NO16G00870, NO16G00870 (gene) Nannochloropsis oceanica

Overview
NameNO16G00870
Unique NameNO16G00870
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1562
Alignment locationchr16:287333..288894 +

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Properties
Property NameValue
DescriptionPoly A polymerase, head domain protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:287333..288894 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0016779nucleotidyltransferase activity
GO:0016740transferase activity
GO:0003723RNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006396RNA processing
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR002646PolA_pol_head_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO16G00870 vs. NCBI_GenBank
Match: EWM24040.1 (Poly A polymerase, head domain protein [Nannochloropsis gaditana])

HSP 1 Score: 404.4 bits (1038), Expect = 4.700e-109
Identity = 204/232 (87.93%), Postives = 217/232 (93.53%), Query Frame = 0
Query:  188 EVPSIPLSPEEAQLFDTMLAVVEDEQLGTTLRVAGGWVRDKVLGHWSADGKVDIDIALDNMMGSEFAATLNRWLAKRGRQVYNVGIISANPEKSKHLETATMRVGSFWIDFVNLRTEAYTDESRIPSMNIGSPQEDALRRDLTINALYYNMNTGQIEDFTGQGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDDLVAAASDVRVHKALESKVSRERIGSE 420
            E PSIPLSP E++LF TMLAVV+DE LGTTLRVAGGWVRDKVLGHWSADG+VDIDIALDN+MGS+FAA LN WLAKRGRQVYNVGIISANP KSKHLETATMRVGSF IDFVNLRTEAYTDESRIPSM IGSP+EDA+RRDLTINAL+YN++TGQIEDF G+GLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISD+LV AASD RVH AL  KVSRERIGSE
Sbjct:  178 ESPSIPLSPAESRLFKTMLAVVKDENLGTTLRVAGGWVRDKVLGHWSADGEVDIDIALDNLMGSDFAAMLNGWLAKRGRQVYNVGIISANPTKSKHLETATMRVGSFSIDFVNLRTEAYTDESRIPSMGIGSPEEDAMRRDLTINALFYNLHTGQIEDFCGRGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDELVVAASDPRVHGALAHKVSRERIGSE 409          
BLAST of NO16G00870 vs. NCBI_GenBank
Match: CBJ26899.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 313.9 bits (803), Expect = 8.300e-82
Identity = 158/272 (58.09%), Postives = 205/272 (75.37%), Query Frame = 0
Query:  192 IPLSPEEAQLFDTMLAVVEDEQLGTTLRVAGGWVRDKVLG--------HWSADGKVDIDIALDNMMGSEFAATLNRWLAKR------GRQVYNVGIISANPEKSKHLETATMRVGSFWIDFVNLRTEAYTDESRIPSMNIGSPQEDALRRDLTINALYYNMNTGQIEDFTGQGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDDLVAAASDVRVHKALESKVSRERIGSEVDLMVRSAQPARAMALIGELGLAATVFPSP 450
            I L+ EE +LF T+L +VE E++GTTLRVAGGWVRDK++G        H S   K+DIDIALDN MG +FAA LNR+L++R       +++  V +I++NPEKSKHLETAT+R+ +FW+DFVNLRTE+Y  +SRIPS+NIG+P ED+ RRDLTIN+L+YN+NTG +ED+TG+G  D+R G++RTPLP   TLLDDPLR LRAVRFASRL F +  +L+ A  D +VH+AL  KVSRER+G E+D MVRSA P RA  L+  + +   VFP P
Sbjct:  125 IILTKEEDKLFKTLLEMVEKEKMGTTLRVAGGWVRDKLVGQEQGFHQRHLSKVNKMDIDIALDNCMGGDFAARLNRYLSRRKSDPGARKRMSKVALIASNPEKSKHLETATLRIDNFWVDFVNLRTESYVQDSRIPSINIGTPMEDSFRRDLTINSLFYNVNTGTVEDYTGKGTSDLRLGLVRTPLPPCETLLDDPLRALRAVRFASRLGFRVHPELMEAGRDPKVHEALCMKVSRERVGCELDQMVRSASPLRAFELMEGMKILPMVFPLP 396          
BLAST of NO16G00870 vs. NCBI_GenBank
Match: OEU10534.1 (PolyA_pol-domain-containing protein, partial [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 300.1 bits (767), Expect = 1.200e-77
Identity = 165/298 (55.37%), Postives = 196/298 (65.77%), Query Frame = 0
Query:  190 PSIPLSPEEAQLFDTMLAVVEDEQLGTTLRVAGGWVRDKVL---------GHWSADGK------------------------------VDIDIALDNMMGSEFAATLNRWLAKRGRQVYNVGIISANPEKSKHLETATMRVGSFWIDFVNLRTEAYTDESRIPS-MNIGSPQEDALRRDLTINALYYNMNTGQIEDFTGQGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDDLVAAASDVRVHKALESKVSRERIGSEVDLMVRSAQPARAMALIGELGLAATVFP 448
            P I LSPEE +LF  +    ++  L TT+RVAGGWVRDK+L         G    DGK                              VDIDIALD+M+G EFA  LN  L+K G + + VG++  NPEKSKHLETATM+VG+FWIDFVNLR E YT +SRIP  M IG+P EDA RRDLTIN+L+YN+N GQ+ED+TG+G  D+R  V+ TPL  LTTLLDDPLR LR+VRFA+RL F++ D LV AA D RV KAL  KVSRERIG EVDLM+RS  P  AM L+  L LA TVFP
Sbjct:    7 PYINLSPEERELFRLIRKARDESGLSTTMRVAGGWVRDKLLATPEFTRTYGKVIGDGKKXXXXXXXXXXXXXXXXXXXXXXXXXQHEPVDIDIALDDMLGREFAELLNECLSKMGEKTHGVGVVLKNPEKSKHLETATMKVGTFWIDFVNLRAEEYTQDSRIPDLMRIGTPSEDAFRRDLTINSLFYNVNNGQVEDWTGRGFEDLRRCVVSTPLAPLTTLLDDPLRTLRSVRFAARLRFTMDDALVEAAMDDRVRKALAEKVSRERIGCEVDLMLRSPDPVGAMRLLINLNLARTVFP 304          
BLAST of NO16G00870 vs. NCBI_GenBank
Match: OSX68871.1 (hypothetical protein BU14_2146s0001 [Porphyra umbilicalis])

HSP 1 Score: 293.5 bits (750), Expect = 1.200e-75
Identity = 144/267 (53.93%), Postives = 197/267 (73.78%), Query Frame = 0
Query:  192 IPLSPEEAQLFDTMLAVVEDEQLGTTLRVAGGWVRDKVLGHWSADGKVDIDIALDNMMGSEFAATLNRWL-AKRGRQVYNVGIISANPEKSKHLETATMRVGSFWIDFVNLRTEAYTDESRIPSMNIGSPQEDALRRDLTINALYYNMNTGQIEDFTGQGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDDLVAAASDVRVHKALESKVSRERIGSEVDLMVRSAQPARAMALIGELGLAATVFPSPAIEERGEG 458
            + L+  E +LF  +  VV +++L TTLRVAGGWVRDK++G      +VDIDIA+D+M+G+ FA   N WL A+ G + +++G+I  NPE+SKHLETA M+V   WID VNLRTE YT +SRIP++ +GSPQEDA+RRDLTINAL+YN+NTG +ED+TGQG+ D++  ++RTPLP  TTLLDDPLR LRAVRFA+RL FS+  +L+ A  D  VH A  SK+SRER+ +EVD ++R+    R + L+ ELGL   VF +  + ++ +G
Sbjct:  140 LELTELEQELFSKLQRVVAEKKLDTTLRVAGGWVRDKLIG--GPMPEVDIDIAVDSMLGASFAELFNEWLEAETGERQHSIGVIHRNPEQSKHLETARMKVMGLWIDLVNLRTETYTHDSRIPNIELGSPQEDAMRRDLTINALFYNINTGVVEDWTGQGVNDIQRRIVRTPLPPRTTLLDDPLRALRAVRFAARLRFSMDGELITACQDTDVHAAFSSKISRERVFTEVDAIIRAPSAVRGVGLLSELGLFPLVFRTDNVGDKVDG 404          
BLAST of NO16G00870 vs. NCBI_GenBank
Match: XP_002186516.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65986.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 292.4 bits (747), Expect = 2.600e-75
Identity = 162/299 (54.18%), Postives = 194/299 (64.88%), Query Frame = 0
Query:  190 PSIPLSPEEAQLFDTMLAVVEDEQLGTTLRVAGGWVRDKVLG-------HWSAD---------------------------------GKVDIDIALDNMMGSEFAATLNRWLAKRGRQVYNVGIISANPEKSKHLETATMRVGSFWIDFVNLRTEAYTDESRIPS-MNIGSPQEDALRRDLTINALYYNMNTGQIEDFTGQGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDDLVAAASDVRVHKALESKVSRERIGSEVDLMVRSAQPARAMALIGELGLAATVFP 448
            PSI L+ EE  LF  +  V  + +L TTLRVAGGWVRDK+L        H   D                                   VDIDIALD+M+G EFA  LN +L+  G+    VG++  NPEKSKHLETATM+VGSFWIDFVNLR E YT  SRIP  M IG+  EDA RRDLTINAL+YN+N+GQ+ED+TG+G  D+R+GV+ TPLP LTTLLDDPLR LR+VRFA+RL F++ D+LVAAA D  V  AL  KVSRER+G E+DLM+RS  P  AM L+  L L  TVFP
Sbjct:  102 PSIQLTEEERALFTLLRQVRSETKLDTTLRVAGGWVRDKLLATPEFQTYHKVLDVGSQRLTSKFQKPSAPSMGRQGTKVLVNTDKDAQPVDIDIALDDMLGREFADRLNEYLSMEGQDTIAVGVVLKNPEKSKHLETATMKVGSFWIDFVNLRAEEYTQASRIPDLMRIGTAAEDAFRRDLTINALFYNVNSGQVEDWTGRGFDDLRKGVVATPLPPLTTLLDDPLRALRSVRFAARLRFTMDDELVAAAKDKSVRNALAQKVSRERVGGELDLMLRSPDPVGAMRLLINLRLIDTVFP 400          
BLAST of NO16G00870 vs. NCBI_GenBank
Match: GAX22700.1 (tRNA nucleotidyltransferase [Fistulifera solaris])

HSP 1 Score: 290.8 bits (743), Expect = 7.600e-75
Identity = 158/299 (52.84%), Postives = 193/299 (64.55%), Query Frame = 0
Query:  190 PSIPLSPEEAQLFDTMLAVVEDEQLGTTLRVAGGWVRDKVLG----------------------------------------HWSADGKVDIDIALDNMMGSEFAATLNRWLAKRGRQVYNVGIISANPEKSKHLETATMRVGSFWIDFVNLRTEAYTDESRIPS-MNIGSPQEDALRRDLTINALYYNMNTGQIEDFTGQGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDDLVAAASDVRVHKALESKVSRERIGSEVDLMVRSAQPARAMALIGELGLAATVFP 448
            PSI L+ EE  LF+ +  V E   L TTLRVAGGWVRDK+L                                           S++  VDIDIALD+M+G EFA  LN +L  +G    +VG++  NPEKSKHLETATM+V SFWIDFVNLR E YT +SRIP  M IG+ +EDA RRDLTINAL+YN+NTGQ+ED+TG+G  D+R G++ TPL  LTTLLDDPLRVLR++RFA+RL F +  +L A+A D RV  AL  KVSRER+G E+DLM+RS  P  AM L+  L L  TVFP
Sbjct:   79 PSIHLTDEEKHLFNLLRHVREKTNLNTTLRVAGGWVRDKLLATPEFQTYHKVFDIGGNRLTSKFQKPAPSLGRQGTKVLVSTDESSNSPVDIDIALDDMLGREFADHLNEYLTSQGEDTVSVGVVLKNPEKSKHLETATMKVDSFWIDFVNLRAEEYTQDSRIPDLMRIGTAEEDAFRRDLTINALFYNINTGQVEDWTGRGFDDLRRGIVATPLAPLTTLLDDPLRVLRSIRFAARLRFGMDPELKASAMDDRVRTALGQKVSRERVGGEIDLMLRSPDPVGAMRLLINLKLVDTVFP 377          
BLAST of NO16G00870 vs. NCBI_GenBank
Match: GAX19227.1 (tRNA nucleotidyltransferase [Fistulifera solaris])

HSP 1 Score: 290.0 bits (741), Expect = 1.300e-74
Identity = 158/299 (52.84%), Postives = 193/299 (64.55%), Query Frame = 0
Query:  190 PSIPLSPEEAQLFDTMLAVVEDEQLGTTLRVAGGWVRDKVLG----------------------------------------HWSADGKVDIDIALDNMMGSEFAATLNRWLAKRGRQVYNVGIISANPEKSKHLETATMRVGSFWIDFVNLRTEAYTDESRIPS-MNIGSPQEDALRRDLTINALYYNMNTGQIEDFTGQGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDDLVAAASDVRVHKALESKVSRERIGSEVDLMVRSAQPARAMALIGELGLAATVFP 448
            PSI L+ EE QLF+ +  V E   L TTLRVAGGWVRDK+L                                           S++  VDIDIALD+M+G EFA  LN +L  +G    +VG++  NPEKSKHLETATM+V SFWIDFVNLR E YT +SRIP  M IG+ +EDA RRDLTINAL+YN+NTGQ+ED+T +G  D+R G++ TPL  LTTLLDDPLRVLR++RFA+RL F +  +L A+A D RV  AL  KVSRER+G E+DLM+RS  P  AM L+  L L  TVFP
Sbjct:   79 PSIHLTDEEKQLFNLLRHVREKTNLNTTLRVAGGWVRDKLLATPEFQTYHKVFDIGGNRLTSKFQKPAPSLGRQGTKVLVSRDESSNSPVDIDIALDDMLGREFADHLNEYLTSQGEDTVSVGVVLKNPEKSKHLETATMKVDSFWIDFVNLRAEEYTQDSRIPDLMRIGTAEEDAFRRDLTINALFYNINTGQVEDWTRRGFDDLRRGIVATPLAPLTTLLDDPLRVLRSIRFAARLRFGMDPELKASAMDDRVRSALGQKVSRERVGGEIDLMLRSPDPVGAMRLLINLKLVDTVFP 377          
BLAST of NO16G00870 vs. NCBI_GenBank
Match: XP_012758000.1 (hypothetical protein SAMD00019534_019550 [Acytostelium subglobosum LB1] >GAM18780.1 hypothetical protein SAMD00019534_019550 [Acytostelium subglobosum LB1])

HSP 1 Score: 289.3 bits (739), Expect = 2.200e-74
Identity = 143/262 (54.58%), Postives = 193/262 (73.66%), Query Frame = 0
Query:  188 EVPSIPLSPEEAQLFDTMLAVVEDEQLGTTLRVAGGWVRDKVLGHWSADGKVDIDIALDNMMGSEFAATLNRWLAKRGRQVYNVGIISANPEKSKHLETATMRVGSFWIDFVNLRTEAYTDESRIPSMNIGSPQEDALRRDLTINALYYNMNTGQIEDFTGQGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDDLVAAASDVRVHKALESKVSRERIGSEVDLMVRSAQPARAMALIGELGLAATVFPSP 450
            E   + +S  E +LF+ +L VVE  + GTTLRVAGGWVRDK+ G    D   DIDIALDN+MG  FA+ +N++L    ++ + +G+I +NP +SKHLETAT+R+   WIDFVNLR+E YT+ESRIP++ IG+PQEDA RRDLTIN+L+YN+N  +IEDFTG G+ D+  G++RTPLP  TT LDDPLRVLR++RFA+RL ++I   LV AAS  +V +AL+SKVS ER+G E++ M+   +P  A+ LI +LGL   +F  P
Sbjct:  100 ETVPLYISETERRLFEVLLQVVEKSKCGTTLRVAGGWVRDKLRG----DDSSDIDIALDNLMGEAFASLVNQYLQDHNQETHRIGVIQSNPSQSKHLETATVRIFDMWIDFVNLRSETYTEESRIPTIQIGTPQEDAFRRDLTINSLFYNINENKIEDFTGNGINDLMCGIVRTPLPPQTTFLDDPLRVLRSIRFATRLYYAIDHKLVEAASSPKVKEALKSKVSHERVGIELEGMLSGPRPDLAIHLIHDLGLFDHIFSLP 357          
BLAST of NO16G00870 vs. NCBI_GenBank
Match: XP_629100.1 (hypothetical protein DDB_G0293504 [Dictyostelium discoideum AX4] >EAL60687.1 hypothetical protein DDB_G0293504 [Dictyostelium discoideum AX4])

HSP 1 Score: 288.9 bits (738), Expect = 2.900e-74
Identity = 144/264 (54.55%), Postives = 191/264 (72.35%), Query Frame = 0
Query:  188 EVPSIPLSPEEAQLFDTMLAVVEDEQLGTTLRVAGGWVRDKVLGHWSADGKVDIDIALDNMMGSEFAATLNRWLAKRGRQVYNVGIISANPEKSKHLETATMRVGSFWIDFVNLRTEAYTDESRIPSMNIGSPQEDALRRDLTINALYYNMNTGQIEDFTGQGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDDLVAAASDVRVHKALESKVSRERIGSEVDLMVRSAQPARAMALIGELGLAATVFPSPAI 452
            E   I L+  E QLF  ++ V+ D   GTTLRVAGGWVRDK+ G    D   DIDI LDNMMG  FA  +N+ L+ +  Q + +G+I +NPE+SKHLETAT++V   WIDFVNLR+E+YTD SRIP ++IG+P +DALRRDLTIN+L++N+N  +IEDFTGQG+ D+R+G+IRTPLP+LTT LDDPLRV R++RFASRL F I ++L  A SD  V  A++SK+S ERI  E D M+ + +P  ++ LI + GL   +F  P +
Sbjct:   65 ESVDIRLTECEIQLFKELMHVIRDSGCGTTLRVAGGWVRDKLRG----DDSNDIDITLDNMMGEAFAELVNKHLSSKHHQTHRIGVIQSNPEQSKHLETATVKVFDMWIDFVNLRSESYTDTSRIPVISIGTPLQDALRRDLTINSLFFNINENRIEDFTGQGINDLRDGIIRTPLPSLTTFLDDPLRVFRSIRFASRLNFKIDEELFKAGSDPVVKDAIKSKISHERIAKEFDGMLSAEEPYLSIELINKFGLFDCLFSLPTV 324          
BLAST of NO16G00870 vs. NCBI_GenBank
Match: XP_002501305.1 (predicted protein [Micromonas commoda] >ACO62563.1 predicted protein [Micromonas commoda])

HSP 1 Score: 288.5 bits (737), Expect = 3.700e-74
Identity = 144/256 (56.25%), Postives = 188/256 (73.44%), Query Frame = 0
Query:  191 SIPLSPEEAQLFDTMLAVVEDEQLGTTLRVAGGWVRDKVLGHWSADGKVDIDIALDNMMGSEFAATLNRWLAKRGRQVYNVGIISANPEKSKHLETATMRVGSFWIDFVNLRTEAYTDESRIPSMNIGSPQEDALRRDLTINALYYNMNTGQIEDFTGQGLRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDDLVAAASDVRVHKALESKVSRERIGSEVDLMVRSAQPARAMALIGELGLAATVF 447
            ++  + EE ++F T+L VV+  +L  TLRVAGGWVRDK+LG  S+    DIDIALD MMG EFAA +N +L ++G + + VG+I +NP++SKHLETATMRV   W+D VNLR+E YT+ SRIP M  GS  +DA RRDLTIN+L+YN+N   +EDFTG GL+D+++GV+RTPLP  TT LDDPLR+LR+VRFASR  FS+ D +V AA+D  V + L SKVSRER+G EV  M+R   P  A++L+    L  TVF
Sbjct:  145 TVVCTAEEEKIFGTLLDVVKRYELPVTLRVAGGWVRDKLLGKHSS----DIDIALDTMMGEEFAAKVNEYLQEKGEETHGVGVIQSNPDQSKHLETATMRVHGQWLDLVNLRSEEYTEASRIPEMKFGSATDDAYRRDLTINSLFYNINLRCVEDFTGMGLKDLQDGVVRTPLPPRTTFLDDPLRILRSVRFASRFGFSLDDAIVHAATDAEVQEKLLSKVSRERVGKEVQGMLRGPSPGDALSLLCRFNLFDTVF 396          
The following BLAST results are available for this feature:
BLAST of NO16G00870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24040.14.700e-10987.93Poly A polymerase, head domain protein [Nannochlor... [more]
CBJ26899.18.300e-8258.09conserved unknown protein [Ectocarpus siliculosus][more]
OEU10534.11.200e-7755.37PolyA_pol-domain-containing protein, partial [Frag... [more]
OSX68871.11.200e-7553.93hypothetical protein BU14_2146s0001 [Porphyra umbi... [more]
XP_002186516.12.600e-7554.18predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX22700.17.600e-7552.84tRNA nucleotidyltransferase [Fistulifera solaris][more]
GAX19227.11.300e-7452.84tRNA nucleotidyltransferase [Fistulifera solaris][more]
XP_012758000.12.200e-7454.58hypothetical protein SAMD00019534_019550 [Acytoste... [more]
XP_629100.12.900e-7454.55hypothetical protein DDB_G0293504 [Dictyostelium d... [more]
XP_002501305.13.700e-7456.25predicted protein [Micromonas commoda] >ACO62563.1... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL150nonsL150Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003072NSK003072Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G00870.1NO16G00870.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|649149gene_5962Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G00870.1NO16G00870.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G00870 ID=NO16G00870|Name=NO16G00870|organism=Nannochloropsis oceanica|type=gene|length=1562bp
ATGGCCTCCAATTTCCCCTTCAACCTACAGCAATATCAGCAACAACGCCT
GCGCACGCGTATTCGGACAGAGCGGTCTGACACGCATGATATGAGGATAT
CCTTCCTCCGGCGTCTACGCTCCCCCATCCCCTCCCTTTCCCCCCTTCTC
CTTGGCTTCGTCATGATGCTCTCTCTGACCTCAATCTCCCGTGTATGCGC
CTTACGTCGTAGCAGCAGCGTGGCCACGGCAGCAACAAGGGCAACAAGAC
GGTCTCTTTATAGTGTCTCTAGGTTTGCCTTCCTCCCAGTCTCCTTCTCC
CCACTCTCCACCACCACGCCCCAGAGCCGAAGACCCCCTCTCTTTGAGCC
ATTTGCGGGAGGCAGCAGTAGTGGTAGCAGCAGCAGCGGCAGCAGCATCA
TCATCAGCAATGCTGGTAGTGGGCGCCCACAAGCTCCGTCGTCACGACTG
ACTGCAGTGGTATCACGCAGCAGCAAACGGAGCAAGAGCACGTCGAGCAG
CAGCAGCTCCACTACCACCGGCACCACCAGCGGTGATGGAGGAGGAGAAG
GAGGAGGACGTGAAGTCCCTTCTATTCCCCTTTCTCCCGAAGAAGCCCAA
CTGTTTGATACGATGCTTGCCGTGGTAGAAGACGAGCAACTCGGCACCAC
ATTACGCGTAGCGGGCGGCTGGGTCCGTGATAAAGTGTTGGGACATTGGA
GCGCAGATGGGAAAGTAGATATAGACATCGCCCTTGATAATATGATGGGC
TCTGAGTTCGCGGCGACGCTGAACAGGTGGCTGGCCAAGCGAGGGAGACA
GGTGTATAACGTTGGGATAATTTCCGCGAATCCGGAGAAAAGCAAGCACC
TGGAGACAGCGACAATGCGCGTGGGGTCGTTTTGGATTGATTTTGTGAAT
TTGAGGACTGAGGCCTACACTGATGAGAGTCGGATTCCGTCGATGAATAT
AGGGAGTCCCCAGGAGGATGCGCTGAGgcaagcagggaggaaggaaagga
ggggacggaagggagggagggggcggttggtttcctgcttttgggcccat
aaatctaggtccgtacatgtacgctctcatccctcccttcctccctccct
ccctccccttttcctcccgttagACGTGACCTGACAATCAATGCGCTTTA
CTACAACATGAACACGGGGCAAATCGAAGACTTTACAGGGCAGGGTTTGC
GGGACATGCGCGAGGGAGTGATCCGTACCCCATTGCCGGCCCTCACTACC
CTCCTCGACGACCCGTTGCGGGTGTTGCGTGCCGTAAGATTTGCTTCCCG
CCTTGCCTTCTCGATCAGCGACGATCTCGTGGCGGCGGCTTCGGACGTGC
GCGTGCATAAGGCGTTGGAGAGCAAAGTGAGTCGGGAAAGGATCGGCTCG
GAAGTGGACTTGATGGTCCGGAGCGCTCAACCCGCGCGGGCTATGGCCCT
CATCGGTGAACTCGGTCTGGCGGCCACTGTCTTCCCATCCCCCGCGATAG
AGGAGAGAGGCGAAGGGGAGGGGGGAAGGAGGGAGGGGTGGCGTGGTTTG
GGCTGGGTTTGA
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protein sequence of NO16G00870.1

>NO16G00870.1-protein ID=NO16G00870.1-protein|Name=NO16G00870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=472bp
MASNFPFNLQQYQQQRLRTRIRTERSDTHDMRISFLRRLRSPIPSLSPLL
LGFVMMLSLTSISRVCALRRSSSVATAATRATRRSLYSVSRFAFLPVSFS
PLSTTTPQSRRPPLFEPFAGGSSSGSSSSGSSIIISNAGSGRPQAPSSRL
TAVVSRSSKRSKSTSSSSSSTTTGTTSGDGGGEGGGREVPSIPLSPEEAQ
LFDTMLAVVEDEQLGTTLRVAGGWVRDKVLGHWSADGKVDIDIALDNMMG
SEFAATLNRWLAKRGRQVYNVGIISANPEKSKHLETATMRVGSFWIDFVN
LRTEAYTDESRIPSMNIGSPQEDALRRDLTINALYYNMNTGQIEDFTGQG
LRDMREGVIRTPLPALTTLLDDPLRVLRAVRFASRLAFSISDDLVAAASD
VRVHKALESKVSRERIGSEVDLMVRSAQPARAMALIGELGLAATVFPSPA
IEERGEGEGGRREGWRGLGWV*
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