NO16G00740, NO16G00740 (gene) Nannochloropsis oceanica

Overview
NameNO16G00740
Unique NameNO16G00740
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length996
Alignment locationchr16:246303..247298 -

Link to JBrowse

Properties
Property NameValue
DescriptionConserved uncarachetized protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:246303..247298 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004674protein serine/threonine kinase activity
GO:0005515protein binding
GO:0016301kinase activity
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR000403PI3/4_kinase_cat_dom
IPR026683TOR
IPR003152FATC
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Homology
[Close]
BLAST of NO16G00740 vs. NCBI_GenBank
Match: EWM24051.1 (conserved uncarachetized protein [Nannochloropsis gaditana])

HSP 1 Score: 214.2 bits (544), Expect = 6.300e-52
Identity = 103/122 (84.43%), Postives = 115/122 (94.26%), Query Frame = 0 
Query:  210 AKMMELHLDIGSLAASLSANKTRFSSSVAMPPHSLAHSRLDHRSARERDLVQAVGPEGMEAPAEVLNEKAIAVIRRVQDKLTGLDFDNDVALDVPEQVERLIQQATSNENLCQCFIGYCPFW 332
            ++M +LHL+IGSLAASLSANKTRFSSSV +P HSLA SRLDHRSARE++LVQAVGPEGMEAPAEVLNEKA+AVIRRVQDKLTGLDFDN+ A+DV EQVERL++QATS ENLCQCFIGYCPFW
Sbjct: 2692 SRMTDLHLEIGSLAASLSANKTRFSSSVGVPAHSLAQSRLDHRSAREKELVQAVGPEGMEAPAEVLNEKALAVIRRVQDKLTGLDFDNETAMDVAEQVERLVEQATSKENLCQCFIGYCPFW 2813
[Close]
BLAST of NO16G00740 vs. NCBI_GenBank
Match: XP_008878028.1 (hypothetical protein H310_12650 [Aphanomyces invadans] >ETV93392.1 hypothetical protein H310_12650 [Aphanomyces invadans])

HSP 1 Score: 121.7 bits (304), Expect = 4.300e-24
Identity = 66/122 (54.10%), Postives = 86/122 (70.49%), Query Frame = 0 
Query:  215 LHLDIGSLAASLSANKTRFSSSVAMPPHSLAHSRLD---HRSARERDLVQAVGPEGMEAPAEVLNEKAIAVIRRVQDKLTGLDF--DNDVALDVPEQVERLIQQATSNENLCQCFIGYCPFW 332
            +H+D+  LAAS+S +    ++  A    S++ S++D    RS RER+LV A+GPEG  AP E LNEKA+AV RRVQ KLTG DF  D+   L+V  QV+RLI QA S+ENLCQC+IG+CPFW
Sbjct: 2580 IHVDMYQLAASMSRSVAASAAVDANGHPSISSSQVDLELRRSHRERELVNALGPEGAGAPREALNEKAVAVTRRVQSKLTGRDFFDDDSEPLNVAAQVQRLITQAASHENLCQCYIGWCPFW 2701
[Close]
BLAST of NO16G00740 vs. NCBI_GenBank
Match: XP_008878036.1 (hypothetical protein, variant 1 [Aphanomyces invadans] >ETV93393.1 hypothetical protein, variant 1 [Aphanomyces invadans])

HSP 1 Score: 121.7 bits (304), Expect = 4.300e-24
Identity = 66/122 (54.10%), Postives = 86/122 (70.49%), Query Frame = 0 
Query:  215 LHLDIGSLAASLSANKTRFSSSVAMPPHSLAHSRLD---HRSARERDLVQAVGPEGMEAPAEVLNEKAIAVIRRVQDKLTGLDF--DNDVALDVPEQVERLIQQATSNENLCQCFIGYCPFW 332
            +H+D+  LAAS+S +    ++  A    S++ S++D    RS RER+LV A+GPEG  AP E LNEKA+AV RRVQ KLTG DF  D+   L+V  QV+RLI QA S+ENLCQC+IG+CPFW
Sbjct: 2563 IHVDMYQLAASMSRSVAASAAVDANGHPSISSSQVDLELRRSHRERELVNALGPEGAGAPREALNEKAVAVTRRVQSKLTGRDFFDDDSEPLNVAAQVQRLITQAASHENLCQCYIGWCPFW 2684
[Close]
BLAST of NO16G00740 vs. NCBI_GenBank
Match: XP_008878037.1 (hypothetical protein, variant 2 [Aphanomyces invadans] >ETV93394.1 hypothetical protein, variant 2 [Aphanomyces invadans])

HSP 1 Score: 121.7 bits (304), Expect = 4.300e-24
Identity = 66/122 (54.10%), Postives = 86/122 (70.49%), Query Frame = 0 
Query:  215 LHLDIGSLAASLSANKTRFSSSVAMPPHSLAHSRLD---HRSARERDLVQAVGPEGMEAPAEVLNEKAIAVIRRVQDKLTGLDF--DNDVALDVPEQVERLIQQATSNENLCQCFIGYCPFW 332
            +H+D+  LAAS+S +    ++  A    S++ S++D    RS RER+LV A+GPEG  AP E LNEKA+AV RRVQ KLTG DF  D+   L+V  QV+RLI QA S+ENLCQC+IG+CPFW
Sbjct: 2562 IHVDMYQLAASMSRSVAASAAVDANGHPSISSSQVDLELRRSHRERELVNALGPEGAGAPREALNEKAVAVTRRVQSKLTGRDFFDDDSEPLNVAAQVQRLITQAASHENLCQCYIGWCPFW 2683
[Close]
BLAST of NO16G00740 vs. NCBI_GenBank
Match: XP_008878038.1 (hypothetical protein, variant 3 [Aphanomyces invadans] >ETV93395.1 hypothetical protein, variant 3 [Aphanomyces invadans])

HSP 1 Score: 121.7 bits (304), Expect = 4.300e-24
Identity = 66/122 (54.10%), Postives = 86/122 (70.49%), Query Frame = 0 
Query:  215 LHLDIGSLAASLSANKTRFSSSVAMPPHSLAHSRLD---HRSARERDLVQAVGPEGMEAPAEVLNEKAIAVIRRVQDKLTGLDF--DNDVALDVPEQVERLIQQATSNENLCQCFIGYCPFW 332
            +H+D+  LAAS+S +    ++  A    S++ S++D    RS RER+LV A+GPEG  AP E LNEKA+AV RRVQ KLTG DF  D+   L+V  QV+RLI QA S+ENLCQC+IG+CPFW
Sbjct: 2561 IHVDMYQLAASMSRSVAASAAVDANGHPSISSSQVDLELRRSHRERELVNALGPEGAGAPREALNEKAVAVTRRVQSKLTGRDFFDDDSEPLNVAAQVQRLITQAASHENLCQCYIGWCPFW 2682
[Close]
BLAST of NO16G00740 vs. NCBI_GenBank
Match: XP_008878039.1 (hypothetical protein, variant 4 [Aphanomyces invadans] >ETV93396.1 hypothetical protein, variant 4 [Aphanomyces invadans])

HSP 1 Score: 121.7 bits (304), Expect = 4.300e-24
Identity = 66/122 (54.10%), Postives = 86/122 (70.49%), Query Frame = 0 
Query:  215 LHLDIGSLAASLSANKTRFSSSVAMPPHSLAHSRLD---HRSARERDLVQAVGPEGMEAPAEVLNEKAIAVIRRVQDKLTGLDF--DNDVALDVPEQVERLIQQATSNENLCQCFIGYCPFW 332
            +H+D+  LAAS+S +    ++  A    S++ S++D    RS RER+LV A+GPEG  AP E LNEKA+AV RRVQ KLTG DF  D+   L+V  QV+RLI QA S+ENLCQC+IG+CPFW
Sbjct: 2545 IHVDMYQLAASMSRSVAASAAVDANGHPSISSSQVDLELRRSHRERELVNALGPEGAGAPREALNEKAVAVTRRVQSKLTGRDFFDDDSEPLNVAAQVQRLITQAASHENLCQCYIGWCPFW 2666
[Close]
BLAST of NO16G00740 vs. NCBI_GenBank
Match: XP_009033961.1 (hypothetical protein AURANDRAFT_52494 [Aureococcus anophagefferens] >EGB11613.1 hypothetical protein AURANDRAFT_52494 [Aureococcus anophagefferens])

HSP 1 Score: 120.9 bits (302), Expect = 7.300e-24
Identity = 66/115 (57.39%), Postives = 83/115 (72.17%), Query Frame = 0 
Query:  222 LAASLSANKTRFSSSVAMP----PHSLAHSRLDHRSARERDLVQAVGPEGMEAPAEVLNEKAIAVIRRVQDKLTGLDF-DNDVALDVPEQVERLIQQATSNENLCQCFIGYCPFW 332
            +AASL+ N TR S+  A        S+A+SRLDHRSARE  LV+A G EG +AP E LNEKA+AV+ RVQDKL+G DF D+   L V +QV+RLI Q+T  +NLCQ F+G+CPFW
Sbjct: 2370 MAASLTGNSTRHSALAASQRGGRAGSVANSRLDHRSARESLLVKAHGAEGADAPIEALNEKALAVMARVQDKLSGCDFRDHQGPLAVADQVDRLIAQSTDVQNLCQSFVGWCPFW 2484
[Close]
BLAST of NO16G00740 vs. NCBI_GenBank
Match: XP_008619195.1 (FKBP12-rapamycin complex-associated protein [Saprolegnia diclina VS20] >EQC27376.1 FKBP12-rapamycin complex-associated protein [Saprolegnia diclina VS20])

HSP 1 Score: 120.9 bits (302), Expect = 7.300e-24
Identity = 69/131 (52.67%), Postives = 86/131 (65.65%), Query Frame = 0 
Query:  215 LHLDIGSLAASLSANKTR-------------FSSSVAMPPHSLAHSRLDHRSARERDLVQAVGPEGMEAPAEVLNEKAIAVIRRVQDKLTGLDFDN-DVALDVPEQVERLIQQATSNENLCQCFIGYCPFW 332
            LHL+I SLAAS+  + +R              ++  A    S A   L +RS RE++LV A+GPEG  AP E LNEKA+AVIRRVQ KLTG DFD+    L V +QV+RLI QA S+ENLCQC+IG+CPFW
Sbjct: 2616 LHLEISSLAASVGFSLSRSLRVNEHVPLDDQATAKAAPVSASQADHELRNRSHREKELVHALGPEGAGAPREALNEKAVAVIRRVQAKLTGRDFDDCREPLSVSDQVQRLITQAASHENLCQCYIGWCPFW 2746
[Close]
BLAST of NO16G00740 vs. NCBI_GenBank
Match: XP_012206510.1 (hypothetical protein SPRG_21038 [Saprolegnia parasitica CBS 223.65] >KDO22806.1 hypothetical protein SPRG_21038 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 120.9 bits (302), Expect = 7.300e-24
Identity = 69/131 (52.67%), Postives = 86/131 (65.65%), Query Frame = 0 
Query:  215 LHLDIGSLAASLS---ANKTRFSSSVAMPPH----------SLAHSRLDHRSARERDLVQAVGPEGMEAPAEVLNEKAIAVIRRVQDKLTGLDFDN-DVALDVPEQVERLIQQATSNENLCQCFIGYCPFW 332
            LHL+I +LAAS+    +   R +  V +  H          S A   L +RS RE++LV A+GPEG  AP E LNEKA+AVIRRVQ KLTG DFD+    L V +QV+RLI QA S+ENLCQC+IG+CPFW
Sbjct: 2668 LHLEISNLAASVGFSLSRSLRVNEHVPLDDHMAPKAAPVSASQADYELRNRSHREKELVHALGPEGAGAPREALNEKAVAVIRRVQAKLTGRDFDDCREPLSVSDQVQRLITQAASHENLCQCYIGWCPFW 2798
[Close]
BLAST of NO16G00740 vs. NCBI_GenBank
Match: OWZ24781.1 (Phosphatidylinositol 3-kinase tor2 [Phytophthora megakarya])

HSP 1 Score: 118.2 bits (295), Expect = 4.700e-23
Identity = 61/99 (61.62%), Postives = 76/99 (76.77%), Query Frame = 0 
Query:  235 SSVAMPPHSLAHSRLDHRSARERDLVQAVGPEGMEAPAEVLNEKAIAVIRRVQDKLTGLDFDND--VALDVPEQVERLIQQATSNENLCQCFIGYCPFW 332
            SS  +PP S+A+    +RS RER+L+ A+GPEG+ AP   LNEKA+AVIRRVQ KL+G DF+ D    LDV  QV+RLI QATS+ENLCQC+IG+CPFW
Sbjct:  127 SSDTVPP-SVANDLHANRSVRERELLSALGPEGIAAPRVALNEKAVAVIRRVQAKLSGRDFEGDGGEPLDVSAQVQRLISQATSHENLCQCYIGWCPFW 224
The following BLAST results are available for this feature:
BLAST of NO16G00740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24051.16.300e-5284.43conserved uncarachetized protein [Nannochloropsis ... [more]
XP_008878028.14.300e-2454.10hypothetical protein H310_12650 [Aphanomyces invad... [more]
XP_008878036.14.300e-2454.10hypothetical protein, variant 1 [Aphanomyces invad... [more]
XP_008878037.14.300e-2454.10hypothetical protein, variant 2 [Aphanomyces invad... [more]
XP_008878038.14.300e-2454.10hypothetical protein, variant 3 [Aphanomyces invad... [more]
XP_008878039.14.300e-2454.10hypothetical protein, variant 4 [Aphanomyces invad... [more]
XP_009033961.17.300e-2457.39hypothetical protein AURANDRAFT_52494 [Aureococcus... [more]
XP_008619195.17.300e-2452.67FKBP12-rapamycin complex-associated protein [Sapro... [more]
XP_012206510.17.300e-2452.67hypothetical protein SPRG_21038 [Saprolegnia paras... [more]
OWZ24781.14.700e-2361.62Phosphatidylinositol 3-kinase tor2 [Phytophthora m... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL150nonsL150Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003062NSK003062Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G00740.1NO16G00740.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|631202gene_5952Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100063g26gene6416Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G00740.1NO16G00740.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G00740 ID=NO16G00740|Name=NO16G00740|organism=Nannochloropsis oceanica|type=gene|length=996bp
ATGGAAAGAGGGCAGGTTGAGATGGAGGAGAAGGAGGAGGAGGAAGGAAA
AGGAGGGGAGATGTGGGCGGACCGTGAGTCACTCGACCCGCGTACGACAG
AGAAGGAGAGGAAGAGCATCGCTGTGCTTCCGGTGGTGGGTGAAGACGTA
ATTTCTCAAGGAGGAGGCGGCGGAGATGGACCAGCGCCGGGTGTGAATCG
CCTGCATCGAATTGCGACACCGGCCGCTATGCCCTCTGTGGAAGAGCACC
ATCAAGTGCATTTTGCGGAGGGCGGACATCACGTCTTGCCGACGGTATCT
GAGCGACGAACTGAGCGCGAAAGAGGATGGGAGGAAGATGGAATGGGCTT
GCAGGAGGATAAGGCCCAAAAAGAGGAAGGGGGGCAGGTCGGCAGGGCGG
TCTCGGAAATGCGAGCTATTGCAAGTGCAACTGTCGGTGGGGATGGGCGA
GGGAGGGAAGAAGGGAGGGAGGAAGAAGATAGTCGCAAAGGAGGAGAAGG
TGAAGGAGGAAGTGGAGGACCACCGCGATATTTGCACAACAATTCCGATT
CATCGTCAGGAGCAGGAACAAGAGCAGCAGCAGCAGTAGGGCCATCGTCC
ATGACGACTTCAACGTCGATGCGTCGGGCCAAGATGATGGAACTTCATTT
AGATATTGGCTCGCTAGCCGCTAGCCTGAGCGCAAACAAAACGCGGTTTA
GCAGTAGTGTAGCCATGCCTCCTCATTCACTCGCTCATTCTCGTCTCGAC
CATCGGAGCGCGCGAGAGAGGGATTTAGTTCAGGCTGTAGGCCCGGAAGG
AATGGAAGCACCAGCGGAGGTCTTGAACGAGAAAGCCATTGCAGTCATTC
GGCGGGTGCAGGATAAATTGACGGGTTTGGATTTCGATAATGACGTTGCC
TTGGATGTGCCAGAGCAGGTGGAAAGGCTGATTCAACAGGCGACGTCGAA
CGAGAATTTGTGTCAGTGTTTTATTGGATATTGTCCATTCTGGTAG
back to top

protein sequence of NO16G00740.1

>NO16G00740.1-protein ID=NO16G00740.1-protein|Name=NO16G00740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=332bp
MERGQVEMEEKEEEEGKGGEMWADRESLDPRTTEKERKSIAVLPVVGEDV
ISQGGGGGDGPAPGVNRLHRIATPAAMPSVEEHHQVHFAEGGHHVLPTVS
ERRTERERGWEEDGMGLQEDKAQKEEGGQVGRAVSEMRAIASATVGGDGR
GREEGREEEDSRKGGEGEGGSGGPPRYLHNNSDSSSGAGTRAAAAVGPSS
MTTSTSMRRAKMMELHLDIGSLAASLSANKTRFSSSVAMPPHSLAHSRLD
HRSARERDLVQAVGPEGMEAPAEVLNEKAIAVIRRVQDKLTGLDFDNDVA
LDVPEQVERLIQQATSNENLCQCFIGYCPFW*
back to top
Synonyms
Publications