 bits (261), Expect = 9.400e-19
Identity = 146/643 (22.71%), Postives = 227/643 (35.30%), Query Frame = 0 
Query:    4 GMLMQCDAPNCRKVYHKPCLGML----AGGDQFFCPRHRCAICRVSEAELAAKSGKSKGAISGSKGRGVEVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANGSGSEA--MHPVLWKCGSCPVAYCPSHLPPGLAPTGRQKYVAGDDSNQCSHCEHPAP-RIQLAVLLERSWARLATNYLSLPFMRPFLNGAKRPSQKEGGREAAGWERPLDIVEIGSKIRAGHYGTADEYLEDLFTLREQTVAFLQAAKXXXXXXXXXXXXXXXXXTGGLVEGTYAPVLEALDTLRGNAKRYLES--NRKEIVKAEALVEEXXXXXXXXXXXXXXXXXXXXXXXXXXGGVAWRGELES---LTKCGEVGEYSPARTLEEWVEYVRKAPM-------------IHVA----------------------------------------------SQKPFPVLSEEAEREDMEKGEIARVISQMRFEDTWPHRSTLLQRDHLQAALEEQAGLLRRCMEGHALLRKSIAEEKSVVMEFSXXXXXXXXXXXXXXXXXXXXXXXXXXXHFVTMGDMHIVKELQISNGNLRARLESKHGLLQQ---REGQLWAARRAFEDVQEQNVRLREEL 573
            G ++ CDAP C KVYH+ CLG      +    +FCPRH CA+   SE E       S   +S S                                                                NG           LWKC  CP+A     LPP L P   Q       S  C  C + AP R+QLA LLER W+ LATN    PF  P LNG      K+   +A      +D+  I SKIRA  Y T+  ++ D+  + E  +                           L++G   P++E+  +L+  +  ++ +  +R ++V+ + L ++                            + WR E +    L +      Y  AR+LEEW  +V KA M             +H A                                              SQK  PV SE+ E +  +  +++  +S    +D +   ST      +Q   ++Q+ +LR+ +EGHA+LRK+  +    ++  +                             +T+G+  +  EL+++N NLRARL  K  ++++      +L A  R   +  E + R  EEL
Sbjct:  351 GEVVICDAPECTKVYHQFCLGEFPFPRSEDATWFCPRHTCAVTHTSELE------DSDTYLSSS----------------------------------------------------IQPCDNVPIARVNGVSPRKTWTRKTLWKCIKCPLALSERALPP-LLPAQIQS--RKQRSFLCVFCGNDAPLRVQLAKLLERVWSNLATNRQGYPFCGPLLNGLDASDHKDCSPKAV----RMDLFTILSKIRALKYETSSAFVRDIDRVVEDALE--------------------------LIDGRSMPLIESATSLKIVSTEHMMNLRHRIDLVERKHLPQQQKVKVNTATVWP----------------IPWRKECKGDDILLRTIGSAMYVEARSLEEWTAFVCKASMYVTTSKPPKSNSQVHSASDGNRKMKDSISDEDTSALQHHGSDNQIGCSPGLTLEEGVNALTSLSQKQKPVKSEQLEFQTQDGNQMSEEVSD---KDFFLSPST----TEMQHMFDQQSSVLRQALEGHAVLRKTWKQFGQEILSTNQHQRG------------------------LTIGEGRLAAELRLANRNLRARLRQKDHMIERLTNEHARLRAEFRQLSNELEASRRHSEEL 855
[Close]
BLAST of NO16G01600 vs. NCBI_GenBank
Match: CCI40797.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 105.1 bits (261), Expect = 9.400e-19
Identity = 146/643 (22.71%), Postives = 227/643 (35.30%), Query Frame = 0 
Query:    4 GMLMQCDAPNCRKVYHKPCLGML----AGGDQFFCPRHRCAICRVSEAELAAKSGKSKGAISGSKGRGVEVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANGSGSEA--MHPVLWKCGSCPVAYCPSHLPPGLAPTGRQKYVAGDDSNQCSHCEHPAP-RIQLAVLLERSWARLATNYLSLPFMRPFLNGAKRPSQKEGGREAAGWERPLDIVEIGSKIRAGHYGTADEYLEDLFTLREQTVAFLQAAKXXXXXXXXXXXXXXXXXTGGLVEGTYAPVLEALDTLRGNAKRYLES--NRKEIVKAEALVEEXXXXXXXXXXXXXXXXXXXXXXXXXXGGVAWRGELES---LTKCGEVGEYSPARTLEEWVEYVRKAPM-------------IHVA----------------------------------------------SQKPFPVLSEEAEREDMEKGEIARVISQMRFEDTWPHRSTLLQRDHLQAALEEQAGLLRRCMEGHALLRKSIAEEKSVVMEFSXXXXXXXXXXXXXXXXXXXXXXXXXXXHFVTMGDMHIVKELQISNGNLRARLESKHGLLQQ---REGQLWAARRAFEDVQEQNVRLREEL 573
            G ++ CDAP C KVYH+ CLG      +    +FCPRH CA+   SE E       S   +S S                                                                NG           LWKC  CP+A     LPP L P   Q       S  C  C + AP R+QLA LLER W+ LATN    PF  P LNG      K+   +A      +D+  I SKIRA  Y T+  ++ D+  + E  +                           L++G   P++E+  +L+  +  ++ +  +R ++V+ + L ++                            + WR E +    L +      Y  AR+LEEW  +V KA M             +H A                                              SQK  PV SE+ E +  +  +++  +S    +D +   ST      +Q   ++Q+ +LR+ +EGHA+LRK+  +    ++  +                             +T+G+  +  EL+++N NLRARL  K  ++++      +L A  R   +  E + R  EEL
Sbjct:  354 GEVVICDAPECTKVYHQFCLGEFPFPRSEDATWFCPRHTCAVTHTSELE------DSDTYLSSS----------------------------------------------------IQPCDNVPIARVNGVSPRKTWTRKTLWKCIKCPLALSERALPP-LLPAQIQS--RKQRSFLCVFCGNDAPLRVQLAKLLERVWSNLATNRQGYPFCGPLLNGLDASDHKDCSPKAV----RMDLFTILSKIRALKYETSSAFVRDIDRVVEDALE--------------------------LIDGRSMPLIESATSLKIVSTEHMMNLRHRIDLVERKHLPQQQKVKVNTATVWP----------------IPWRKECKGDDILLRTIGSAMYVEARSLEEWTAFVCKASMYVTTSKPPKSNSQVHSASDGNRKMKDSISDEDTSALQHHGSDNQIGCSPGLTLEEGVNALTSLSQKQKPVKSEQLEFQTQDGNQMSEEVSD---KDFFLSPST----TEMQHMFDQQSSVLRQALEGHAVLRKTWKQFGQEILSTNQHQRG------------------------LTIGEGRLAAELRLANRNLRARLRQKDHMIERLTNEHARLRAEFRQLSNELEASRRHSEEL 858
[Close]
BLAST of NO16G01600 vs. NCBI_GenBank
Match: CCI40798.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 105.1 bits (261), Expect = 9.400e-19
Identity = 146/643 (22.71%), Postives = 227/643 (35.30%), Query Frame = 0 
Query:    4 GMLMQCDAPNCRKVYHKPCLGML----AGGDQFFCPRHRCAICRVSEAELAAKSGKSKGAISGSKGRGVEVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANGSGSEA--MHPVLWKCGSCPVAYCPSHLPPGLAPTGRQKYVAGDDSNQCSHCEHPAP-RIQLAVLLERSWARLATNYLSLPFMRPFLNGAKRPSQKEGGREAAGWERPLDIVEIGSKIRAGHYGTADEYLEDLFTLREQTVAFLQAAKXXXXXXXXXXXXXXXXXTGGLVEGTYAPVLEALDTLRGNAKRYLES--NRKEIVKAEALVEEXXXXXXXXXXXXXXXXXXXXXXXXXXGGVAWRGELES---LTKCGEVGEYSPARTLEEWVEYVRKAPM-------------IHVA----------------------------------------------SQKPFPVLSEEAEREDMEKGEIARVISQMRFEDTWPHRSTLLQRDHLQAALEEQAGLLRRCMEGHALLRKSIAEEKSVVMEFSXXXXXXXXXXXXXXXXXXXXXXXXXXXHFVTMGDMHIVKELQISNGNLRARLESKHGLLQQ---REGQLWAARRAFEDVQEQNVRLREEL 573
            G ++ CDAP C KVYH+ CLG      +    +FCPRH CA+   SE E       S   +S S                                                                NG           LWKC  CP+A     LPP L P   Q       S  C  C + AP R+QLA LLER W+ LATN    PF  P LNG      K+   +A      +D+  I SKIRA  Y T+  ++ D+  + E  +                           L++G   P++E+  +L+  +  ++ +  +R ++V+ + L ++                            + WR E +    L +      Y  AR+LEEW  +V KA M             +H A                                              SQK  PV SE+ E +  +  +++  +S    +D +   ST      +Q   ++Q+ +LR+ +EGHA+LRK+  +    ++  +                             +T+G+  +  EL+++N NLRARL  K  ++++      +L A  R   +  E + R  EEL
Sbjct:  360 GEVVICDAPECTKVYHQFCLGEFPFPRSEDATWFCPRHTCAVTHTSELE------DSDTYLSSS----------------------------------------------------IQPCDNVPIARVNGVSPRKTWTRKTLWKCIKCPLALSERALPP-LLPAQIQS--RKQRSFLCVFCGNDAPLRVQLAKLLERVWSNLATNRQGYPFCGPLLNGLDASDHKDCSPKAV----RMDLFTILSKIRALKYETSSAFVRDIDRVVEDALE--------------------------LIDGRSMPLIESATSLKIVSTEHMMNLRHRIDLVERKHLPQQQKVKVNTATVWP----------------IPWRKECKGDDILLRTIGSAMYVEARSLEEWTAFVCKASMYVTTSKPPKSNSQVHSASDGNRKMKDSISDEDTSALQHHGSDNQIGCSPGLTLEEGVNALTSLSQKQKPVKSEQLEFQTQDGNQMSEEVSD---KDFFLSPST----TEMQHMFDQQSSVLRQALEGHAVLRKTWKQFGQEILSTNQHQRG------------------------LTIGEGRLAAELRLANRNLRARLRQKDHMIERLTNEHARLRAEFRQLSNELEASRRHSEEL 864
[Close]
BLAST of NO16G01600 vs. NCBI_GenBank
Match: CCI40799.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 105.1 bits (261), Expect = 9.400e-19
Identity = 146/643 (22.71%), Postives = 227/643 (35.30%), Query Frame = 0 
Query:    4 GMLMQCDAPNCRKVYHKPCLGML----AGGDQFFCPRHRCAICRVSEAELAAKSGKSKGAISGSKGRGVEVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANGSGSEA--MHPVLWKCGSCPVAYCPSHLPPGLAPTGRQKYVAGDDSNQCSHCEHPAP-RIQLAVLLERSWARLATNYLSLPFMRPFLNGAKRPSQKEGGREAAGWERPLDIVEIGSKIRAGHYGTADEYLEDLFTLREQTVAFLQAAKXXXXXXXXXXXXXXXXXTGGLVEGTYAPVLEALDTLRGNAKRYLES--NRKEIVKAEALVEEXXXXXXXXXXXXXXXXXXXXXXXXXXGGVAWRGELES---LTKCGEVGEYSPARTLEEWVEYVRKAPM-------------IHVA----------------------------------------------SQKPFPVLSEEAEREDMEKGEIARVISQMRFEDTWPHRSTLLQRDHLQAALEEQAGLLRRCMEGHALLRKSIAEEKSVVMEFSXXXXXXXXXXXXXXXXXXXXXXXXXXXHFVTMGDMHIVKELQISNGNLRARLESKHGLLQQ---REGQLWAARRAFEDVQEQNVRLREEL 573
            G ++ CDAP C KVYH+ CLG      +    +FCPRH CA+   SE E       S   +S S                                                                NG           LWKC  CP+A     LPP L P   Q       S  C  C + AP R+QLA LLER W+ LATN    PF  P LNG      K+   +A      +D+  I SKIRA  Y T+  ++ D+  + E  +                           L++G   P++E+  +L+  +  ++ +  +R ++V+ + L ++                            + WR E +    L +      Y  AR+LEEW  +V KA M             +H A                                              SQK  PV SE+ E +  +  +++  +S    +D +   ST      +Q   ++Q+ +LR+ +EGHA+LRK+  +    ++  +                             +T+G+  +  EL+++N NLRARL  K  ++++      +L A  R   +  E + R  EEL
Sbjct:  348 GEVVICDAPECTKVYHQFCLGEFPFPRSEDATWFCPRHTCAVTHTSELE------DSDTYLSSS----------------------------------------------------IQPCDNVPIARVNGVSPRKTWTRKTLWKCIKCPLALSERALPP-LLPAQIQS--RKQRSFLCVFCGNDAPLRVQLAKLLERVWSNLATNRQGYPFCGPLLNGLDASDHKDCSPKAV----RMDLFTILSKIRALKYETSSAFVRDIDRVVEDALE--------------------------LIDGRSMPLIESATSLKIVSTEHMMNLRHRIDLVERKHLPQQQKVKVNTATVWP----------------IPWRKECKGDDILLRTIGSAMYVEARSLEEWTAFVCKASMYVTTSKPPKSNSQVHSASDGNRKMKDSISDEDTSALQHHGSDNQIGCSPGLTLEEGVNALTSLSQKQKPVKSEQLEFQTQDGNQMSEEVSD---KDFFLSPST----TEMQHMFDQQSSVLRQALEGHAVLRKTWKQFGQEILSTNQHQRG------------------------LTIGEGRLAAELRLANRNLRARLRQKDHMIERLTNEHARLRAEFRQLSNELEASRRHSEEL 852
[Close]
BLAST of NO16G01600 vs. NCBI_GenBank
Match: CCI40800.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 105.1 bits (261), Expect = 9.400e-19
Identity = 146/643 (22.71%), Postives = 227/643 (35.30%), Query Frame = 0 
Query:    4 GMLMQCDAPNCRKVYHKPCLGML----AGGDQFFCPRHRCAICRVSEAELAAKSGKSKGAISGSKGRGVEVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANGSGSEA--MHPVLWKCGSCPVAYCPSHLPPGLAPTGRQKYVAGDDSNQCSHCEHPAP-RIQLAVLLERSWARLATNYLSLPFMRPFLNGAKRPSQKEGGREAAGWERPLDIVEIGSKIRAGHYGTADEYLEDLFTLREQTVAFLQAAKXXXXXXXXXXXXXXXXXTGGLVEGTYAPVLEALDTLRGNAKRYLES--NRKEIVKAEALVEEXXXXXXXXXXXXXXXXXXXXXXXXXXGGVAWRGELES---LTKCGEVGEYSPARTLEEWVEYVRKAPM-------------IHVA----------------------------------------------SQKPFPVLSEEAEREDMEKGEIARVISQMRFEDTWPHRSTLLQRDHLQAALEEQAGLLRRCMEGHALLRKSIAEEKSVVMEFSXXXXXXXXXXXXXXXXXXXXXXXXXXXHFVTMGDMHIVKELQISNGNLRARLESKHGLLQQ---REGQLWAARRAFEDVQEQNVRLREEL 573
            G ++ CDAP C KVYH+ CLG      +    +FCPRH CA+   SE E       S   +S S                                                                NG           LWKC  CP+A     LPP L P   Q       S  C  C + AP R+QLA LLER W+ LATN    PF  P LNG      K+   +A      +D+  I SKIRA  Y T+  ++ D+  + E  +                           L++G   P++E+  +L+  +  ++ +  +R ++V+ + L ++                            + WR E +    L +      Y  AR+LEEW  +V KA M             +H A                                              SQK  PV SE+ E +  +  +++  +S    +D +   ST      +Q   ++Q+ +LR+ +EGHA+LRK+  +    ++  +                             +T+G+  +  EL+++N NLRARL  K  ++++      +L A  R   +  E + R  EEL
Sbjct:  376 GEVVICDAPECTKVYHQFCLGEFPFPRSEDATWFCPRHTCAVTHTSELE------DSDTYLSSS----------------------------------------------------IQPCDNVPIARVNGVSPRKTWTRKTLWKCIKCPLALSERALPP-LLPAQIQS--RKQRSFLCVFCGNDAPLRVQLAKLLERVWSNLATNRQGYPFCGPLLNGLDASDHKDCSPKAV----RMDLFTILSKIRALKYETSSAFVRDIDRVVEDALE--------------------------LIDGRSMPLIESATSLKIVSTEHMMNLRHRIDLVERKHLPQQQKVKVNTATVWP----------------IPWRKECKGDDILLRTIGSAMYVEARSLEEWTAFVCKASMYVTTSKPPKSNSQVHSASDGNRKMKDSISDEDTSALQHHGSDNQIGCSPGLTLEEGVNALTSLSQKQKPVKSEQLEFQTQDGNQMSEEVSD---KDFFLSPST----TEMQHMFDQQSSVLRQALEGHAVLRKTWKQFGQEILSTNQHQRG------------------------LTIGEGRLAAELRLANRNLRARLRQKDHMIERLTNEHARLRAEFRQLSNELEASRRHSEEL 880
[Close]
BLAST of NO16G01600 vs. NCBI_GenBank
Match: CCI40801.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 105.1 bits (261), Expect = 9.400e-19
Identity = 146/643 (22.71%), Postives = 227/643 (35.30%), Query Frame = 0 
Query:    4 GMLMQCDAPNCRKVYHKPCLGML----AGGDQFFCPRHRCAICRVSEAELAAKSGKSKGAISGSKGRGVEVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANGSGSEA--MHPVLWKCGSCPVAYCPSHLPPGLAPTGRQKYVAGDDSNQCSHCEHPAP-RIQLAVLLERSWARLATNYLSLPFMRPFLNGAKRPSQKEGGREAAGWERPLDIVEIGSKIRAGHYGTADEYLEDLFTLREQTVAFLQAAKXXXXXXXXXXXXXXXXXTGGLVEGTYAPVLEALDTLRGNAKRYLES--NRKEIVKAEALVEEXXXXXXXXXXXXXXXXXXXXXXXXXXGGVAWRGELES---LTKCGEVGEYSPARTLEEWVEYVRKAPM-------------IHVA----------------------------------------------SQKPFPVLSEEAEREDMEKGEIARVISQMRFEDTWPHRSTLLQRDHLQAALEEQAGLLRRCMEGHALLRKSIAEEKSVVMEFSXXXXXXXXXXXXXXXXXXXXXXXXXXXHFVTMGDMHIVKELQISNGNLRARLESKHGLLQQ---REGQLWAARRAFEDVQEQNVRLREEL 573
            G ++ CDAP C KVYH+ CLG      +    +FCPRH CA+   SE E       S   +S S                                                                NG           LWKC  CP+A     LPP L P   Q       S  C  C + AP R+QLA LLER W+ LATN    PF  P LNG      K+   +A      +D+  I SKIRA  Y T+  ++ D+  + E  +                           L++G   P++E+  +L+  +  ++ +  +R ++V+ + L ++                            + WR E +    L +      Y  AR+LEEW  +V KA M             +H A                                              SQK  PV SE+ E +  +  +++  +S    +D +   ST      +Q   ++Q+ +LR+ +EGHA+LRK+  +    ++  +                             +T+G+  +  EL+++N NLRARL  K  ++++      +L A  R   +  E + R  EEL
Sbjct:  370 GEVVICDAPECTKVYHQFCLGEFPFPRSEDATWFCPRHTCAVTHTSELE------DSDTYLSSS----------------------------------------------------IQPCDNVPIARVNGVSPRKTWTRKTLWKCIKCPLALSERALPP-LLPAQIQS--RKQRSFLCVFCGNDAPLRVQLAKLLERVWSNLATNRQGYPFCGPLLNGLDASDHKDCSPKAV----RMDLFTILSKIRALKYETSSAFVRDIDRVVEDALE--------------------------LIDGRSMPLIESATSLKIVSTEHMMNLRHRIDLVERKHLPQQQKVKVNTATVWP----------------IPWRKECKGDDILLRTIGSAMYVEARSLEEWTAFVCKASMYVTTSKPPKSNSQVHSASDGNRKMKDSISDEDTSALQHHGSDNQIGCSPGLTLEEGVNALTSLSQKQKPVKSEQLEFQTQDGNQMSEEVSD---KDFFLSPST----TEMQHMFDQQSSVLRQALEGHAVLRKTWKQFGQEILSTNQHQRG------------------------LTIGEGRLAAELRLANRNLRARLRQKDHMIERLTNEHARLRAEFRQLSNELEASRRHSEEL 874
[Close]
BLAST of NO16G01600 vs. NCBI_GenBank
Match: CCI40802.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 105.1 bits (261), Expect = 9.400e-19
Identity = 146/643 (22.71%), Postives = 227/643 (35.30%), Query Frame = 0 
Query:    4 GMLMQCDAPNCRKVYHKPCLGML----AGGDQFFCPRHRCAICRVSEAELAAKSGKSKGAISGSKGRGVEVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANGSGSEA--MHPVLWKCGSCPVAYCPSHLPPGLAPTGRQKYVAGDDSNQCSHCEHPAP-RIQLAVLLERSWARLATNYLSLPFMRPFLNGAKRPSQKEGGREAAGWERPLDIVEIGSKIRAGHYGTADEYLEDLFTLREQTVAFLQAAKXXXXXXXXXXXXXXXXXTGGLVEGTYAPVLEALDTLRGNAKRYLES--NRKEIVKAEALVEEXXXXXXXXXXXXXXXXXXXXXXXXXXGGVAWRGELES---LTKCGEVGEYSPARTLEEWVEYVRKAPM-------------IHVA----------------------------------------------SQKPFPVLSEEAEREDMEKGEIARVISQMRFEDTWPHRSTLLQRDHLQAALEEQAGLLRRCMEGHALLRKSIAEEKSVVMEFSXXXXXXXXXXXXXXXXXXXXXXXXXXXHFVTMGDMHIVKELQISNGNLRARLESKHGLLQQ---REGQLWAARRAFEDVQEQNVRLREEL 573
            G ++ CDAP C KVYH+ CLG      +    +FCPRH CA+   SE E       S   +S S                                                                NG           LWKC  CP+A     LPP L P   Q       S  C  C + AP R+QLA LLER W+ LATN    PF  P LNG      K+   +A      +D+  I SKIRA  Y T+  ++ D+  + E  +                           L++G   P++E+  +L+  +  ++ +  +R ++V+ + L ++                            + WR E +    L +      Y  AR+LEEW  +V KA M             +H A                                              SQK  PV SE+ E +  +  +++  +S    +D +   ST      +Q   ++Q+ +LR+ +EGHA+LRK+  +    ++  +                             +T+G+  +  EL+++N NLRARL  K  ++++      +L A  R   +  E + R  EEL
Sbjct:  373 GEVVICDAPECTKVYHQFCLGEFPFPRSEDATWFCPRHTCAVTHTSELE------DSDTYLSSS----------------------------------------------------IQPCDNVPIARVNGVSPRKTWTRKTLWKCIKCPLALSERALPP-LLPAQIQS--RKQRSFLCVFCGNDAPLRVQLAKLLERVWSNLATNRQGYPFCGPLLNGLDASDHKDCSPKAV----RMDLFTILSKIRALKYETSSAFVRDIDRVVEDALE--------------------------LIDGRSMPLIESATSLKIVSTEHMMNLRHRIDLVERKHLPQQQKVKVNTATVWP----------------IPWRKECKGDDILLRTIGSAMYVEARSLEEWTAFVCKASMYVTTSKPPKSNSQVHSASDGNRKMKDSISDEDTSALQHHGSDNQIGCSPGLTLEEGVNALTSLSQKQKPVKSEQLEFQTQDGNQMSEEVSD---KDFFLSPST----TEMQHMFDQQSSVLRQALEGHAVLRKTWKQFGQEILSTNQHQRG------------------------LTIGEGRLAAELRLANRNLRARLRQKDHMIERLTNEHARLRAEFRQLSNELEASRRHSEEL 877
[Close]
BLAST of NO16G01600 vs. NCBI_GenBank
Match: CCI40803.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 105.1 bits (261), Expect = 9.400e-19
Identity = 146/643 (22.71%), Postives = 227/643 (35.30%), Query Frame = 0 
Query:    4 GMLMQCDAPNCRKVYHKPCLGML----AGGDQFFCPRHRCAICRVSEAELAAKSGKSKGAISGSKGRGVEVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANGSGSEA--MHPVLWKCGSCPVAYCPSHLPPGLAPTGRQKYVAGDDSNQCSHCEHPAP-RIQLAVLLERSWARLATNYLSLPFMRPFLNGAKRPSQKEGGREAAGWERPLDIVEIGSKIRAGHYGTADEYLEDLFTLREQTVAFLQAAKXXXXXXXXXXXXXXXXXTGGLVEGTYAPVLEALDTLRGNAKRYLES--NRKEIVKAEALVEEXXXXXXXXXXXXXXXXXXXXXXXXXXGGVAWRGELES---LTKCGEVGEYSPARTLEEWVEYVRKAPM-------------IHVA----------------------------------------------SQKPFPVLSEEAEREDMEKGEIARVISQMRFEDTWPHRSTLLQRDHLQAALEEQAGLLRRCMEGHALLRKSIAEEKSVVMEFSXXXXXXXXXXXXXXXXXXXXXXXXXXXHFVTMGDMHIVKELQISNGNLRARLESKHGLLQQ---REGQLWAARRAFEDVQEQNVRLREEL 573
            G ++ CDAP C KVYH+ CLG      +    +FCPRH CA+   SE E       S   +S S                                                                NG           LWKC  CP+A     LPP L P   Q       S  C  C + AP R+QLA LLER W+ LATN    PF  P LNG      K+   +A      +D+  I SKIRA  Y T+  ++ D+  + E  +                           L++G   P++E+  +L+  +  ++ +  +R ++V+ + L ++                            + WR E +    L +      Y  AR+LEEW  +V KA M             +H A                                              SQK  PV SE+ E +  +  +++  +S    +D +   ST      +Q   ++Q+ +LR+ +EGHA+LRK+  +    ++  +                             +T+G+  +  EL+++N NLRARL  K  ++++      +L A  R   +  E + R  EEL
Sbjct:  367 GEVVICDAPECTKVYHQFCLGEFPFPRSEDATWFCPRHTCAVTHTSELE------DSDTYLSSS----------------------------------------------------IQPCDNVPIARVNGVSPRKTWTRKTLWKCIKCPLALSERALPP-LLPAQIQS--RKQRSFLCVFCGNDAPLRVQLAKLLERVWSNLATNRQGYPFCGPLLNGLDASDHKDCSPKAV----RMDLFTILSKIRALKYETSSAFVRDIDRVVEDALE--------------------------LIDGRSMPLIESATSLKIVSTEHMMNLRHRIDLVERKHLPQQQKVKVNTATVWP----------------IPWRKECKGDDILLRTIGSAMYVEARSLEEWTAFVCKASMYVTTSKPPKSNSQVHSASDGNRKMKDSISDEDTSALQHHGSDNQIGCSPGLTLEEGVNALTSLSQKQKPVKSEQLEFQTQDGNQMSEEVSD---KDFFLSPST----TEMQHMFDQQSSVLRQALEGHAVLRKTWKQFGQEILSTNQHQRG------------------------LTIGEGRLAAELRLANRNLRARLRQKDHMIERLTNEHARLRAEFRQLSNELEASRRHSEEL 871
[Close]
BLAST of NO16G01600 vs. NCBI_GenBank
Match: CCI40804.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 105.1 bits (261), Expect = 9.400e-19
Identity = 146/643 (22.71%), Postives = 227/643 (35.30%), Query Frame = 0 
Query:    4 GMLMQCDAPNCRKVYHKPCLGML----AGGDQFFCPRHRCAICRVSEAELAAKSGKSKGAISGSKGRGVEVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLANGSGSEA--MHPVLWKCGSCPVAYCPSHLPPGLAPTGRQKYVAGDDSNQCSHCEHPAP-RIQLAVLLERSWARLATNYLSLPFMRPFLNGAKRPSQKEGGREAAGWERPLDIVEIGSKIRAGHYGTADEYLEDLFTLREQTVAFLQAAKXXXXXXXXXXXXXXXXXTGGLVEGTYAPVLEALDTLRGNAKRYLES--NRKEIVKAEALVEEXXXXXXXXXXXXXXXXXXXXXXXXXXGGVAWRGELES---LTKCGEVGEYSPARTLEEWVEYVRKAPM-------------IHVA----------------------------------------------SQKPFPVLSEEAEREDMEKGEIARVISQMRFEDTWPHRSTLLQRDHLQAALEEQAGLLRRCMEGHALLRKSIAEEKSVVMEFSXXXXXXXXXXXXXXXXXXXXXXXXXXXHFVTMGDMHIVKELQISNGNLRARLESKHGLLQQ---REGQLWAARRAFEDVQEQNVRLREEL 573
            G ++ CDAP C KVYH+ CLG      +    +FCPRH CA+   SE E       S   +S S                                                                NG           LWKC  CP+A     LPP L P   Q       S  C  C + AP R+QLA LLER W+ LATN    PF  P LNG      K+   +A      +D+  I SKIRA  Y T+  ++ D+  + E  +                           L++G   P++E+  +L+  +  ++ +  +R ++V+ + L ++                            + WR E +    L +      Y  AR+LEEW  +V KA M             +H A                                              SQK  PV SE+ E +  +  +++  +S    +D +   ST      +Q   ++Q+ +LR+ +EGHA+LRK+  +    ++  +                             +T+G+  +  EL+++N NLRARL  K  ++++      +L A  R   +  E + R  EEL
Sbjct:  382 GEVVICDAPECTKVYHQFCLGEFPFPRSEDATWFCPRHTCAVTHTSELE------DSDTYLSSS----------------------------------------------------IQPCDNVPIARVNGVSPRKTWTRKTLWKCIKCPLALSERALPP-LLPAQIQS--RKQRSFLCVFCGNDAPLRVQLAKLLERVWSNLATNRQGYPFCGPLLNGLDASDHKDCSPKAV----RMDLFTILSKIRALKYETSSAFVRDIDRVVEDALE--------------------------LIDGRSMPLIESATSLKIVSTEHMMNLRHRIDLVERKHLPQQQKVKVNTATVWP----------------IPWRKECKGDDILLRTIGSAMYVEARSLEEWTAFVCKASMYVTTSKPPKSNSQVHSASDGNRKMKDSISDEDTSALQHHGSDNQIGCSPGLTLEEGVNALTSLSQKQKPVKSEQLEFQTQDGNQMSEEVSD---KDFFLSPST----TEMQHMFDQQSSVLRQALEGHAVLRKTWKQFGQEILSTNQHQRG------------------------LTIGEGRLAAELRLANRNLRARLRQKDHMIERLTNEHARLRAEFRQLSNELEASRRHSEEL 886
The following BLAST results are available for this feature:
BLAST of NO16G01600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM23968.16.700e-13446.93set domain protein [Nannochloropsis gaditana][more]
CCI40796.19.400e-1922.71unnamed protein product [Albugo candida][more]
CCI40797.19.400e-1922.71unnamed protein product [Albugo candida][more]
CCI40798.19.400e-1922.71unnamed protein product [Albugo candida][more]
CCI40799.19.400e-1922.71unnamed protein product [Albugo candida][more]
CCI40800.19.400e-1922.71unnamed protein product [Albugo candida][more]
CCI40801.19.400e-1922.71unnamed protein product [Albugo candida][more]
CCI40802.19.400e-1922.71unnamed protein product [Albugo candida][more]
CCI40803.19.400e-1922.71unnamed protein product [Albugo candida][more]
CCI40804.19.400e-1922.71unnamed protein product [Albugo candida][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL150nonsL150Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G01600.1NO16G01600.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|80795gene_6041Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G01600.1NO16G01600.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G01600 ID=NO16G01600|Name=NO16G01600|organism=Nannochloropsis oceanica|type=gene|length=2692bp
ATGGAGCCCGGGATGCTGATGCAGTGCGATGCGCCCAACTGCCGGAAAGT
GTACCATAAGCCTTGTTTAGGGATGTTGGCGGGAGGGGATCAGTTCTTCT
GCCCGCGGCACCGGTGTGCGATTTGCCGTGTGTCGGAGGCGGAACTTGCG
GCCAAGAGCGGGAAAAGTAAGGGTGCTATCAGTGGCAGTAAGGGGAGGGG
GGTGGAGGTGAGTGGTGGTGATGGCGGTGAGAAGAATGACAGGGGTGGGG
CCTCAGATGTGGACGATGACGCCAGCACAACAGCAGCTGGAGCAGCAGCA
ACCGCAGCAGTAACAGACGGCAAGCCCAACAGCAGCAGCAAGAAGACTAG
CACCAGCAATAGCAGCAAGAGGAAGCTTGCAAACGGTAGTGGATCGGAGG
CCATGCATCCCGTTCTCTGGAAATGCGGGTCGTGTCCAGTTGCTTACTGC
CCCTCCCACCTTCCCCCCGGCTTGGCCCCGACGGGCCGTCAAAAGTATGT
GGCGGGCGATGACTCTAATCAATGTTCTCACTGCGAACATCCTGCCCCAC
GGATCCAGCTTGCTGTCTTGTTAGAACGGTCTTGGGCTCGCCTAGCCACC
AATTATTTATCTTTGCCCTTCATGCGTCCTTTTTTGAATGGCGCAAAGCG
ACCATCGCAGAAGGAGGGAGGTAGGGAGGCAGCGGGGTGGGAGCGGCCGT
TGGATATTGTTGAGATTGGTTCGAAGATCCGCGCGGGGCACTATGGCACG
GCGGATGAATACTTGGAGGACCTCTTCACGTTGAGAGAACAGACTGTGGC
TTTTTTACAAGCAGCGAAGCCGGCGGAGAAGGCGGAGAAGGCGGAGCAGC
TGCAGCAGCAGCAGCGGAAAACTGGTGGATTGGTGGAAGGAACATATGCT
CCTGTGTTAGAAGCACTCGACACGTTGCGAGGGAATGCGAAGAGATATTT
GGAGTCAAATCGAAAGGAGATTGTCAAGGCTGAGGCCTTGGTTGAGGAAG
AGGAGGAGGGCTCGACACCTGGTGCTGGAGCTGTAGCAGCAGCAACAGCA
GCAGTAGCGACGGGCCCTGGCATTGGGGGTGGTGTCGCCTGGCGAGGTGA
GCTGGAATCCTTGACGAAATGTGGGGAAGTGGGGGAGTACAGCCCGGCAC
GGACTTTGGAGGAATGGGTGGAGTACGTGAGAAAAGCCCCAATGATTCAT
GTGGCGAGTCAGAAGCCGTTCCCTGTGTTGTCGGAGGAGGCGGAGAGGGA
AGACATGGAGAAAGGAGAAATCGCTAGAGTTATTTCCCAGATGCGGTTTG
AGGATACATGGCCTCATCGGTCGACGTTACTACAGAGGGATCACTTACAA
GCTGCCTTAGAGGAGCAGGCTGGATTGTTGAGACGATGCATGGAGGGGCA
TGCTTTGCTTAGGAAGAGTATCGCAGAAGAGAAGAGTGTGGTGATGGAAT
TTTCGGTTAAAAAACGAAGAAGGAGGGAGGGAGGGAGGGACTGTGGGAGA
GAGGAAGAGGAGGAGGAGGGGCTGGAGGAGGACGATCACTTTGTGACCAT
GGGCGATATGCATATAGTGAAGGAGCTTCAGATTTCGAACGGGAATCTGA
GGGCTCGGTTGGAAAGTAAACATGGATTATTGCAGCAACGCGAGGGTCAG
CTGTGGGCGGCCAGGAGGGCGTTTGAAGATGTACAGGAGCAAAATGTGCG
GTTGCGGGAGGAGTTGGCCGAGGCACGAGCGAGGGTGGGGGGGTTAGAGG
AAAAGATTAAAAAGAGGAAGGAGAGCGAGGTGCCCATGGAGTGGGTGATG
GGTCGTTCTGTGGAGGGGACGGCCGAAGGCAACCAGAGAGAGGTTGGGAA
GGAAAGGGAGCGGGACAGTGTCTCCGCTAAGCTCCAGAATCTCCTGCAGC
CGCAGCACCAACAACAGCAGCAGCAGCAACAACAAAAACAACAGCAGCAA
CCGCAGCTGCATCAGAAGGAGGGGGAGGATTATGATGATGATGATGATGA
TGAGGAGGAGGAGGAGCAACAGCAGCAGCAGCAAACTGTCGCTACATCTC
CATCCACCACCCCGACAACGTTGTCCACTCTCCCAGAAGAGCAACAACTT
CATAAAGATGTGAACAAGGACGGGGACGAGGAGGAGGTCGAGATGCTGGG
TAGTGCATCTCCGCCAGCTACCGTCTCGGCGGCAACCACCACGATCAACA
GCAGCAGCAGCGGGGGAAGCGGTGGCGTCGAGATGGAGGGAGAGGACGCT
AACAACTCTTTCTAGGCTAAAACCTCTATCTAGAATTTTCTGCCTTACAC
CTCATTCTAGAAATTAGAGCTTTTTGTGCCTTTCTCTTTTTTGAGGGAGA
AGTTGGCATTCCCATAAATTTTTCCTGGGCTGATGTGGGAAGAGGAAAAT
TATAAAATGAGTGAAAGTCGTCTTACGAGCCCACCGAAGGGCAGAAATGC
AATGGGAAAGTAGATAGAGGGACAACAGAAATGCGATGTGGCGTGATGTG
AGGTGAGGAAATAGTGAAACTACCAGCAACAAGCAAACCAACTAAGAATC
TCAAAGTGCTCAAAAACTACGAAGCTGAGTAGTGGAGGGAAAAGGTGGAA
GATGAAGAAAGAACTAGAGCTCTAACCACTTCTAGATACATGGCCGCAAA
AATGATAATGACAACAATGAACTTAGTCAGTTACTCGTCGAC
back to top

protein sequence of NO16G01600.1

>NO16G01600.1-protein ID=NO16G01600.1-protein|Name=NO16G01600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=755bp
MEPGMLMQCDAPNCRKVYHKPCLGMLAGGDQFFCPRHRCAICRVSEAELA
AKSGKSKGAISGSKGRGVEVSGGDGGEKNDRGGASDVDDDASTTAAGAAA
TAAVTDGKPNSSSKKTSTSNSSKRKLANGSGSEAMHPVLWKCGSCPVAYC
PSHLPPGLAPTGRQKYVAGDDSNQCSHCEHPAPRIQLAVLLERSWARLAT
NYLSLPFMRPFLNGAKRPSQKEGGREAAGWERPLDIVEIGSKIRAGHYGT
ADEYLEDLFTLREQTVAFLQAAKPAEKAEKAEQLQQQQRKTGGLVEGTYA
PVLEALDTLRGNAKRYLESNRKEIVKAEALVEEEEEGSTPGAGAVAAATA
AVATGPGIGGGVAWRGELESLTKCGEVGEYSPARTLEEWVEYVRKAPMIH
VASQKPFPVLSEEAEREDMEKGEIARVISQMRFEDTWPHRSTLLQRDHLQ
AALEEQAGLLRRCMEGHALLRKSIAEEKSVVMEFSVKKRRRREGGRDCGR
EEEEEEGLEEDDHFVTMGDMHIVKELQISNGNLRARLESKHGLLQQREGQ
LWAARRAFEDVQEQNVRLREELAEARARVGGLEEKIKKRKESEVPMEWVM
GRSVEGTAEGNQREVGKERERDSVSAKLQNLLQPQHQQQQQQQQQKQQQQ
PQLHQKEGEDYDDDDDDEEEEEQQQQQQTVATSPSTTPTTLSTLPEEQQL
HKDVNKDGDEEEVEMLGSASPPATVSAATTTINSSSSGGSGGVEMEGEDA
NNSF*
back to top
Synonyms
Publications