NO16G00930, NO16G00930 (gene) Nannochloropsis oceanica

Overview
NameNO16G00930
Unique NameNO16G00930
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1891
Alignment locationchr16:303042..304932 +

Link to JBrowse

Properties
Property NameValue
DescriptionRuvB-like helicase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:303042..304932 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0097255R2TP complex
GO:0035267NuA4 histone acetyltransferase complex
GO:0031011Ino80 complex
GO:0005654nucleoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0043141ATP-dependent 5'-3' DNA helicase activity
GO:0003678DNA helicase activity
GO:0005524ATP binding
GO:0016787hydrolase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR027238RuvB-like
IPR037942RUVBL2
IPR010339TIP49_C
IPR003593AAA+_ATPase
Vocabulary: Biological Process
TermDefinition
GO:0016043cellular component organization
Homology
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BLAST of NO16G00930 vs. NCBI_GenBank
Match: XP_005854093.1 (hypothetical protein NGA_0496400 [Nannochloropsis gaditana CCMP526] >EKU22260.1 hypothetical protein NGA_0496400 [Nannochloropsis gaditana CCMP526] >EWM24030.1 ruvb-like 2 [Nannochloropsis gaditana])

HSP 1 Score: 836.3 bits (2159), Expect = 4.900e-239
Identity = 433/452 (95.80%), Postives = 443/452 (98.01%), Query Frame = 0 
Query:    1 MADLGLGKETSKDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQAGARRAAGVVYKMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDTAAGAGGKTGRITLCTTEMETVYDLGAKMIEALQKEKVAAGDVITIDKASGKISKLGRSFSRSRDYDAMGPQTRFVQCPEGELQKRKEMVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDQKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIIGTSPYAEAEVRKILQIRCEEEDVEMSEDALELLTKIGMEASLRYAIHMIIAASLVAQKRKAGSVDVQDIKKVYSLFVDVKRSTQFLVEYQQEFMFNEL 453
            MADLGLGKET+KDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQ GARRAAG+VYKMIKEGKIAGRAILLAGQPGTGKTA+AMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDT AG G KTGRITLCTTEMETVYDLGAKMIEALQKEKV+AGDVITIDKASGKISKLGRSF+RSRDYDAMGPQTRFVQCPEGELQKRKE VHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQID KVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMII T+PYAEAEVR+ILQIRCEEEDVEMS+DALELLTKIGMEASLRYAIHMI+AASLVA KRKAG VDVQDIK+VYSLFVDVKRSTQFLVEYQQEFMFNEL
Sbjct:    1 MADLGLGKETTKDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQTGARRAAGIVYKMIKEGKIAGRAILLAGQPGTGKTAVAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDTPAGGGAKTGRITLCTTEMETVYDLGAKMIEALQKEKVSAGDVITIDKASGKISKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKETVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDMKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIISTTPYAEAEVRRILQIRCEEEDVEMSDDALELLTKIGMEASLRYAIHMIMAASLVAHKRKAGEVDVQDIKRVYSLFVDVKRSTQFLVEYQQEFMFNEL 452
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BLAST of NO16G00930 vs. NCBI_GenBank
Match: CBN79493.1 (RuvB-like 2 [Ectocarpus siliculosus])

HSP 1 Score: 751.9 bits (1940), Expect = 1.200e-213
Identity = 383/451 (84.92%), Postives = 418/451 (92.68%), Query Frame = 0 
Query:    2 ADLGLGKETSKDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQAGARRAAGVVYKMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDTAAGAGGKTGRITLCTTEMETVYDLGAKMIEALQKEKVAAGDVITIDKASGKISKLGRSFSRSRDYDAMGPQTRFVQCPEGELQKRKEMVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDQKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIIGTSPYAEAEVRKILQIRCEEEDVEMSEDALELLTKIGMEASLRYAIHMIIAASLVAQKRKAGSVDVQDIKKVYSLFVDVKRSTQFLVEYQQEFMFNEL 453
            AD+ LG    +DLTRIERIGAHSHIRGLGLDD+LEPR+VSQG+VGQ  ARRA GV+YKMI+EG+IAGRAILLAG+PGTGKTAIAMGLAQALG  TPFTTIAGSEIFSLEMSKTEA+TQAFRRSIGV+IMEETEIIEGEVVE+QVDT  G G KTGR+TLCTTEMETVYDLGAKMIEALQKEKV AGDV+TIDKASGKI+KLGRSF+RSRDYDAMGPQTRFVQCPEGELQKRKE+VHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQID KVAEWREEGKAT+VPGVLFIDEVHMLDIECFSWLNRALES LAPVLI+ATNRG+A+IRGT YKSPHGIPIDLLDRLMI+ T  Y+E EV+KIL IRCEEEDVEM +DA+ LLTKI ME SLRYAIHMI+AA LV+ KRK   V+++DIKKVYSLFVD+KRSTQFL+EYQ++FMFN L
Sbjct:    4 ADVSLGNTEVRDLTRIERIGAHSHIRGLGLDDSLEPRDVSQGLVGQHAARRATGVIYKMIQEGQIAGRAILLAGKPGTGKTAIAMGLAQALGPDTPFTTIAGSEIFSLEMSKTEALTQAFRRSIGVKIMEETEIIEGEVVEIQVDTPVGGGDKTGRVTLCTTEMETVYDLGAKMIEALQKEKVGAGDVMTIDKASGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDLKVAEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESHLAPVLIIATNRGIAKIRGTNYKSPHGIPIDLLDRLMIVSTVAYSEQEVKKILSIRCEEEDVEMDDDAIILLTKIAMETSLRYAIHMIMAAQLVSTKRKGTQVEIEDIKKVYSLFVDIKRSTQFLMEYQKDFMFNTL 454
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BLAST of NO16G00930 vs. NCBI_GenBank
Match: GAX92784.1 (ruvBlike 2 putative [Pythium insidiosum])

HSP 1 Score: 734.6 bits (1895), Expect = 2.000e-208
Identity = 378/443 (85.33%), Postives = 409/443 (92.33%), Query Frame = 0 
Query:   12 KDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQAGARRAAGVVYKMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDT-AAGAGGKTGRITLCTTEMETVYDLGAKMIEALQKEKVAAGDVITIDKASGKISKLGRSFSRSRDYDAMGPQTRFVQCPEGELQKRKEMVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDQKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIIGTSPYAEAEVRKILQIRCEEEDVEMSEDALELLTKIGMEASLRYAIHMIIAASLVAQKRKAGSVDVQDIKKVYSLFVDVKRSTQFLVEYQQEFMFNELE 454
            KD+TRIERIGAHSHIRGLGLDD+LEPR VSQGMVGQ  AR+AAG+VYKMI+EG IAGRAILLAGQPGTGKTAIAM +AQALGE TPFTTIAGSE+FSLEMSKTEA+TQAFRRSIGVRIMEETEIIEGEVVE+QVDT   G G K GR+TL TTEMETVYDLGAKMI+AL KEKV AGDVITI+K +GKI+KLGRSF+RSRDYDAMGPQTRFVQCPEGELQKRKE+VHVVSLHEIDVINSR QGFLALFAGDTGEIK EVREQIDQKVAEWREEGKAT+VPGVLFIDEVHMLDIECFSWLNRALESD+APVLI+ATNRG+ +IRGT YKSPHGIPIDLLDRLMII T PY E E+RKIL IRCEEEDVEM+EDA +LLT+I +E SLRYAIHMIIAASLV  KRK   VDV DIK+VYSLFVDVKRSTQFL+EYQ+EFMFNE++
Sbjct:   12 KDITRIERIGAHSHIRGLGLDDSLEPRAVSQGMVGQEDARKAAGIVYKMIEEGNIAGRAILLAGQPGTGKTAIAMAIAQALGEDTPFTTIAGSEVFSLEMSKTEALTQAFRRSIGVRIMEETEIIEGEVVEIQVDTPTGGVGDKVGRLTLRTTEMETVYDLGAKMIDALTKEKVEAGDVITINKETGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRSQGFLALFAGDTGEIKDEVREQIDQKVAEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDMAPVLIIATNRGITRIRGTNYKSPHGIPIDLLDRLMIIPTKPYTETEMRKILTIRCEEEDVEMTEDAKDLLTRIAVETSLRYAIHMIIAASLVCAKRKGTEVDVADIKRVYSLFVDVKRSTQFLMEYQREFMFNEID 454
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BLAST of NO16G00930 vs. NCBI_GenBank
Match: XP_009831220.1 (RuvB-like 2 [Aphanomyces astaci] >ETV79379.1 RuvB-like 2 [Aphanomyces astaci])

HSP 1 Score: 729.9 bits (1883), Expect = 4.900e-207
Identity = 375/443 (84.65%), Postives = 408/443 (92.10%), Query Frame = 0 
Query:   12 KDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQAGARRAAGVVYKMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDT-AAGAGGKTGRITLCTTEMETVYDLGAKMIEALQKEKVAAGDVITIDKASGKISKLGRSFSRSRDYDAMGPQTRFVQCPEGELQKRKEMVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDQKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIIGTSPYAEAEVRKILQIRCEEEDVEMSEDALELLTKIGMEASLRYAIHMIIAASLVAQKRKAGSVDVQDIKKVYSLFVDVKRSTQFLVEYQQEFMFNELE 454
            +D+TRIERIGAHSHIRGLGLDDALEPR VSQGMVGQ  AR+AAG+V +MI+EGKIAGRAILLAG+PGTGKTAIAMG+AQALGE TPFTTIAGSE+FSLEMSKTEA+TQAFRRSIGVRIMEETEIIEGEVVE+QVDT   GAG K GR+TL TTEMETVYDLGAKMI+ L KEK+ AGDVITI+K SGKISKLGRSF+RS+DYDAMGPQTRFVQCPEGELQKRKE+VHVVSLHEIDVINSR QGFLALFAGDTGEIK EVREQID KV+EWREEGKAT+VPGVLFIDEVHMLDIECFSWLNRALESDLAPVLI+ATNRG+ +IRGT YKSPHGIPIDLLDRLMII T PY E++VRKIL IRCEEEDVEMS+DA +LLT+I ME SLRYAIH+I+ ASLV  KRK   V+V DIKKVYSLFVDVKRSTQFL+EYQ EFMFNE+E
Sbjct:   10 RDITRIERIGAHSHIRGLGLDDALEPRNVSQGMVGQTDARKAAGIVLRMIEEGKIAGRAILLAGKPGTGKTAIAMGIAQALGEDTPFTTIAGSEVFSLEMSKTEALTQAFRRSIGVRIMEETEIIEGEVVEIQVDTPTGGAGDKIGRLTLRTTEMETVYDLGAKMIDQLTKEKIEAGDVITINKESGKISKLGRSFTRSKDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRSQGFLALFAGDTGEIKDEVREQIDTKVSEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRGITRIRGTNYKSPHGIPIDLLDRLMIISTKPYTESDVRKILNIRCEEEDVEMSDDAKDLLTRIAMETSLRYAIHVIMTASLVCTKRKGTEVEVVDIKKVYSLFVDVKRSTQFLMEYQHEFMFNEIE 452
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BLAST of NO16G00930 vs. NCBI_GenBank
Match: XP_008871232.1 (RuvB-like 2 [Aphanomyces invadans] >ETW00207.1 RuvB-like 2 [Aphanomyces invadans])

HSP 1 Score: 729.9 bits (1883), Expect = 4.900e-207
Identity = 374/443 (84.42%), Postives = 409/443 (92.33%), Query Frame = 0 
Query:   12 KDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQAGARRAAGVVYKMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDT-AAGAGGKTGRITLCTTEMETVYDLGAKMIEALQKEKVAAGDVITIDKASGKISKLGRSFSRSRDYDAMGPQTRFVQCPEGELQKRKEMVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDQKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIIGTSPYAEAEVRKILQIRCEEEDVEMSEDALELLTKIGMEASLRYAIHMIIAASLVAQKRKAGSVDVQDIKKVYSLFVDVKRSTQFLVEYQQEFMFNELE 454
            +D+TRIERIGAHSHIRGLGLDDALEPR VSQGMVGQ  AR+AAG+V +MI+EGKIAGRAILLAG+PGTGKTAIAMG+AQALGE TPFTTIAGSE+FSLEMSKTEA+TQAFRRSIGVRIMEETEIIEGEVVE+QVDT   GAG K GR+TL TTEMETVYDLGAKMI+ L KEK+ AGDVITI+K SGKISKLGRSF+RS+DYDAMGPQTRFVQCPEGELQKRKE+VHVVSLHEIDVINSR QGFLALFAGDTGEIK EVREQID KV+EWREEGKAT+VPGVLFIDEVHMLDIECFSWLNRALESDLAPVLI+ATNRG+ +IRGT YKSPHGIPIDLLDRLMII T PY+E++VRKIL IRCEEEDVEM++DA +LLT+I ME SLRYAIH+I+ ASLV  KRK   VDV DIKKVYSLFVDVKRSTQFL+EYQ EFMFNE++
Sbjct:   29 RDITRIERIGAHSHIRGLGLDDALEPRNVSQGMVGQTDARKAAGIVLRMIEEGKIAGRAILLAGKPGTGKTAIAMGIAQALGEDTPFTTIAGSEVFSLEMSKTEALTQAFRRSIGVRIMEETEIIEGEVVEIQVDTPTGGAGDKIGRLTLRTTEMETVYDLGAKMIDQLTKEKIEAGDVITINKESGKISKLGRSFTRSKDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRSQGFLALFAGDTGEIKDEVREQIDTKVSEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRGITRIRGTNYKSPHGIPIDLLDRLMIISTKPYSESDVRKILNIRCEEEDVEMTDDAKDLLTRIAMETSLRYAIHVIMTASLVCTKRKGTEVDVADIKKVYSLFVDVKRSTQFLMEYQHEFMFNEID 471
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BLAST of NO16G00930 vs. NCBI_GenBank
Match: XP_008608948.1 (RuvB-like 2 [Saprolegnia diclina VS20] >EQC37428.1 RuvB-like 2 [Saprolegnia diclina VS20])

HSP 1 Score: 725.7 bits (1872), Expect = 9.300e-206
Identity = 372/442 (84.16%), Postives = 406/442 (91.86%), Query Frame = 0 
Query:   12 KDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQAGARRAAGVVYKMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDTAAGA-GGKTGRITLCTTEMETVYDLGAKMIEALQKEKVAAGDVITIDKASGKISKLGRSFSRSRDYDAMGPQTRFVQCPEGELQKRKEMVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDQKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIIGTSPYAEAEVRKILQIRCEEEDVEMSEDALELLTKIGMEASLRYAIHMIIAASLVAQKRKAGSVDVQDIKKVYSLFVDVKRSTQFLVEYQQEFMFNEL 453
            +D+TRIERIGAHSHIRGLGLDDALEPR VSQGMVGQ  AR+AAG+V +MI+EGKIAGRAILLAG+PGTGKTAIAMG+AQALGE TPFTTIAGSE+FSLEMSKTEA+TQAFRRSIG+RIMEETEIIEGEVVE+QVDT  G+ G K GR+TL TTEMETVYDLG KMI+ L KEK+ AGDVITI+K SGKISKLGRSF+RS+DYDAMGPQTRFVQCPEGELQKRKE+VHVVSLHEIDVINSR QGFLALFAGDTGEIK EVREQID KV EWREEGKAT+VPGVLFIDEVHMLDIECFSWLNRALESDLAPVLI+ATNRG+ +IRGT YKSPHGIPIDLLDRLMII T PY+EA+VRKIL IRCEEEDVEM++DA +LLT+I ME SLRYAIH+I+ ASLV  KRK   VDV DIKKVYSLFVDVKRSTQFL+EYQ EFMFNE+
Sbjct:   10 RDITRIERIGAHSHIRGLGLDDALEPRNVSQGMVGQTEARKAAGIVLRMIEEGKIAGRAILLAGKPGTGKTAIAMGIAQALGEDTPFTTIAGSEVFSLEMSKTEALTQAFRRSIGIRIMEETEIIEGEVVEIQVDTPTGSVGDKVGRLTLRTTEMETVYDLGTKMIDQLTKEKIEAGDVITINKESGKISKLGRSFTRSKDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRSQGFLALFAGDTGEIKDEVREQIDTKVNEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRGITRIRGTNYKSPHGIPIDLLDRLMIISTKPYSEADVRKILNIRCEEEDVEMTDDAKDLLTRIAMETSLRYAIHIIMTASLVCTKRKGTEVDVADIKKVYSLFVDVKRSTQFLMEYQHEFMFNEI 451
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BLAST of NO16G00930 vs. NCBI_GenBank
Match: OQR97185.1 (hypothetical protein ACHHYP_12609 [Achlya hypogyna])

HSP 1 Score: 725.7 bits (1872), Expect = 9.300e-206
Identity = 373/442 (84.39%), Postives = 406/442 (91.86%), Query Frame = 0 
Query:   12 KDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQAGARRAAGVVYKMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDTAAGA-GGKTGRITLCTTEMETVYDLGAKMIEALQKEKVAAGDVITIDKASGKISKLGRSFSRSRDYDAMGPQTRFVQCPEGELQKRKEMVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDQKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIIGTSPYAEAEVRKILQIRCEEEDVEMSEDALELLTKIGMEASLRYAIHMIIAASLVAQKRKAGSVDVQDIKKVYSLFVDVKRSTQFLVEYQQEFMFNEL 453
            +D+TRIERIGAHSHIRGLGLDDALEPR VSQGMVGQ  AR+AAG+V +MI+EGKIAGRAILLAG+PGTGKTAIAMG+AQALGE TPFTTIAGSE+FSLEMSKTEA+TQAFRRSIG+RIMEETEIIEGEVVE+QVDT  G+ G K GR+TL TTEMETVYDLG KMI+ L KEK+ AGDVITI+K SGKISKLGRSF+RS+DYDAMGP TRFVQCPEGELQKRKE+VHVVSLHEIDVINSR QGFLALFAGDTGEIK EVREQID KV EWREEGKAT+VPGVLFIDEVHMLDIECFSWLNRALESDLAPVLI+ATNRG+ +IRGT YKSPHGIPIDLLDRLMII T PY+EAEVRKIL IRCEEEDVEM++DA +LLT+I ME SLRYAIH+I+ ASLVA KRK   VDV DIKKVYSLFVDVKRSTQFL+EYQ EFMFNE+
Sbjct:   10 RDITRIERIGAHSHIRGLGLDDALEPRNVSQGMVGQTEARKAAGIVLRMIEEGKIAGRAILLAGKPGTGKTAIAMGIAQALGEDTPFTTIAGSEVFSLEMSKTEALTQAFRRSIGIRIMEETEIIEGEVVEIQVDTPTGSVGEKVGRLTLRTTEMETVYDLGTKMIDQLTKEKIEAGDVITINKESGKISKLGRSFTRSKDYDAMGPSTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRSQGFLALFAGDTGEIKDEVREQIDTKVNEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRGITRIRGTNYKSPHGIPIDLLDRLMIISTKPYSEAEVRKILNIRCEEEDVEMTDDAKDLLTRIAMETSLRYAIHIIMTASLVATKRKGTEVDVADIKKVYSLFVDVKRSTQFLMEYQHEFMFNEV 451
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BLAST of NO16G00930 vs. NCBI_GenBank
Match: CCA25957.1 (ruvBlike 2 putative [Albugo laibachii Nc14])

HSP 1 Score: 720.3 bits (1858), Expect = 3.900e-204
Identity = 371/443 (83.75%), Postives = 405/443 (91.42%), Query Frame = 0 
Query:   12 KDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQAGARRAAGVVYKMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDT-AAGAGGKTGRITLCTTEMETVYDLGAKMIEALQKEKVAAGDVITIDKASGKISKLGRSFSRSRDYDAMGPQTRFVQCPEGELQKRKEMVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDQKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIIGTSPYAEAEVRKILQIRCEEEDVEMSEDALELLTKIGMEASLRYAIHMIIAASLVAQKRKAGSVDVQDIKKVYSLFVDVKRSTQFLVEYQQEFMFNELE 454
            KD+TRIERIG HSHIRGLGLDD+LEPR VSQGMVGQ  AR+AAG+V KMI+EG IAGRAILLAG+PGTGKTAIAM +A ALGE TPFTTIAGSE+FSLEMSKTEA+TQAFRRSIGVRIMEETEIIEGEVVE+QVDT   G G K GR+TL TTEMETVYDLGAKMI+AL KEKV AGDV+TI K +GKI+KLGRSF+RSRDYDAMGPQTRFVQCPEGELQKRKE+VHVVSLHEIDVINSR QGFLALFAGDTGEIK EVREQIDQKVAEWREEGKAT+VPGVLFIDEVHMLDIECFSWLNRALESD+APVLI+ATNRG+ +IRGT YKSPHGIPIDLLDRLMII T  Y+E E+RKIL IRCEEEDVEMSEDA +LLT+I +E SLRYAIHMIIA+SLV  KRK   VDV DIK+VYSLFVD+KRSTQFL+EYQ+EFMFNE++
Sbjct:  182 KDITRIERIGTHSHIRGLGLDDSLEPRGVSQGMVGQKDARKAAGIVAKMIEEGNIAGRAILLAGRPGTGKTAIAMAIAHALGEDTPFTTIAGSEVFSLEMSKTEALTQAFRRSIGVRIMEETEIIEGEVVEIQVDTPTGGTGDKIGRLTLRTTEMETVYDLGAKMIDALTKEKVEAGDVVTISKETGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRSQGFLALFAGDTGEIKDEVREQIDQKVAEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDMAPVLIIATNRGITRIRGTNYKSPHGIPIDLLDRLMIIPTQSYSEDEMRKILTIRCEEEDVEMSEDAKDLLTRIAVETSLRYAIHMIIASSLVCAKRKGTEVDVSDIKRVYSLFVDLKRSTQFLMEYQREFMFNEID 624
[Close]
BLAST of NO16G00930 vs. NCBI_GenBank
Match: XP_008905370.1 (RuvB-like 2 [Phytophthora parasitica INRA-310] >ETI47185.1 RuvB-like 2 [Phytophthora parasitica P1569] >ETL93697.1 RuvB-like 2 [Phytophthora parasitica] >ETM46935.1 RuvB-like 2 [Phytophthora parasitica] >ETN09537.1 RuvB-like 2 [Phytophthora parasitica INRA-310])

HSP 1 Score: 719.9 bits (1857), Expect = 5.100e-204
Identity = 371/443 (83.75%), Postives = 406/443 (91.65%), Query Frame = 0 
Query:   12 KDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQAGARRAAGVVYKMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDT-AAGAGGKTGRITLCTTEMETVYDLGAKMIEALQKEKVAAGDVITIDKASGKISKLGRSFSRSRDYDAMGPQTRFVQCPEGELQKRKEMVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDQKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIIGTSPYAEAEVRKILQIRCEEEDVEMSEDALELLTKIGMEASLRYAIHMIIAASLVAQKRKAGSVDVQDIKKVYSLFVDVKRSTQFLVEYQQEFMFNELE 454
            KD+TRIERIGAHSHIRGLGLDD+LEPR  SQGMVGQ  AR+AAG+V KMI+EG IAGRAILLAG+PGTGKTAIAMG+AQALGE TPFTTIAGSE+FSLEMSKTEA+TQAFRRSIGVRIMEETEIIEGEVVE+QVDT   G G K GR+TL TTEMETVYDLGAKMI++L KEKV AGDVITI+K SGKISKLGRSF+RSRDYDAMG QTRFVQCPEGELQKRKE+VHVVSLHEIDVINSR QGFLALFAGDTGEIK EVREQID KVAEWREEGKAT+VPGVLFIDEVHMLDIECFSWLNRALESD+APVLI+ATNRG+ +IRGT YKSPHGIPIDLLDRLMII T PY+E+E+RKIL IRCEEEDVEM+E+A +LLT+I +E SLRYAIHMII ASLV  KRK   VDV DIK+VYSLF DVKRSTQFL+EYQ+EFMF+E++
Sbjct:   12 KDITRIERIGAHSHIRGLGLDDSLEPRASSQGMVGQTEARKAAGIVAKMIEEGNIAGRAILLAGKPGTGKTAIAMGIAQALGEDTPFTTIAGSEVFSLEMSKTEALTQAFRRSIGVRIMEETEIIEGEVVEIQVDTPTGGVGDKVGRLTLRTTEMETVYDLGAKMIDSLTKEKVEAGDVITINKESGKISKLGRSFTRSRDYDAMGAQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRSQGFLALFAGDTGEIKDEVREQIDTKVAEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDMAPVLIIATNRGITRIRGTNYKSPHGIPIDLLDRLMIIPTKPYSESEMRKILTIRCEEEDVEMTEEAKDLLTRIAVETSLRYAIHMIITASLVCSKRKGTEVDVPDIKRVYSLFADVKRSTQFLMEYQREFMFHEMD 454
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BLAST of NO16G00930 vs. NCBI_GenBank
Match: ETK87138.1 (RuvB-like 2 [Phytophthora parasitica] >ETL40533.1 RuvB-like 2 [Phytophthora parasitica])

HSP 1 Score: 719.9 bits (1857), Expect = 5.100e-204
Identity = 371/443 (83.75%), Postives = 406/443 (91.65%), Query Frame = 0 
Query:   12 KDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQAGARRAAGVVYKMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGEGTPFTTIAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDT-AAGAGGKTGRITLCTTEMETVYDLGAKMIEALQKEKVAAGDVITIDKASGKISKLGRSFSRSRDYDAMGPQTRFVQCPEGELQKRKEMVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDQKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIIGTSPYAEAEVRKILQIRCEEEDVEMSEDALELLTKIGMEASLRYAIHMIIAASLVAQKRKAGSVDVQDIKKVYSLFVDVKRSTQFLVEYQQEFMFNELE 454
            KD+TRIERIGAHSHIRGLGLDD+LEPR  SQGMVGQ  AR+AAG+V KMI+EG IAGRAILLAG+PGTGKTAIAMG+AQALGE TPFTTIAGSE+FSLEMSKTEA+TQAFRRSIGVRIMEETEIIEGEVVE+QVDT   G G K GR+TL TTEMETVYDLGAKMI++L KEKV AGDVITI+K SGKISKLGRSF+RSRDYDAMG QTRFVQCPEGELQKRKE+VHVVSLHEIDVINSR QGFLALFAGDTGEIK EVREQID KVAEWREEGKAT+VPGVLFIDEVHMLDIECFSWLNRALESD+APVLI+ATNRG+ +IRGT YKSPHGIPIDLLDRLMII T PY+E+E+RKIL IRCEEEDVEM+E+A +LLT+I +E SLRYAIHMII ASLV  KRK   VDV DIK+VYSLF DVKRSTQFL+EYQ+EFMF+E++
Sbjct:   38 KDITRIERIGAHSHIRGLGLDDSLEPRASSQGMVGQTEARKAAGIVAKMIEEGNIAGRAILLAGKPGTGKTAIAMGIAQALGEDTPFTTIAGSEVFSLEMSKTEALTQAFRRSIGVRIMEETEIIEGEVVEIQVDTPTGGVGDKVGRLTLRTTEMETVYDLGAKMIDSLTKEKVEAGDVITINKESGKISKLGRSFTRSRDYDAMGAQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRSQGFLALFAGDTGEIKDEVREQIDTKVAEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDMAPVLIIATNRGITRIRGTNYKSPHGIPIDLLDRLMIIPTKPYSESEMRKILTIRCEEEDVEMTEEAKDLLTRIAVETSLRYAIHMIITASLVCSKRKGTEVDVPDIKRVYSLFADVKRSTQFLMEYQREFMFHEMD 480
The following BLAST results are available for this feature:
BLAST of NO16G00930 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854093.14.900e-23995.80hypothetical protein NGA_0496400 [Nannochloropsis ... [more]
CBN79493.11.200e-21384.92RuvB-like 2 [Ectocarpus siliculosus][more]
GAX92784.12.000e-20885.33ruvBlike 2 putative [Pythium insidiosum][more]
XP_009831220.14.900e-20784.65RuvB-like 2 [Aphanomyces astaci] >ETV79379.1 RuvB-... [more]
XP_008871232.14.900e-20784.42RuvB-like 2 [Aphanomyces invadans] >ETW00207.1 Ruv... [more]
XP_008608948.19.300e-20684.16RuvB-like 2 [Saprolegnia diclina VS20] >EQC37428.1... [more]
OQR97185.19.300e-20684.39hypothetical protein ACHHYP_12609 [Achlya hypogyna... [more]
CCA25957.13.900e-20483.75ruvBlike 2 putative [Albugo laibachii Nc14][more]
XP_008905370.15.100e-20483.75RuvB-like 2 [Phytophthora parasitica INRA-310] >ET... [more]
ETK87138.15.100e-20483.75RuvB-like 2 [Phytophthora parasitica] >ETL40533.1 ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL150nonsL150Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003080NSK003080Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G00930.1NO16G00930.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|556771gene_5968Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G00930.1NO16G00930.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G00930 ID=NO16G00930|Name=NO16G00930|organism=Nannochloropsis oceanica|type=gene|length=1891bp
ATGGCAGACCTGGGTCTAGGAAAGgtgagtgtcgtgtagtttttgggctg
gcctccccgtcgtgctgagaacttatggttgatggtgggcgaatctgtgg
cagctagcatgtatacgattacatcacgaacctccttatatgatgtggga
atccacgaagggtagaggatattaccatgttggcatttgccatcggctgc
cgcattccggcaattggacagacccctcgggctcctctcccgctcttccg
ctatagatgaggaggatgaccagcggcccggccccctttccaccttttgt
cttgtctgcttatttgtacagaggacaatatctcgcctgccctcttcctt
tcctcctgctgtgcttgtcttagatttcaatcatattacatgtcgtccct
cttctccattccccccccctgcacgcctttcaacccctccctttccctgt
ccccccttctctctcccacatttaccagGAAACAAGTAAAGACCTGACGC
GTATCGAGCGTATTGGCGCCCACTCCCACATTCGTGGCCTTGGCTTGGAC
GATGCTCTCGAACCTCGCGAAGTTAGCCAGGGGATGGTCGGTCAAGCCGG
AGCCCGTCGTGCCGCCGGCGTCGTCTACAAAATGATCAAAGAAGGGAAGA
TTGCAGGCAGAGCCATCCTTCTTGCAGGACAGCCGGGCACGGGGAAGACG
GCCATTGCGATGGGGCTGGCACAGGCCTTGGGAGAAGGGACTCCGTTCAC
GACGATTGCGGGTTCAGAGATTTTTTCTTTGGAAATGTCAAAAACGGAGG
CAATGACACAGGCATTCCGTCGGTCCATTGGGGTGAGGATCATGGAGGAG
ACGGAAATAATCGAGGGGGAGGTGGTGGAGGTTCAGGTGGACACGGCGGC
GGGGGCTGGAGGGAAGACTGGACGGATTACCTTGTGCACGACGGAGATGG
AAACGGTGTATGACCTCGGTGCGAAGATGATTGAGGCATTGCAGAAGGAG
AAGGTTGCGGCGGGGGATGTGATTACGATTGATAAGGCGAGTGGGAAGAT
CTCGAAGTTAGGTCGGTCTTTTTCACGATCGAGGGATTATGATGCCATGG
GGCCTCAGACACGGTTTGTGCAGTGCCCGGAGGGGGAGCTGCAGAAGAGG
AAGGAGATGGTGCATGTGGTGAGTTTGCATGAGATAGACGTGATTAACTC
GAGGCAGCAGGGTTTTCTGGCATTGTTCGCAGGGGATACGGGGGAGATAA
AAGGGGAGGTCCGCGAGCAGATAGACCAGAAGGTGGCGGAGTGGAGGGAG
GAGGGCAAGGCGACTGTGGTCCCGGGGGTGCTTTTTATTGACGAGGTGCA
CATGTTGGACATTGAGTGTTTCTCGTGGTTGAACCGCGCCCTGGAGAGTG
ACCTGGCCCCGGTGCTGATCATGGCGACGAATCGCGGTATGGCCCAGATT
AGGGGAACTGCATACAAGAGCCCGCACGGGATCCCGATTGACCTGCTCGA
TCGGCTTATGATTATTGGCACCTCCCCATATGCCGAGGCAGAGGTGAGGA
AGATCCTTCAGATCAGGTGCGAGGAGGAGGATGTGGAGATGAGCGAGGAT
GCCTTGGAGCTGCTGACCAAGATTGGGATGGAGGCCTCGTTGCGGTATGC
CATCCACATGATCATAGCCGCGTCTCTGGTGGCGCAGAAGCGGAAGGCAG
GGAGTGTGGACGTCCAAGACATCAAGAAGGTGTACTCATTGTTTGTGGAC
GTGAAACGGTCAACTCAGTTCCTGGTCGAGTACCAACAGGAGTTCATGTT
TAATGAGTTGGAGGGAGATGAAGAGGAAGAGGAGGAGGCGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGCCGCGGGCATGGCCGAGGACTAG
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protein sequence of NO16G00930.1

>NO16G00930.1-protein ID=NO16G00930.1-protein|Name=NO16G00930.1|organism=Nannochloropsis oceanica|type=polypeptide|length=479bp
MADLGLGKETSKDLTRIERIGAHSHIRGLGLDDALEPREVSQGMVGQAGA
RRAAGVVYKMIKEGKIAGRAILLAGQPGTGKTAIAMGLAQALGEGTPFTT
IAGSEIFSLEMSKTEAMTQAFRRSIGVRIMEETEIIEGEVVEVQVDTAAG
AGGKTGRITLCTTEMETVYDLGAKMIEALQKEKVAAGDVITIDKASGKIS
KLGRSFSRSRDYDAMGPQTRFVQCPEGELQKRKEMVHVVSLHEIDVINSR
QQGFLALFAGDTGEIKGEVREQIDQKVAEWREEGKATVVPGVLFIDEVHM
LDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDR
LMIIGTSPYAEAEVRKILQIRCEEEDVEMSEDALELLTKIGMEASLRYAI
HMIIAASLVAQKRKAGSVDVQDIKKVYSLFVDVKRSTQFLVEYQQEFMFN
ELEGDEEEEEEAEEEEEEEEEAAGMAED*
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Synonyms
Publications