NO16G00910, NO16G00910 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G00910 vs. NCBI_GenBank
Match: XP_005854095.1 (ubiquitin carboxyl-terminal hydrolase isozyme l3 [Nannochloropsis gaditana CCMP526] >EKU22262.1 ubiquitin carboxyl-terminal hydrolase isozyme l3 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 340.9 bits (873), Expect = 3.000e-90 Identity = 165/218 (75.69%), Postives = 191/218 (87.61%), Query Frame = 0 Query: 1 MRKYVRSLGLLPTFYTFNDILSTEDWALDMVLPPVLAVIFLYPIKAPAETLRREEDARIKEEGQVLSSQLFFTKQTVGNACGTVGLIHAILNNKDKLEFASGSFLENFEKNTQGKTPDERAVILEEDEGLDRAHESAAAEGQSSQISMEEVLNTHFITFVEKEGCLYELDGRKNFPINHGPSSPDTLLRDAMAVVRQVIARDPEELRFTLVALSSAAG 219 M+KYV SLGL+PTFY F D+L TE+WAL+MV+PPVLA+IFLYPIK E R+EEDARIK GQ++S +LFFTKQTVGNACGTVGL+HA+LNNKDKLEF GSFLE+F + TQ KTPDERAVILEEDEGLD AH AAA+GQS Q+ MEE +NTHF+ FVEK+G LYELDGRKNFPINHG SSP+TLL+DAMAVVR+VIA DP+EL+FT+VALSSAAG Sbjct: 1 MQKYVLSLGLIPTFYKFTDVLCTEEWALEMVVPPVLALIFLYPIKPANEIFRQEEDARIKAHGQIVSPRLFFTKQTVGNACGTVGLLHALLNNKDKLEFREGSFLESFAERTQDKTPDERAVILEEDEGLDAAHGCAAADGQSQQVPMEEAINTHFVIFVEKDGYLYELDGRKNFPINHGKSSPETLLQDAMAVVRRVIAMDPQELKFTMVALSSAAG 218
BLAST of NO16G00910 vs. NCBI_GenBank
Match: EWM23999.1 (ubiquitin carboxyl-terminal hydrolase isozyme l3 [Nannochloropsis gaditana]) HSP 1 Score: 340.9 bits (873), Expect = 3.000e-90 Identity = 165/218 (75.69%), Postives = 191/218 (87.61%), Query Frame = 0 Query: 1 MRKYVRSLGLLPTFYTFNDILSTEDWALDMVLPPVLAVIFLYPIKAPAETLRREEDARIKEEGQVLSSQLFFTKQTVGNACGTVGLIHAILNNKDKLEFASGSFLENFEKNTQGKTPDERAVILEEDEGLDRAHESAAAEGQSSQISMEEVLNTHFITFVEKEGCLYELDGRKNFPINHGPSSPDTLLRDAMAVVRQVIARDPEELRFTLVALSSAAG 219 M+KYV SLGL+PTFY F D+L TE+WAL+MV+PPVLA+IFLYPIK E R+EEDARIK GQ++S +LFFTKQTVGNACGTVGL+HA+LNNKDKLEF GSFLE+F + TQ KTPDERAVILEEDEGLD AH AAA+GQS Q+ MEE +NTHF+ FVEK+G LYELDGRKNFPINHG SSP+TLL+DAMAVVR+VIA DP+EL+FT+VALSSAAG Sbjct: 114 MQKYVLSLGLIPTFYKFTDVLCTEEWALEMVVPPVLALIFLYPIKPANEIFRQEEDARIKAHGQIVSPRLFFTKQTVGNACGTVGLLHALLNNKDKLEFREGSFLESFAERTQDKTPDERAVILEEDEGLDAAHGCAAADGQSQQVPMEEAINTHFVIFVEKDGYLYELDGRKNFPINHGKSSPETLLQDAMAVVRRVIAMDPQELKFTMVALSSAAG 331
BLAST of NO16G00910 vs. NCBI_GenBank
Match: XP_009830263.1 (hypothetical protein H257_06651 [Aphanomyces astaci] >ETV80339.1 hypothetical protein H257_06651 [Aphanomyces astaci]) HSP 1 Score: 235.7 bits (600), Expect = 1.400e-58 Identity = 116/221 (52.49%), Postives = 159/221 (71.95%), Query Frame = 0 Query: 1 MRKYVRSLGLL-PTFYTFNDILSTEDWALDMVLPPVLAVIFLYPIKAPAETLRREEDARIKEEGQVLSSQLFFTKQTVGNACGTVGLIHAILNNKDKLEFASGSFLENFEKNTQGKTPDERAVILEEDEGLDRAHESAAAEGQSSQIS-MEEVLNTHFITFVEKEGCLYELDGRKNFPINHGPSSPDTLLRDAMAVVRQVIARDPEELRFTLVALSSAAGD 220 M +Y+R +G+ + F D+ ST+DWAL+MVL PVL V+ L+PIK E ++E RI+++GQ++S +++ KQTVGNACGTVG++HA+ N +D L GSFL +F T GKTPDE A IL+ D+ ++ H SAA +GQS Q+ +++ +NTHF+ F +G LYELDGRK FPINHGPSSP+TLL DA AV+RQ +ARD E+RFT+VAL+ A D Sbjct: 22 MNEYIRRMGIAEDAEFAFCDVYSTDDWALEMVLRPVLGVVMLFPIKPATEDHAKQERERIEKDGQIVSKNVYYMKQTVGNACGTVGILHALGNARDYLPPRHGSFLSSFFSKTDGKTPDEIAAILQADDEIEETHASAAQDGQSEQLEHVDDPINTHFVCFSVVDGHLYELDGRKEFPINHGPSSPETLLGDACAVIRQFMARDEGEVRFTIVALAKALTD 242
BLAST of NO16G00910 vs. NCBI_GenBank
Match: XP_008861077.1 (hypothetical protein H310_00181 [Aphanomyces invadans] >ETW09666.1 hypothetical protein H310_00181 [Aphanomyces invadans]) HSP 1 Score: 232.6 bits (592), Expect = 1.100e-57 Identity = 116/221 (52.49%), Postives = 159/221 (71.95%), Query Frame = 0 Query: 1 MRKYVRSLGL-LPTFYTFNDILSTEDWALDMVLPPVLAVIFLYPIKAPAETLRREEDARIKEEGQVLSSQLFFTKQTVGNACGTVGLIHAILNNKDKLEFASGSFLENFEKNTQGKTPDERAVILEEDEGLDRAHESAAAEGQSSQIS-MEEVLNTHFITFVEKEGCLYELDGRKNFPINHGPSSPDTLLRDAMAVVRQVIARDPEELRFTLVALSSAAGD 220 M +Y+R +G+ + F D+ ST++WAL+MVL PVL V+ L+PIK +E +E+ RI++EGQ++S ++F KQTVGNACGTVG++HA+ N KD L GSFL +F T GKTPDE A IL++D+ ++ H SAA EGQS Q+ +++ +NTHF+ F +G LYELDGRK FP+NHGPSS +TLL DA V+RQ +ARD E+RFT+VAL+ A D Sbjct: 20 MNEYIRRMGIPEDADFAFCDLYSTDEWALEMVLRPVLGVVMLFPIKPVSELHAKEQLERIEKEGQIVSPNVYFMKQTVGNACGTVGILHALGNAKDYLPPRDGSFLSSFFSKTVGKTPDEIAAILQDDDEIEETHASAAQEGQSEQLERVDDPINTHFVCFSVVDGHLYELDGRKKFPVNHGPSSQETLLEDACRVIRQFMARDEGEVRFTIVALAKALTD 240
BLAST of NO16G00910 vs. NCBI_GenBank
Match: XP_008605871.1 (hypothetical protein SDRG_02084 [Saprolegnia diclina VS20] >EQC41027.1 hypothetical protein SDRG_02084 [Saprolegnia diclina VS20]) HSP 1 Score: 228.8 bits (582), Expect = 1.700e-56 Identity = 118/221 (53.39%), Postives = 156/221 (70.59%), Query Frame = 0 Query: 1 MRKYVRSLGL-LPTFYTFNDILSTEDWALDMVLPPVLAVIFLYPIKAPAETLRREEDARIKEEGQVLSSQLFFTKQTVGNACGTVGLIHAILNNKDKLEFASGSFLENFEKNTQGKTPDERAVILEEDEGLDRAHESAAAEGQSSQIS-MEEVLNTHFITFVEKEGCLYELDGRKNFPINHGPSSPDTLLRDAMAVVRQVIARDPEELRFTLVALSSAAGD 220 M +Y + +GL + + F D+ STEDWALDMVL PVLAVI L+PIK E +EE RI+ GQV+S +++ KQTVGNACGTVG++HA+ N D + + GSFL+ F + T+ KTPDE AVILE D+ L+ H SAA EGQS Q+ +++ +NTHF+ F +G LYELDGRK F INHGPSS +TLL DA V++ + RD E+RFT+VAL+S + D Sbjct: 22 MNEYAKRMGLPADSAFEFCDVYSTEDWALDMVLRPVLAVIMLFPIKTHTEAYAKEERQRIEVSGQVVSPNVYYMKQTVGNACGTVGILHALGNVGDYVAYQPGSFLQTFFEKTRTKTPDEIAVILEGDDELEETHASAAQEGQSEQLEHVDDPINTHFVCFCTVDGHLYELDGRKAFAINHGPSSRETLLEDACRVIQSFMQRDAGEVRFTIVALASKSHD 242
BLAST of NO16G00910 vs. NCBI_GenBank
Match: XP_012204555.1 (hypothetical protein SPRG_10207 [Saprolegnia parasitica CBS 223.65] >KDO24674.1 hypothetical protein SPRG_10207 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 225.3 bits (573), Expect = 1.800e-55 Identity = 115/215 (53.49%), Postives = 152/215 (70.70%), Query Frame = 0 Query: 1 MRKYVRSLGL-LPTFYTFNDILSTEDWALDMVLPPVLAVIFLYPIKAPAETLRREEDARIKEEGQVLSSQLFFTKQTVGNACGTVGLIHAILNNKDKLEFASGSFLENFEKNTQGKTPDERAVILEEDEGLDRAHESAAAEGQSSQIS-MEEVLNTHFITFVEKEGCLYELDGRKNFPINHGPSSPDTLLRDAMAVVRQVIARDPEELRFTLVAL 214 M +Y + +GL + + F D+ STEDWALDMVL PVLAVI L+PIK E +EE RI+ GQV+S +++ KQTVGNACGTVG++HA+ N D + + GSFL+ F + T+ KTP+E AVILE D+ L+ H SAA EGQS Q+ +++ +NTHF+ F + LYELDGRK FPINHGPSS +TLL DA V++ + RD E+RFT+VAL Sbjct: 22 MNEYAKRMGLPADSAFEFCDVYSTEDWALDMVLRPVLAVIMLFPIKTHTEAYAKEERQRIEASGQVVSPNVYYMKQTVGNACGTVGILHALGNVGDYVAYQPGSFLQTFFEKTRAKTPEEIAVILEGDDELEETHASAAQEGQSEQLEHVDDPINTHFVCFCTVDDHLYELDGRKAFPINHGPSSRETLLEDACRVIQSFMQRDDGEVRFTIVAL 236
BLAST of NO16G00910 vs. NCBI_GenBank
Match: OQS00212.1 (ubiquitin carboxyl-terminal hydrolase [Thraustotheca clavata]) HSP 1 Score: 224.6 bits (571), Expect = 3.100e-55 Identity = 115/216 (53.24%), Postives = 152/216 (70.37%), Query Frame = 0 Query: 1 MRKYVRSLGLLPTF-YTFNDILSTEDWALDMVLPPVLAVIFLYPIKAPAETLRREEDARIKEEGQVLSSQLFFTKQTVGNACGTVGLIHAILNNKDKLEFASGSFLENFEKNTQGKTPDERAVILEEDEGLDRAHESAAAEGQSSQIS-MEEVLNTHFITFVEKEGCLYELDGRKNFPINHGPSSPDTLLRDAMAVVRQVIARDPEELRFTLVALS 215 M Y+R +G+ Y F D+ STEDWALDMVL PVLAVI L+PIKA E + + RI + GQ +S ++F KQTVGNACGTVG++HA+ N KD ++F GSFL+ F K+T+GKTP+E A ILEED+ L+ H SAA EGQS Q+ +++ +NTHF+ F + LYELDGRK FPINHG SS D +L +A ++ + RD E+RFT+VAL+ Sbjct: 20 MNDYIRRMGVPDDCEYEFCDVYSTEDWALDMVLRPVLAVIMLFPIKAHTEEFAKGQQERIVKGGQYVSPNVYFMKQTVGNACGTVGILHALGNVKDAIKFREGSFLDTFFKSTRGKTPEEIAAILEEDDELEENHTSAAQEGQSDQLEHVDDPINTHFVCFTTVDDKLYELDGRKAFPINHGLSSDDLVLENACNIINGYMQRDEGEIRFTIVALA 235
BLAST of NO16G00910 vs. NCBI_GenBank
Match: XP_009533861.1 (hypothetical protein PHYSODRAFT_337880 [Phytophthora sojae] >EGZ11116.1 hypothetical protein PHYSODRAFT_337880 [Phytophthora sojae]) HSP 1 Score: 223.8 bits (569), Expect = 5.300e-55 Identity = 110/218 (50.46%), Postives = 155/218 (71.10%), Query Frame = 0 Query: 1 MRKYVRSLGLLPTFYTFNDILSTEDWALDMVLPPVLAVIFLYPIKAPAETLRREEDARIKEEGQVLSSQLFFTKQTVGNACGTVGLIHAILNNKDKLEFASGSFLENFEKNTQGKTPDERAVILEEDEGLDRAHESAAAEGQSSQI-SMEEVLNTHFITFVEKEGCLYELDGRKNFPINHGPSSPDTLLRDAMAVVRQVIARDPEELRFTLVALSSAA 218 M YV +G ++F D+LSTE+WAL MV PV+AVI L+PIK E ++E ARI+++GQ +S +++ +QTVGNACGTVG++HAI N + ++ GS+L+ F T+ KTP+E A LEED+ L+ H SAA GQS Q+ S+++ +NTHF+ F +G LYELDGRK PINHGPSSPDT+L+DA V+++ +ARD E+RFT++AL+ A Sbjct: 116 MNAYVEKMGFPTGHFSFCDVLSTEEWALGMVPSPVVAVIMLFPIKPHTEEADKQEAARIEKDGQTVSPNVYYMRQTVGNACGTVGILHAIGNMRHHVQLTPGSYLDKFFNKTKTKTPEEIAQYLEEDDELEETHSSAAEAGQSEQLESVDDPINTHFVCFSCVDGNLYELDGRKKRPINHGPSSPDTVLQDACQVIKKFMARDEGEMRFTILALAKTA 333
BLAST of NO16G00910 vs. NCBI_GenBank
Match: OQR86527.1 (ubiquitin carboxyl-terminal hydrolase [Achlya hypogyna]) HSP 1 Score: 222.6 bits (566), Expect = 1.200e-54 Identity = 115/216 (53.24%), Postives = 151/216 (69.91%), Query Frame = 0 Query: 1 MRKYVRSLGL-LPTFYTFNDILSTEDWALDMVLPPVLAVIFLYPIKAPAETLRREEDARIKEEGQVLSSQLFFTKQTVGNACGTVGLIHAILNNKDKLEFASGSFLENFEKNTQGKTPDERAVILEEDEGLDRAHESAAAEGQSSQIS-MEEVLNTHFITFVEKEGCLYELDGRKNFPINHGPSSPDTLLRDAMAVVRQVIARDPEELRFTLVALS 215 M +Y++ +GL + + F D+ STEDWALDMV PVLAVI L+PIKA E + E RI++ GQ +S +++ KQTVGNACGTVG++HA+ N + + F GSFL++F T+ KTP E A ILEED+ L+ H SAA EGQS Q+ +++ +NTHF+ +G LYELDGRK FPINHGPSS TLL DA VVR + RD E+RFT+VAL+ Sbjct: 22 MNEYIKRMGLPADSAFEFCDVYSTEDWALDMVPRPVLAVIMLFPIKAHTEAYAKAEHERIEKNGQAVSPNVYYMKQTVGNACGTVGILHALGNAGEHMTFTHGSFLQSFFAKTRDKTPAEIAEILEEDDELEETHASAAQEGQSDQLEHIDDPINTHFVCLSVVDGHLYELDGRKAFPINHGPSSSATLLEDACRVVRDFMQRDEGEVRFTIVALA 237
BLAST of NO16G00910 vs. NCBI_GenBank
Match: XP_002895509.1 (ubiquitin carboxyl-terminal hydrolase, putative [Phytophthora infestans T30-4] >EEY56259.1 ubiquitin carboxyl-terminal hydrolase, putative [Phytophthora infestans T30-4]) HSP 1 Score: 220.7 bits (561), Expect = 4.500e-54 Identity = 108/220 (49.09%), Postives = 155/220 (70.45%), Query Frame = 0 Query: 1 MRKYVRSLGLLPTFYTFNDILSTEDWALDMVLPPVLAVIFLYPIKAPAETLRREEDARIKEEGQVLSSQLFFTKQTVGNACGTVGLIHAILNNKDKLEFASGSFLENFEKNTQGKTPDERAVILEEDEGLDRAHESAAAEGQSSQI-SMEEVLNTHFITFVEKEGCLYELDGRKNFPINHGPSSPDTLLRDAMAVVRQVIARDPEELRFTLVALSSAAGD 220 M YV +G + ++F D+LSTE+WAL MV PV+ VI L+PIK E ++E RI+++GQ +S +++ +QTVGNACGTVG++HAI N + ++ GS+L+ F T+ K+PDE A LEED+ L+ H SAA GQS Q+ S+++ +NTHF+ F +G LYELDGRK PINHGPSSPDT+L+DA V+++ +ARD E+RFT++AL+ A + Sbjct: 20 MNSYVEKMGFPTSQFSFCDVLSTEEWALAMVPTPVVGVIMLFPIKPHTEEADKQEAVRIEKDGQTVSPNVYYMRQTVGNACGTVGILHAIGNMRHLVQLTPGSYLDKFFNKTKTKSPDEIAQFLEEDDELEETHGSAAEAGQSEQLESVDDPINTHFVCFSCVDGNLYELDGRKKRPINHGPSSPDTVLQDACQVIKKFMARDEGEVRFTILALAKTASE 239 The following BLAST results are available for this feature:
BLAST of NO16G00910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G00910 ID=NO16G00910|Name=NO16G00910|organism=Nannochloropsis oceanica|type=gene|length=666bpback to top protein sequence of NO16G00910.1 >NO16G00910.1-protein ID=NO16G00910.1-protein|Name=NO16G00910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=222bpback to top Synonyms
Publications
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