NO16G00870, NO16G00870 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G00870 vs. NCBI_GenBank
Match: EWM24040.1 (Poly A polymerase, head domain protein [Nannochloropsis gaditana]) HSP 1 Score: 404.4 bits (1038), Expect = 4.700e-109 Identity = 204/232 (87.93%), Postives = 217/232 (93.53%), Query Frame = 0 Query: 188 EVPSIPLSPEEAQLFDTMLAVVEDEQLGTTLRVAGGWVRDKVLGHWSADGKVDIDIALDNMMGSEFAATLNRWLAKRGRQVYNVGIISANPEKSKHLETATMRVGSFWIDFVNLRTEAYTDESRIPSMNIGSPQEDALRRDLTINALYYNMNTGQIEDFTGQGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDDLVAAASDVRVHKALESKVSRERIGSE 420 E PSIPLSP E++LF TMLAVV+DE LGTTLRVAGGWVRDKVLGHWSADG+VDIDIALDN+MGS+FAA LN WLAKRGRQVYNVGIISANP KSKHLETATMRVGSF IDFVNLRTEAYTDESRIPSM IGSP+EDA+RRDLTINAL+YN++TGQIEDF G+GLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISD+LV AASD RVH AL KVSRERIGSE Sbjct: 178 ESPSIPLSPAESRLFKTMLAVVKDENLGTTLRVAGGWVRDKVLGHWSADGEVDIDIALDNLMGSDFAAMLNGWLAKRGRQVYNVGIISANPTKSKHLETATMRVGSFSIDFVNLRTEAYTDESRIPSMGIGSPEEDAMRRDLTINALFYNLHTGQIEDFCGRGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDELVVAASDPRVHGALAHKVSRERIGSE 409
BLAST of NO16G00870 vs. NCBI_GenBank
Match: CBJ26899.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 313.9 bits (803), Expect = 8.300e-82 Identity = 158/272 (58.09%), Postives = 205/272 (75.37%), Query Frame = 0 Query: 192 IPLSPEEAQLFDTMLAVVEDEQLGTTLRVAGGWVRDKVLG--------HWSADGKVDIDIALDNMMGSEFAATLNRWLAKR------GRQVYNVGIISANPEKSKHLETATMRVGSFWIDFVNLRTEAYTDESRIPSMNIGSPQEDALRRDLTINALYYNMNTGQIEDFTGQGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDDLVAAASDVRVHKALESKVSRERIGSEVDLMVRSAQPARAMALIGELGLAATVFPSP 450 I L+ EE +LF T+L +VE E++GTTLRVAGGWVRDK++G H S K+DIDIALDN MG +FAA LNR+L++R +++ V +I++NPEKSKHLETAT+R+ +FW+DFVNLRTE+Y +SRIPS+NIG+P ED+ RRDLTIN+L+YN+NTG +ED+TG+G D+R G++RTPLP TLLDDPLR LRAVRFASRL F + +L+ A D +VH+AL KVSRER+G E+D MVRSA P RA L+ + + VFP P Sbjct: 125 IILTKEEDKLFKTLLEMVEKEKMGTTLRVAGGWVRDKLVGQEQGFHQRHLSKVNKMDIDIALDNCMGGDFAARLNRYLSRRKSDPGARKRMSKVALIASNPEKSKHLETATLRIDNFWVDFVNLRTESYVQDSRIPSINIGTPMEDSFRRDLTINSLFYNVNTGTVEDYTGKGTSDLRLGLVRTPLPPCETLLDDPLRALRAVRFASRLGFRVHPELMEAGRDPKVHEALCMKVSRERVGCELDQMVRSASPLRAFELMEGMKILPMVFPLP 396
BLAST of NO16G00870 vs. NCBI_GenBank
Match: OEU10534.1 (PolyA_pol-domain-containing protein, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 300.1 bits (767), Expect = 1.200e-77 Identity = 165/298 (55.37%), Postives = 196/298 (65.77%), Query Frame = 0 Query: 190 PSIPLSPEEAQLFDTMLAVVEDEQLGTTLRVAGGWVRDKVL---------GHWSADGK------------------------------VDIDIALDNMMGSEFAATLNRWLAKRGRQVYNVGIISANPEKSKHLETATMRVGSFWIDFVNLRTEAYTDESRIPS-MNIGSPQEDALRRDLTINALYYNMNTGQIEDFTGQGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDDLVAAASDVRVHKALESKVSRERIGSEVDLMVRSAQPARAMALIGELGLAATVFP 448 P I LSPEE +LF + ++ L TT+RVAGGWVRDK+L G DGK VDIDIALD+M+G EFA LN L+K G + + VG++ NPEKSKHLETATM+VG+FWIDFVNLR E YT +SRIP M IG+P EDA RRDLTIN+L+YN+N GQ+ED+TG+G D+R V+ TPL LTTLLDDPLR LR+VRFA+RL F++ D LV AA D RV KAL KVSRERIG EVDLM+RS P AM L+ L LA TVFP Sbjct: 7 PYINLSPEERELFRLIRKARDESGLSTTMRVAGGWVRDKLLATPEFTRTYGKVIGDGKKXXXXXXXXXXXXXXXXXXXXXXXXXQHEPVDIDIALDDMLGREFAELLNECLSKMGEKTHGVGVVLKNPEKSKHLETATMKVGTFWIDFVNLRAEEYTQDSRIPDLMRIGTPSEDAFRRDLTINSLFYNVNNGQVEDWTGRGFEDLRRCVVSTPLAPLTTLLDDPLRTLRSVRFAARLRFTMDDALVEAAMDDRVRKALAEKVSRERIGCEVDLMLRSPDPVGAMRLLINLNLARTVFP 304
BLAST of NO16G00870 vs. NCBI_GenBank
Match: OSX68871.1 (hypothetical protein BU14_2146s0001 [Porphyra umbilicalis]) HSP 1 Score: 293.5 bits (750), Expect = 1.200e-75 Identity = 144/267 (53.93%), Postives = 197/267 (73.78%), Query Frame = 0 Query: 192 IPLSPEEAQLFDTMLAVVEDEQLGTTLRVAGGWVRDKVLGHWSADGKVDIDIALDNMMGSEFAATLNRWL-AKRGRQVYNVGIISANPEKSKHLETATMRVGSFWIDFVNLRTEAYTDESRIPSMNIGSPQEDALRRDLTINALYYNMNTGQIEDFTGQGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDDLVAAASDVRVHKALESKVSRERIGSEVDLMVRSAQPARAMALIGELGLAATVFPSPAIEERGEG 458 + L+ E +LF + VV +++L TTLRVAGGWVRDK++G +VDIDIA+D+M+G+ FA N WL A+ G + +++G+I NPE+SKHLETA M+V WID VNLRTE YT +SRIP++ +GSPQEDA+RRDLTINAL+YN+NTG +ED+TGQG+ D++ ++RTPLP TTLLDDPLR LRAVRFA+RL FS+ +L+ A D VH A SK+SRER+ +EVD ++R+ R + L+ ELGL VF + + ++ +G Sbjct: 140 LELTELEQELFSKLQRVVAEKKLDTTLRVAGGWVRDKLIG--GPMPEVDIDIAVDSMLGASFAELFNEWLEAETGERQHSIGVIHRNPEQSKHLETARMKVMGLWIDLVNLRTETYTHDSRIPNIELGSPQEDAMRRDLTINALFYNINTGVVEDWTGQGVNDIQRRIVRTPLPPRTTLLDDPLRALRAVRFAARLRFSMDGELITACQDTDVHAAFSSKISRERVFTEVDAIIRAPSAVRGVGLLSELGLFPLVFRTDNVGDKVDG 404
BLAST of NO16G00870 vs. NCBI_GenBank
Match: XP_002186516.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65986.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 292.4 bits (747), Expect = 2.600e-75 Identity = 162/299 (54.18%), Postives = 194/299 (64.88%), Query Frame = 0 Query: 190 PSIPLSPEEAQLFDTMLAVVEDEQLGTTLRVAGGWVRDKVLG-------HWSAD---------------------------------GKVDIDIALDNMMGSEFAATLNRWLAKRGRQVYNVGIISANPEKSKHLETATMRVGSFWIDFVNLRTEAYTDESRIPS-MNIGSPQEDALRRDLTINALYYNMNTGQIEDFTGQGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDDLVAAASDVRVHKALESKVSRERIGSEVDLMVRSAQPARAMALIGELGLAATVFP 448 PSI L+ EE LF + V + +L TTLRVAGGWVRDK+L H D VDIDIALD+M+G EFA LN +L+ G+ VG++ NPEKSKHLETATM+VGSFWIDFVNLR E YT SRIP M IG+ EDA RRDLTINAL+YN+N+GQ+ED+TG+G D+R+GV+ TPLP LTTLLDDPLR LR+VRFA+RL F++ D+LVAAA D V AL KVSRER+G E+DLM+RS P AM L+ L L TVFP Sbjct: 102 PSIQLTEEERALFTLLRQVRSETKLDTTLRVAGGWVRDKLLATPEFQTYHKVLDVGSQRLTSKFQKPSAPSMGRQGTKVLVNTDKDAQPVDIDIALDDMLGREFADRLNEYLSMEGQDTIAVGVVLKNPEKSKHLETATMKVGSFWIDFVNLRAEEYTQASRIPDLMRIGTAAEDAFRRDLTINALFYNVNSGQVEDWTGRGFDDLRKGVVATPLPPLTTLLDDPLRALRSVRFAARLRFTMDDELVAAAKDKSVRNALAQKVSRERVGGELDLMLRSPDPVGAMRLLINLRLIDTVFP 400
BLAST of NO16G00870 vs. NCBI_GenBank
Match: GAX22700.1 (tRNA nucleotidyltransferase [Fistulifera solaris]) HSP 1 Score: 290.8 bits (743), Expect = 7.600e-75 Identity = 158/299 (52.84%), Postives = 193/299 (64.55%), Query Frame = 0 Query: 190 PSIPLSPEEAQLFDTMLAVVEDEQLGTTLRVAGGWVRDKVLG----------------------------------------HWSADGKVDIDIALDNMMGSEFAATLNRWLAKRGRQVYNVGIISANPEKSKHLETATMRVGSFWIDFVNLRTEAYTDESRIPS-MNIGSPQEDALRRDLTINALYYNMNTGQIEDFTGQGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDDLVAAASDVRVHKALESKVSRERIGSEVDLMVRSAQPARAMALIGELGLAATVFP 448 PSI L+ EE LF+ + V E L TTLRVAGGWVRDK+L S++ VDIDIALD+M+G EFA LN +L +G +VG++ NPEKSKHLETATM+V SFWIDFVNLR E YT +SRIP M IG+ +EDA RRDLTINAL+YN+NTGQ+ED+TG+G D+R G++ TPL LTTLLDDPLRVLR++RFA+RL F + +L A+A D RV AL KVSRER+G E+DLM+RS P AM L+ L L TVFP Sbjct: 79 PSIHLTDEEKHLFNLLRHVREKTNLNTTLRVAGGWVRDKLLATPEFQTYHKVFDIGGNRLTSKFQKPAPSLGRQGTKVLVSTDESSNSPVDIDIALDDMLGREFADHLNEYLTSQGEDTVSVGVVLKNPEKSKHLETATMKVDSFWIDFVNLRAEEYTQDSRIPDLMRIGTAEEDAFRRDLTINALFYNINTGQVEDWTGRGFDDLRRGIVATPLAPLTTLLDDPLRVLRSIRFAARLRFGMDPELKASAMDDRVRTALGQKVSRERVGGEIDLMLRSPDPVGAMRLLINLKLVDTVFP 377
BLAST of NO16G00870 vs. NCBI_GenBank
Match: GAX19227.1 (tRNA nucleotidyltransferase [Fistulifera solaris]) HSP 1 Score: 290.0 bits (741), Expect = 1.300e-74 Identity = 158/299 (52.84%), Postives = 193/299 (64.55%), Query Frame = 0 Query: 190 PSIPLSPEEAQLFDTMLAVVEDEQLGTTLRVAGGWVRDKVLG----------------------------------------HWSADGKVDIDIALDNMMGSEFAATLNRWLAKRGRQVYNVGIISANPEKSKHLETATMRVGSFWIDFVNLRTEAYTDESRIPS-MNIGSPQEDALRRDLTINALYYNMNTGQIEDFTGQGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDDLVAAASDVRVHKALESKVSRERIGSEVDLMVRSAQPARAMALIGELGLAATVFP 448 PSI L+ EE QLF+ + V E L TTLRVAGGWVRDK+L S++ VDIDIALD+M+G EFA LN +L +G +VG++ NPEKSKHLETATM+V SFWIDFVNLR E YT +SRIP M IG+ +EDA RRDLTINAL+YN+NTGQ+ED+T +G D+R G++ TPL LTTLLDDPLRVLR++RFA+RL F + +L A+A D RV AL KVSRER+G E+DLM+RS P AM L+ L L TVFP Sbjct: 79 PSIHLTDEEKQLFNLLRHVREKTNLNTTLRVAGGWVRDKLLATPEFQTYHKVFDIGGNRLTSKFQKPAPSLGRQGTKVLVSRDESSNSPVDIDIALDDMLGREFADHLNEYLTSQGEDTVSVGVVLKNPEKSKHLETATMKVDSFWIDFVNLRAEEYTQDSRIPDLMRIGTAEEDAFRRDLTINALFYNINTGQVEDWTRRGFDDLRRGIVATPLAPLTTLLDDPLRVLRSIRFAARLRFGMDPELKASAMDDRVRSALGQKVSRERVGGEIDLMLRSPDPVGAMRLLINLKLVDTVFP 377
BLAST of NO16G00870 vs. NCBI_GenBank
Match: XP_012758000.1 (hypothetical protein SAMD00019534_019550 [Acytostelium subglobosum LB1] >GAM18780.1 hypothetical protein SAMD00019534_019550 [Acytostelium subglobosum LB1]) HSP 1 Score: 289.3 bits (739), Expect = 2.200e-74 Identity = 143/262 (54.58%), Postives = 193/262 (73.66%), Query Frame = 0 Query: 188 EVPSIPLSPEEAQLFDTMLAVVEDEQLGTTLRVAGGWVRDKVLGHWSADGKVDIDIALDNMMGSEFAATLNRWLAKRGRQVYNVGIISANPEKSKHLETATMRVGSFWIDFVNLRTEAYTDESRIPSMNIGSPQEDALRRDLTINALYYNMNTGQIEDFTGQGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDDLVAAASDVRVHKALESKVSRERIGSEVDLMVRSAQPARAMALIGELGLAATVFPSP 450 E + +S E +LF+ +L VVE + GTTLRVAGGWVRDK+ G D DIDIALDN+MG FA+ +N++L ++ + +G+I +NP +SKHLETAT+R+ WIDFVNLR+E YT+ESRIP++ IG+PQEDA RRDLTIN+L+YN+N +IEDFTG G+ D+ G++RTPLP TT LDDPLRVLR++RFA+RL ++I LV AAS +V +AL+SKVS ER+G E++ M+ +P A+ LI +LGL +F P Sbjct: 100 ETVPLYISETERRLFEVLLQVVEKSKCGTTLRVAGGWVRDKLRG----DDSSDIDIALDNLMGEAFASLVNQYLQDHNQETHRIGVIQSNPSQSKHLETATVRIFDMWIDFVNLRSETYTEESRIPTIQIGTPQEDAFRRDLTINSLFYNINENKIEDFTGNGINDLMCGIVRTPLPPQTTFLDDPLRVLRSIRFATRLYYAIDHKLVEAASSPKVKEALKSKVSHERVGIELEGMLSGPRPDLAIHLIHDLGLFDHIFSLP 357
BLAST of NO16G00870 vs. NCBI_GenBank
Match: XP_629100.1 (hypothetical protein DDB_G0293504 [Dictyostelium discoideum AX4] >EAL60687.1 hypothetical protein DDB_G0293504 [Dictyostelium discoideum AX4]) HSP 1 Score: 288.9 bits (738), Expect = 2.900e-74 Identity = 144/264 (54.55%), Postives = 191/264 (72.35%), Query Frame = 0 Query: 188 EVPSIPLSPEEAQLFDTMLAVVEDEQLGTTLRVAGGWVRDKVLGHWSADGKVDIDIALDNMMGSEFAATLNRWLAKRGRQVYNVGIISANPEKSKHLETATMRVGSFWIDFVNLRTEAYTDESRIPSMNIGSPQEDALRRDLTINALYYNMNTGQIEDFTGQGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDDLVAAASDVRVHKALESKVSRERIGSEVDLMVRSAQPARAMALIGELGLAATVFPSPAI 452 E I L+ E QLF ++ V+ D GTTLRVAGGWVRDK+ G D DIDI LDNMMG FA +N+ L+ + Q + +G+I +NPE+SKHLETAT++V WIDFVNLR+E+YTD SRIP ++IG+P +DALRRDLTIN+L++N+N +IEDFTGQG+ D+R+G+IRTPLP+LTT LDDPLRV R++RFASRL F I ++L A SD V A++SK+S ERI E D M+ + +P ++ LI + GL +F P + Sbjct: 65 ESVDIRLTECEIQLFKELMHVIRDSGCGTTLRVAGGWVRDKLRG----DDSNDIDITLDNMMGEAFAELVNKHLSSKHHQTHRIGVIQSNPEQSKHLETATVKVFDMWIDFVNLRSESYTDTSRIPVISIGTPLQDALRRDLTINSLFFNINENRIEDFTGQGINDLRDGIIRTPLPSLTTFLDDPLRVFRSIRFASRLNFKIDEELFKAGSDPVVKDAIKSKISHERIAKEFDGMLSAEEPYLSIELINKFGLFDCLFSLPTV 324
BLAST of NO16G00870 vs. NCBI_GenBank
Match: XP_002501305.1 (predicted protein [Micromonas commoda] >ACO62563.1 predicted protein [Micromonas commoda]) HSP 1 Score: 288.5 bits (737), Expect = 3.700e-74 Identity = 144/256 (56.25%), Postives = 188/256 (73.44%), Query Frame = 0 Query: 191 SIPLSPEEAQLFDTMLAVVEDEQLGTTLRVAGGWVRDKVLGHWSADGKVDIDIALDNMMGSEFAATLNRWLAKRGRQVYNVGIISANPEKSKHLETATMRVGSFWIDFVNLRTEAYTDESRIPSMNIGSPQEDALRRDLTINALYYNMNTGQIEDFTGQGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDDLVAAASDVRVHKALESKVSRERIGSEVDLMVRSAQPARAMALIGELGLAATVF 447 ++ + EE ++F T+L VV+ +L TLRVAGGWVRDK+LG S+ DIDIALD MMG EFAA +N +L ++G + + VG+I +NP++SKHLETATMRV W+D VNLR+E YT+ SRIP M GS +DA RRDLTIN+L+YN+N +EDFTG GL+D+++GV+RTPLP TT LDDPLR+LR+VRFASR FS+ D +V AA+D V + L SKVSRER+G EV M+R P A++L+ L TVF Sbjct: 145 TVVCTAEEEKIFGTLLDVVKRYELPVTLRVAGGWVRDKLLGKHSS----DIDIALDTMMGEEFAAKVNEYLQEKGEETHGVGVIQSNPDQSKHLETATMRVHGQWLDLVNLRSEEYTEASRIPEMKFGSATDDAYRRDLTINSLFYNINLRCVEDFTGMGLKDLQDGVVRTPLPPRTTFLDDPLRILRSVRFASRFGFSLDDAIVHAATDAEVQEKLLSKVSRERVGKEVQGMLRGPSPGDALSLLCRFNLFDTVF 396 The following BLAST results are available for this feature:
BLAST of NO16G00870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G00870 ID=NO16G00870|Name=NO16G00870|organism=Nannochloropsis oceanica|type=gene|length=1562bpback to top protein sequence of NO16G00870.1 >NO16G00870.1-protein ID=NO16G00870.1-protein|Name=NO16G00870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=472bpback to top Synonyms
Publications
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