NO16G01210, NO16G01210 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G01210 vs. NCBI_GenBank
Match: EWM24009.1 (rieske (2fe-2s) region protein [Nannochloropsis gaditana]) HSP 1 Score: 377.1 bits (967), Expect = 3.300e-101 Identity = 181/196 (92.35%), Postives = 189/196 (96.43%), Query Frame = 0 Query: 1 MKVAAVLLALCATTQAFVPQFARPSPRAGPLAAGPQASDGSIRVKSVKAKDEWVPLLKATDIAPGDIIPVESKGLQLLLVADYDGSVYCVANVCPHLGTPLDQGSLGDGTIVCPLHKSAFSLESGELVGDWCPFPPVLGPLVLGKLQPPRDLAVFQVRSRGSDIEALLNINLKADFESKYWAGLLDAQGKATGDYY 197 MKVAA+LLALCATTQAFVP A+P+PRA P+AAG Q DGSIRVK VKAKDEWVPLLKATDIAPGDIIPVESKGLQLLLVADYDGSVYCVAN+CPHLGTPLDQGSLGDGTIVCPLHKSAFSLE+GELVGDWCPFPPVLGPLVLGKLQPPRDLAVFQVRSRGSDIEAL+N+NLKADFESKYWAGLLDAQGKATGDYY Sbjct: 1 MKVAAILLALCATTQAFVPFAAKPAPRAAPVAAGKQNPDGSIRVKGVKAKDEWVPLLKATDIAPGDIIPVESKGLQLLLVADYDGSVYCVANICPHLGTPLDQGSLGDGTIVCPLHKSAFSLETGELVGDWCPFPPVLGPLVLGKLQPPRDLAVFQVRSRGSDIEALVNVNLKADFESKYWAGLLDAQGKATGDYY 196
BLAST of NO16G01210 vs. NCBI_GenBank
Match: CBN77428.1 (ferredoxin component [Ectocarpus siliculosus]) HSP 1 Score: 236.5 bits (602), Expect = 7.100e-59 Identity = 117/199 (58.79%), Postives = 146/199 (73.37%), Query Frame = 0 Query: 1 MKVAAVL--LALCATTQAFVPQFARPSPRAGPLAAGPQASDGSIRVKSVKAKDEWVPLLKATDIAPGDIIPVESKGLQLLLVADYDGSVYCVANVCPHLGTPLDQGSL-GDGTIVCPLHKSAFSLESGELVGDWCPFPPVLGPLVLGKLQPPRDLAVFQVRSRGSDIEALLNINLKADFESKYWAGLLDAQGKATGDYY 197 MKV+ V+ +A AFV A + R G + G S ++ VK K+EWVP+LK +DIAPG+++ V G +LL+ AD GS+Y AN+CPHLGTPLDQGS+ G +VCPLHKSAFSLE G+LVGDWCPFPPVLGPLVLG+L+P +DLAVF VR+ G +I+ L+N NLK +FESKYW GLLDAQGKA+GDYY Sbjct: 1 MKVSGVVCFMAAAGAANAFV---APSATRLGAVTRG--ESSLNMAVKKPAKKEEWVPVLKTSDIAPGELVGVTQDGQELLIAADLKGSIYATANICPHLGTPLDQGSINAAGALVCPLHKSAFSLEDGKLVGDWCPFPPVLGPLVLGRLEPAKDLAVFPVRASGGNIQVLINRNLKQEFESKYWTGLLDAQGKASGDYY 194
BLAST of NO16G01210 vs. NCBI_GenBank
Match: CEM05161.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 216.5 bits (550), Expect = 7.600e-53 Identity = 95/145 (65.52%), Postives = 117/145 (80.69%), Query Frame = 0 Query: 52 EWVPLLKATDIAPGDIIPVESKGLQLLLVADYDGSVYCVANVCPHLGTPLDQGSLGDGTIVCPLHKSAFSLESGELVGDWCPFPPVLGPLVLGKLQPPRDLAVFQVRSRGSDIEALLNINLKADFESKYWAGLLDAQGKATGDYY 197 EW +L +IA GD++PV+ GL LLLVAD DGS+YCVANVCPH+GTPL+QG + DG +VCPLH++AFSLESGE+VGDWCPFPP++GPL GKL+PP++LA F VR RG IE L++ + KA+FE YW GLLDAQGKA G YY Sbjct: 79 EWKAVLNDDEIAAGDLVPVQVNGLNLLLVADADGSIYCVANVCPHIGTPLEQGEVKDGKVVCPLHRTAFSLESGEVVGDWCPFPPLVGPLT-GKLRPPQNLATFPVRQRGRTIEVLVDSSAKANFEKNYWKGLLDAQGKADGSYY 222
BLAST of NO16G01210 vs. NCBI_GenBank
Match: CEM00673.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 214.2 bits (544), Expect = 3.800e-52 Identity = 97/172 (56.40%), Postives = 123/172 (71.51%), Query Frame = 0 Query: 25 SPRAGPLAAGPQASDGSIRVKSVKAKDEWVPLLKATDIAPGDIIPVESKGLQLLLVADYDGSVYCVANVCPHLGTPLDQGSLGDGTIVCPLHKSAFSLESGELVGDWCPFPPVLGPLVLGKLQPPRDLAVFQVRSRGSDIEALLNINLKADFESKYWAGLLDAQGKATGDYY 197 SP P+ S ++ EW +L +IA GD++PV+ GL LLLVAD DGS+YCVANVCPH+GTPL+QG + DG ++CPLH++AFSLE GE+VG+WCPFPP++GPL GKL+PP++LA F VR RG IE L++ N KA+FE YW GLLDAQGKA G YY Sbjct: 52 SPSLYQARHAPRTSLQAVFGGKTTTAQEWKAVLNDDEIAAGDLVPVQVNGLNLLLVADTDGSIYCVANVCPHIGTPLEQGEVKDGKVICPLHRTAFSLEKGEVVGEWCPFPPLVGPLT-GKLRPPQNLATFPVRQRGRTIEVLVDSNTKANFEKNYWKGLLDAQGKADGSYY 222
BLAST of NO16G01210 vs. NCBI_GenBank
Match: XP_005711696.1 (Ferredoxin component [Chondrus crispus] >CDF41402.1 Ferredoxin component [Chondrus crispus]) HSP 1 Score: 196.8 bits (499), Expect = 6.200e-47 Identity = 86/154 (55.84%), Postives = 112/154 (72.73%), Query Frame = 0 Query: 43 RVKSVKAKDEWVPLLKATDIAPGDIIPVESKGLQLLLVADYDGSVYCVANVCPHLGTPLDQGSLGDGTIVCPLHKSAFSLESGELVGDWCPFPPVLGPLVLGKLQPPRDLAVFQVRSRGSDIEALLNINLKADFESKYWAGLLDAQGKATGDYY 197 R V +D WVPLL ++I+PG++ V + G Q+L+ DYDG VY AN+CPHLGTPL GS+GDG + C HKS++ L +GEL GDWCPFPP++GP VLGKLQ PR L ++ VR IEALL+++ KAD+E +YW G+LDA GKATG Y+ Sbjct: 35 RSSLVMKQDAWVPLLDTSEISPGELKGVVTAGQQILVSCDYDGQVYASANICPHLGTPLTDGSVGDGVLTCTQHKSSWDLSTGELAGDWCPFPPLIGP-VLGKLQGPRPLTIYPVRENAGRIEALLDVDAKADYEKEYWQGILDATGKATGAYH 187
BLAST of NO16G01210 vs. NCBI_GenBank
Match: OSX77273.1 (hypothetical protein BU14_0153s0016 [Porphyra umbilicalis]) HSP 1 Score: 196.8 bits (499), Expect = 6.200e-47 Identity = 95/183 (51.91%), Postives = 119/183 (65.03%), Query Frame = 0 Query: 14 TQAFVPQFARPSPRAGPLAAGPQASDGSIRVKSVKAKDEWVPLLKATDIAPGDIIPVESKGLQLLLVADYDGSVYCVANVCPHLGTPLDQGSLGDGTIVCPLHKSAFSLESGELVGDWCPFPPVLGPLVLGKLQPPRDLAVFQVRSRGSDIEALLNINLKADFESKYWAGLLDAQGKATGDYY 197 + AF A P+ +A L+ P + D WV LL +DI PG++ PV + G +LL DYDG VY +N+CPHLGTPL G +GDG + C HKS++ L++GEL G WCPFPPVLGPL LGKLQPP +LAVF VR IEALL+++ FES YW GLLD++GKATGDYY Sbjct: 27 SSAFGSAVAAPASQAARLSHAPMRME----------TDAWVQLLPTSDIEPGELKPVYTTGQNILLSCDYDGQVYASSNICPHLGTPLTDGEVGDGVLTCAQHKSSWDLKTGELSGTWCPFPPVLGPL-LGKLQPPSNLAVFPVRENSGYIEALLDVDAAKAFESNYWFGLLDSKGKATGDYY 198
BLAST of NO16G01210 vs. NCBI_GenBank
Match: OSX77277.1 (hypothetical protein BU14_0153s0020 [Porphyra umbilicalis]) HSP 1 Score: 196.8 bits (499), Expect = 6.200e-47 Identity = 95/183 (51.91%), Postives = 119/183 (65.03%), Query Frame = 0 Query: 14 TQAFVPQFARPSPRAGPLAAGPQASDGSIRVKSVKAKDEWVPLLKATDIAPGDIIPVESKGLQLLLVADYDGSVYCVANVCPHLGTPLDQGSLGDGTIVCPLHKSAFSLESGELVGDWCPFPPVLGPLVLGKLQPPRDLAVFQVRSRGSDIEALLNINLKADFESKYWAGLLDAQGKATGDYY 197 + AF A P+ +A L+ P + D WV LL +DI PG++ PV + G +LL DYDG VY +N+CPHLGTPL G +GDG + C HKS++ L++GEL G WCPFPPVLGPL LGKLQPP +LAVF VR IEALL+++ FES YW GLLD++GKATGDYY Sbjct: 27 SSAFGSAVAAPASQAARLSHAPMRME----------TDAWVQLLPTSDIEPGELKPVYTTGQNILLSCDYDGQVYASSNICPHLGTPLTDGEVGDGVLTCAQHKSSWDLKTGELSGTWCPFPPVLGPL-LGKLQPPSNLAVFPVRENSGYIEALLDVDAAKAFESNYWFGLLDSKGKATGDYY 198
BLAST of NO16G01210 vs. NCBI_GenBank
Match: XP_005703205.1 (ferredoxin component (biphenyl dioxygenase, Rieske iron-sulfur component related protein) [Galdieria sulphuraria] >EME26685.1 ferredoxin component (biphenyl dioxygenase, Rieske iron-sulfur component related protein) [Galdieria sulphuraria]) HSP 1 Score: 195.3 bits (495), Expect = 1.800e-46 Identity = 87/152 (57.24%), Postives = 111/152 (73.03%), Query Frame = 0 Query: 46 SVKAKDE-WVPLLKATDIAPGDIIPVESKGLQLLLVADYDGSVYCVANVCPHLGTPLDQGSLGDGTIVCPLHKSAFSLESGELVGDWCPFPPVLGPLVLGKLQPPRDLAVFQVRSRGSDIEALLNINLKADFESKYWAGLLDAQGKATGDYY 197 S+ K E WV L+K +I PGD+ P G LL+V DYDG VYC ANVCPHLGTPLDQG +G GT++C H++++ L G+L G WCP+PP+LGPL LGKL+ P+DL+VF VR IEAL++++ +FES YW G+LDAQGKATG YY Sbjct: 59 SISMKTEAWVKLVKTEEIKPGDLKPFFVAGQSLLVVCDYDGQVYCTANVCPHLGTPLDQGLIGSGTLICAQHRTSWRLSDGKLAGKWCPYPPILGPL-LGKLKVPQDLSVFPVREMNGFIEALIDLDAAKEFESNYWRGILDAQGKATGGYY 209
BLAST of NO16G01210 vs. NCBI_GenBank
Match: OSX76651.1 (hypothetical protein BU14_0183s0042 [Porphyra umbilicalis]) HSP 1 Score: 194.1 bits (492), Expect = 4.000e-46 Identity = 96/182 (52.75%), Postives = 121/182 (66.48%), Query Frame = 0 Query: 23 RPSPR-------AGPLAAGPQASDGSIRVKSVKAK-DEWVPLLKATDIAPGDIIPVESKGLQLLLVADYDGSVYCVANVCPHLGTPLDQGSLGDGTIVCPLHKSAFSLESGELVGDWCPFPPVLGPLVLGKLQPPRDLAVFQVRSRGSDIEALLNINLKADFESKYWAGLLDAQGKATGDYY 197 RPSP AG A P A+ R + K D WVPL++ + PG++ V + G +L+ D DG VY +N+CPHLGTPL GS+GDG + C HKS++ L++GEL G+WCPFPPVLGPL LGKLQ P LAVF VR + IEALL+++ A+FES YW GLLDAQGKA+GDYY Sbjct: 17 RPSPAICSRRVFAGTAVASPSAA----RAAPLTMKTDVWVPLVETAALEPGELKAVYTTGQSILVTCDIDGQVYASSNICPHLGTPLTDGSVGDGVLTCAQHKSSWDLKTGELAGEWCPFPPVLGPL-LGKLQAPSTLAVFPVREKSGTIEALLDMDAVAEFESDYWKGLLDAQGKASGDYY 193
BLAST of NO16G01210 vs. NCBI_GenBank
Match: CEM20302.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 181.8 bits (460), Expect = 2.100e-42 Identity = 91/203 (44.83%), Postives = 128/203 (63.05%), Query Frame = 0 Query: 8 LALCATTQAFVPQFARPSPRAGPLAAGP--------QASDGSIRVKSV-----KAKDEWVPLLKATDIAPGDIIPVESKGLQLLLVAD-YDGSVYCVANVCPHLGTPLDQGSLGDGTIVCPLHKSAFSLESGELVGDWCPFPPVLGPLVLGKLQPPRDLAVFQVRSRGSDIEALLNINLKADFESKYWAGLLDAQGKATGDYY 197 + L + A V F PSPR+ ++SD R+ ++ K EW +L+ +IAPGD++P+E GL+LLLVA+ DG++YCV N P LGTPL++G + DG ++CP +++AF L +GE+VG+WCPFPPV+G + GKL P R L F VR +G I+ +++ KA+FE KYW GLLDAQGKA G YY Sbjct: 34 IVLTVLSAAVVTGFVIPSPRSPSSGDASNLYTKRRRRSSDRLSRMDAIVGAQPAVKQEWKSVLEVDEIAPGDLMPIEVNGLKLLLVAEAKDGTIYCVGNASPPLGTPLEEGEVKDGKVICPNYRTAFDLSTGEVVGEWCPFPPVIG-FLTGKLSPQRPLNTFPVRQQGKMIQVQVDVMAKANFERKYWKGLLDAQGKADGGYY 235 The following BLAST results are available for this feature:
BLAST of NO16G01210 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G01210 ID=NO16G01210|Name=NO16G01210|organism=Nannochloropsis oceanica|type=gene|length=1008bpback to top protein sequence of NO16G01210.1 >NO16G01210.1-protein ID=NO16G01210.1-protein|Name=NO16G01210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=197bpback to top Synonyms
Publications
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