NO16G01200, NO16G01200 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G01200 vs. NCBI_GenBank
Match: EWM24019.1 (ribonuclease h2 subunit a [Nannochloropsis gaditana]) HSP 1 Score: 540.4 bits (1391), Expect = 4.100e-150 Identity = 262/312 (83.97%), Postives = 282/312 (90.38%), Query Frame = 0
Query: 45 AKGFPKNRFSHGVTKLWHIPPSLKTGKPVKLGIDEAGRGPVMGPMVYAAAFWKVEEDAAMIAMGFDDSKALDEKTRDGLFQRMLRTHAHLGWVIHSIPAAELAGKMLMKEPTSLNKISHDSAADMISLVLAEGVCVTEVFVDTVGDPEMYQKKLEGLFAHHSPRITFVVAKKADSLYKTVSAASIAAKVTRDRAISGWVWEEGFQGKGQVPLTNFGSGYPGDARCSEWLKGNSDSVFGFPSLVRFSWSTARDLMEKECVKVEWEEDEEDGGGLPAGTASIEAFIRPKPGAPKKARKRAKYFQTRGMETVGDF 357
AKGFPKNRF HG+ KLWHIPP+LKTG+PVKLGIDEAGRGPV+GPMVYAAAFWKVEED AMIAMGFDDSKALDEKTRDGLFQRMLRTH +GWVIHSIPA E+AGKMLM+EPTSLNKISHDSAADM+SLVLAEGVCVTEVFVDTVGDP+ YQ+KLEGLF HH+P I F VAKKADSLYKTVSAASIAAKVTRDRAI WVWEE F Q T+FGSGYPGDARC+EWL+ NS+ VFGFPSLVRFSWST R+LMEKECV VEWEE+EE+ GGLPAGTASIEAF++PK PKKARKRAKYFQ RGMETVGDF
Sbjct: 40 AKGFPKNRFKHGINKLWHIPPALKTGQPVKLGIDEAGRGPVLGPMVYAAAFWKVEEDDAMIAMGFDDSKALDEKTRDGLFQRMLRTHEQVGWVIHSIPATEVAGKMLMREPTSLNKISHDSAADMLSLVLAEGVCVTEVFVDTVGDPDTYQRKLEGLFGHHTPAIAFTVAKKADSLYKTVSAASIAAKVTRDRAIRDWVWEEDFP---QALSTDFGSGYPGDARCAEWLRKNSNPVFGFPSLVRFSWSTTRELMEKECVGVEWEEEEEN-GGLPAGTASIEAFVKPKADGPKKARKRAKYFQQRGMETVGDF 347
BLAST of NO16G01200 vs. NCBI_GenBank
Match: CBN77810.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 265.8 bits (678), Expect = 2.000e-67 Identity = 152/286 (53.15%), Postives = 184/286 (64.34%), Query Frame = 0
Query: 73 VKLGIDEAGRGPVMGPMVYAAAFWKVEEDAAMIAMGFDDSKALDEKTRDGLFQRMLRTHAHLGWVIHSIPAAELAGKMLMKEPTSLNKISHDSAADMISLVLAEGVCVTEVFVDTVGDPEMYQKKLEGLFAHHSPRITFVVAKKADSLYKTVSAASIAAKVTRDRAISGWVWEEGFQGKGQVPLTNFGSGYPGDARCSEWLKGNSDSVFGFPSLVRFSWSTARDLMEKECVK-VEWEEDEEDGGGLPAGTASIEAF-IRPKPGAPKKARKRAKYFQTRGMETVGDF 357
V LGIDEAGRGPV+GPM Y AA+W +D M A GFDDSKAL R LF R+ RT +GWV+ I A EL+ KM K P SLN ISHD+AA++I V A GV VT+V+VDTVGDP YQ KLE F I FVVAKKADSLYKT SAASI AKVTRDR + GW W E + +GSGYPGD +C +WL+ N D VFGFP + RFSW T +++++ K V+WEE+ ++ AG SI +F ++PK KKA RA F RG+E V F
Sbjct: 50 VILGIDEAGRGPVLGPMTYGAAYWSCADDKEMSAKGFDDSKALTSDQRTSLFDRIDRT-PEVGWVLRLISARELSDKMCRKVPYSLNVISHDAAAELIRAVQARGVKVTQVYVDTVGDPAFYQSKLEKEF---GKGIKFVVAKKADSLYKTASAASIVAKVTRDRIVEGWQWSEPNLDFSED--RKYGSGYPGDEKCKKWLESNVDPVFGFPDICRFSWGTTKEILKGPTRKRVDWEEEPDEEA---AGMNSIASFMVQPK----KKA--RANLFVKRGLELVDTF 320
BLAST of NO16G01200 vs. NCBI_GenBank
Match: ETL98023.1 (ribonuclease HII [Phytophthora parasitica]) HSP 1 Score: 261.9 bits (668), Expect = 2.800e-66 Identity = 146/294 (49.66%), Postives = 190/294 (64.63%), Query Frame = 0
Query: 64 PPSLKTGKPVKLGIDEAGRGPVMGPMVYAAAFWKVEEDAAMIAMGFDDSKALDEKTRDGLFQRMLRTHAHLGWVIHSIPAAELAGKMLMKEPTSLNKISHDSAADMISLVLAEGVCVTEVFVDTVGDPEMYQKKLEGLFAHHSPRITFVVAKKADSLYKTVSAASIAAKVTRDRAISGWVWEEGFQGKGQVPLTNFGSGYPGDARCSEWLKGNSDSVFGFPSLVRFSWSTARDLMEKECVKVEWEEDEE-DGGGLPAGTASIEAFIRPKPGAPKKARKRAKYFQTRGMETVGDF 357
P S G PV LGIDEAGRGPVMGPMVY AA+W V ++ AM A+GFDDSKAL ++R LF++M T LGW++ I AAE++ KM ++ ++LN++S D+A +I+ V +G V +VFVDTVGDP YQ L H + I F V KKADSL+K VSAASIAAKVTRDR I+ W+WE ++P T+FGSGYP D + WL + D VF FP+++RFSW T +EK VKVEW +++ + P GT SI +F+ KP K RA +F R M+ V DF
Sbjct: 19 PASCLNGVPVMLGIDEAGRGPVMGPMVYGAAYWPVADNDAMSALGFDDSKALSAESRAQLFEKMQSTEG-LGWIVRLISAAEISDKM-QRQTSNLNEMSRDAAIQLINEVQKKGAVVKKVFVDTVGDPRWYQTFLT---KHFNGTIEFRVEKKADSLFKVVSAASIAAKVTRDRVITDWIWESPAL---ELP-TDFGSGYPSDPKTKAWLAAHVDQVFVFPNIIRFSWGTVEPFIEK-AVKVEWPHEKDLEKANAPTGTQSITSFL-AKPVQKAKPATRAAFFTQRNMQDVTDF 301
BLAST of NO16G01200 vs. NCBI_GenBank
Match: ETO80326.1 (ribonuclease HII [Phytophthora parasitica P1976] >ETP49269.1 ribonuclease HII [Phytophthora parasitica P10297]) HSP 1 Score: 260.4 bits (664), Expect = 8.300e-66 Identity = 146/294 (49.66%), Postives = 190/294 (64.63%), Query Frame = 0
Query: 64 PPSLKTGKPVKLGIDEAGRGPVMGPMVYAAAFWKVEEDAAMIAMGFDDSKALDEKTRDGLFQRMLRTHAHLGWVIHSIPAAELAGKMLMKEPTSLNKISHDSAADMISLVLAEGVCVTEVFVDTVGDPEMYQKKLEGLFAHHSPRITFVVAKKADSLYKTVSAASIAAKVTRDRAISGWVWEEGFQGKGQVPLTNFGSGYPGDARCSEWLKGNSDSVFGFPSLVRFSWSTARDLMEKECVKVEWEEDEE-DGGGLPAGTASIEAFIRPKPGAPKKARKRAKYFQTRGMETVGDF 357
P S G PV LGIDEAGRGPVMGPMVY AA+W V ++ AM A+GFDDSKAL ++R LF++M T LGW++ I AAE++ KM ++ ++LN++S D+A +I+ V +G V +VFVDTVGDP YQ L H + I F V KKADSL+K VSAASIAAKVTRDR I+ W+WE ++P T+FGSGYP D + WL + D VF FP+++RFSW T +EK VKVEW +++ + P GT SI +F+ KP K RA +F R M+ V DF
Sbjct: 19 PASCLNGVPVMLGIDEAGRGPVMGPMVYGAAYWPVADNDAMSALGFDDSKALSAESRAQLFEKMQSTEG-LGWIVRLISAAEISDKM-QRQTSNLNEMSRDAAIQLINEVQKKGAVVKKVFVDTVGDPRWYQTFLT---KHFNGTIEFRVEKKADSLFKVVSAASIAAKVTRDRVITDWMWESPAL---ELP-TDFGSGYPSDPKTKAWLATHVDQVFVFPNIIRFSWGTVEPFIEK-AVKVEWPHEKDLEKANAPTGTQSITSFL-AKPVQKAKPATRAAFFTQRNMQDVTDF 301
BLAST of NO16G01200 vs. NCBI_GenBank
Match: XP_008902444.1 (ribonuclease HII [Phytophthora parasitica INRA-310] >ETI51571.1 ribonuclease HII [Phytophthora parasitica P1569] >ETK91459.1 ribonuclease HII [Phytophthora parasitica] >ETL44864.1 ribonuclease HII [Phytophthora parasitica] >ETM51197.1 ribonuclease HII [Phytophthora parasitica] >ETN12481.1 ribonuclease HII [Phytophthora parasitica INRA-310] >ETP21346.1 ribonuclease HII [Phytophthora parasitica CJ01A1]) HSP 1 Score: 259.2 bits (661), Expect = 1.800e-65 Identity = 146/294 (49.66%), Postives = 189/294 (64.29%), Query Frame = 0
Query: 64 PPSLKTGKPVKLGIDEAGRGPVMGPMVYAAAFWKVEEDAAMIAMGFDDSKALDEKTRDGLFQRMLRTHAHLGWVIHSIPAAELAGKMLMKEPTSLNKISHDSAADMISLVLAEGVCVTEVFVDTVGDPEMYQKKLEGLFAHHSPRITFVVAKKADSLYKTVSAASIAAKVTRDRAISGWVWEEGFQGKGQVPLTNFGSGYPGDARCSEWLKGNSDSVFGFPSLVRFSWSTARDLMEKECVKVEWEEDEE-DGGGLPAGTASIEAFIRPKPGAPKKARKRAKYFQTRGMETVGDF 357
P S G PV LGIDEAGRGPVMGPMVY AA+W V ++ AM A+GFDDSKAL ++R LF++M T LGW++ I AAE++ KM ++ ++LN++S D+A +I+ V +G V +VFVDTVGDP YQ L H + I F V KKADSL+K VSAASIAAKVTRDR I+ W+WE ++P T+FGSGYP D + WL + D VF FP+++RFSW T +EK VKVEW ++ + P GT SI +F+ KP K RA +F R M+ V DF
Sbjct: 19 PASCLNGVPVMLGIDEAGRGPVMGPMVYGAAYWPVADNDAMSALGFDDSKALSAESRAQLFEKMQSTEG-LGWIVRLISAAEISDKM-QRQTSNLNEMSRDAAIQLINEVQKKGAVVKKVFVDTVGDPRWYQTFLT---KHFNGTIEFRVEKKADSLFKVVSAASIAAKVTRDRVITDWMWESPAL---ELP-TDFGSGYPSDPKTKAWLATHVDQVFVFPNIIRFSWGTVEPFIEK-AVKVEWPHGKDLEKANAPTGTQSITSFL-AKPVQKAKPATRAAFFTQRNMQDVTDF 301
BLAST of NO16G01200 vs. NCBI_GenBank
Match: KUF77981.1 (Ribonuclease [Phytophthora nicotianae] >KUF87737.1 Ribonuclease [Phytophthora nicotianae]) HSP 1 Score: 253.4 bits (646), Expect = 1.000e-63 Identity = 143/289 (49.48%), Postives = 186/289 (64.36%), Query Frame = 0
Query: 64 PPSLKTGKPVKLGIDEAGRGPVMGPMVYAAAFWKVEEDAAMIAMGFDDSKALDEKTRDGLFQRMLRTHAHLGWVIHSIPAAELAGKMLMKEPTSLNKISHDSAADMISLVLAEGVCVTEVFVDTVGDPEMYQKKLEGLFAHHSPRITFVVAKKADSLYKTVSAASIAAKVTRDRAISGWVWEEGFQGKGQVPLTNFGSGYPGDARCSEWLKGNSDSVFGFPSLVRFSWSTARDLMEKECVKVEWEEDEE-DGGGLPAGTASIEAFIRPKPGAPKKARKRAKYFQTRGME 352
P S G PV LGIDEAGRGPVMGPMVY AA+W V ++ AM A+GFDDSKAL ++R LF++M T LGW++ I AAE++ KM ++ ++LN++S D+A +I+ V +G V +VFVDTVGDP YQ L H + I F V KKADSL+K VSAASIAAKVTRDR I+ W+WE ++P T+FGSGYP D + WL + D VF FP+++RFSW T +EK VKVEW ++ + P GT SI +F+ KP K RA +F R M+
Sbjct: 18 PASCLNGVPVMLGIDEAGRGPVMGPMVYGAAYWPVADNDAMSALGFDDSKALSAESRAQLFEKMQSTEG-LGWIVRLISAAEISDKM-QRQTSNLNEMSRDAAIQLINEVQKKGAVVKKVFVDTVGDPRWYQTFLT---KHFNGTIEFRVEKKADSLFKVVSAASIAAKVTRDRVITDWMWESPAL---ELP-TDFGSGYPSDPKTKAWLATHVDQVFVFPNIIRFSWGTVEPFIEK-AVKVEWPHGKDLEKANAPTGTQSITSFL-AKPVQKAKPATRAAFFTQRNMQ 295
BLAST of NO16G01200 vs. NCBI_GenBank
Match: GAY04758.1 (ribonuclease HII, partial [Pythium insidiosum]) HSP 1 Score: 253.4 bits (646), Expect = 1.000e-63 Identity = 150/317 (47.32%), Postives = 187/317 (58.99%), Query Frame = 0
Query: 49 PKNRFSHGVTKLWHIPPSLKTGKPVKLGIDEAGRGPVMGPMVYAAAFWKVEEDAAMIAMGFDDSKALDEKTRDGLFQRMLRTHAHLGWVIHSIPAAELAGKMLMKEPTSLNKISHDSAADMISLVLAEGVCVTEVFVDTVGDPEMYQKKLEGLFAHHSPRITFVVAKKADSLYKTVSAASIAAKVTRDRAISGWVWEEGFQGKGQVPLTNFGSGYPGDARCSEWLKGNSDSVFGFPSLVRFSWSTARDLMEKECVKVEW---EEDEEDGGGLPAGTASIEAFIRPK------PGAPKKARKRAKYFQTRGMETVGDF 357
PK V P + G PV LGIDEAGRGPVMGPMVY AA+W V+E+AAM A+GFDDSKAL ++R+ LF +M + + LGW++ I AAE++ KM ++ ++LN+IS D+A +I V A+GV V +VFVDTVGDP+ Y+ L H I F VAKKADSL+K VSAASIAAKVTRDR IS W WE FGSGYP D R WL + D VF FP++VRFSW T K V+W E E+D P GT +I +F + K G A RA +F+ M V DF
Sbjct: 12 PKMNLQRHVLLASDAPDNCLHGTPVMLGIDEAGRGPVMGPMVYGAAYWPVDENAAMSALGFDDSKALSIESREALFNKM-KENERLGWIVRLISAAEISDKM-QRQTSNLNEISRDAAIQLIKEVQAKGVNVKQVFVDTVGDPKWYENFLT---KHFHGTIEFRVAKKADSLFKVVSAASIAAKVTRDRVISDWEWET----PSLTLSKEFGSGYPSDPRTKAWLTESMDPVFAFPNIVRFSWGTIEPFFAK-ATAVDWPFMRELEKDDA--PVGTQAITSFFQTKASPASGKGDANAAVARADFFKEHHMHVVNDF 316
BLAST of NO16G01200 vs. NCBI_GenBank
Match: GAX98830.1 (ribonuclease HII [Pythium insidiosum]) HSP 1 Score: 251.9 bits (642), Expect = 2.900e-63 Identity = 149/320 (46.56%), Postives = 187/320 (58.44%), Query Frame = 0
Query: 49 PKNRFSHGVTKLWHIPPSLKTGKPVKLGIDEAGRGPVMGPMVYAAAFWKVEEDAAMIAMGFDDSKALDEKTRDGLFQRMLRTHAHLGWVIHSIPAAELAGKMLMKEPTSLNKISHDSAADMISLVLAEGVCVTEVFVDTVGDPEMYQKKLEGLFAHHSPRITFVVAKKADSLYKTVSAASIAAKVTRDRAISGWVWEEGFQGKGQVPLTNFGSGYPGDARCSEWLKGNSDSVFGFPSLVRFSWSTARDLMEKECVKVEW------EEDEEDGGGLPAGTASIEAFIRPK------PGAPKKARKRAKYFQTRGMETVGDF 357
PK V P + G PV LGIDEAGRGPVMGPMVY AA+W V+E+AAM A+GFDDSKAL ++R+ LF +M + + LGW++ I AAE++ KM ++ ++LN+IS D+A +I V A+GV V +VFVDTVGDP+ Y+ L H I F VAKKADSL+K VSAASIAAKVTRDR IS W WE FGSGYP D R WL + D VF FP++VRFSW T K V+W E+D+ P GT +I +F + K G A RA +F+ M V DF
Sbjct: 7 PKMNLQRHVLLASDAPDNCLHGTPVMLGIDEAGRGPVMGPMVYGAAYWPVDENAAMSALGFDDSKALSIESREALFNKM-KENERLGWIVRLISAAEISDKM-QRQTSNLNEISRDAAIQLIKEVQAKGVNVKQVFVDTVGDPKWYENFLT---KHFHGTIEFRVAKKADSLFKVVSAASIAAKVTRDRVISDWEWET----PSLTLSKEFGSGYPSDPRTKAWLTESMDPVFAFPNIVRFSWGTIEPFFAK-ATXVDWPFMRXLEKDD-----APVGTQAITSFFQTKASPASGKGDAXAAVARADFFKEXXMHVVNDF 311
BLAST of NO16G01200 vs. NCBI_GenBank
Match: XP_008610172.1 (hypothetical protein SDRG_06186 [Saprolegnia diclina VS20] >EQC36751.1 hypothetical protein SDRG_06186 [Saprolegnia diclina VS20]) HSP 1 Score: 251.1 bits (640), Expect = 5.000e-63 Identity = 142/293 (48.46%), Postives = 184/293 (62.80%), Query Frame = 0
Query: 63 IPPSLKTGKPVKLGIDEAGRGPVMGPMVYAAAFWKVEEDAAMIAMGFDDSKALDEKTRDGLFQRMLRTHAHLGWVIHSIPAAELAGKMLMKEPTSLNKISHDSAADMISLVLAEGVCVTEVFVDTVGDPEMYQKKLEGLFAHHSPRITFVVAKKADSLYKTVSAASIAAKVTRDRAISGWVWEEGFQGKGQVPLTNFGSGYPGDARCSEWLKGNSDSVFGFPSLVRFSWSTARDLMEKECVKVEWEEDEEDGGGLPAGTASIEAFIRPKPGAPKKARKRAKYFQTRGMETVGD 356
+P S G V LGIDEAGRGP++GPMVY AA+W V D M AMGFDDSKAL + R LF ++ T +G+V SIPAAE+A ML + +LN++S D+A +MI V GV +T V+VDTVGDP YQ L F + ITF V KKADSLYK VSAASIAAKVTRD +S W WE ++P+ ++GSGYP D + +WL + + VFG+P++VRFSW T +++ VEW D+ED PAGT SI++F++ P K RKR YF +E +
Sbjct: 8 VPASCLDGAEVMLGIDEAGRGPILGPMVYGAAYWPVALDGVMRAMGFDDSKALSHEARTQLFAKIKATD-DVGYVTRSIPAAEIAHNMLTRR-RNLNEMSRDAAIEMILAVQRAGVRLTHVYVDTVGDPGWYQSFLTKRF---NGSITFTVEKKADSLYKVVSAASIAAKVTRDAEVSEWAWE---HASLKLPV-DYGSGYPSDPKTKQWLAAHVERVFGYPNIVRFSWGTLESYLDR-MAAVEWPHDKEDA---PAGTQSIKSFMQ----TPTKKRKRTPYFVHNHLEVASE 283
BLAST of NO16G01200 vs. NCBI_GenBank
Match: XP_012204727.1 (hypothetical protein SPRG_10192 [Saprolegnia parasitica CBS 223.65] >KDO24659.1 hypothetical protein SPRG_10192 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 246.9 bits (629), Expect = 9.500e-62 Identity = 140/289 (48.44%), Postives = 183/289 (63.32%), Query Frame = 0
Query: 63 IPPSLKTGKPVKLGIDEAGRGPVMGPMVYAAAFWKVEEDAAMIAMGFDDSKALDEKTRDGLFQRMLRTHAHLGWVIHSIPAAELAGKMLMKEPTSLNKISHDSAADMISLVLAEGVCVTEVFVDTVGDPEMYQKKLEGLFAHHSPRITFVVAKKADSLYKTVSAASIAAKVTRDRAISGWVWEEGFQGKGQVPLTNFGSGYPGDARCSEWLKGNSDSVFGFPSLVRFSWSTARDLMEKECVKVEWEEDEEDGGGLPAGTASIEAFIRPKPGAPKKARKRAKYFQTRGME 352
+P S G V LGIDEAGRGP++GPMVY AA+W V D+ M AMGFDDSKAL +R LF ++ T A +G+V SI AAE++ ML + +LN++S D+A +MI V GV +T V+VDTVGDP YQ L F ITF V KKADSLYK VSAASIAAKVTRD +S W WE ++P+ ++GSGYP D + +WL + + VFG+P+++RFSW T +++ VEW D+ED PAGT SI++F++ P K RKR YF +E
Sbjct: 8 VPASCLDGADVMLGIDEAGRGPILGPMVYGAAYWPVSLDSTMRAMGFDDSKALSHDSRTQLFAKIKAT-ADVGYVTRSISAAEISHNMLTRR-RNLNEMSRDAAIEMILAVQKAGVRLTHVYVDTVGDPGWYQSFLTKRF---GGAITFTVEKKADSLYKVVSAASIAAKVTRDAEVSEWTWE---HASLKLPI-DYGSGYPSDPKTKQWLAAHVERVFGYPNILRFSWGTLESYLDR-MAAVEWPHDKEDA---PAGTQSIKSFMQ----TPTKKRKRTPYFVQNHLE 279 The following BLAST results are available for this feature:
BLAST of NO16G01200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G01200 ID=NO16G01200|Name=NO16G01200|organism=Nannochloropsis oceanica|type=gene|length=2178bpback to top protein sequence of NO16G01200.1 >NO16G01200.1-protein ID=NO16G01200.1-protein|Name=NO16G01200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=357bpback to top Synonyms
Publications
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