NO16G01550, NO16G01550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G01550 vs. NCBI_GenBank
Match: EWM23972.1 (endonuclease iii [Nannochloropsis gaditana]) HSP 1 Score: 415.6 bits (1067), Expect = 1.600e-112 Identity = 209/305 (68.52%), Postives = 235/305 (77.05%), Query Frame = 0 Query: 63 AGAENEDGTVQIAAADPVTPPAIAAKEKSTGAEIAPRKKTKNISTSSIAAAAPARTIKPKAVPKPKKAASPPFSPHPLWQQQLEHIRKMREAGPAAPVDLFGCAELGKRHATSPEHMRLQTLISSMLSSQTTDLVNEKAMGRLYEACGITIEGLEELGEEGIGEVIKPVSFYTAKSANIIKVCKILKEEYAGDIPRTFEDLMSLPGVGPKMAILVCAYGWGEVVGICVDTHVHRISNRLGWANTWNYKNPKAQNPEKTRKLLESWMPRENWEEVNPLLVGLGQQTCRAVNPKCWECSLTAICPSY 368 A AE E A P K+K+T +IAP S A + P+ KKAA PPF P+P W+ QLE IR+MR+ APVDLFGC+ELG+R ATSPEHMR QTLISSMLSSQTTDLVNEKAMGRL++ACGITIEGLE LGEEGI + IKPVSFYTAK+ NI+KVC ILK +Y GDIPRTFE+LM LPGVGPKMA LVCAYGWGE+VGICVDTHVHRISNRLGWANTWN+KN KAQNPEKTRKLLESWMP+E+W+EVNPLLVGLGQQTCRA+ PKC +C L A+CPSY Sbjct: 77 AAAEEESLAATTAVPSEDAAPVARGKKKNTLPDIAPCSTGHEGKKSGGAKS-----------PRSKKAALPPFIPNPRWRDQLEIIREMRK-DATAPVDLFGCSELGRRKATSPEHMRFQTLISSMLSSQTTDLVNEKAMGRLFDACGITIEGLEALGEEGIVQAIKPVSFYTAKAGNILKVCAILKTQYTGDIPRTFEELMQLPGVGPKMATLVCAYGWGEIVGICVDTHVHRISNRLGWANTWNFKNHKAQNPEKTRKLLESWMPKEHWKEVNPLLVGLGQQTCRAIAPKCGDCKLAAVCPSY 369
BLAST of NO16G01550 vs. NCBI_GenBank
Match: CBJ31456.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 227.3 bits (578), Expect = 8.100e-56 Identity = 126/267 (47.19%), Postives = 155/267 (58.05%), Query Frame = 0 Query: 109 SIAAAAPARTIKPKAVPKPKKAASPPFSPHPLWQQQLEHIRKMREAGPAAPVDLFGCAELGKRHATSPEHMRLQTLISSMLSSQTTDLVNEKAMGRLYEACGITIEGLEEL-----GEEGIGEVIKPVSFYTAKSANIIKVCKILKE----EYAGDIPRTFEDLMSLPGVGPKMAILVCAYGWGEVVGICVDTHVHRISNRLGWANTWNYKNPKAQNPEKTRKLLESWMPRENWEEVNPLLVGLGQQTCRAVNPKCWECSLTAICPS 367 SI AA P + K + P P W++Q+E IR +R + AA VD G L A S + +R Q L+S+MLSSQT D V + R+ +AC G L E+ + E++ PVSF K+ +I+ VCK L E AG IP T E L+ LPGVGPKM LV WG GICVDTHVHRISNRLGW +TWN PKAQNPEKTRK L+ W+PRE+W EVN LLVG GQQ C A P C C ++ +CPS Sbjct: 12 SIMAANKNAPASP-PIRKTTRIPIPTEPPQEKWREQMEGIRSVRRSRDAA-VDFAGAGALRDSSAGSEDDVRFQVLMSAMLSSQTKDPVTAAGLNRMRQACAPAPLGAAALLATGMDEDALTELLHPVSFKKTKAKHILMVCKRLAEAEDGRQAGAIPDTVEGLLELPGVGPKMTYLVMDVAWGRNEGICVDTHVHRISNRLGWVDTWNRNRPKAQNPEKTRKHLQGWLPREHWSEVNELLVGFGQQVCFATRPSCSACGISGLCPS 276
BLAST of NO16G01550 vs. NCBI_GenBank
Match: CCA28012.1 (conserved unknown protein putative [Albugo laibachii Nc14]) HSP 1 Score: 226.9 bits (577), Expect = 1.100e-55 Identity = 121/236 (51.27%), Postives = 155/236 (65.68%), Query Frame = 0 Query: 136 SPHPLWQQQLEHIRKMREAGPAAPVDLFGCAELGKRHATSPEHM-RLQTLISSMLSSQTTDLVNEKAMGRLYEACGITIEGLEELGEEGIGEVIKPVSFYTAKSANIIKVCKILKEEYAG----DIPRTFEDLMSLPGVGPKMAILVCAYGWGEVVGICVDTHVHRISNRLGWANTWNYKNPKAQNPEKTRKLLESWMPRENWEEVNPLLVGLGQQTCRAVNPKCWECSLTAICPS 367 +P+ W + L IR+MR A A VD G P H+ R LIS+MLSSQT D +N AM RL + +T+E + ++ E+ + ++I PVSFY K+ +I KV ILKE + DIP T E+L++LPGVGPKMA LV W + VGICVDTHVHRI NRLGW +TWN KNPKAQ+PEKTRK LE+W+P E+W+ +N LLVG GQ C A PKC +C+L +ICPS Sbjct: 81 TPNVNWNEMLLKIREMR-ATMKAEVDEDGSETF--YDTKHPAHVARFHVLISAMLSSQTKDPINAAAMRRLLDN-ELTVESMIKIKEDKLAQIIYPVSFYRNKAKSIKKVASILKERESEDGICDIPETVENLVALPGVGPKMAYLVMNVAWNKPVGICVDTHVHRICNRLGWVSTWNKKNPKAQDPEKTRKELEAWLPSEHWDSINQLLVGFGQTICHARQPKCKDCALQSICPS 312
BLAST of NO16G01550 vs. NCBI_GenBank
Match: XP_021817916.1 (endonuclease III homolog 1, chloroplastic [Prunus avium]) HSP 1 Score: 223.8 bits (569), Expect = 8.900e-55 Identity = 111/230 (48.26%), Postives = 148/230 (64.35%), Query Frame = 0 Query: 137 PHPLWQQQLEHIRKMREAGPAAPVDLFGCAELGKRHATSPEHMRLQTLISSMLSSQTTDLVNEKAMGRLYEACGITIEGLEELGEEGIGEVIKPVSFYTAKSANIIKVCKILKEEYAGDIPRTFEDLMSLPGVGPKMAILVCAYGWGEVVGICVDTHVHRISNRLGWANTWNYKNPKAQNPEKTRKLLESWMPRENWEEVNPLLVGLGQQTCRAVNPKCWECSLTAICPS 367 P W++ LE IRKMR + APVD GC + G A P+ R L+SS+LSSQT D VN A+ RL + ++ + +++ E I +I PV FYT K+ N+ K+ KI +Y GDIP + ++L+SLPG+GPKMA LV GW V GICVDTHVHRISNRLGW + K K NPE+TR+ L+ W+P+E W+ +NPLLVG GQ C + P+C CS++ CPS Sbjct: 112 PPANWEKVLEGIRKMR-SSEDAPVDSMGCEKAGS--ALPPKERRFAVLVSSLLSSQTKDHVNHGAIQRLLQNNLLSADSIDKADEATIKSLIYPVGFYTRKATNLKKIAKICLTKYDGDIPSSLDELLSLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRISNRLGWVSRPGRKQ-KTSNPEETREALQLWLPKEEWDPINPLLVGFGQTVCTPLRPRCGMCSVSEFCPS 337
BLAST of NO16G01550 vs. NCBI_GenBank
Match: XP_008222537.1 (PREDICTED: endonuclease III homolog 1, chloroplastic [Prunus mume]) HSP 1 Score: 223.4 bits (568), Expect = 1.200e-54 Identity = 111/230 (48.26%), Postives = 147/230 (63.91%), Query Frame = 0 Query: 137 PHPLWQQQLEHIRKMREAGPAAPVDLFGCAELGKRHATSPEHMRLQTLISSMLSSQTTDLVNEKAMGRLYEACGITIEGLEELGEEGIGEVIKPVSFYTAKSANIIKVCKILKEEYAGDIPRTFEDLMSLPGVGPKMAILVCAYGWGEVVGICVDTHVHRISNRLGWANTWNYKNPKAQNPEKTRKLLESWMPRENWEEVNPLLVGLGQQTCRAVNPKCWECSLTAICPS 367 P W++ LE IRKMR + APVD GC + G A P+ R L+SS+LSSQT D VN A+ RL + ++ + +++ E I +I PV FYT K+ N+ K+ KI +Y GDIP + ++L+SLPG+GPKMA LV GW V GICVDTHVHRISNRLGW + K K NPE+TR+ L+ W+P+E W+ +NPLLVG GQ C + P+C CS+ CPS Sbjct: 112 PPANWEKVLEGIRKMR-SSEGAPVDSMGCEKAGS--ALPPKERRFAVLVSSLLSSQTKDHVNHGAIQRLLQNNLLSADSIDKADEATIKGLIYPVGFYTRKATNLKKIAKICLTKYDGDIPSSLDELLSLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRISNRLGWVSRPGRKQ-KTSNPEETREALQLWLPKEEWDPINPLLVGFGQTVCTPLRPRCGVCSVNEFCPS 337
BLAST of NO16G01550 vs. NCBI_GenBank
Match: PNY15235.1 (endonuclease iii-like protein 1-like [Trifolium pratense]) HSP 1 Score: 223.4 bits (568), Expect = 1.200e-54 Identity = 112/226 (49.56%), Postives = 141/226 (62.39%), Query Frame = 0 Query: 141 WQQQLEHIRKMREAGPAAPVDLFGCAELGKRHATSPEHMRLQTLISSMLSSQTTDLVNEKAMGRLYEACGITIEGLEELGEEGIGEVIKPVSFYTAKSANIIKVCKILKEEYAGDIPRTFEDLMSLPGVGPKMAILVCAYGWGEVVGICVDTHVHRISNRLGWANTWNYKNPKAQNPEKTRKLLESWMPRENWEEVNPLLVGLGQQTCRAVNPKCWECSLTAICPS 367 W + LE IRKMR +G APVD GC + G P+ R L+SS+LSSQT D VN A+ RL + +T + + EE I ++I PV FYT K+ N+ K+ I +Y GDIP T E L+ LPG+GPKMA LV W V GICVDTHVHRI NRLGW + K K PE+TR L+ W+PRE W+ +NPLLVG GQ C + P+C ECS+T +CPS Sbjct: 110 WVETLEGIRKMRCSGD-APVDTMGCEKAGS--TLPPKERRFAVLVSSLLSSQTKDHVNHGAIQRLLQNDLLTPDAINNAEEETIKKLIYPVGFYTRKATNLKKIANICLMKYGGDIPSTLEQLLLLPGIGPKMAHLVMNVAWNNVQGICVDTHVHRICNRLGWVSRLGTKQ-KTSTPEETRVSLQGWLPREEWDPINPLLVGFGQTICTPLRPRCGECSITELCPS 331
BLAST of NO16G01550 vs. NCBI_GenBank
Match: OQS06523.1 (endonuclease III 1 [Thraustotheca clavata]) HSP 1 Score: 222.6 bits (566), Expect = 2.000e-54 Identity = 106/226 (46.90%), Postives = 146/226 (64.60%), Query Frame = 0 Query: 141 WQQQLEHIRKMREAGPAAPVDLFGCAELGKRHATSPEHMRLQTLISSMLSSQTTDLVNEKAMGRLYEACGITIEGLEELGEEGIGEVIKPVSFYTAKSANIIKVCKILKEEYAGDIPRTFEDLMSLPGVGPKMAILVCAYGWGEVVGICVDTHVHRISNRLGWANTWNYKNPKAQNPEKTRKLLESWMPRENWEEVNPLLVGLGQQTCRAVNPKCWECSLTAICPS 367 W++ + I MR A A VD GC + P R L++SMLSSQT D V AM RL E G+T+E + + + ++++PV F+ K+ + K C IL+++Y DIP TF++L++LPGVGPKMA L + W + VGICVD HVHRISNRLGW TWN +NPK+Q+PEKTRK LE W+P + W +N +LVG GQ+ C VNP+C +C++ +CPS Sbjct: 100 WEEVWDGIAAMR-AQKTAAVDSQGCESFNDL-SLEPNVRRFHVLVASMLSSQTKDPVTAAAMERLKEH-GLTVENILATEKAKLAQILRPVGFFNNKATYLHKTCTILRDQYNSDIPSTFDELIALPGVGPKMAHLTMSAAWEKTVGICVDVHVHRISNRLGWVKTWNKQNPKSQDPEKTRKELEDWLPYDRWNPINAMLVGFGQEICFPVNPRCSDCTVRHLCPS 322
BLAST of NO16G01550 vs. NCBI_GenBank
Match: AAW24987.1 (SJCHGC01733 protein [Schistosoma japonicum]) HSP 1 Score: 222.2 bits (565), Expect = 2.600e-54 Identity = 118/226 (52.21%), Postives = 148/226 (65.49%), Query Frame = 0 Query: 141 WQQQLEHIRKMREAGPAAPVDLFGCAELGKRHATSPEHMRLQTLISSMLSSQTTDLVNEKAMGRLYEACGITIEGLEELGEEGIGEVIKPVSFYTAKSANIIKVCKILKEEYAGDIPRTFEDLMSLPGVGPKMAILVCAYGWGEVVGICVDTHVHRISNRLGWANTWNYKNPKAQNPEKTRKLLESWMPRENWEEVNPLLVGLGQQTCRAVNPKCWECSLTAICPS 367 W+ QL +IRKMRE+ APVDL GC +L P+ RLQ LIS MLSSQT D V AM RL ++ G T+ L ++ E + E+I PV FY K+ NI K C+I+K++Y DIP+T ++L +LPGVGPKMA L W +V GI VDTHVHRI+NRL W+ K P + PE+TR LE W+PRE W+E+N LLVG GQQ CR VNP C C +ICPS Sbjct: 34 WRTQLNNIRKMRESRD-APVDLMGCEKLAD-ETEHPKTFRLQVLISLMLSSQTKDQVTAAAMERL-KSKGCTLAMLTDMKTEDLEELIYPVGFYKTKALNIKKTCEIIKQKYDSDIPKTVKELCTLPGVGPKMAYLAMKCAWKKVTGIGVDTHVHRITNRLKWS-----KRP-TKTPEETRMALEEWLPREYWDEINLLLVGFGQQICRPVNPNCMGCLNRSICPS 250
BLAST of NO16G01550 vs. NCBI_GenBank
Match: XP_017220870.1 (PREDICTED: endonuclease III homolog 1, chloroplastic-like [Daucus carota subsp. sativus]) HSP 1 Score: 222.2 bits (565), Expect = 2.600e-54 Identity = 123/267 (46.07%), Postives = 158/267 (59.18%), Query Frame = 0 Query: 100 KKTKNISTSSIAAAAPARTIKPKAVPKPKKAASPPFSPHPLWQQQLEHIRKMREAGPAAPVDLFGCAELGKRHATSPEHMRLQTLISSMLSSQTTDLVNEKAMGRLYEACGITIEGLEELGEEGIGEVIKPVSFYTAKSANIIKVCKILKEEYAGDIPRTFEDLMSLPGVGPKMAILVCAYGWGEVVGICVDTHVHRISNRLGWANTWNYKNPKAQNPEKTRKLLESWMPRENWEEVNPLLVGLGQQTCRAVNPKCWECSLTAICPS 367 KKT IS + + V + A PP + W + LE IRKMR + APVD GC + G + P+ R LIS++LSSQT D VN A+ RL E +T + LE+ E+ I +I PV FYT K++N+ KV I +Y GDIP T EDL+ LPG+GPKMA LV GW V GICVDTHVHRI NRLGW + N K ++PE+TR+ LE W+P+E W +NPLLVG GQ C + P+C CS+ +CPS Sbjct: 85 KKTSKISELRNCESTSGSDVPNAGVFPILRTAKPPGN----WAKVLEGIRKMR-SFEDAPVDSMGCEKAGS--SLPPKERRFAVLISALLSSQTKDHVNHGAIQRLLENNLLTADALEKANEDTIKSMIYPVGFYTRKASNMKKVANICLSKYDGDIPSTLEDLLQLPGIGPKMAHLVMNVGWNNVQGICVDTHVHRICNRLGWVSR-KGTNQKTKSPEETRESLERWLPKEEWVPINPLLVGFGQTICTPLRPQCGRCSIVDLCPS 343
BLAST of NO16G01550 vs. NCBI_GenBank
Match: XP_012195157.1 (hypothetical protein SPRG_01561 [Saprolegnia parasitica CBS 223.65] >KDO34426.1 hypothetical protein SPRG_01561 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 221.9 bits (564), Expect = 3.400e-54 Identity = 116/246 (47.15%), Postives = 153/246 (62.20%), Query Frame = 0 Query: 121 PKAVPKPKKAASPPFSPHPLWQQQLEHIRKMREAGPAAPVDLFGCAELGKRHATSPEHMRLQTLISSMLSSQTTDLVNEKAMGRLYEACGITIEGLEELGEEGIGEVIKPVSFYTAKSANIIKVCKILKEEYAGDIPRTFEDLMSLPGVGPKMAILVCAYGWGEVVGICVDTHVHRISNRLGWANTWNYKNPKAQNPEKTRKLLESWMPRENWEEVNPLLVGLGQQTCRAVNPKCWECSLTAICPS 367 P K KK + P + W+Q + I MR A A VD GC E + +P R L++SMLSSQT D V AM RL + G+T+ + + ++++PV F+ K+ + K C IL+E+YA DIP TF++LM+LPGVGPKMA L + W + VGICVD HVHRISNRLGW TWN +NPK+Q+PEKTRK LE W+P E W VN LLVG GQ+ C +NP+C C++ +CPS Sbjct: 22 PDGDVKVKKQKAEPAN----WEQVWDGITFMR-AERTAAVDNQGC-ESFNDPSLAPPLRRFHVLVASMLSSQTKDPVTAAAMERL-KKHGLTVANILATDRNELAQILRPVGFFNNKATYLHKTCAILQEKYASDIPPTFDELMALPGVGPKMAHLTMSAAWEKTVGICVDVHVHRISNRLGWVKTWNKQNPKSQDPEKTRKELEDWLPYEKWNPVNALLVGFGQEVCHPLNPRCDVCTVAHLCPS 260 The following BLAST results are available for this feature:
BLAST of NO16G01550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G01550 ID=NO16G01550|Name=NO16G01550|organism=Nannochloropsis oceanica|type=gene|length=1829bpback to top protein sequence of NO16G01550.1 >NO16G01550.1-protein ID=NO16G01550.1-protein|Name=NO16G01550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=372bpback to top Synonyms
Publications
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