NO16G00830, NO16G00830 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G00830 vs. NCBI_GenBank
Match: XP_005854277.1 (hypothetical protein NGA_0208300 [Nannochloropsis gaditana CCMP526] >EKU22082.1 hypothetical protein NGA_0208300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 447.6 bits (1150), Expect = 3.300e-122 Identity = 221/303 (72.94%), Postives = 243/303 (80.20%), Query Frame = 0 Query: 21 VPLEVRAHVGEIGRHYKALSKRHIFCLTLLAAASIWLENDDWGLLLKKACLALFISSFADYLIRPSPLLDDVTVRLQNHDIIRPYCDKLVWSSYVYGLAGLYSLYLGQYAFGTLQLVTCCGSTLYHLRKEAVFFNFDNTFASSLLLLTLYAGGLSIHVQDWAHLVATILGLPIAVFLIIFCGMPASLAREPGHGTGARGAVGSGTGCLPCSEAARSGPDLGRPGFRLCAGAQYDDWHTAWHVVSGAGTVVTASFFQHHWPGLQCGGPNFGGGFPHLPVVPTACVVLALGMNMVGNMAGIMPVC 324 VP+EVR HVGE+GRHY+ALSKRH+ CL+LLAAA I+LENDD LLLKKACLALFISS+ADY I+PSPLLDDVTVRL D+IRP DKLVWSS VYG+AG+YSLYLGQYAFGTLQ+VTC GS+LYH+RKEAVFFNFDNTFASSLL LTLYAG ++IHVQDW H AT++GLPIAVFLI+FCGMPASLARE HG PGFR CAG QYDDWHTAWH VSGAGTVVTA FFQ HWPGLQCGG NF G PHLPVVPTACV LAL +N+VGN AG+MPVC Sbjct: 37 VPVEVREHVGELGRHYRALSKRHVSCLSLLAAALIFLENDDVSLLLKKACLALFISSYADYFIKPSPLLDDVTVRLHVDDLIRPVSDKLVWSSCVYGIAGVYSLYLGQYAFGTLQIVTCAGSSLYHIRKEAVFFNFDNTFASSLLFLTLYAGCMAIHVQDWTHCFATVVGLPIAVFLIVFCGMPASLAREHRHG----------------------------PGFRQCAGRQYDDWHTAWHFVSGAGTVVTAHFFQKHWPGLQCGGSNF-GVLPHLPVVPTACVALALSLNIVGNWAGVMPVC 310
BLAST of NO16G00830 vs. NCBI_GenBank
Match: EWM24045.1 (hypothetical protein Naga_100280g9 [Nannochloropsis gaditana]) HSP 1 Score: 446.0 bits (1146), Expect = 9.600e-122 Identity = 220/303 (72.61%), Postives = 242/303 (79.87%), Query Frame = 0 Query: 21 VPLEVRAHVGEIGRHYKALSKRHIFCLTLLAAASIWLENDDWGLLLKKACLALFISSFADYLIRPSPLLDDVTVRLQNHDIIRPYCDKLVWSSYVYGLAGLYSLYLGQYAFGTLQLVTCCGSTLYHLRKEAVFFNFDNTFASSLLLLTLYAGGLSIHVQDWAHLVATILGLPIAVFLIIFCGMPASLAREPGHGTGARGAVGSGTGCLPCSEAARSGPDLGRPGFRLCAGAQYDDWHTAWHVVSGAGTVVTASFFQHHWPGLQCGGPNFGGGFPHLPVVPTACVVLALGMNMVGNMAGIMPVC 324 VP+EVR HVGE+GRHY+ALSKRH+ CL+LLAAA I+LENDD LLLKKACLALFISS+ADY I+PSPLLDDVTVRL D+IRP DKLVWSS VYG+AG+YSLYLGQYAFGTLQ+VTC GS+LYH+RKEAVFFNFDNTFASSLL LTLYAG ++IHVQDW H AT++GLPIAVFLI+FCGMPASLARE HG PGFR CAG QYDDWHTAWH VSGAGTVVTA FFQ HWPGLQCGG NF G PHLPVVPTACV AL +N+VGN AG+MPVC Sbjct: 37 VPVEVREHVGELGRHYRALSKRHVSCLSLLAAALIFLENDDVSLLLKKACLALFISSYADYFIKPSPLLDDVTVRLHVDDLIRPVSDKLVWSSCVYGIAGVYSLYLGQYAFGTLQIVTCAGSSLYHIRKEAVFFNFDNTFASSLLFLTLYAGCMAIHVQDWTHCFATVVGLPIAVFLIVFCGMPASLAREHRHG----------------------------PGFRQCAGRQYDDWHTAWHFVSGAGTVVTAHFFQKHWPGLQCGGSNF-GVLPHLPVVPTACVAFALSLNIVGNWAGVMPVC 310
BLAST of NO16G00830 vs. NCBI_GenBank
Match: CBJ26889.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 150.6 bits (379), Expect = 8.400e-33 Identity = 90/227 (39.65%), Postives = 122/227 (53.74%), Query Frame = 0 Query: 96 LQNHDIIRPYCDKLVWSSYVYGLAGLYSLYLGQYAFGTLQLVTCCGSTLYHLRKEAVFFNFDNTFASSLLLLTLYAGGLSIHVQDWAHLVATILGLPIAVFLIIFCGMPASLAREPGHGTGARGAVGSGTGCLPCSEAARSGPDLGRPGFRLCAGAQYDDWHTAWHVVSGAGTVVTASFFQHHWPGLQCGGPNFGGGFPHLPVVPTACVVLALGMNMVGNMAGIMPV 323 L+ D RP D LVW+S+VY L +Y LY QY LQL+T GSTL+HL +E FFN DN FA+SLL T ++ L + W ++V LG P A+F I+ CGMP + R P GSG RS P +YD +H WH+ SG GT++T FF+ ++P + GG F FP +PVVPT + L+ +N+ GN G+MP+ Sbjct: 180 LETGDKRRPLTDMLVWTSFVYCLPSVYGLYAHQYGIAGLQLMTTIGSTLFHLTRETKFFNLDNVFATSLLSTTAWSLYLGVTHGVWWYVVVIGLGGPFAIFCIVRCGMPGLVCRHP---------AGSGL-------CRRSNP-------------EYDFFHMLWHLSSGLGTLITIHFFEVYFPAEEAGGGWF-YFFPDVPVVPTVALALSALINLYGNRVGVMPL 376
BLAST of NO16G00830 vs. NCBI_GenBank
Match: GAY06268.1 (Hypothetical protein PINS_014071 [Pythium insidiosum] >GAX98779.1 Hypothetical protein PINS_006598 [Pythium insidiosum]) HSP 1 Score: 69.7 bits (169), Expect = 1.900e-8 Identity = 51/198 (25.76%), Postives = 78/198 (39.39%), Query Frame = 0 Query: 87 PLLDDVTVRL----QNHDIIRPYCDKLVWSSYVYGLAGLYSLYLGQYAFGTLQLVTCCGSTLYHLRKEAVFFNFDNTFASSLLLLTLYAGGLSIHVQDWAHLVATILGLPIAVFLIIFCGMPASLAREPGHGTGARGAVGSGTGCLPCSEAARSGPDLGRPGFRLCAGAQYDDWHTAWHVVSGAGTVVTASFFQHHWP 281 P+ D+ +R H R + D L++S+ VY LAGL SL GQY Q+ ST++H KE F D +S+L ++ ++ ++ + + L + + VF I+CG+P GA+YD WH WH VSG T+ T F + P Sbjct: 29 PVTDERPIRKMKAHHRHHHRREWRDGLMFSNLVYVLAGLISLSCGQYFCALFQMGAAVASTMFHRSKETRFLLVDAIISSTLAVVFIFFAAHTLRNEWYGILSIKVAQGALCVFTWIYCGLP--------------------------------------------GGARYDKWHARWHYVSGVTTITTTCFLAMYLP 182 The following BLAST results are available for this feature:
BLAST of NO16G00830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 4
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G00830 ID=NO16G00830|Name=NO16G00830|organism=Nannochloropsis oceanica|type=gene|length=1680bpback to top protein sequence of NO16G00830.1 >NO16G00830.1-protein ID=NO16G00830.1-protein|Name=NO16G00830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=324bpback to top Synonyms
Publications
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