NO16G01200, NO16G01200 (gene) Nannochloropsis oceanica

Overview
NameNO16G01200
Unique NameNO16G01200
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2178
Alignment locationchr16:373577..375754 -

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Properties
Property NameValue
DescriptionRibonuclease
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:373577..375754 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0004523RNA-DNA hybrid ribonuclease activity
GO:0004518nuclease activity
GO:0003723RNA binding
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
IPR001352RNase_HII/HIII
IPR024567RNase_HII/HIII_dom
Homology
BLAST of NO16G01200 vs. NCBI_GenBank
Match: EWM24019.1 (ribonuclease h2 subunit a [Nannochloropsis gaditana])

HSP 1 Score: 540.4 bits (1391), Expect = 4.100e-150
Identity = 262/312 (83.97%), Postives = 282/312 (90.38%), Query Frame = 0
Query:   45 AKGFPKNRFSHGVTKLWHIPPSLKTGKPVKLGIDEAGRGPVMGPMVYAAAFWKVEEDAAMIAMGFDDSKALDEKTRDGLFQRMLRTHAHLGWVIHSIPAAELAGKMLMKEPTSLNKISHDSAADMISLVLAEGVCVTEVFVDTVGDPEMYQKKLEGLFAHHSPRITFVVAKKADSLYKTVSAASIAAKVTRDRAISGWVWEEGFQGKGQVPLTNFGSGYPGDARCSEWLKGNSDSVFGFPSLVRFSWSTARDLMEKECVKVEWEEDEEDGGGLPAGTASIEAFIRPKPGAPKKARKRAKYFQTRGMETVGDF 357
            AKGFPKNRF HG+ KLWHIPP+LKTG+PVKLGIDEAGRGPV+GPMVYAAAFWKVEED AMIAMGFDDSKALDEKTRDGLFQRMLRTH  +GWVIHSIPA E+AGKMLM+EPTSLNKISHDSAADM+SLVLAEGVCVTEVFVDTVGDP+ YQ+KLEGLF HH+P I F VAKKADSLYKTVSAASIAAKVTRDRAI  WVWEE F    Q   T+FGSGYPGDARC+EWL+ NS+ VFGFPSLVRFSWST R+LMEKECV VEWEE+EE+ GGLPAGTASIEAF++PK   PKKARKRAKYFQ RGMETVGDF
Sbjct:   40 AKGFPKNRFKHGINKLWHIPPALKTGQPVKLGIDEAGRGPVLGPMVYAAAFWKVEEDDAMIAMGFDDSKALDEKTRDGLFQRMLRTHEQVGWVIHSIPATEVAGKMLMREPTSLNKISHDSAADMLSLVLAEGVCVTEVFVDTVGDPDTYQRKLEGLFGHHTPAIAFTVAKKADSLYKTVSAASIAAKVTRDRAIRDWVWEEDFP---QALSTDFGSGYPGDARCAEWLRKNSNPVFGFPSLVRFSWSTTRELMEKECVGVEWEEEEEN-GGLPAGTASIEAFVKPKADGPKKARKRAKYFQQRGMETVGDF 347          
BLAST of NO16G01200 vs. NCBI_GenBank
Match: CBN77810.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 265.8 bits (678), Expect = 2.000e-67
Identity = 152/286 (53.15%), Postives = 184/286 (64.34%), Query Frame = 0
Query:   73 VKLGIDEAGRGPVMGPMVYAAAFWKVEEDAAMIAMGFDDSKALDEKTRDGLFQRMLRTHAHLGWVIHSIPAAELAGKMLMKEPTSLNKISHDSAADMISLVLAEGVCVTEVFVDTVGDPEMYQKKLEGLFAHHSPRITFVVAKKADSLYKTVSAASIAAKVTRDRAISGWVWEEGFQGKGQVPLTNFGSGYPGDARCSEWLKGNSDSVFGFPSLVRFSWSTARDLMEKECVK-VEWEEDEEDGGGLPAGTASIEAF-IRPKPGAPKKARKRAKYFQTRGMETVGDF 357
            V LGIDEAGRGPV+GPM Y AA+W   +D  M A GFDDSKAL    R  LF R+ RT   +GWV+  I A EL+ KM  K P SLN ISHD+AA++I  V A GV VT+V+VDTVGDP  YQ KLE  F      I FVVAKKADSLYKT SAASI AKVTRDR + GW W E      +     +GSGYPGD +C +WL+ N D VFGFP + RFSW T +++++    K V+WEE+ ++     AG  SI +F ++PK    KKA  RA  F  RG+E V  F
Sbjct:   50 VILGIDEAGRGPVLGPMTYGAAYWSCADDKEMSAKGFDDSKALTSDQRTSLFDRIDRT-PEVGWVLRLISARELSDKMCRKVPYSLNVISHDAAAELIRAVQARGVKVTQVYVDTVGDPAFYQSKLEKEF---GKGIKFVVAKKADSLYKTASAASIVAKVTRDRIVEGWQWSEPNLDFSED--RKYGSGYPGDEKCKKWLESNVDPVFGFPDICRFSWGTTKEILKGPTRKRVDWEEEPDEEA---AGMNSIASFMVQPK----KKA--RANLFVKRGLELVDTF 320          
BLAST of NO16G01200 vs. NCBI_GenBank
Match: ETL98023.1 (ribonuclease HII [Phytophthora parasitica])

HSP 1 Score: 261.9 bits (668), Expect = 2.800e-66
Identity = 146/294 (49.66%), Postives = 190/294 (64.63%), Query Frame = 0
Query:   64 PPSLKTGKPVKLGIDEAGRGPVMGPMVYAAAFWKVEEDAAMIAMGFDDSKALDEKTRDGLFQRMLRTHAHLGWVIHSIPAAELAGKMLMKEPTSLNKISHDSAADMISLVLAEGVCVTEVFVDTVGDPEMYQKKLEGLFAHHSPRITFVVAKKADSLYKTVSAASIAAKVTRDRAISGWVWEEGFQGKGQVPLTNFGSGYPGDARCSEWLKGNSDSVFGFPSLVRFSWSTARDLMEKECVKVEWEEDEE-DGGGLPAGTASIEAFIRPKPGAPKKARKRAKYFQTRGMETVGDF 357
            P S   G PV LGIDEAGRGPVMGPMVY AA+W V ++ AM A+GFDDSKAL  ++R  LF++M  T   LGW++  I AAE++ KM  ++ ++LN++S D+A  +I+ V  +G  V +VFVDTVGDP  YQ  L     H +  I F V KKADSL+K VSAASIAAKVTRDR I+ W+WE       ++P T+FGSGYP D +   WL  + D VF FP+++RFSW T    +EK  VKVEW  +++ +    P GT SI +F+  KP    K   RA +F  R M+ V DF
Sbjct:   19 PASCLNGVPVMLGIDEAGRGPVMGPMVYGAAYWPVADNDAMSALGFDDSKALSAESRAQLFEKMQSTEG-LGWIVRLISAAEISDKM-QRQTSNLNEMSRDAAIQLINEVQKKGAVVKKVFVDTVGDPRWYQTFLT---KHFNGTIEFRVEKKADSLFKVVSAASIAAKVTRDRVITDWIWESPAL---ELP-TDFGSGYPSDPKTKAWLAAHVDQVFVFPNIIRFSWGTVEPFIEK-AVKVEWPHEKDLEKANAPTGTQSITSFL-AKPVQKAKPATRAAFFTQRNMQDVTDF 301          
BLAST of NO16G01200 vs. NCBI_GenBank
Match: ETO80326.1 (ribonuclease HII [Phytophthora parasitica P1976] >ETP49269.1 ribonuclease HII [Phytophthora parasitica P10297])

HSP 1 Score: 260.4 bits (664), Expect = 8.300e-66
Identity = 146/294 (49.66%), Postives = 190/294 (64.63%), Query Frame = 0
Query:   64 PPSLKTGKPVKLGIDEAGRGPVMGPMVYAAAFWKVEEDAAMIAMGFDDSKALDEKTRDGLFQRMLRTHAHLGWVIHSIPAAELAGKMLMKEPTSLNKISHDSAADMISLVLAEGVCVTEVFVDTVGDPEMYQKKLEGLFAHHSPRITFVVAKKADSLYKTVSAASIAAKVTRDRAISGWVWEEGFQGKGQVPLTNFGSGYPGDARCSEWLKGNSDSVFGFPSLVRFSWSTARDLMEKECVKVEWEEDEE-DGGGLPAGTASIEAFIRPKPGAPKKARKRAKYFQTRGMETVGDF 357
            P S   G PV LGIDEAGRGPVMGPMVY AA+W V ++ AM A+GFDDSKAL  ++R  LF++M  T   LGW++  I AAE++ KM  ++ ++LN++S D+A  +I+ V  +G  V +VFVDTVGDP  YQ  L     H +  I F V KKADSL+K VSAASIAAKVTRDR I+ W+WE       ++P T+FGSGYP D +   WL  + D VF FP+++RFSW T    +EK  VKVEW  +++ +    P GT SI +F+  KP    K   RA +F  R M+ V DF
Sbjct:   19 PASCLNGVPVMLGIDEAGRGPVMGPMVYGAAYWPVADNDAMSALGFDDSKALSAESRAQLFEKMQSTEG-LGWIVRLISAAEISDKM-QRQTSNLNEMSRDAAIQLINEVQKKGAVVKKVFVDTVGDPRWYQTFLT---KHFNGTIEFRVEKKADSLFKVVSAASIAAKVTRDRVITDWMWESPAL---ELP-TDFGSGYPSDPKTKAWLATHVDQVFVFPNIIRFSWGTVEPFIEK-AVKVEWPHEKDLEKANAPTGTQSITSFL-AKPVQKAKPATRAAFFTQRNMQDVTDF 301          
BLAST of NO16G01200 vs. NCBI_GenBank
Match: XP_008902444.1 (ribonuclease HII [Phytophthora parasitica INRA-310] >ETI51571.1 ribonuclease HII [Phytophthora parasitica P1569] >ETK91459.1 ribonuclease HII [Phytophthora parasitica] >ETL44864.1 ribonuclease HII [Phytophthora parasitica] >ETM51197.1 ribonuclease HII [Phytophthora parasitica] >ETN12481.1 ribonuclease HII [Phytophthora parasitica INRA-310] >ETP21346.1 ribonuclease HII [Phytophthora parasitica CJ01A1])

HSP 1 Score: 259.2 bits (661), Expect = 1.800e-65
Identity = 146/294 (49.66%), Postives = 189/294 (64.29%), Query Frame = 0
Query:   64 PPSLKTGKPVKLGIDEAGRGPVMGPMVYAAAFWKVEEDAAMIAMGFDDSKALDEKTRDGLFQRMLRTHAHLGWVIHSIPAAELAGKMLMKEPTSLNKISHDSAADMISLVLAEGVCVTEVFVDTVGDPEMYQKKLEGLFAHHSPRITFVVAKKADSLYKTVSAASIAAKVTRDRAISGWVWEEGFQGKGQVPLTNFGSGYPGDARCSEWLKGNSDSVFGFPSLVRFSWSTARDLMEKECVKVEWEEDEE-DGGGLPAGTASIEAFIRPKPGAPKKARKRAKYFQTRGMETVGDF 357
            P S   G PV LGIDEAGRGPVMGPMVY AA+W V ++ AM A+GFDDSKAL  ++R  LF++M  T   LGW++  I AAE++ KM  ++ ++LN++S D+A  +I+ V  +G  V +VFVDTVGDP  YQ  L     H +  I F V KKADSL+K VSAASIAAKVTRDR I+ W+WE       ++P T+FGSGYP D +   WL  + D VF FP+++RFSW T    +EK  VKVEW   ++ +    P GT SI +F+  KP    K   RA +F  R M+ V DF
Sbjct:   19 PASCLNGVPVMLGIDEAGRGPVMGPMVYGAAYWPVADNDAMSALGFDDSKALSAESRAQLFEKMQSTEG-LGWIVRLISAAEISDKM-QRQTSNLNEMSRDAAIQLINEVQKKGAVVKKVFVDTVGDPRWYQTFLT---KHFNGTIEFRVEKKADSLFKVVSAASIAAKVTRDRVITDWMWESPAL---ELP-TDFGSGYPSDPKTKAWLATHVDQVFVFPNIIRFSWGTVEPFIEK-AVKVEWPHGKDLEKANAPTGTQSITSFL-AKPVQKAKPATRAAFFTQRNMQDVTDF 301          
BLAST of NO16G01200 vs. NCBI_GenBank
Match: KUF77981.1 (Ribonuclease [Phytophthora nicotianae] >KUF87737.1 Ribonuclease [Phytophthora nicotianae])

HSP 1 Score: 253.4 bits (646), Expect = 1.000e-63
Identity = 143/289 (49.48%), Postives = 186/289 (64.36%), Query Frame = 0
Query:   64 PPSLKTGKPVKLGIDEAGRGPVMGPMVYAAAFWKVEEDAAMIAMGFDDSKALDEKTRDGLFQRMLRTHAHLGWVIHSIPAAELAGKMLMKEPTSLNKISHDSAADMISLVLAEGVCVTEVFVDTVGDPEMYQKKLEGLFAHHSPRITFVVAKKADSLYKTVSAASIAAKVTRDRAISGWVWEEGFQGKGQVPLTNFGSGYPGDARCSEWLKGNSDSVFGFPSLVRFSWSTARDLMEKECVKVEWEEDEE-DGGGLPAGTASIEAFIRPKPGAPKKARKRAKYFQTRGME 352
            P S   G PV LGIDEAGRGPVMGPMVY AA+W V ++ AM A+GFDDSKAL  ++R  LF++M  T   LGW++  I AAE++ KM  ++ ++LN++S D+A  +I+ V  +G  V +VFVDTVGDP  YQ  L     H +  I F V KKADSL+K VSAASIAAKVTRDR I+ W+WE       ++P T+FGSGYP D +   WL  + D VF FP+++RFSW T    +EK  VKVEW   ++ +    P GT SI +F+  KP    K   RA +F  R M+
Sbjct:   18 PASCLNGVPVMLGIDEAGRGPVMGPMVYGAAYWPVADNDAMSALGFDDSKALSAESRAQLFEKMQSTEG-LGWIVRLISAAEISDKM-QRQTSNLNEMSRDAAIQLINEVQKKGAVVKKVFVDTVGDPRWYQTFLT---KHFNGTIEFRVEKKADSLFKVVSAASIAAKVTRDRVITDWMWESPAL---ELP-TDFGSGYPSDPKTKAWLATHVDQVFVFPNIIRFSWGTVEPFIEK-AVKVEWPHGKDLEKANAPTGTQSITSFL-AKPVQKAKPATRAAFFTQRNMQ 295          
BLAST of NO16G01200 vs. NCBI_GenBank
Match: GAY04758.1 (ribonuclease HII, partial [Pythium insidiosum])

HSP 1 Score: 253.4 bits (646), Expect = 1.000e-63
Identity = 150/317 (47.32%), Postives = 187/317 (58.99%), Query Frame = 0
Query:   49 PKNRFSHGVTKLWHIPPSLKTGKPVKLGIDEAGRGPVMGPMVYAAAFWKVEEDAAMIAMGFDDSKALDEKTRDGLFQRMLRTHAHLGWVIHSIPAAELAGKMLMKEPTSLNKISHDSAADMISLVLAEGVCVTEVFVDTVGDPEMYQKKLEGLFAHHSPRITFVVAKKADSLYKTVSAASIAAKVTRDRAISGWVWEEGFQGKGQVPLTNFGSGYPGDARCSEWLKGNSDSVFGFPSLVRFSWSTARDLMEKECVKVEW---EEDEEDGGGLPAGTASIEAFIRPK------PGAPKKARKRAKYFQTRGMETVGDF 357
            PK      V      P +   G PV LGIDEAGRGPVMGPMVY AA+W V+E+AAM A+GFDDSKAL  ++R+ LF +M + +  LGW++  I AAE++ KM  ++ ++LN+IS D+A  +I  V A+GV V +VFVDTVGDP+ Y+  L     H    I F VAKKADSL+K VSAASIAAKVTRDR IS W WE             FGSGYP D R   WL  + D VF FP++VRFSW T      K    V+W    E E+D    P GT +I +F + K       G    A  RA +F+   M  V DF
Sbjct:   12 PKMNLQRHVLLASDAPDNCLHGTPVMLGIDEAGRGPVMGPMVYGAAYWPVDENAAMSALGFDDSKALSIESREALFNKM-KENERLGWIVRLISAAEISDKM-QRQTSNLNEISRDAAIQLIKEVQAKGVNVKQVFVDTVGDPKWYENFLT---KHFHGTIEFRVAKKADSLFKVVSAASIAAKVTRDRVISDWEWET----PSLTLSKEFGSGYPSDPRTKAWLTESMDPVFAFPNIVRFSWGTIEPFFAK-ATAVDWPFMRELEKDDA--PVGTQAITSFFQTKASPASGKGDANAAVARADFFKEHHMHVVNDF 316          
BLAST of NO16G01200 vs. NCBI_GenBank
Match: GAX98830.1 (ribonuclease HII [Pythium insidiosum])

HSP 1 Score: 251.9 bits (642), Expect = 2.900e-63
Identity = 149/320 (46.56%), Postives = 187/320 (58.44%), Query Frame = 0
Query:   49 PKNRFSHGVTKLWHIPPSLKTGKPVKLGIDEAGRGPVMGPMVYAAAFWKVEEDAAMIAMGFDDSKALDEKTRDGLFQRMLRTHAHLGWVIHSIPAAELAGKMLMKEPTSLNKISHDSAADMISLVLAEGVCVTEVFVDTVGDPEMYQKKLEGLFAHHSPRITFVVAKKADSLYKTVSAASIAAKVTRDRAISGWVWEEGFQGKGQVPLTNFGSGYPGDARCSEWLKGNSDSVFGFPSLVRFSWSTARDLMEKECVKVEW------EEDEEDGGGLPAGTASIEAFIRPK------PGAPKKARKRAKYFQTRGMETVGDF 357
            PK      V      P +   G PV LGIDEAGRGPVMGPMVY AA+W V+E+AAM A+GFDDSKAL  ++R+ LF +M + +  LGW++  I AAE++ KM  ++ ++LN+IS D+A  +I  V A+GV V +VFVDTVGDP+ Y+  L     H    I F VAKKADSL+K VSAASIAAKVTRDR IS W WE             FGSGYP D R   WL  + D VF FP++VRFSW T      K    V+W      E+D+      P GT +I +F + K       G    A  RA +F+   M  V DF
Sbjct:    7 PKMNLQRHVLLASDAPDNCLHGTPVMLGIDEAGRGPVMGPMVYGAAYWPVDENAAMSALGFDDSKALSIESREALFNKM-KENERLGWIVRLISAAEISDKM-QRQTSNLNEISRDAAIQLIKEVQAKGVNVKQVFVDTVGDPKWYENFLT---KHFHGTIEFRVAKKADSLFKVVSAASIAAKVTRDRVISDWEWET----PSLTLSKEFGSGYPSDPRTKAWLTESMDPVFAFPNIVRFSWGTIEPFFAK-ATXVDWPFMRXLEKDD-----APVGTQAITSFFQTKASPASGKGDAXAAVARADFFKEXXMHVVNDF 311          
BLAST of NO16G01200 vs. NCBI_GenBank
Match: XP_008610172.1 (hypothetical protein SDRG_06186 [Saprolegnia diclina VS20] >EQC36751.1 hypothetical protein SDRG_06186 [Saprolegnia diclina VS20])

HSP 1 Score: 251.1 bits (640), Expect = 5.000e-63
Identity = 142/293 (48.46%), Postives = 184/293 (62.80%), Query Frame = 0
Query:   63 IPPSLKTGKPVKLGIDEAGRGPVMGPMVYAAAFWKVEEDAAMIAMGFDDSKALDEKTRDGLFQRMLRTHAHLGWVIHSIPAAELAGKMLMKEPTSLNKISHDSAADMISLVLAEGVCVTEVFVDTVGDPEMYQKKLEGLFAHHSPRITFVVAKKADSLYKTVSAASIAAKVTRDRAISGWVWEEGFQGKGQVPLTNFGSGYPGDARCSEWLKGNSDSVFGFPSLVRFSWSTARDLMEKECVKVEWEEDEEDGGGLPAGTASIEAFIRPKPGAPKKARKRAKYFQTRGMETVGD 356
            +P S   G  V LGIDEAGRGP++GPMVY AA+W V  D  M AMGFDDSKAL  + R  LF ++  T   +G+V  SIPAAE+A  ML +   +LN++S D+A +MI  V   GV +T V+VDTVGDP  YQ  L   F   +  ITF V KKADSLYK VSAASIAAKVTRD  +S W WE       ++P+ ++GSGYP D +  +WL  + + VFG+P++VRFSW T    +++    VEW  D+ED    PAGT SI++F++     P K RKR  YF    +E   +
Sbjct:    8 VPASCLDGAEVMLGIDEAGRGPILGPMVYGAAYWPVALDGVMRAMGFDDSKALSHEARTQLFAKIKATD-DVGYVTRSIPAAEIAHNMLTRR-RNLNEMSRDAAIEMILAVQRAGVRLTHVYVDTVGDPGWYQSFLTKRF---NGSITFTVEKKADSLYKVVSAASIAAKVTRDAEVSEWAWE---HASLKLPV-DYGSGYPSDPKTKQWLAAHVERVFGYPNIVRFSWGTLESYLDR-MAAVEWPHDKEDA---PAGTQSIKSFMQ----TPTKKRKRTPYFVHNHLEVASE 283          
BLAST of NO16G01200 vs. NCBI_GenBank
Match: XP_012204727.1 (hypothetical protein SPRG_10192 [Saprolegnia parasitica CBS 223.65] >KDO24659.1 hypothetical protein SPRG_10192 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 246.9 bits (629), Expect = 9.500e-62
Identity = 140/289 (48.44%), Postives = 183/289 (63.32%), Query Frame = 0
Query:   63 IPPSLKTGKPVKLGIDEAGRGPVMGPMVYAAAFWKVEEDAAMIAMGFDDSKALDEKTRDGLFQRMLRTHAHLGWVIHSIPAAELAGKMLMKEPTSLNKISHDSAADMISLVLAEGVCVTEVFVDTVGDPEMYQKKLEGLFAHHSPRITFVVAKKADSLYKTVSAASIAAKVTRDRAISGWVWEEGFQGKGQVPLTNFGSGYPGDARCSEWLKGNSDSVFGFPSLVRFSWSTARDLMEKECVKVEWEEDEEDGGGLPAGTASIEAFIRPKPGAPKKARKRAKYFQTRGME 352
            +P S   G  V LGIDEAGRGP++GPMVY AA+W V  D+ M AMGFDDSKAL   +R  LF ++  T A +G+V  SI AAE++  ML +   +LN++S D+A +MI  V   GV +T V+VDTVGDP  YQ  L   F      ITF V KKADSLYK VSAASIAAKVTRD  +S W WE       ++P+ ++GSGYP D +  +WL  + + VFG+P+++RFSW T    +++    VEW  D+ED    PAGT SI++F++     P K RKR  YF    +E
Sbjct:    8 VPASCLDGADVMLGIDEAGRGPILGPMVYGAAYWPVSLDSTMRAMGFDDSKALSHDSRTQLFAKIKAT-ADVGYVTRSISAAEISHNMLTRR-RNLNEMSRDAAIEMILAVQKAGVRLTHVYVDTVGDPGWYQSFLTKRF---GGAITFTVEKKADSLYKVVSAASIAAKVTRDAEVSEWTWE---HASLKLPI-DYGSGYPSDPKTKQWLAAHVERVFGYPNILRFSWGTLESYLDR-MAAVEWPHDKEDA---PAGTQSIKSFMQ----TPTKKRKRTPYFVQNHLE 279          
The following BLAST results are available for this feature:
BLAST of NO16G01200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24019.14.100e-15083.97ribonuclease h2 subunit a [Nannochloropsis gaditan... [more]
CBN77810.12.000e-6753.15conserved unknown protein [Ectocarpus siliculosus][more]
ETL98023.12.800e-6649.66ribonuclease HII [Phytophthora parasitica][more]
ETO80326.18.300e-6649.66ribonuclease HII [Phytophthora parasitica P1976] >... [more]
XP_008902444.11.800e-6549.66ribonuclease HII [Phytophthora parasitica INRA-310... [more]
KUF77981.11.000e-6349.48Ribonuclease [Phytophthora nicotianae] >KUF87737.1... [more]
GAY04758.11.000e-6347.32ribonuclease HII, partial [Pythium insidiosum][more]
GAX98830.12.900e-6346.56ribonuclease HII [Pythium insidiosum][more]
XP_008610172.15.000e-6348.46hypothetical protein SDRG_06186 [Saprolegnia dicli... [more]
XP_012204727.19.500e-6248.44hypothetical protein SPRG_10192 [Saprolegnia paras... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL150nonsL150Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003107NSK003107Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G01200.1NO16G01200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593443gene_6002Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100040g36gene6463Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G01200.1NO16G01200.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G01200 ID=NO16G01200|Name=NO16G01200|organism=Nannochloropsis oceanica|type=gene|length=2178bp
TTCATGGTTATGTGTGTGACTGTGTTGTGTGGTGCGCGGTTGTGTGCTGG
TAAGCATGTGAGTCGAAGCAGCCAAACAGCAAATCAAAGAGCCCAGACAG
GAGCAGCAGCCTAAGCGAGGATCCTGGGGCAACCACGCGGCATCAAGTTC
TGGAACAACATCCACCGTACACATGGAGGGATGGGACTTCAAAGATGAGA
TACGTGAATAAATACAGAGACCAGAGATGAGGCGTGAGGCAAGGCCCCTT
TATTCAATTAATTAGGACCTGGTCCTCAAGAAGCGACAGCACAGAAGCAA
GCCAAATGGCTCGCCACCCACGGTGCCTTTCCTCCCCGTGTGCAAGTCAG
AGACACGCCCCAAGACCCTCTCTCACTCCCTTCTACATATCAAGTCCACA
TGTGCACATTTTGATCCCCTTCACGTGCCCAAACAACCCTGATCACCGGC
TGAAAAGCCCACGAAAAGCGGTAGTTGAGTGTATCTTGAGCTTTCGTGAG
GGCAAGTGCGGACTCGAGTGATCATCATTGTTTTTTCTGTGTTTTCCGGA
ATCCAAAGCCGAAAGCCTCAACCCAGGCAAAATTACGGCCTGGCACATGG
CGCGAAAGGCCATCGACAAGCATCGCCCACTTTTTCCTTTCTGCGTGCAC
ACGCGCGGTCACGGCTTCGGTGTGGGTGGTCATGGTATTTGTTCAATAAG
GTTCCCTCCATGATTTTCAAGCCTCTCCAGCCACTCAATTTGAATTTCTT
CTTCGACCATCGGTTCCGGGCTCTTCTCAGGTGAGAACTCACCCCTCTCT
CAACACCAACACAGGGTGGCTTCTTATCCACCATGGCGGCCGACAGCGAC
GAGAACGAGGCCCCATGCAGCACCATTACCCCCAGCAGCACCAGTTGCTC
AAATGATGAAAACAATCCTCCCCCAGCCCTGACCCTCGCGCAGCAGCAAC
AGGCCGACGACGACGCCAAGGGCTTCCCCAAGAATCGCTTCTCGCACGGC
GTCACCAAGCTCTGGCACATCCCACCTTCCCTCAAGACGGGCAAGCCCGT
CAAGCTGGGCATTGATGAGGCAGGCCGTGGTCCTGTCATGGGACCGATGG
TGTATGCGGCGGCATTTTGGAAGGTGGAAGAGgtatgtcttaataatagg
gaggaggggaggttgagggaagacctgtgcatcaaatgaaacaaacgacg
aaagaagaatgcctgtgtctgtggttgggaatgaaggatattggatttaa
atgtttgagagggcgagaaacggtattttacctcccaacgccttgatttc
ctccctatcctgcagGACGCCGCCATGATTGCCATGGGCTTCGACGACTC
CAAGGCTCTGGACGAAAAAACCCGTGACGGGCTATTTCAACGCATGCTGC
GGACGCATGCTCATCTTGGGTGGGTTATCCATTCCATTCCTGCCGCAGAA
TTGGCAGGCAAGATGTTAATGAAAGAGCCGACGAGCTTGAATAAAATAAG
TCACGATTCCGCAGCAGACATGATTTCTCTCGTGTTGGCGGAAGGTGTGT
GTGTGACGGAGGTATTTGTGGACACAGTGGGCGACCCAGAGATGTACCAG
AAGAAGTTGGAAGGACTGTTTGCGCACCATTCCCCTCGTATCACGTTTGT
GGTGGCGAAGAAAGCCGATAGCTTGTACAAGACCGTGAGCGCGGCCTCGA
TTGCTGCCAAGGTGACGAGGGACAGGGCCATCAGTGGGTGGGTGTGGGAG
GAGGGCTTTCAAGGCAAAGGTCAAGTGCCGTTGACGAACTTCGGGAGCGG
CTACCCGGGGGACGCCCGTTGCTCGGAATGGCTGAAAGGCAACAGTGACA
GCGTGTTTGGCTTTCCTAGCCTGGTGCGCTTCAGCTGGTCCACGGCCCGG
GATCTGATGGAGAAGGAGTGCGTAAAGGTAGAGTGGGAGGAGGACGAGGA
GGATGGGGGGGGGCTACCAGCGGGGACGGCGTCGATTGAGGCGTTTATTC
GACCCAAGCCGGGGGCACCCAAAAAGGCACGGAAGAGAGCCAAGTATTTT
CAAACGCGGGGCATGGAGACAGTGGGGGACTTCTAATCAGCTATCACAGG
ATAGGAGGTCGATGATGATAATGATAACAATAGAGCTATCAGATACTGGA
GCAGATGCATGGGGCAAAACTGGTGTGT
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protein sequence of NO16G01200.1

>NO16G01200.1-protein ID=NO16G01200.1-protein|Name=NO16G01200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=357bp
MAADSDENEAPCSTITPSSTSCSNDENNPPPALTLAQQQQADDDAKGFPK
NRFSHGVTKLWHIPPSLKTGKPVKLGIDEAGRGPVMGPMVYAAAFWKVEE
DAAMIAMGFDDSKALDEKTRDGLFQRMLRTHAHLGWVIHSIPAAELAGKM
LMKEPTSLNKISHDSAADMISLVLAEGVCVTEVFVDTVGDPEMYQKKLEG
LFAHHSPRITFVVAKKADSLYKTVSAASIAAKVTRDRAISGWVWEEGFQG
KGQVPLTNFGSGYPGDARCSEWLKGNSDSVFGFPSLVRFSWSTARDLMEK
ECVKVEWEEDEEDGGGLPAGTASIEAFIRPKPGAPKKARKRAKYFQTRGM
ETVGDF*
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Synonyms
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