NO16G00850, NO16G00850 (gene) Nannochloropsis oceanica

Overview
NameNO16G00850
Unique NameNO16G00850
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1686
Alignment locationchr16:272688..274373 +

Link to JBrowse

Properties
Property NameValue
DescriptionEpsilon 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:272688..274373 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
GO:0003924GTPase activity
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0005874microtubule
GO:0005874microtubule
Vocabulary: Biological Process
TermDefinition
GO:0007017microtubule-based process
GO:0007017microtubule-based process
Vocabulary: INTERPRO
TermDefinition
IPR008280Tub_FtsZ_C
IPR036525Tubulin/FtsZ_GTPase_sf
IPR003008Tubulin_FtsZ_GTPase
IPR018316Tubulin/FtsZ_2-layer-sand-dom
IPR004057Epsilon_tubulin
IPR000217Tubulin
Homology
BLAST of NO16G00850 vs. NCBI_GenBank
Match: XP_005854276.1 (epsilon tubulin [Nannochloropsis gaditana CCMP526] >EKU22081.1 epsilon tubulin [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 573.2 bits (1476), Expect = 9.100e-160
Identity = 350/552 (63.41%), Postives = 393/552 (71.20%), Query Frame = 0
Query:    1 MPREVITLQVGQAGNQIGRRFWEQALEEHCQPTEDKDANEGGIVYTESMSXXXXXXXXXXDEYQLGSRKTTNCRHSSIVKRGRLKARAVLVDMEEGPVAETLRGPLGPLFDSHQYLTDVSGAGNNFAHGHYAYGAQYGDNVMEAVRGAAEMCDSLQSFFLMHSLGGGTGSGLGTYILGLLEDEFPNVHRFTTTVFPSEDDDVVTSPYNSMLALQQLTAHADCVLPVENQCLMDLNSQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVTGPTLAMRRECGFDGMNDIVARVLLDLTASMRFGGDLNVDLNEITTNLVPFPRLHYLMTSLSLYPSAISSSPHIGNHEWAPLGGSSAAHAAASLHLRTICSAVFSRPNQLLRSDPRRGTVLASALLFRGRGLSLADITENVKKIQKDIRMVSWNPDGFKIGLCGTPS--SSSFXXXXXXXXXXXSLSNNSCVATTFERMALRFDRLYRRKAMVHHYAEYMDASLMEEAREDLCQVIDGYRALEA 551
            MPREVITLQVGQAGNQIGRRFWEQALEEHCQP ED D   G + +T+SMS          D+   G+ +    R   IVK G LKARAVLVDMEEGPV ETLRGPL  LFDSHQ LTDVSGAGNNFAHGH+ YG QYG++V+EAVR AAE+CDSLQSFFLMHSLGGGTGSGLGTYIL LLED+FP VHRF T +FPSEDDDVVTSPYNS+LALQQLTAHADCVLPVENQ LM L +                                          XXXXXXXXXXXXXXXXX                  A R  CGFDGMND+VAR+LLDLTASMRFGG+LNVDLNEITTNLVP+PRLHYLM+SLSL  S+ + +      EW PLG   +A AAASLHLR ICS VF+R NQLLR+DPR+G+VLA ALLFRG+ LSLAD+TENVKK+Q+++ M SWN DGFKIGLC          XXXXXXXXXXX       V +TF R+  RF +LYRR+AMVHHYAEYMD +L+EEAREDL  +I+ Y  + A
Sbjct:    1 MPREVITLQVGQAGNQIGRRFWEQALEEHCQPDEDDD--HGELKFTDSMS--SFFHLHDNDDLICGTARKVRDR---IVKPGALKARAVLVDMEEGPVTETLRGPLRGLFDSHQSLTDVSGAGNNFAHGHHCYGPQYGESVLEAVRQAAELCDSLQSFFLMHSLGGGTGSGLGTYILTLLEDDFPQVHRFVTAIFPSEDDDVVTSPYNSVLALQQLTAHADCVLPVENQSLMTLAAPFPWVTRSGSTVAGFHRPSTMDRLLAPPCPPVGLPKEGKMRPXXXXXXXXXXXXXXXXXRGAAGGL--------EQAAERPACGFDGMNDLVARLLLDLTASMRFGGELNVDLNEITTNLVPYPRLHYLMSSLSL--SSSTGTSRNNAQEWEPLG---SAQAAASLHLRQICSKVFARENQLLRADPRQGSVLACALLFRGQELSLADVTENVKKLQREMNMASWNKDGFKIGLCQATGXXXXXXXXXXXXXXXXXXXXXXXXVTSTFLRLLGRFQKLYRRRAMVHHYAEYMDVTLLEEAREDLRGLIEEYHGVGA 532          
BLAST of NO16G00850 vs. NCBI_GenBank
Match: EWM24048.1 (epsilon 1 [Nannochloropsis gaditana])

HSP 1 Score: 573.2 bits (1476), Expect = 9.100e-160
Identity = 350/552 (63.41%), Postives = 393/552 (71.20%), Query Frame = 0
Query:    1 MPREVITLQVGQAGNQIGRRFWEQALEEHCQPTEDKDANEGGIVYTESMSXXXXXXXXXXDEYQLGSRKTTNCRHSSIVKRGRLKARAVLVDMEEGPVAETLRGPLGPLFDSHQYLTDVSGAGNNFAHGHYAYGAQYGDNVMEAVRGAAEMCDSLQSFFLMHSLGGGTGSGLGTYILGLLEDEFPNVHRFTTTVFPSEDDDVVTSPYNSMLALQQLTAHADCVLPVENQCLMDLNSQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVTGPTLAMRRECGFDGMNDIVARVLLDLTASMRFGGDLNVDLNEITTNLVPFPRLHYLMTSLSLYPSAISSSPHIGNHEWAPLGGSSAAHAAASLHLRTICSAVFSRPNQLLRSDPRRGTVLASALLFRGRGLSLADITENVKKIQKDIRMVSWNPDGFKIGLCGTPS--SSSFXXXXXXXXXXXSLSNNSCVATTFERMALRFDRLYRRKAMVHHYAEYMDASLMEEAREDLCQVIDGYRALEA 551
            MPREVITLQVGQAGNQIGRRFWEQALEEHCQP ED D   G + +T+SMS          D+   G+ +    R   IVK G LKARAVLVDMEEGPV ETLRGPL  LFDSHQ LTDVSGAGNNFAHGH+ YG QYG++V+EAVR AAE+CDSLQSFFLMHSLGGGTGSGLGTYIL LLED+FP VHRF T +FPSEDDDVVTSPYNS+LALQQLTAHADCVLPVENQ LM L +                                          XXXXXXXXXXXXXXXXX                  A R  CGFDGMND+VAR+LLDLTASMRFGG+LNVDLNEITTNLVP+PRLHYLM+SLSL  S+ + +      EW PLG   +A AAASLHLR ICS VF+R NQLLR+DPR+G+VLA ALLFRG+ LSLAD+TENVKK+Q+++ M SWN DGFKIGLC          XXXXXXXXXXX       V +TF R+  RF +LYRR+AMVHHYAEYMD +L+EEAREDL  +I+ Y  + A
Sbjct:    8 MPREVITLQVGQAGNQIGRRFWEQALEEHCQPDEDDD--HGELKFTDSMS--SFFHLHDNDDLICGTARKVRDR---IVKPGALKARAVLVDMEEGPVTETLRGPLRGLFDSHQSLTDVSGAGNNFAHGHHCYGPQYGESVLEAVRQAAELCDSLQSFFLMHSLGGGTGSGLGTYILTLLEDDFPQVHRFVTAIFPSEDDDVVTSPYNSVLALQQLTAHADCVLPVENQSLMTLAAPFPWVTRSGSTVAGFHRPSTMDRLLAPPCPPVGLPKEGKMRPXXXXXXXXXXXXXXXXXRGAAGGL--------EQAAERPACGFDGMNDLVARLLLDLTASMRFGGELNVDLNEITTNLVPYPRLHYLMSSLSL--SSSTGTSRNNAQEWEPLG---SAQAAASLHLRQICSKVFARENQLLRADPRQGSVLACALLFRGQELSLADVTENVKKLQREMNMASWNKDGFKIGLCQATGXXXXXXXXXXXXXXXXXXXXXXXXVTSTFLRLLGRFQKLYRRRAMVHHYAEYMDVTLLEEAREDLRGLIEEYHGVGA 539          
BLAST of NO16G00850 vs. NCBI_GenBank
Match: XP_008868497.1 (hypothetical protein H310_05537 [Aphanomyces invadans] >ETW03113.1 hypothetical protein H310_05537 [Aphanomyces invadans])

HSP 1 Score: 434.1 bits (1115), Expect = 6.600e-118
Identity = 244/549 (44.44%), Postives = 317/549 (57.74%), Query Frame = 0
Query:    1 MPREVITLQVGQAGNQIGRRFWEQALEEHCQPTEDKDANEGGIVYTESMSXXXXXXXXXXDEYQLGSRKTTNCRHSSIVKRGRLKARAVLVDMEEGPVAETLRGPLGPLFDSHQYLTDVSGAGNNFAHGHYAYGAQYGDNVMEAVRGAAEMCDSLQSFFLMHSLGGGTGSGLGTYILGLLEDEFPNVHRFTTTVFPSEDDDVVTSPYNSMLALQQLTAHADCVLPVENQCLMDLNSQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVTGPTLAMRRECGFDGMNDIVARVLLDLTASMRFGGDLNVDLNEITTNLVPFPRLHYLMTSLS-LYPSAISSSPHIGNHEWAPLGGSSAAHAAASLHLRTICSAVFSRPNQLLRSDPRRGTVLASALLFRGRGLSLADITENVKKIQKDIRMVSWNPDGFKIGLCGTPSSSSFXXXXXXXXXXXSLSNNSCVATTFERMALRFDRLYRRKAMVHHYAEYMDASLMEEAREDLCQVIDGYRAL 549
            MPRE+IT+QVGQ GNQIGR+FW+ AL+EH    +D         + ESMS           E  +         H +I     L+ARA+LVDMEEGPV+ETL+GPLG LFDS Q++TDVSG+GNN+AHGH  YG QY + ++E +R A E+CDSLQSFF++HS+GGGTGSGLGTYILGLLED +P+  RFTT +FPS DDDV+TSPYNSMLAL++LT HADCVLP+EN+ L D+  +                                                                         P  +  +E  FD MN IVAR L  LT+SMRF G LNVDLNEITTNLVPFP+LHYL++S++ L+P  +   P   N  +                        F R  QL++++P+ GT+LA  LL RG  + ++DI  N+++IQ ++RM+ WN DGFK+GLC  P+               +LSNNSC+  TFERM +RF +L++RKA VHHY +YMDASL +EA E+   +I  Y  L
Sbjct:    1 MPRELITIQVGQCGNQIGRQFWKMALDEHAHHAKD-------ATFDESMSTFFRNVDKQGHELPV---------HEAIAS---LRARAILVDMEEGPVSETLKGPLGELFDSSQFVTDVSGSGNNWAHGHAMYGPQYKEQLLEKLRHATELCDSLQSFFVLHSMGGGTGSGLGTYILGLLEDHYPDAFRFTTAIFPSADDDVITSPYNSMLALRELTDHADCVLPIENEALYDMLEKQ------------------------------------------------------------------------PPQSAPKETAFDKMNAIVARTLTHLTSSMRFDGSLNVDLNEITTNLVPFPKLHYLLSSVAPLWPDKL---PRRVNQMFVD---------------------AFQRDYQLIKTNPKGGTMLACGLLLRG-NVQVSDIQANIQRIQSELRMIPWNVDGFKVGLCSVPA-------LGHPVSLLTLSNNSCIVDTFERMQMRFQKLFKRKAHVHHYLDYMDASLFDEALENARWLIGEYHKL 426          
BLAST of NO16G00850 vs. NCBI_GenBank
Match: XP_009835821.1 (hypothetical protein H257_10834, partial [Aphanomyces astaci] >ETV74734.1 hypothetical protein H257_10834, partial [Aphanomyces astaci])

HSP 1 Score: 430.3 bits (1105), Expect = 9.500e-117
Identity = 243/548 (44.34%), Postives = 311/548 (56.75%), Query Frame = 0
Query:    1 MPREVITLQVGQAGNQIGRRFWEQALEEHCQPTEDKDANEGGIVYTESMSXXXXXXXXXXDEYQLGSRKTTNCRHSSIVKRGRLKARAVLVDMEEGPVAETLRGPLGPLFDSHQYLTDVSGAGNNFAHGHYAYGAQYGDNVMEAVRGAAEMCDSLQSFFLMHSLGGGTGSGLGTYILGLLEDEFPNVHRFTTTVFPSEDDDVVTSPYNSMLALQQLTAHADCVLPVENQCLMDLNSQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVTGPTLAMRRECGFDGMNDIVARVLLDLTASMRFGGDLNVDLNEITTNLVPFPRLHYLMTSLSLYPSAISSSPHIGNHEWAPLGGSSAAHAAASLHLRTICSAVFSRPNQLLRSDPRRGTVLASALLFRGRGLSLADITENVKKIQKDIRMVSWNPDGFKIGLCGTPSSSSFXXXXXXXXXXXSLSNNSCVATTFERMALRFDRLYRRKAMVHHYAEYMDASLMEEAREDLCQVIDGYRAL 549
            MPRE+IT+QVGQ GNQIGR+FW+ AL+EH    ++         + ESMS           E  L         H SI     L+ARA+LVDMEEGPV+ETL+GPLG LFDS Q+LTDVSG+GNN+AHGH  YG QY + ++E +R A E+CDSLQSFF+MHS+GGGTGSGLGTYILGLLED +P   RFTT +FPS DDDV+TSPYNSMLAL++LT HADCVLP+EN+ L D+  +                                                                        G      +E  FD MN IVAR L  LT+SMRF G LNVDLNEITTNLVPFP+LHYL++S+                  APL             +  + S  F R +QL++++P+ G +LA  LL RG  + ++DI  N+++++ ++RM+ WN DGFK+GLC  P+               SLSNNSC+  TFERM  RF +LY+RKA VHHY  YMD S  ++A E++  ++  YR L
Sbjct:    1 MPRELITIQVGQCGNQIGRQFWKMALDEHAHHAKN-------ATFDESMSTFFRNVDKRGHELPL---------HKSITS---LRARAILVDMEEGPVSETLKGPLGELFDSSQFLTDVSGSGNNWAHGHAMYGPQYKEQLLEKLRHATELCDSLQSFFVMHSMGGGTGSGLGTYILGLLEDHYPEAFRFTTAIFPSADDDVITSPYNSMLALRELTLHADCVLPIENEALYDMLEKQ-------------------------------------------------------------------ASQPGAAATRPKESAFDQMNSIVARTLTHLTSSMRFDGSLNVDLNEITTNLVPFPKLHYLLSSV------------------APLWADKVMQPR---RISQMFSDAFQRDHQLIKTNPKGGIMLACGLLLRG-NVQVSDIQANIQRLRAELRMIPWNEDGFKVGLCSVPA-------LGHPVSLLSLSNNSCIVDTFERMHTRFLKLYKRKAHVHHYLAYMDTSAFDDAVENVQWLVAEYRKL 433          
BLAST of NO16G00850 vs. NCBI_GenBank
Match: OWZ16528.1 (Tubulin/FtsZ family protein [Phytophthora megakarya])

HSP 1 Score: 425.2 bits (1092), Expect = 3.100e-115
Identity = 247/558 (44.27%), Postives = 317/558 (56.81%), Query Frame = 0
Query:    1 MPREVITLQVGQAGNQIGRRFWEQALEEHCQPTEDKDANEGGIVYTESMSXXXXXXXXXXDEYQLGSRKTTNCRHSSIVKR---------GRLKARAVLVDMEEGPVAETLRGPLGPLFDSHQYLTDVSGAGNNFAHGHYAYGAQYGDNVMEAVRGAAEMCDSLQSFFLMHSLGGGTGSGLGTYILGLLEDEFPNVHRFTTTVFPSEDDDVVTSPYNSMLALQQLTAHADCVLPVENQCLMDLNSQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVTGPTLAMRRECGFDGMNDIVARVLLDLTASMRFGGDLNVDLNEITTNLVPFPRLHYLMTSLSLYPSAISSSPHIGNHEWAPLGGSSAAHAAASLHLRTICSAVFSRPNQLLRSDPRRGTVLASALLFRGRGLSLADITENVKKIQKDIRMVSWNPDGFKIGLCGTPSSSSFXXXXXXXXXXXSLSNNSCVATTFERMALRFDRLYRRKAMVHHYAEYMDASLMEEAREDLCQVIDGYRALE 550
            MPRE+ITLQVGQ GNQIGR+FW+ ALEEH + +          V+ ESMS                  +  + R+SS V             LKARA+LVDME+GPVAETL GPLG LFD  Q LTDVSG+GNN+AHGH  YG QY   + + VR A E+CDSLQSFF+MHS+GGGTGSGLGTYILGLLED++P+V+RF T VFPSEDDDVVTSPYNS+LAL++LT HADCVLP+EN+ LM L ++                                                                            A ++   F+ MN+IVAR+L +LT+SMRF G LNVDLNEITTNLVPFPRLH+L++S+S                  PLG +S         L  I +  F +  QL+R++PR    LA  LL RG  + ++DI  N++++Q ++RM+ WN +GFK+G+C  P                 LSNNSC+  TFER+  RF +LY RKA +HHY E+MDA +++EA+E+   +I  Y  LE
Sbjct:    1 MPRELITLQVGQCGNQIGRQFWQLALEEHARYST-------RAVFDESMSSFF---------------RNVDTRYSSPVDLPFANGEAPIKSLKARAILVDMEQGPVAETLAGPLGGLFDQQQLLTDVSGSGNNWAHGHCVYGPQYRTQLEDKVRHAVELCDSLQSFFVMHSMGGGTGSGLGTYILGLLEDQYPDVYRFATVVFPSEDDDVVTSPYNSILALRELTEHADCVLPIENEALMGLTARIDRGGKGRVDLRELEQFYKRGKGLQKQSKGKSG------------------------------------------TAQKKTSAFEEMNNIVARLLTNLTSSMRFEGSLNVDLNEITTNLVPFPRLHFLLSSMS------------------PLGATSDPRQQPR-RLNQIFADAFHKDYQLIRANPRASVYLACGLLMRG-NVEVSDINVNIQRLQSEVRMIHWNQEGFKVGVCSVPPVGQ-------KSSLLCLSNNSCIRETFERLNTRFHKLYSRKAHMHHYTEFMDAGMLDEAQENARYLIGEYAKLE 467          
BLAST of NO16G00850 vs. NCBI_GenBank
Match: XP_008916011.1 (hypothetical protein PPTG_19363 [Phytophthora parasitica INRA-310] >ETM98667.1 hypothetical protein PPTG_19363 [Phytophthora parasitica INRA-310] >KUF84210.1 Tubulin epsilon chain [Phytophthora nicotianae])

HSP 1 Score: 418.7 bits (1075), Expect = 2.900e-113
Identity = 240/558 (43.01%), Postives = 315/558 (56.45%), Query Frame = 0
Query:    1 MPREVITLQVGQAGNQIGRRFWEQALEEHCQPTEDKDANEGGIVYTESMSXXXXXXXXXXDEYQLGSRKTTNCRHSSIVKR---------GRLKARAVLVDMEEGPVAETLRGPLGPLFDSHQYLTDVSGAGNNFAHGHYAYGAQYGDNVMEAVRGAAEMCDSLQSFFLMHSLGGGTGSGLGTYILGLLEDEFPNVHRFTTTVFPSEDDDVVTSPYNSMLALQQLTAHADCVLPVENQCLMDLNSQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVTGPTLAMRRECGFDGMNDIVARVLLDLTASMRFGGDLNVDLNEITTNLVPFPRLHYLMTSLSLYPSAISSSPHIGNHEWAPLGGSSAAHAAASLHLRTICSAVFSRPNQLLRSDPRRGTVLASALLFRGRGLSLADITENVKKIQKDIRMVSWNPDGFKIGLCGTPSSSSFXXXXXXXXXXXSLSNNSCVATTFERMALRFDRLYRRKAMVHHYAEYMDASLMEEAREDLCQVIDGYRALE 550
            MPRE+ITLQVGQ GNQIGR+FW+ ALEEH Q  +  +       + ESMS                  +  +CR S  V             LKARA+LVDME+GPVAET+ GPLG LFD  Q LTDVSG+GNN+AHGH  YG +Y + + + +  A E+CDSLQSFF+MHS+GGGTGSGLGTYILGLLED++P+V+RF T VFPSEDDDVVTSPYNSMLAL++LT HADCVLP+EN+ LM L ++                                                                     + T    A ++   F  MN+IVA +L +LT+SMRF G LNVDLNEITTNLVPFP+LH+L++S+S  P   +S P                       L  + +  F + +QL+R++PR    LA  LL RG  + ++DI  N++++Q ++RM+ WN +GFK+G+C  P                 LSNN C+  TFER+  RF +LY RKA +HHY E+MDA +++EA+E+   +I  Y  LE
Sbjct:    1 MPRELITLQVGQCGNQIGRQFWQLALEEHAQNCKRAE-------FDESMSSFF---------------RNVDCRFSPPVDLPFDGGQSPIKSLKARAILVDMEQGPVAETMTGPLGELFDQQQLLTDVSGSGNNWAHGHCLYGPKYREQLEDKLHRAVELCDSLQSFFVMHSMGGGTGSGLGTYILGLLEDQYPDVYRFATVVFPSEDDDVVTSPYNSMLALRELTEHADCVLPIENEALMGLCAK------------IDRGTAAAGTLSANEKQFTRVMGGSRLTDSVDLRELEYFYKSGKVLQTTATQPIKRKNTTARPSAQKKASAFGEMNNIVAHLLTNLTSSMRFQGSLNVDLNEITTNLVPFPKLHFLLSSMS--PVFATSDPR-----------------QQPRRLNQMFTEAFQKDHQLIRANPRASVYLACGLLMRG-NVEVSDINSNIQRMQSEVRMIHWNQEGFKVGICSVPPVGQ-------KSSLLCLSNNCCIRETFERLNTRFHKLYSRKAHMHHYTEFMDADILDEAQENARFLIGEYANLE 497          
BLAST of NO16G00850 vs. NCBI_GenBank
Match: XP_009525802.1 (hypothetical protein PHYSODRAFT_500449 [Phytophthora sojae] >EGZ16744.1 hypothetical protein PHYSODRAFT_500449 [Phytophthora sojae])

HSP 1 Score: 417.9 bits (1073), Expect = 4.900e-113
Identity = 239/550 (43.45%), Postives = 314/550 (57.09%), Query Frame = 0
Query:    1 MPREVITLQVGQAGNQIGRRFWEQALEEHCQPTEDKDANEGGIVYTESMSXXXXXXXXXXDEYQLGSRKTTNCRHSSIVKRGRLKARAVLVDMEEGPVAETLRGPLGPLFDSHQYLTDVSGAGNNFAHGHYAYGAQYGDNVMEAVRGAAEMCDSLQSFFLMHSLGGGTGSGLGTYILGLLEDEFPNVHRFTTTVFPSEDDDVVTSPYNSMLALQQLTAHADCVLPVENQCLMDLNSQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVTGPTLAMRRECGFDGMNDIVARVLLDLTASMRFGGDLNVDLNEITTNLVPFPRLHYLMTSLSLYPSAISSSPHIGNHEWAPLGGSSAAHAAASLHLRTICSAVFSRPNQLLRSDPRRGTVLASALLFRGRGLSLADITENVKKIQKDIRMVSWNPDGFKIGLCGTPSSSSFXXXXXXXXXXXSLSNNSCVATTFERMALRFDRLYRRKAMVHHYAEYMDASLMEEAREDLCQVIDGYRALEA 551
            MPRE+ITLQVGQ GNQIGR+FW+ ALEEH Q       +    V+ ESMS                     N   S+I     LKARA+LVDME+GPVAET+ GPLG LFD  Q LTDVSG+GNN+AHGH  YG +Y + + + +  A E+CDSLQSFF+MHS+GGGTGSGLGTYILGLLED++P+V+RF T VFPSEDDDVVTSPYNSMLAL++LT HADCVLP+EN+ LM++ ++                                                                      +T      + E  F  MN+IVAR+L +LT+SMRF G LNVDLNEITTNLVPFP+LH+L++S+S  P   ++ P                       L  + S  F R +QL+R++PR    LA  LL RG  + ++DI  N++++Q ++RM+ WN +GFK+G+C  P                 LSNN C+  TFER+  RF +LY R+A +HHY E+MD  +++EA+E+   +I  Y  LE+
Sbjct:    1 MPRELITLQVGQCGNQIGRQFWQLALEEHAQ-------HSRRAVFDESMSSFFRNVDARASP---PMDLPFNAGRSAI---RSLKARAILVDMEQGPVAETMAGPLGELFDQQQLLTDVSGSGNNWAHGHCVYGPKYDEQLQDKLHQAVELCDSLQSFFVMHSMGGGTGSGLGTYILGLLEDQYPDVYRFATVVFPSEDDDVVTSPYNSMLALRELTEHADCVLPIENEALMEMCAK-------------------------------------------IDRGTASAALSGFGSEESAARVVDDSRLTDGVDLRQLENAFGEMNNIVARLLTNLTSSMRFEGSLNVDLNEITTNLVPFPKLHFLLSSMS--PVFATADPR-----------------QQPRRLNQMFSEAFQRDHQLIRANPRASVYLACGLLMRG-NVEVSDINANIQRLQSEVRMIHWNQEGFKVGVCSVPPVGQ-------KSSLLCLSNNCCIRETFERLHTRFHKLYSRRAHMHHYTEFMDVGMLDEAQENARYLIGEYAKLES 467          
BLAST of NO16G00850 vs. NCBI_GenBank
Match: XP_024573753.1 (tubulin family [Plasmopara halstedii] >CEG37384.1 tubulin family [Plasmopara halstedii])

HSP 1 Score: 417.9 bits (1073), Expect = 4.900e-113
Identity = 240/549 (43.72%), Postives = 314/549 (57.19%), Query Frame = 0
Query:    1 MPREVITLQVGQAGNQIGRRFWEQALEEHCQPTEDKDANEGGIVYTESMSXXXXXXXXXXDEYQLGSRKTTNCRHSSIVKRGRLKARAVLVDMEEGPVAETLRGPLGPLFDSHQYLTDVSGAGNNFAHGHYAYGAQYGDNVMEAVRGAAEMCDSLQSFFLMHSLGGGTGSGLGTYILGLLEDEFPNVHRFTTTVFPSEDDDVVTSPYNSMLALQQLTAHADCVLPVENQCLMDLNSQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVTGPTLAMRRECGFDGMNDIVARVLLDLTASMRFGGDLNVDLNEITTNLVPFPRLHYLMTSLSLYPSAISSSPHIGNHEWAPLGGSSAAHAAASLHLRTICSAVFSRPNQLLRSDPRRGTVLASALLFRGRGLSLADITENVKKIQKDIRMVSWNPDGFKIGLCGTPSSSSFXXXXXXXXXXXSLSNNSCVATTFERMALRFDRLYRRKAMVHHYAEYMDASLMEEAREDLCQVIDGYRALE 550
            MPRE+ITLQVGQ GNQIGR+FW+ ALEEH Q       N  G V+ ESMS            +        N   S I     LKARA+LVDME+GPVAET+ GPLG LFD  Q +TDVSG+GNN+AHGH  YG +Y + + + +R A E+CDSLQSFF+MHS+GGGTGSGLGTYILGLLED +PNV+RF T VFPSEDDDVVTSPYNSMLAL +LT HADCVLP+EN+ L+DL ++                                                                              +++  F+ MN++VAR+L +LT+SMRF G LNVDLN+ITTNLVPFP+LH+L+ S+S  P+  +S P                       L  + S  F + +QL+R++PR    LA  L  RG G+ ++DI  N++++Q ++RM+ WN +GFK+G+C  P                 LSNN C+  TF+R+  RF +LY R+A VHHY EYMD + ++EA+E++  +I  Y  LE
Sbjct:    1 MPRELITLQVGQCGNQIGRQFWQLALEEHAQ-------NCKGSVFDESMS---SFFRNVDSRFSPPVDMPFNDGQSLIKS---LKARAILVDMEQGPVAETMIGPLGELFDQQQLVTDVSGSGNNWAHGHCLYGPKYKEQLEDKLRCAVELCDSLQSFFVMHSMGGGTGSGLGTYILGLLEDLYPNVYRFATVVFPSEDDDVVTSPYNSMLALNELTQHADCVLPIENEALIDLCAKIGRGMSSVARMNTLSTGDNLSTRVINGSRLNDSIDMSKLEHFYKKGKGSSTLSTRQVRKKKVMIRPD----------TQKKSAFEEMNNVVARLLTNLTSSMRFPGSLNVDLNDITTNLVPFPKLHFLLASMS--PAFDTSDPR-----------------QQPRRLFQMFSDAFQKDHQLIRANPRASVYLACGLFMRG-GVEISDINANIQRLQSELRMIHWNQEGFKVGICRVPPVGQ-------KSSLLCLSNNCCIRETFQRLNTRFQKLYSRRAHVHHYTEYMDIAKLDEAQENVMYLIGEYSKLE 499          
BLAST of NO16G00850 vs. NCBI_GenBank
Match: XP_002997082.1 (tubulin/FtsZ family protein, putative [Phytophthora infestans T30-4] >EEY70148.1 tubulin/FtsZ family protein, putative [Phytophthora infestans T30-4])

HSP 1 Score: 414.5 bits (1064), Expect = 5.400e-112
Identity = 239/549 (43.53%), Postives = 313/549 (57.01%), Query Frame = 0
Query:    1 MPREVITLQVGQAGNQIGRRFWEQALEEHCQPTEDKDANEGGIVYTESMSXXXXXXXXXXDEYQLGSRKTTNCRHSSIVKRGRLKARAVLVDMEEGPVAETLRGPLGPLFDSHQYLTDVSGAGNNFAHGHYAYGAQYGDNVMEAVRGAAEMCDSLQSFFLMHSLGGGTGSGLGTYILGLLEDEFPNVHRFTTTVFPSEDDDVVTSPYNSMLALQQLTAHADCVLPVENQCLMDLNSQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVTGPTLAMRRECGFDGMNDIVARVLLDLTASMRFGGDLNVDLNEITTNLVPFPRLHYLMTSLSLYPSAISSSPHIGNHEWAPLGGSSAAHAAASLHLRTICSAVFSRPNQLLRSDPRRGTVLASALLFRGRGLSLADITENVKKIQKDIRMVSWNPDGFKIGLCGTPSSSSFXXXXXXXXXXXSLSNNSCVATTFERMALRFDRLYRRKAMVHHYAEYMDASLMEEAREDLCQVIDGYRALE 550
            MPRE+ITLQVGQ GNQIGR+FW+ ALEEH Q  +  +       + ESMS          D               S +K   LKARA+LVDME+GPV ET+ GPLG LFD  Q LTDVSG+GNN+AHGH  YG +Y + + + +  AAE+CDSLQSFF+MHS+GGGTGSGLGT+ILGLLED++P+V+RF T VFPSEDDD+VTSPYNSMLAL++LT HADCVLP+EN+ LMDL ++                                                                      VT  + A ++   F  MN+ VAR+L +LT+SMRF G LNVDLNEITTNLVPFP+LH+L++S+S  P   +S P                       L  + +  F + +QL+R++PR    LA  LL RG  + ++DI  N++++  ++RM+ WN +GFK+G+C  P                 LSNN C+  TFER+  RF +LY RKA VHHY E+MDA ++ EA+E+   +I  Y  LE
Sbjct:    1 MPRELITLQVGQCGNQIGRQFWQLALEEHAQNCKRAE-------FDESMS----TFFRNVDSRFWPPVDLPFIDGQSPIK--SLKARAILVDMEQGPVTETIAGPLGELFDQQQLLTDVSGSGNNWAHGHCLYGPKYREQLEDKLHRAAELCDSLQSFFVMHSMGGGTGSGLGTFILGLLEDQYPDVYRFATVVFPSEDDDIVTSPYNSMLALRELTEHADCVLPIENEALMDLCAK------------IDRGALSTGTFSTDEKQFTRLVDGSCLTGCVDLSELEYLYKRGKRPSTTSTKQNKRKGVTARSSAQKKTHVFGEMNNTVARLLTNLTSSMRFEGSLNVDLNEITTNLVPFPKLHFLLSSMS--PVFATSDPR-----------------QQPRRLNQMFTEAFQKDHQLIRANPRASVYLACGLLMRG-NVEVSDINSNIQRLHSEVRMIHWNQEGFKVGVCSVPPVGQ-------RLSLLCLSNNCCIRETFERLNTRFHKLYSRKAHVHHYTEFMDAGMLNEAQENARFLIGEYAKLE 497          
BLAST of NO16G00850 vs. NCBI_GenBank
Match: XP_008607507.1 (hypothetical protein SDRG_03648 [Saprolegnia diclina VS20] >EQC39446.1 hypothetical protein SDRG_03648 [Saprolegnia diclina VS20])

HSP 1 Score: 410.2 bits (1053), Expect = 1.000e-110
Identity = 244/550 (44.36%), Postives = 312/550 (56.73%), Query Frame = 0
Query:    1 MPREVITLQVGQAGNQIGRRFWEQALEEHCQPTEDKDANEGGIVYTESMSXXXXXXXXXXDEYQLGSRKTTNCRHSSIVKRGRLKARAVLVDMEEGPVAETLRGPLGPLFDSHQYLTDVSGAGNNFAHGHYAYGAQYGDNVMEAVRGAAEMCDSLQSFFLMHSLGGGTGSGLGTYILGLLEDEFPNVHRFTTTVFPSEDDDVVTSPYNSMLALQQLTAHADCVLPVENQCLM-DLNSQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVTGPTLAMRRECGFDGMNDIVARVLLDLTASMRFGGDLNVDLNEITTNLVPFPRLHYLMTSLSLYPSAISSSPHIGNHEWAPLGGSSAAHAAASLHLRTICSAVFSRPNQLLRSDPR-RGTVLASALLFRGRGLSLADITENVKKIQKDIRMVSWNPDGFKIGLCGTPSSSSFXXXXXXXXXXXSLSNNSCVATTFERMALRFDRLYRRKAMVHHYAEYMDASLMEEAREDLCQVIDGYRAL 549
            MPRE+IT+QVGQ GNQIGR+FW+ AL+EH +    KDA      + +SMS           +     R          +K   L+ARA+L+DMEEGPV ETL GPLG LFDS Q+LTDVSG+GNN+AHG+  YG QY + + E ++ A E+CDSLQSFF++HS+GGGTGSGLGTYIL LLED +P  +RFTT +FPSEDDDV+TSPYNSMLAL QLT HADCVLP+EN+ L   + +QS                                                                           A      FD MN IVARVL  LT+SMRF G LNVDLNEITTNLVPFP+LHYL++SLS                  PL   S A+   +  LR + + +F   NQL+ + PR  G +LA  LLFRG  + ++D+  +++K++ ++R++ WN DGFKIGLC  PS  S            +LSN+ C+  TFERM  RF +LY+RKA +HHY EYMD ++ +EA E    +I  Y  L
Sbjct:    1 MPRELITIQVGQCGNQIGRQFWKMALDEHAK--HAKDAR-----FDDSMSTFFRNVDSHGGDLPPHER----------IK--GLRARALLIDMEEGPVTETLHGPLGELFDSSQFLTDVSGSGNNWAHGYALYGPQYKEQLFEKLQHATELCDSLQSFFVLHSMGGGTGSGLGTYILSLLEDHYPEAYRFTTAIFPSEDDDVITSPYNSMLALHQLTEHADCVLPIENEALFAKVPAQS---------------------------------------------------------------------------ASSSSSSFDAMNRIVARVLTHLTSSMRFEGSLNVDLNEITTNLVPFPKLHYLLSSLS------------------PLQSKSPAY--QTHRLRHLFTDIFHAQNQLIMTSPRTHGVMLACGLLFRG-NVQVSDVQSHLEKLKAEMRLIYWNRDGFKIGLCNVPSLES----VKGSPSVLALSNHGCIVETFERMQTRFLKLYKRKAHIHHYLEYMDHAMFDEALESNKWLIAEYTKL 431          
The following BLAST results are available for this feature:
BLAST of NO16G00850 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005854276.19.100e-16063.41epsilon tubulin [Nannochloropsis gaditana CCMP526]... [more]
EWM24048.19.100e-16063.41epsilon 1 [Nannochloropsis gaditana][more]
XP_008868497.16.600e-11844.44hypothetical protein H310_05537 [Aphanomyces invad... [more]
XP_009835821.19.500e-11744.34hypothetical protein H257_10834, partial [Aphanomy... [more]
OWZ16528.13.100e-11544.27Tubulin/FtsZ family protein [Phytophthora megakary... [more]
XP_008916011.12.900e-11343.01hypothetical protein PPTG_19363 [Phytophthora para... [more]
XP_009525802.14.900e-11343.45hypothetical protein PHYSODRAFT_500449 [Phytophtho... [more]
XP_024573753.14.900e-11343.72tubulin family [Plasmopara halstedii] >CEG37384.1 ... [more]
XP_002997082.15.400e-11243.53tubulin/FtsZ family protein, putative [Phytophthor... [more]
XP_008607507.11.000e-11044.36hypothetical protein SDRG_03648 [Saprolegnia dicli... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL150nonsL150Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003070NSK003070Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G00850.1NO16G00850.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G00850.1NO16G00850.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G00850 ID=NO16G00850|Name=NO16G00850|organism=Nannochloropsis oceanica|type=gene|length=1686bp
ATGCCTCGGGAGGTTATCACGCTCCAAGTGGGCCAGGCTGGAAACCAGAT
CGGGAGGCGCTTTTGGGAGCAAGCCCTCGAGGAACATTGCCAACCCACCG
AAGACAAGGACGCGAATGAGGGAGGGATCGTCTATACCGAGAGCATGTCT
TCATTTTTCCACCACCACGACGAGGAGCACGACGAGTATCAGCTCGGCAG
CCGTAAAACTACGAATTGTCGGCACAGCAGTATCGTCAAGCGCGGTCGAC
TGAAAGCACGCGCCGTGCTTGTCGACATGGAAGAAGGCCCCGTCGCAGAA
ACTTTGCGTGGACCTTTAGGCCCCCTCTTTGACAGCCACCAGTACCTCAC
GGACGTGTCTGGGGCTGGCAACAATTTTGCCCACGGCCATTATGCCTACG
GAGCTCAATACGGGGACAATGTCATGGAAGCGGTGCGGGGCGCGGCGGAG
ATGTGTGATTCACTCCAATCATTTTTCCTGATGCATTCCTTGGGTGGCGG
GACGGGCTCGGGTCTCGGCACGTATATCTTGGGTTTGTTGGAAGACGAGT
TTCCGAACGTACATCGTTTTACCACAACTGTGTTTCCCTCGGAGGATGAT
GATGTGGTCACTTCTCCGTACAATAGCATGTTGGCGCTGCAGCAGCTGAC
GGCCCATGCCGATTGTGTTTTGCCCGTGGAGAATCAGTGCTTGATGGACT
TGAATTCTCAATCTTCTTCTTCGGCCGTGGCGGGTGTCAAAATAGTGCAA
CCAAGACAGCAGCGTTCATCGATGCACCAACTCTTGTCCCCACCATCACC
ACCGGCAGCAGCACCATTAGCGCCAGCCCGGGGTAGACAAGGCAGATATC
GTCCCGTGTCGGCCGGTGCAGCTGCAGCGGCAGCAGCAGCAGCAGCAACC
TCAGCAGTAGTAGCAGCAGACGTGACAGGCCCGACTCTAGCAATGCGACG
GGAGTGTGGTTTTGACGGGATGAACGACATCGTCGCTCGAGTCTTGCTTG
ACCTTACGGCATCCATGCGTTTCGGGGGCGACCTGAACGTGGATCTAAAC
GAGATCACCACCAACCTCGTCCCCTTCCCTCGACTGCACTACCTCATGAC
TTCCCTCAGTCTCTACCCCTCCGCCATCTCTTCATCTCCTCATATCGGCA
ACCACGAATGGGCACCCTTAGGAGGGAGTAGTGCTGCCCATGCCGCCGCC
TCACTCCATCTCCGTACAATATGCTCCGCCGTCTTTTCCCGTCCAAATCA
ACTTTTGCGTTCCGACCCTCGTCGAGGCACCGTCCTTGCCTCCGCCCTTC
TCTTCCGTGGACGGGGCCTCTCCCTGGCCGATATCACTGAGAATGTCAAA
AAAATACAGAAAGACATTCGTATGGTCTCGTGGAACCCAGACGGCTTCAA
AATTGGGTTGTGCGGAACCCCTTCCTCGTCCTCCTTCCCTTCCTCGTCCT
CATCGTCGGCCTCGGTGTTATCGCTGTCGAATAACAGTTGCGTGGCCACG
ACATTTGAGAGGATGGCATTAAGGTTCGATCGGCTGTACAGGAGAAAGGC
GATGGTTCACCATTACGCAGAATACATGGATGCGAGTCTCATGGAGGAAG
CGAGGGAGGACTTGTGTCAGGTTATAGACGGGTATCGGGCCTTGGAAGCT
GGGAGGGTGACCAAGACGAAGTGGAAGACAAAGTAG
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protein sequence of NO16G00850.1

>NO16G00850.1-protein ID=NO16G00850.1-protein|Name=NO16G00850.1|organism=Nannochloropsis oceanica|type=polypeptide|length=562bp
MPREVITLQVGQAGNQIGRRFWEQALEEHCQPTEDKDANEGGIVYTESMS
SFFHHHDEEHDEYQLGSRKTTNCRHSSIVKRGRLKARAVLVDMEEGPVAE
TLRGPLGPLFDSHQYLTDVSGAGNNFAHGHYAYGAQYGDNVMEAVRGAAE
MCDSLQSFFLMHSLGGGTGSGLGTYILGLLEDEFPNVHRFTTTVFPSEDD
DVVTSPYNSMLALQQLTAHADCVLPVENQCLMDLNSQSSSSAVAGVKIVQ
PRQQRSSMHQLLSPPSPPAAAPLAPARGRQGRYRPVSAGAAAAAAAAAAT
SAVVAADVTGPTLAMRRECGFDGMNDIVARVLLDLTASMRFGGDLNVDLN
EITTNLVPFPRLHYLMTSLSLYPSAISSSPHIGNHEWAPLGGSSAAHAAA
SLHLRTICSAVFSRPNQLLRSDPRRGTVLASALLFRGRGLSLADITENVK
KIQKDIRMVSWNPDGFKIGLCGTPSSSSFPSSSSSSASVLSLSNNSCVAT
TFERMALRFDRLYRRKAMVHHYAEYMDASLMEEAREDLCQVIDGYRALEA
GRVTKTKWKTK*
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Synonyms
Publications