NO16G00730, NO16G00730 (gene) Nannochloropsis oceanica

Overview
NameNO16G00730
Unique NameNO16G00730
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1396
Alignment locationchr16:244726..246121 +

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Properties
Property NameValue
DescriptionNudix hydrolase 1
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:244726..246121 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016787hydrolase activity
Vocabulary: INTERPRO
TermDefinition
IPR015797NUDIX_hydrolase_dom-like
IPR000086NUDIX_hydrolase_dom
Homology
[Close]
BLAST of NO16G00730 vs. NCBI_GenBank
Match: EWM24058.1 (nudix hydrolase 1 [Nannochloropsis gaditana])

HSP 1 Score: 234.2 bits (596), Expect = 3.400e-58
Identity = 117/184 (63.59%), Postives = 142/184 (77.17%), Query Frame = 0 
Query:    6 SGCGDGNIPTEPVITPTPNTPTTNVCVGVGVLVHHKEHPGLVLIGRRKGSHGSGSLALPGGHLEVNESVAQCAVREVEEECNLALDSTSVRLVGVTQDVFSESAGKHYVTLIVIAAVLSTSPLLKNMEPHKCEAWEWITLEALVQRRAECFLPLQHALDTFLMKPDILTQGLSGGLKMNENLRQ 190
            +G    N  ++P+I         +V VGVGV+V    H GLVL+GRRKGSHGSGSLALPGGHLE  E++A CAVRE++EECNL LD+TSVRLVGVTQDVF E A KHYVTLIVIAAVL  SP L+NMEP KC AWEW++LE L +R+ ECFLPLQHALDTFL++P +L  GL  GL++N+ L++
Sbjct:    5 TGVEINNAGSQPII-----DAHAHVRVGVGVVVQSTGHQGLVLVGRRKGSHGSGSLALPGGHLESGETIANCAVREIKEECNLDLDATSVRLVGVTQDVFPEPARKHYVTLIVIAAVLPRSPPLQNMEPEKCVAWEWLSLEGLKERKTECFLPLQHALDTFLLRPGLLEDGLENGLRLNDCLQR 183
[Close]
BLAST of NO16G00730 vs. NCBI_GenBank
Match: ETI46859.1 (hypothetical protein F443_08815 [Phytophthora parasitica P1569] >ETL40199.1 hypothetical protein L916_08579 [Phytophthora parasitica] >ETM46606.1 hypothetical protein L914_08534 [Phytophthora parasitica] >ETO75544.1 hypothetical protein F444_08884 [Phytophthora parasitica P1976] >ETP16649.1 hypothetical protein F441_08794 [Phytophthora parasitica CJ01A1] >ETP44687.1 hypothetical protein F442_08759 [Phytophthora parasitica P10297])

HSP 1 Score: 126.7 bits (317), Expect = 7.600e-26
Identity = 69/134 (51.49%), Postives = 88/134 (65.67%), Query Frame = 0 
Query:   28 TNVCVGVGVLVHHKEHPGLVLIGRRKGSHGSGSLALPGGHLEVNESVAQCAVREVEEECNLALDSTSVRLVGVTQDVFSESAGKHYVTLIVIAAVLSTSPLLKNMEPHKCEAWEWITLEALVQRRAECFLPLQH 162
            T V VGVGVL+  K+HP  VLIG+RKGSHG G  ALPGGHLE+ ES  +CA+REV+EE +  LD    +   VT D   E  GKHY+T I++ AV+     ++NMEPHKCE W W+   A ++ R + F PL H
Sbjct:  194 TVVRVGVGVLLMSKKHPNCVLIGQRKGSHGEGKFALPGGHLEMYESWEECALREVKEETD--LDLKEAKFATVTNDPM-EDEGKHYIT-ILMQAVVDDEQTIRNMEPHKCEGWSWVPW-ADLRSRDDMFTPLFH 322
[Close]
BLAST of NO16G00730 vs. NCBI_GenBank
Match: ETI46860.1 (hypothetical protein, variant [Phytophthora parasitica P1569] >ETK86785.1 hypothetical protein, variant [Phytophthora parasitica] >ETL40200.1 hypothetical protein, variant [Phytophthora parasitica] >ETM46607.1 hypothetical protein, variant [Phytophthora parasitica] >ETO75545.1 hypothetical protein, variant [Phytophthora parasitica P1976] >ETP16650.1 hypothetical protein, variant [Phytophthora parasitica CJ01A1] >ETP44688.1 hypothetical protein, variant [Phytophthora parasitica P10297])

HSP 1 Score: 126.7 bits (317), Expect = 7.600e-26
Identity = 69/134 (51.49%), Postives = 88/134 (65.67%), Query Frame = 0 
Query:   28 TNVCVGVGVLVHHKEHPGLVLIGRRKGSHGSGSLALPGGHLEVNESVAQCAVREVEEECNLALDSTSVRLVGVTQDVFSESAGKHYVTLIVIAAVLSTSPLLKNMEPHKCEAWEWITLEALVQRRAECFLPLQH 162
            T V VGVGVL+  K+HP  VLIG+RKGSHG G  ALPGGHLE+ ES  +CA+REV+EE +  LD    +   VT D   E  GKHY+T I++ AV+     ++NMEPHKCE W W+   A ++ R + F PL H
Sbjct:  143 TVVRVGVGVLLMSKKHPNCVLIGQRKGSHGEGKFALPGGHLEMYESWEECALREVKEETD--LDLKEAKFATVTNDPM-EDEGKHYIT-ILMQAVVDDEQTIRNMEPHKCEGWSWVPW-ADLRSRDDMFTPLFH 271
[Close]
BLAST of NO16G00730 vs. NCBI_GenBank
Match: ETK86784.1 (hypothetical protein L915_08650 [Phytophthora parasitica])

HSP 1 Score: 126.7 bits (317), Expect = 7.600e-26
Identity = 69/134 (51.49%), Postives = 88/134 (65.67%), Query Frame = 0 
Query:   28 TNVCVGVGVLVHHKEHPGLVLIGRRKGSHGSGSLALPGGHLEVNESVAQCAVREVEEECNLALDSTSVRLVGVTQDVFSESAGKHYVTLIVIAAVLSTSPLLKNMEPHKCEAWEWITLEALVQRRAECFLPLQH 162
            T V VGVGVL+  K+HP  VLIG+RKGSHG G  ALPGGHLE+ ES  +CA+REV+EE +  LD    +   VT D   E  GKHY+T I++ AV+     ++NMEPHKCE W W+   A ++ R + F PL H
Sbjct:  218 TVVRVGVGVLLMSKKHPNCVLIGQRKGSHGEGKFALPGGHLEMYESWEECALREVKEETD--LDLKEAKFATVTNDPM-EDEGKHYIT-ILMQAVVDDEQTIRNMEPHKCEGWSWVPW-ADLRSRDDMFTPLFH 346
[Close]
BLAST of NO16G00730 vs. NCBI_GenBank
Match: ETL93343.1 (hypothetical protein L917_08481 [Phytophthora parasitica])

HSP 1 Score: 126.7 bits (317), Expect = 7.600e-26
Identity = 69/134 (51.49%), Postives = 88/134 (65.67%), Query Frame = 0 
Query:   28 TNVCVGVGVLVHHKEHPGLVLIGRRKGSHGSGSLALPGGHLEVNESVAQCAVREVEEECNLALDSTSVRLVGVTQDVFSESAGKHYVTLIVIAAVLSTSPLLKNMEPHKCEAWEWITLEALVQRRAECFLPLQH 162
            T V VGVGVL+  K+HP  VLIG+RKGSHG G  ALPGGHLE+ ES  +CA+REV+EE +  LD    +   VT D   E  GKHY+T I++ AV+     ++NMEPHKCE W W+   A ++ R + F PL H
Sbjct:  218 TVVRVGVGVLLMSKKHPNCVLIGQRKGSHGEGKFALPGGHLEMYESWEECALREVKEETD--LDLKEAKFATVTNDPM-EDEGKHYIT-ILMQAVVDDEQTIRNMEPHKCEGWSWVPW-ADLRSRDDMFTPLFH 346
[Close]
BLAST of NO16G00730 vs. NCBI_GenBank
Match: XP_008905674.1 (hypothetical protein, variant [Phytophthora parasitica INRA-310] >ETL93344.1 hypothetical protein, variant [Phytophthora parasitica] >ETN09113.1 hypothetical protein, variant [Phytophthora parasitica INRA-310])

HSP 1 Score: 126.7 bits (317), Expect = 7.600e-26
Identity = 69/134 (51.49%), Postives = 88/134 (65.67%), Query Frame = 0 
Query:   28 TNVCVGVGVLVHHKEHPGLVLIGRRKGSHGSGSLALPGGHLEVNESVAQCAVREVEEECNLALDSTSVRLVGVTQDVFSESAGKHYVTLIVIAAVLSTSPLLKNMEPHKCEAWEWITLEALVQRRAECFLPLQH 162
            T V VGVGVL+  K+HP  VLIG+RKGSHG G  ALPGGHLE+ ES  +CA+REV+EE +  LD    +   VT D   E  GKHY+T I++ AV+     ++NMEPHKCE W W+   A ++ R + F PL H
Sbjct:  143 TVVRVGVGVLLMSKKHPNCVLIGQRKGSHGEGKFALPGGHLEMYESWEECALREVKEETD--LDLKEAKFATVTNDPM-EDEGKHYIT-ILMQAVVDDEQTIRNMEPHKCEGWSWVPW-ADLRSRDDMFTPLFH 271
[Close]
BLAST of NO16G00730 vs. NCBI_GenBank
Match: XP_008905673.1 (hypothetical protein PPTG_11152 [Phytophthora parasitica INRA-310] >ETN09112.1 hypothetical protein PPTG_11152 [Phytophthora parasitica INRA-310])

HSP 1 Score: 126.7 bits (317), Expect = 7.600e-26
Identity = 69/134 (51.49%), Postives = 88/134 (65.67%), Query Frame = 0 
Query:   28 TNVCVGVGVLVHHKEHPGLVLIGRRKGSHGSGSLALPGGHLEVNESVAQCAVREVEEECNLALDSTSVRLVGVTQDVFSESAGKHYVTLIVIAAVLSTSPLLKNMEPHKCEAWEWITLEALVQRRAECFLPLQH 162
            T V VGVGVL+  K+HP  VLIG+RKGSHG G  ALPGGHLE+ ES  +CA+REV+EE +  LD    +   VT D   E  GKHY+T I++ AV+     ++NMEPHKCE W W+   A ++ R + F PL H
Sbjct:  218 TVVRVGVGVLLMSKKHPNCVLIGQRKGSHGEGKFALPGGHLEMYESWEECALREVKEETD--LDLKEAKFATVTNDPM-EDEGKHYIT-ILMQAVVDDEQTIRNMEPHKCEGWSWVPW-ADLRSRDDMFTPLFH 346
[Close]
BLAST of NO16G00730 vs. NCBI_GenBank
Match: KUG00482.1 (8-oxo-dGTP diphosphatase NUDT15 [Phytophthora nicotianae])

HSP 1 Score: 126.7 bits (317), Expect = 7.600e-26
Identity = 69/134 (51.49%), Postives = 88/134 (65.67%), Query Frame = 0 
Query:   28 TNVCVGVGVLVHHKEHPGLVLIGRRKGSHGSGSLALPGGHLEVNESVAQCAVREVEEECNLALDSTSVRLVGVTQDVFSESAGKHYVTLIVIAAVLSTSPLLKNMEPHKCEAWEWITLEALVQRRAECFLPLQH 162
            T V VGVGVL+  K+HP  VLIG+RKGSHG G  ALPGGHLE+ ES  +CA+REV+EE +  LD    +   VT D   E  GKHY+T I++ AV+     ++NMEPHKCE W W+   A ++ R + F PL H
Sbjct:  131 TVVRVGVGVLLMSKKHPNCVLIGQRKGSHGEGKFALPGGHLEMYESWEECALREVKEETD--LDLKEAKFATVTNDPM-EDEGKHYIT-ILMQAVVDDEQTIRNMEPHKCEGWSWVPW-ADLRSRDDMFTPLFH 259
[Close]
BLAST of NO16G00730 vs. NCBI_GenBank
Match: KUF90516.1 (hypothetical protein AM588_10010415 [Phytophthora nicotianae])

HSP 1 Score: 124.8 bits (312), Expect = 2.900e-25
Identity = 68/134 (50.75%), Postives = 87/134 (64.93%), Query Frame = 0 
Query:   28 TNVCVGVGVLVHHKEHPGLVLIGRRKGSHGSGSLALPGGHLEVNESVAQCAVREVEEECNLALDSTSVRLVGVTQDVFSESAGKHYVTLIVIAAVLSTSPLLKNMEPHKCEAWEWITLEALVQRRAECFLPLQH 162
            T V VGVGVL+  K+HP  VLIG+RKGSHG G  ALPGGHLE+ ES  +CA+REV+EE +L       +   VT D   E  GKHY+T I++ AV+     ++NMEPHKCE W W+   A ++ R + F PL H
Sbjct:  143 TVVRVGVGVLLMSKKHPNCVLIGQRKGSHGEGKFALPGGHLEMYESWEECALREVKEETDL----KEAKFATVTNDPM-EDEGKHYIT-ILMQAVVDDEQTIRNMEPHKCEGWSWVPW-ADLRSRDDMFTPLFH 269
[Close]
BLAST of NO16G00730 vs. NCBI_GenBank
Match: OWZ21703.1 (Guanine deaminase [Phytophthora megakarya])

HSP 1 Score: 124.0 bits (310), Expect = 4.900e-25
Identity = 67/134 (50.00%), Postives = 90/134 (67.16%), Query Frame = 0 
Query:   28 TNVCVGVGVLVHHKEHPGLVLIGRRKGSHGSGSLALPGGHLEVNESVAQCAVREVEEECNLALDSTSVRLVGVTQDVFSESAGKHYVTLIVIAAVLSTSPLLKNMEPHKCEAWEWITLEALVQRRAECFLPLQH 162
            T V VGVGVL+  K+HP  VL+G+RKGSHG+G  +LPGGHLE+ ES  +CA+REV+EE +  LD    +   VT D   E  GKHY+T I++ AV+     +KNMEP+KCE W W+   A ++ R + F PL+H
Sbjct:  479 TVVRVGVGVLLMSKKHPDCVLLGQRKGSHGAGKFSLPGGHLEMYESWEECALREVKEETD--LDLKEAKFSTVTNDPM-EDEGKHYIT-ILMQAVVDDEQTVKNMEPNKCEGWNWVAW-ADLRSRDDLFTPLRH 607
The following BLAST results are available for this feature:
BLAST of NO16G00730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24058.13.400e-5863.59nudix hydrolase 1 [Nannochloropsis gaditana][more]
ETI46859.17.600e-2651.49hypothetical protein F443_08815 [Phytophthora para... [more]
ETI46860.17.600e-2651.49hypothetical protein, variant [Phytophthora parasi... [more]
ETK86784.17.600e-2651.49hypothetical protein L915_08650 [Phytophthora para... [more]
ETL93343.17.600e-2651.49hypothetical protein L917_08481 [Phytophthora para... [more]
XP_008905674.17.600e-2651.49hypothetical protein, variant [Phytophthora parasi... [more]
XP_008905673.17.600e-2651.49hypothetical protein PPTG_11152 [Phytophthora para... [more]
KUG00482.17.600e-2651.498-oxo-dGTP diphosphatase NUDT15 [Phytophthora nico... [more]
KUF90516.12.900e-2550.75hypothetical protein AM588_10010415 [Phytophthora ... [more]
OWZ21703.14.900e-2550.00Guanine deaminase [Phytophthora megakarya][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL150nonsL150Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003061NSK003061Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G00730.1NO16G00730.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593241gene_5951Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100063g25gene6415Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G00730.1NO16G00730.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G00730 ID=NO16G00730|Name=NO16G00730|organism=Nannochloropsis oceanica|type=gene|length=1396bp
AACACCCACAGACCCACAGAAGCACAGACACGTCCAGGCATGAGCCACAT
GAGCAGTGGCTGCGGTGATGGAAACATTCCGACAGAGgtaagaaactctt
ttcgtcttcatcgacctcctccccccctttcatccgttgatcctccattc
tatattcttgattatttcgtgactcgctatcctgcccgtaccgtatcatg
tggatcaacacttagtcaagcttgtatctcggcaccttgtggtagcctgt
cgaccattgccacatgacttgaaaaccactcaagagggaaaagctctcat
caagtctctcctttggttttgtctaaccagctttcttggcgtccggggat
cttttccagatctacaccgtatgcaagacggagagaacttgctttctcct
catctcataccagcttcactcaaacacagCCTGTCATCACGCCTACCCCA
AATACCCCGACAACCAACGTCTGCGTCGGTGTGGGCGTCCTCGTCCACCA
CAAAGAGCATCCGGGTCTCGTCTTGATCGGGCGACGGAAAGGTTCGCATG
GTAGTGGAAGCCTTGCACTTCCTGGGGGCCATTTGGAGGTGAATGAGAGT
GTGGCCCAGTGTGCTGTGCGGGAGGTGGAGGAAGAGTGCAACCTCGCCTT
GGATTCGACAAGTGTGCGTTTGGTTGGCGTGACGCAAGATGTGTTTTCTG
AATCTGCGGGCAAGCACTACGTGACCCTGATTGTAATAGCGGCGGTGCTT
TCAACTTCACCCCTTTTGAAAAACATGGAGCCGCATAAATGTGAGGCTTG
GGAGTGGATTACCCTAGAGGCATTGGTTCAGAGGAGAGCAGAGTGTTTCC
TGCCATTACAGCATGCGCTTGACACGTTTCTGATGAAACCGGATATATTG
ACGCAGGGGCTGAGCGGAGGGCTGAAAATGAACGAGAATTTACGGCAATG
AGATTAAAAAAACAGAGATGATTTTGAAGTTGAATAAGCTAAAGTGAAGA
TTTCGCGGGGGGGACTGGTGGAGATTTGGTGCTGCCCGTGTTTTGATATA
CATGCTCTTCGATTTATATCATATCTGAGAGGATTCGCTTTTCTTTTATG
TGGTTGCCATGGTTTTTGGTAGAAATAGGCGTTGCTCGATAGTTTATGGG
ATTTCAGCCCCTCTTGAGTAAGCATTCAAAGATTTCAGATCTGACCACAC
GACGGACATCATAAGTCCGATTCAACACACCCTTCATATTGCGAGTGTTC
GGTTTTGTGTCTTGTATTGAAAGACTGAAAACCCTGCGAGAAACCCGGAC
ATGGAGTAAGTAAGGTGGAGTCGCTAGATTATCACGTGTTCTTCCCGGTA
CAAAAAAGTGATTTGACATTGGGCTGCAAGAAAGAAACTTCTACCC
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protein sequence of NO16G00730.1

>NO16G00730.1-protein ID=NO16G00730.1-protein|Name=NO16G00730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=190bp
MSHMSSGCGDGNIPTEPVITPTPNTPTTNVCVGVGVLVHHKEHPGLVLIG
RRKGSHGSGSLALPGGHLEVNESVAQCAVREVEEECNLALDSTSVRLVGV
TQDVFSESAGKHYVTLIVIAAVLSTSPLLKNMEPHKCEAWEWITLEALVQ
RRAECFLPLQHALDTFLMKPDILTQGLSGGLKMNENLRQ*
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Synonyms
Publications