NO16G00780, NO16G00780 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G00780 vs. NCBI_GenBank
Match: XP_005854275.1 (protein atypical group [Nannochloropsis gaditana CCMP526] >EKU22080.1 protein atypical group [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 391.0 bits (1003), Expect = 3.000e-105 Identity = 193/227 (85.02%), Postives = 215/227 (94.71%), Query Frame = 0 Query: 29 FVKAELARKKQEYDAQLKARISASVAGTNPADSVPPLDSLPYIPYLDETGKISDSGADAKVKASVYAVYDESGTVKYIGVSRSVAQSLRLNLARQPEQTYGFRVFHITKPSRVLLEITRDTWIAQLGYQPEGNDNGPKQQLWEGAMDVKPLMNDADNAAMESARIKRRSEENAMKKVTRRFEEAKITVLNARGVTESLRFDPKLKGKGLLDLFLDKQADTAVPDSKP 256 FVKAELARKKQEYDA LKARISASVA + ADS+PPLDSLPY+PYLDETGKI+D GADAKVKASVYA+YDES TV+YIGVSRSV QSLRL+LAR PEQTYGFRV+HI+KP+RVLLEITRDTW+ QLGYQP+GNDNGP QQLWE A+DVKPLMN+AD+AA+E+ARIK+RSEENAMKKVTRRFEEAKI+VLNARGVTESLRFDPKLKGKGLLDL+L+KQ D+AVPDSKP Sbjct: 57 FVKAELARKKQEYDASLKARISASVANADVADSIPPLDSLPYVPYLDETGKINDCGADAKVKASVYALYDESETVRYIGVSRSVTQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDLYLEKQPDSAVPDSKP 283
BLAST of NO16G00780 vs. NCBI_GenBank
Match: EWM24050.1 (hypothetical protein Naga_100280g2 [Nannochloropsis gaditana]) HSP 1 Score: 391.0 bits (1003), Expect = 3.000e-105 Identity = 193/227 (85.02%), Postives = 215/227 (94.71%), Query Frame = 0 Query: 29 FVKAELARKKQEYDAQLKARISASVAGTNPADSVPPLDSLPYIPYLDETGKISDSGADAKVKASVYAVYDESGTVKYIGVSRSVAQSLRLNLARQPEQTYGFRVFHITKPSRVLLEITRDTWIAQLGYQPEGNDNGPKQQLWEGAMDVKPLMNDADNAAMESARIKRRSEENAMKKVTRRFEEAKITVLNARGVTESLRFDPKLKGKGLLDLFLDKQADTAVPDSKP 256 FVKAELARKKQEYDA LKARISASVA + ADS+PPLDSLPY+PYLDETGKI+D GADAKVKASVYA+YDES TV+YIGVSRSV QSLRL+LAR PEQTYGFRV+HI+KP+RVLLEITRDTW+ QLGYQP+GNDNGP QQLWE A+DVKPLMN+AD+AA+E+ARIK+RSEENAMKKVTRRFEEAKI+VLNARGVTESLRFDPKLKGKGLLDL+L+KQ D+AVPDSKP Sbjct: 83 FVKAELARKKQEYDASLKARISASVANADVADSIPPLDSLPYVPYLDETGKINDCGADAKVKASVYALYDESETVRYIGVSRSVTQSLRLHLARMPEQTYGFRVYHISKPTRVLLEITRDTWVDQLGYQPQGNDNGPNQQLWESALDVKPLMNEADHAALETARIKQRSEENAMKKVTRRFEEAKISVLNARGVTESLRFDPKLKGKGLLDLYLEKQPDSAVPDSKP 309
BLAST of NO16G00780 vs. NCBI_GenBank
Match: CBJ33337.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 191.8 bits (486), Expect = 2.600e-45 Identity = 109/226 (48.23%), Postives = 153/226 (67.70%), Query Frame = 0 Query: 29 FVKAELARKKQEYDAQLKARISASV--AGTNPADSVPPLDSLPYIPYLDETGKISDSGADAK-VKASVYAVYDESGTVKYIGVSRSVAQSLRLNLARQPEQTYGFRVFHITKPSRVLLEITRDTWIAQLGYQPEGNDNGPKQQLWEGAMDVKPLMNDADNAAMESARIKRRSEENAMKKVTRRFEEAKITVLNARGVTESLRFDPKLKGKGLLDLFLDKQADTAVP 252 +VKAELAR ++EY+A KA+I A +V PL L + +LD+ GK+ + D K VKASVYAVYDES T++YIGVSR + QSLRL+LAR+P+ TY F+V +IT+PSR LLEI +++WI + G P+GN + Q +WE A++V PL + D A + + K + E+ +KK+ RFE + +L RGV ES+RFDPKLKG+GLLD+ + K D++VP Sbjct: 70 YVKAELARVQEEYEANRKAKIKEQTRQAAARGDAAVTPLADLEFHSFLDKDGKV--ASIDTKGVKASVYAVYDESKTLRYIGVSRGIQQSLRLSLARRPKDTYYFKVQNITRPSRSLLEIIKESWIEENGSTPDGNADEASQAVWEHAINVVPLFTEEDLAVVAEWKEKGK-EDRGLKKIAGRFENEILEILEERGVKESIRFDPKLKGRGLLDVKMPK-PDSSVP 291
BLAST of NO16G00780 vs. NCBI_GenBank
Match: GAQ89125.1 (hypothetical protein KFL_004890080 [Klebsormidium nitens]) HSP 1 Score: 178.7 bits (452), Expect = 2.300e-41 Identity = 108/229 (47.16%), Postives = 140/229 (61.14%), Query Frame = 0 Query: 31 KAELARKKQEYDAQLKARISASVAGTNPADSVPPLDSLPYIPYLDETGKISDSGADAKVKASVYAVYDESGTVKYIGVSRSVAQSLRLNLARQPEQTYGFRVFHITKPSRVLLEITRDTWIAQLGYQPEGNDNGPKQQLWEGAMDVKPLMNDADNAAMESARIKRRSEENAMKKVTRRFEEAKITVLNARGVTESLRFDPKLKGKGLLDLFLD-KQADTAVPDSKPKPA 259 +A A K EY+ + + +A AG A V PL LP +P+L E GKI+D + A KASVYA++DE V+++G+SR++ SLRL+ AR P Q + +V HI P R LE RD WIA+LGY+P GNDNGP+Q WE +DV+PLM D + AA+E A A+K+V RR E AR TESLRFDPKLK KG+LD+ DT VP+ KPK A Sbjct: 91 RAATAAAKAEYE---RRQAAARRAGRGAA-PVTPLAELPLVPFLTEEGKIADC-SQADAKASVYAIFDEEKVVRHVGISRAIGPSLRLHFARVPLQCWAVKVQHIKAPRRSALEAIRDAWIAELGYRPTGNDNGPEQNRWENPLDVRPLMTDDEKAAVEEA-APGPPTAKALKQVARRVEAELKASYAARQSTESLRFDPKLKEKGMLDVKNPAPPPDTKVPE-KPKQA 312
BLAST of NO16G00780 vs. NCBI_GenBank
Match: CEM28487.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 173.3 bits (438), Expect = 9.700e-40 Identity = 97/230 (42.17%), Postives = 137/230 (59.57%), Query Frame = 0 Query: 29 FVKAELARKKQEYDAQLKARISASVAGTNPAD--SVPPLDSLPYIPYLDETGKISDSGADAKVKASVYAVYDESGTVKYIGVSRSVAQSLRLNLARQPEQTYGFRVFHITKPSRVLLEITRDTWIAQLGYQPEGNDNGPKQQLWEGAMDVKPLMNDADNAAMESARIKRRSEENAMKKVTRRFEEAKITVLNARGVTESLRFDPKLKGKGLLDLFLDKQADTAVPDSKPK 257 + K +L K+ Y +L+ R+ A + S+P L SLP +PYL GK++ + VKASVYA+YDE T++++GV+RS+ QSL L+LAR P+ T+ +V HI +P+R LLE+ + +W+ + G P GN P Q+LWE +D+KPLM D D K + N +V RR+E K VL AR VTE +RFDPKLK +GL DL + K D VP P+ Sbjct: 8 YTKQQLKEKESRYHHELQQRLKAETDRLRASGDVSIPSLSSLPLMPYLTPDGKVTSADVTPGVKASVYAIYDEGKTLQHVGVTRSIRQSLLLHLARMPQLTHYVKVHHILRPNRSLLELIKQSWLDESGNIPPGN-RPPDQELWEHPLDIKPLMTDEDRERYAEKEQKGKG-FNVYLEVARRYEAEKKEVLEARHVTEEVRFDPKLKRQGLSDLLIPKPKD-EVPTGAPR 234
BLAST of NO16G00780 vs. NCBI_GenBank
Match: XP_024383616.1 (uncharacterized protein LOC112286182 isoform X1 [Physcomitrella patens] >XP_024383617.1 uncharacterized protein LOC112286182 isoform X1 [Physcomitrella patens] >XP_024383618.1 uncharacterized protein LOC112286182 isoform X1 [Physcomitrella patens] >XP_024383619.1 uncharacterized protein LOC112286182 isoform X1 [Physcomitrella patens]) HSP 1 Score: 162.9 bits (411), Expect = 1.300e-36 Identity = 97/223 (43.50%), Postives = 131/223 (58.74%), Query Frame = 0 Query: 35 ARKKQEYDAQLKARISASVAGTNPADSVPPLDSLPYIPYLDETGKISDSGADAKVKASVYAVYDESGTVKYIGVSRSVAQSLRLNLARQPEQTYGFRVFHITKPSRVLLEITRDTWIAQLGYQPEGNDNGPKQQLWEGAMDVKPLMNDADNAAMESARIKRRSEENAMKKVTRRFEEAKITVLNARGVTESLRFDPKLKGKGLLDL-FLDKQADTAVPDSKPK 257 A+ ++EY + A S+ G L SL YIPYL E G I+D + KAS+YA++DE+ T+ +IG+SR V QS+RL+ AR+P Q Y +V H++KPSR LLE TRD WI++ G P GNDNG Q LWE A+D P M D + E A + +K V RR E+ + R T+ LRFDPKLK + LLDL + + DT+VP + PK Sbjct: 89 AQAQEEYRKRQDALRRQSMQGGEGVS----LSSLEYIPYLTEEGHIADC-TEPGAKASLYAIFDENKTLCFIGISRQVYQSMRLHFARRPLQCYYVKVMHVSKPSRALLEGTRDAWISENGSVPVGNDNGEIQNLWENALDCTPFMTDEEKLLHEEA-APGPPKAKVLKNVARRIEKDLEGIFKQRNCTDVLRFDPKLKDRCLLDLKGVAVKPDTSVPTATPK 305
BLAST of NO16G00780 vs. NCBI_GenBank
Match: XP_024383620.1 (uncharacterized protein LOC112286182 isoform X2 [Physcomitrella patens] >PNR49717.1 hypothetical protein PHYPA_011613 [Physcomitrella patens]) HSP 1 Score: 162.9 bits (411), Expect = 1.300e-36 Identity = 97/223 (43.50%), Postives = 131/223 (58.74%), Query Frame = 0 Query: 35 ARKKQEYDAQLKARISASVAGTNPADSVPPLDSLPYIPYLDETGKISDSGADAKVKASVYAVYDESGTVKYIGVSRSVAQSLRLNLARQPEQTYGFRVFHITKPSRVLLEITRDTWIAQLGYQPEGNDNGPKQQLWEGAMDVKPLMNDADNAAMESARIKRRSEENAMKKVTRRFEEAKITVLNARGVTESLRFDPKLKGKGLLDL-FLDKQADTAVPDSKPK 257 A+ ++EY + A S+ G L SL YIPYL E G I+D + KAS+YA++DE+ T+ +IG+SR V QS+RL+ AR+P Q Y +V H++KPSR LLE TRD WI++ G P GNDNG Q LWE A+D P M D + E A + +K V RR E+ + R T+ LRFDPKLK + LLDL + + DT+VP + PK Sbjct: 38 AQAQEEYRKRQDALRRQSMQGGEGVS----LSSLEYIPYLTEEGHIADC-TEPGAKASLYAIFDENKTLCFIGISRQVYQSMRLHFARRPLQCYYVKVMHVSKPSRALLEGTRDAWISENGSVPVGNDNGEIQNLWENALDCTPFMTDEEKLLHEEA-APGPPKAKVLKNVARRIEKDLEGIFKQRNCTDVLRFDPKLKDRCLLDLKGVAVKPDTSVPTATPK 254
BLAST of NO16G00780 vs. NCBI_GenBank
Match: XP_024526657.1 (uncharacterized protein LOC112345017 [Selaginella moellendorffii] >XP_024543784.1 uncharacterized protein LOC112350950 [Selaginella moellendorffii]) HSP 1 Score: 162.5 bits (410), Expect = 1.700e-36 Identity = 90/228 (39.47%), Postives = 138/228 (60.53%), Query Frame = 0 Query: 30 VKAELARKKQEYDAQLKARISASVAGTNPADSVPPLDSLPYIPYLDETGKISDSGADAKVKASVYAVYDESGTVKYIGVSRSVAQSLRLNLARQPEQTYGFRVFHITKPSRVLLEITRDTWIAQLGYQPEGNDNGPKQQLWEGAMDVKPLMNDADNAAMESARIKRRSEENAMKKVTRRFEEAKITVLNARGVTESLRFDPKLKGKGLLDLFLD-KQADTAVPDSKPK 257 +K E + ++EY + +A + S L+ L ++PYL E G I D + A KASVYAV+DE+ + YIG+SR + S+RL+ AR P++ Y +V+H+TKPSR +LE+TR+ W+A+ P GN + +Q +WE +D KPLM D + E A + + +K V RR E++ + ++R E+LRFDPKLK +GLLDL + K+ DT++P +K K Sbjct: 48 IKRETLQAQEEYKRRQLQTQGRELASSKELVS---LEDLEFLPYLTEDGMILDC-SQADAKASVYAVFDENKVINYIGISRQIHPSMRLHFARVPQKCYFVKVYHVTKPSRSILELTRNKWMAESPVPPPGNTDSEQQNIWENPLDCKPLMTDEEIKLHEEAG-QGPPKAKVLKNVARRIEKSLVASFDSRNCKETLRFDPKLKEQGLLDLKNEPKKPDTSIPSTKLK 270
BLAST of NO16G00780 vs. NCBI_GenBank
Match: OAE26517.1 (hypothetical protein AXG93_1406s1090 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 155.2 bits (391), Expect = 2.700e-34 Identity = 87/199 (43.72%), Postives = 120/199 (60.30%), Query Frame = 0 Query: 59 ADSVPPLDSLPYIPYLDETGKISDSGADAKVKASVYAVYDESGTVKYIGVSRSVAQSLRLNLARQPEQTYGFRVFHITKPSRVLLEITRDTWIAQLGYQPEGNDNGPKQQLWEGAMDVKPLMNDADNAAMESARIKRRSEENAMKKVTRRFEEAKITVLNARGVTESLRFDPKLKGKGLLDL-FLDKQADTAVPDSKPK 257 A V LDS+ Y PYL E G I+D +KASVYA++D++ T++Y+GV+R V QS+RL+ AR P + + +V H+++PSR LLE RD WIA G P GNDNG Q WE +D K M D + +E A + +K V RR E+ + R T+ LRF+PKLK +GLLDL + + D++VP S PK Sbjct: 132 AGLVEKLDSMEYTPYLTEEGLIADI-TKPDIKASVYAIFDDAKTLQYVGVTRQVYQSMRLHFARFPSKCFYVKVQHLSRPSRALLEGIRDQWIADNGSPPPGNDNGEMQNRWENPLDCKVFMTDEEMRLLEEA-APGPPKAAVLKNVARRIEKTLMAAFEERKCTDKLRFEPKLKDRGLLDLKGVVIKPDSSVPTSTPK 328
BLAST of NO16G00780 vs. NCBI_GenBank
Match: PTQ29160.1 (hypothetical protein MARPO_0147s0036 [Marchantia polymorpha]) HSP 1 Score: 155.2 bits (391), Expect = 2.700e-34 Identity = 87/199 (43.72%), Postives = 120/199 (60.30%), Query Frame = 0 Query: 59 ADSVPPLDSLPYIPYLDETGKISDSGADAKVKASVYAVYDESGTVKYIGVSRSVAQSLRLNLARQPEQTYGFRVFHITKPSRVLLEITRDTWIAQLGYQPEGNDNGPKQQLWEGAMDVKPLMNDADNAAMESARIKRRSEENAMKKVTRRFEEAKITVLNARGVTESLRFDPKLKGKGLLDL-FLDKQADTAVPDSKPK 257 A V LDS+ Y PYL E G I+D +KASVYA++D++ T++Y+GV+R V QS+RL+ AR P + + +V H+++PSR LLE RD WIA G P GNDNG Q WE +D K M D + +E A + +K V RR E+ + R T+ LRF+PKLK +GLLDL + + D++VP S PK Sbjct: 98 AGLVEKLDSMEYTPYLTEEGLIADI-TKPDIKASVYAIFDDAKTLQYVGVTRQVYQSMRLHFARFPSKCFYVKVQHLSRPSRALLEGIRDQWIADNGSPPPGNDNGEMQNRWENPLDCKVFMTDEEMRLLEEA-APGPPKAAVLKNVARRIEKTLMAAFEERKCTDKLRFEPKLKDRGLLDLKGVVIKPDSSVPTSTPK 294 The following BLAST results are available for this feature:
BLAST of NO16G00780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G00780 ID=NO16G00780|Name=NO16G00780|organism=Nannochloropsis oceanica|type=gene|length=2957bpback to top protein sequence of NO16G00780.4 >NO16G00780.4-protein ID=NO16G00780.4-protein|Name=NO16G00780.4|organism=Nannochloropsis oceanica|type=polypeptide|length=216bpback to top protein sequence of NO16G00780.3 >NO16G00780.3-protein ID=NO16G00780.3-protein|Name=NO16G00780.3|organism=Nannochloropsis oceanica|type=polypeptide|length=261bpback to top protein sequence of NO16G00780.2 >NO16G00780.2-protein ID=NO16G00780.2-protein|Name=NO16G00780.2|organism=Nannochloropsis oceanica|type=polypeptide|length=226bpback to top protein sequence of NO16G00780.1 >NO16G00780.1-protein ID=NO16G00780.1-protein|Name=NO16G00780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=289bpback to top Synonyms
Publications
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