NO16G00720, NO16G00720 (gene) Nannochloropsis oceanica

Overview
NameNO16G00720
Unique NameNO16G00720
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1207
Alignment locationchr16:243286..244492 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:243286..244492 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO16G00720 vs. NCBI_GenBank
Match: EWM24059.1 (hypothetical protein Naga_100063g24 [Nannochloropsis gaditana])

HSP 1 Score: 251.5 bits (641), Expect = 3.800e-63
Identity = 112/164 (68.29%), Postives = 131/164 (79.88%), Query Frame = 0
Query:  110 RSITSIGTGILLPLFLLLQPSHSSPFDPHPLPLLLGLCFFNGWYIRVTDHKKHLAFALIVGSFKHPGANSYTEHYVALVYSDKQGNMHTAHAFPDPDSVTIDMDSEGYVGVPSNFTWRSEEVGELHIGGNEGHFDFTLPGIAAVATFHDRVPWCEKRPEMGGPE 274
            R I +IG G+LLPLFL L  S +SPFDPHPLPL+L LCFFNGWYIRVTDH+K +AFA IVGSFKHPGA +YTEHYV LVY+D+ G M TAHAFP PDSVTI+  SEG+ GVPSNFTW+++ VG LH+G +EG  D  LPG+ A A FHDRVPW  +RP+  GPE
Sbjct:  117 RPIKTIGPGVLLPLFLFLHSSQASPFDPHPLPLMLSLCFFNGWYIRVTDHEKQVAFAAIVGSFKHPGATNYTEHYVGLVYADRSGKMQTAHAFPPPDSVTIERGSEGFDGVPSNFTWKAKGVGRLHVGKDEGLLDIDLPGMRATAHFHDRVPWNAERPDTDGPE 280          
BLAST of NO16G00720 vs. NCBI_GenBank
Match: CBN77444.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 107.1 bits (266), Expect = 1.200e-19
Identity = 54/137 (39.42%), Postives = 73/137 (53.28%), Query Frame = 0
Query:  197 HTAHAFPDPDSVTIDMDSEGYVGVPS-----NFTWRSEEVGELHIGGNEGHFDFTLPGIAAVATFHDRVPWCEKRPEMGGPEGWLGSTPLLPCHYFVHSLASRTTYRLRLRNKPSSSXXXPPSPLHPPISPGRAMPT 329
            HT HAFP  D+VTI    E   GVP+     +FTW ++ +G   + G++G   F LP ++  A+F  R PW E+RP   GPEGWL  T LLP HYFV S+ S   Y L+    P +        +H   + G + PT
Sbjct:  368 HTFHAFPPADTVTILCRGEPVNGVPNLRDDPSFTWEADGIGSFAVDGDKGRLSFQLPELSVAASFRYRQPWSEERPNSAGPEGWLQRTGLLPLHYFVQSMGSEAGYSLKATGAPRAVVGR--GSIHMEANYGESFPT 502          
BLAST of NO16G00720 vs. NCBI_GenBank
Match: XP_005836019.1 (hypothetical protein GUITHDRAFT_136224 [Guillardia theta CCMP2712] >EKX49039.1 hypothetical protein GUITHDRAFT_136224 [Guillardia theta CCMP2712])

HSP 1 Score: 102.4 bits (254), Expect = 2.800e-18
Identity = 73/222 (32.88%), Postives = 95/222 (42.79%), Query Frame = 0
Query:  126 LLQPSHSSPFDPHPLPLLLGLCFFNGWYIRVTDHKKHLAFALIVGSFKHPGANSYTEHYVALVYSD--------KQGNMHTAHAFPDPDSVTIDMDSEGYVGVP-------------SNFTWRSEEVGELHI--GGNEGHFDFTLPG-----IAAVATFHDRVPW-----------CEKRPEM------GGPEGWLGSTPLLPCHYFVHSLASRTTYRLRLR 303
            LL PS  + F   PL L     FF+GW+IR+TD     + +LIVGS +  G+ S+ EHYV++ +S         K   + + H     + V+I  D     G               S+F+W S+E G +    GG     D  L       I   A      PW              RP +       GPEGWLG TPLLPC YFV SL S  +Y LR R
Sbjct:   84 LLPPSGQTSF-MMPLALPRRKPFFDGWFIRITDLAMKTSCSLIVGSMRRSGSESFNEHYVSISFSSPRFGRKGHKPYELQSFHHVSTQEEVSILFDERKMSGFENEIDWRAPAAGRCSSFSWESKECGSMRFLDGGARVEVDMRLRNERNEVIELRAKLRQPKPWGYARVRGERLEIHSRPSLTSRKNEAGPEGWLGRTPLLPCRYFVQSLGSECSYTLRRR 304          
BLAST of NO16G00720 vs. NCBI_GenBank
Match: XP_022093235.1 (uncharacterized protein LOC110980656 [Acanthaster planci])

HSP 1 Score: 94.4 bits (233), Expect = 7.800e-16
Identity = 60/184 (32.61%), Postives = 88/184 (47.83%), Query Frame = 0
Query:  125 LLLQPSHSSPFDPHPLPLLLGLCFFNGWYIRVTDHKKHLAFALIVGS-FKHPGA---NSYTEHYVALVYS-DKQGNMHTAHAFPDPDSVTIDMDSEGYV------GVPSNFTWRSEEVGELHIGGNEGHFDFTLPGIAAVATFHDRVPWCEKRPEMGGPEGWLGSTPLLPCHYFVHSLASRTTY 298
            L  Q   ++ +DPH  P +    F  GWY R+TD     +F ++ G     P A    S    YVA+V S   Q     A AFPDPD +++ +D    V        P+NF W ++  G  ++      F+FT+   +   +F   VPW    P   GPEGWL + P +P H+FV+SL++   Y
Sbjct:   19 LFFQFGIANQYDPHVYPSIGP--FIEGWYARLTDTSTPQSFGVLFGRVLPKPTAERKKSIPLTYVAIVCSAGDQAPFVVAEAFPDPDHISVTVDGGMPVTENPDNRSPANFRWAADPYGSFNVTAESTVFNFTIGDKSLAGSFGAPVPW---GPVGQGPEGWLSNLPFIPLHWFVYSLSTFGDY 197          
BLAST of NO16G00720 vs. NCBI_GenBank
Match: XP_022783187.1 (probable tocopherol cyclase, chloroplastic [Stylophora pistillata])

HSP 1 Score: 87.8 bits (216), Expect = 7.300e-14
Identity = 48/170 (28.24%), Postives = 80/170 (47.06%), Query Frame = 0
Query:  135 FDPHPLPLLLGLCFFNGWYIRVTDHKKHLAFALIVGSF----KHPGANSYTEHYVALVYSDKQG-NMHTAHAFPDPDSVTIDMDSEGYVG-----VPSNFTWRSEEVGELHIGGNEGHFDFT-LPGIAAVATFHDRVPWCEKRPEMGGPEGWLGSTPLLPCHYFVHSLAS 294
            +DPH  P      F  GWY R+ D   + +F ++ G      K P    Y ++ V++++S   G  M     +P  + + + +D +          P+NF W+++  G   +  NE   +FT + G++ +       PW    P   GPEGW+ + P LP H+FV+SL S
Sbjct:   29 YDPHLFP--AEGPFMEGWYSRIIDINSNHSFGVLFGQVLIQKKGPEFGHYPQNMVSIIHSKGNGRTMERFSVYPSNEDIVVTVDGKSVSSNPDFKSPANFEWKAKPYGYFRVTENETRINFTNVDGVSFIGVLGPPKPW---GPNGEGPEGWIDNVPFLPLHWFVYSLGS 193          
BLAST of NO16G00720 vs. NCBI_GenBank
Match: XP_002961578.1 (uncharacterized protein LOC9630508 [Selaginella moellendorffii] >XP_024531867.1 uncharacterized protein LOC9641614 [Selaginella moellendorffii] >EFJ36838.1 hypothetical protein SELMODRAFT_437910 [Selaginella moellendorffii])

HSP 1 Score: 84.3 bits (207), Expect = 8.000e-13
Identity = 56/179 (31.28%), Postives = 77/179 (43.02%), Query Frame = 0
Query:  130 SHSSPFDPHP------LP-LLLGLCFFNGWYIRVTDHKKHLAFALIVGSFKHPGANSYT--EHYVALVYSDKQGNMH-TAHAFPDPDSVTI-DMDSEGYVGVPSNFTWRSEEVGELHIGGNEGHFDFTLPGIAAVATFHDRVPWCEKRPEMGGPEGWLGSTPLLPCHYFVHSLASRTTY 298
            S   P+DPH       LP  +     F GWY R+ D  +  +  +I+       A +Y   E  V L++SD   + H  A    D    TI D+        P  F W +  +G++ +  NE   +  L G          VPW +      GPEGW G  PL PCH++VHSL SR  Y
Sbjct:   60 SGQHPWDPHKPSFSRLLPERIRPYPSFEGWYTRLVDEPRQFSAGVIM-------ATNYATQESQVTLLFSDSSRSTHAVAVKTKDAKFSTIGDLSGADNDDEPKGFQWEAAGIGKIVMKPNESEVEVRLNGYDLRVETSGTVPW-DSGNSKKGPEGWAGKVPLFPCHWYVHSLGSRAKY 230          
BLAST of NO16G00720 vs. NCBI_GenBank
Match: PFX30142.1 (putative tocopherol cyclase, chloroplastic [Stylophora pistillata])

HSP 1 Score: 83.6 bits (205), Expect = 1.400e-12
Identity = 43/154 (27.92%), Postives = 74/154 (48.05%), Query Frame = 0
Query:  151 GWYIRVTDHKKHLAFALIVGSF----KHPGANSYTEHYVALVYSDKQG-NMHTAHAFPDPDSVTIDMDSEGYVG-----VPSNFTWRSEEVGELHIGGNEGHFDFT-LPGIAAVATFHDRVPWCEKRPEMGGPEGWLGSTPLLPCHYFVHSLAS 294
            GWY R+ D   + +F ++ G      K P    Y ++ V++++S   G  M     +P  + + + +D +          P+NF W+++  G   +  NE   +FT + G++ +       PW    P   GPEGW+ + P LP H+FV+SL S
Sbjct:    3 GWYSRIIDINSNHSFGVLFGQVLIQKKGPEFGHYPQNMVSIIHSKGNGRTMERFSVYPSNEDIVVTVDGKSVSSNPDFKSPANFEWKAKPYGYFRVTENETRINFTNVDGVSFIGVLGPPKPW---GPNGEGPEGWIDNVPFLPLHWFVYSLGS 153          
BLAST of NO16G00720 vs. NCBI_GenBank
Match: XP_003725972.1 (PREDICTED: uncharacterized protein LOC100893860 [Strongylocentrotus purpuratus])

HSP 1 Score: 82.0 bits (201), Expect = 4.000e-12
Identity = 53/183 (28.96%), Postives = 82/183 (44.81%), Query Frame = 0
Query:  132 SSPFDPHPLPLLLGLCFFNGWYIRVTDHKKHLAFALIVGSFKHPGANSYTEH----------YVALVYSDKQGN-MHTAHAFPDPDSVTI------DMDSEGYVGVPSNFTWRSEEVGELHIGGNEGHFDFTLPGIAAVATFHDRVPWCEKRPEMGGPEGWLGSTPLLPCHYFVHSLASRTTY 298
            +S +DPH  P      FF GWY R+TD     +F ++ G      + S +            Y++LV S  QG+ M    A+PD D + +       ++ +  +  PS F +     G  ++  N   F FT+ G+     F   + W        GPEGWL   P+LP H+FV+SL +  +Y
Sbjct:   16 ASQYDPHLYPPTGP--FFEGWYTRLTDTDNDRSFGVLFGRVLPRNSQSTSTXXSTWDSNPTTYISLVCSKGQGSPMVVVQAYPDEDDIEVTVRGGRPINKDPSLQAPSYFEYVVRPYGFYNVTPNSTVFSFTIDGVTFAGNFTRPLLWDSTGQ---GPEGWLTDLPMLPIHWFVYSLGTPGSY 193          
BLAST of NO16G00720 vs. NCBI_GenBank
Match: CEM04057.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 79.0 bits (193), Expect = 3.400e-11
Identity = 64/229 (27.95%), Postives = 93/229 (40.61%), Query Frame = 0
Query:  148 FFNGWYIRVTDHKKHLAFALIVGSF-------KHPGANSYTEHYVALVYSDKQGNMHTAHAFP---DPDSVTIDMDSEGYV-----GVPSNFT-----WRSEEVGELHIGGNEG--HFDFTLPGIAAVATFHDRVPWCEK------RPEM-----------------GGPEGWLGSTPLLPCHYFVHSLASRTTYRLRLRN---------KPSSSXXXPPSPLHPPISP 323
            FF GW  R+ D  ++    +I+GSF       +     S+  HYV   +SD  G  HT HAFP    P +V + +D + ++     G PS  T     WR+ +VG   I   +G    D    G+         + W ++      R ++                   PEGWL  TPLLP HY V  L S T Y + L+          +P+++   PP P  P   P
Sbjct:  104 FFYGWCFRMVDITRNRTATVIIGSFIANQRPKEGEARPSFASHYVFAGFSDTDGTFHTEHAFPCPMAPSAVRLSLDGQDFLSPQMRGCPSLRTFKRVEWRAPDVGHFVIDRTKGQAQLDILTDGLHVRLNASRPLGWTDRLLAVTNRTKVWPADFANSAPVSLCNAGSTPEGWLAHTPLLPLHYDVVMLGSETDYEICLKRGKGVAPPAFRPTAA---PPLPSLPDSMP 329          
BLAST of NO16G00720 vs. NCBI_GenBank
Match: XP_002961574.1 (uncharacterized protein LOC9630505 [Selaginella moellendorffii] >EFJ36834.1 hypothetical protein SELMODRAFT_403579 [Selaginella moellendorffii])

HSP 1 Score: 75.1 bits (183), Expect = 4.900e-10
Identity = 42/119 (35.29%), Postives = 55/119 (46.22%), Query Frame = 0
Query:  182 EHYVALVYSDKQGNMHTAHAFPDPD---SVTIDMDSEGYVGVPSNFTWRSEEVGELHIGGNEGHFDFTLPGIAAVATFHDRVPWCEKRPEMGGPEGWLGSTPLLPCHYFVHSLASRTTY 298
            E  V L++SD   + H A A    D   S T D+        P  F W +  +G++ +  NE   +  L G        D VPW +      GPEGW G  PL PCH++VHSL SR  Y
Sbjct:    9 ESQVTLLFSDSSHSSH-AVAVKTKDAKFSTTGDLSGADNGDEPKRFQWEAAGIGKIVMKPNESEVEVWLNGYDLRVETSDTVPW-DSGNSKKGPEGWAGKVPLFPCHWYVHSLGSRAKY 125          
The following BLAST results are available for this feature:
BLAST of NO16G00720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 13
Position :
0
Zoom :
x 1
100200300400500600700800900100011001200Expect = 3.80e-63 / Id = 68.29Expect = 2.80e-18 / Id = 32.88Expect = 7.80e-16 / Id = 32.61Expect = 7.30e-14 / Id = 28.24Expect = 8.00e-13 / Id = 31.28Expect = 4.00e-12 / Id = 28.96Expect = 3.40e-11 / Id = 27.95SequenceEWM24059.1CBN77444.1XP_005836019.1XP_022093235.1XP_022783187.1XP_002961578.1PFX30142.1XP_003725972.1CEM04057.1XP_002961574.1
Match NameE-valueIdentityDescription
EWM24059.13.800e-6368.29hypothetical protein Naga_100063g24 [Nannochlorops... [more]
CBN77444.11.200e-1939.42conserved unknown protein [Ectocarpus siliculosus][more]
XP_005836019.12.800e-1832.88hypothetical protein GUITHDRAFT_136224 [Guillardia... [more]
XP_022093235.17.800e-1632.61uncharacterized protein LOC110980656 [Acanthaster ... [more]
XP_022783187.17.300e-1428.24probable tocopherol cyclase, chloroplastic [Stylop... [more]
XP_002961578.18.000e-1331.28uncharacterized protein LOC9630508 [Selaginella mo... [more]
PFX30142.11.400e-1227.92putative tocopherol cyclase, chloroplastic [Stylop... [more]
XP_003725972.14.000e-1228.96PREDICTED: uncharacterized protein LOC100893860 [S... [more]
CEM04057.13.400e-1127.95unnamed protein product [Vitrella brassicaformis C... [more]
XP_002961574.14.900e-1035.29uncharacterized protein LOC9630505 [Selaginella mo... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL150nonsL150Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G00720.1NO16G00720.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100063g24gene6414Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G00720.1NO16G00720.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G00720 ID=NO16G00720|Name=NO16G00720|organism=Nannochloropsis oceanica|type=gene|length=1207bp
ATGCGCTGTTATCATCGAGTCCTCTCCCCCGTCATGCTCCTGCTCCTTGC
CCTTCAAGCCGCCTTCCTAGTTCTTACATCGGCCGATGCTGCCGCTGCGA
GAGGTGTAGGGTCAAGCTCATCCTCTTCAACACTACCGGCGCCCTTTAAC
TCGCCAGATGTACATCCAAGCAAAAACGCCGTCAACCCTCCCCCACCGCC
CGCCTTCGCCTCCTCCTCCGCCCTTCCCCGACGACGCTGGACAGACAAGC
GCGCCCCATCTTCAACCACATCTTATTCTGCATCTGCAAAGACCGACTCA
AGGCTACTGCAAGGCGTTCACGGGACCCGAAGTATTACAAGCATCGGCAC
CGGCATCCTCCTCCCCCTCTTTCTCCTCCTCCAACCCTCCCACTCCTCCC
CCTTCGACCCCCATCCCCTGCCTCTTCTCCTTGGTCTCTGCTTTTTTAAC
GGCTGGTATATTCGCGTCACAGACCATAAAAAACACCTAGCGTTTGCCCT
TATCGTCGGGTCATTCAAACATCCAGGGGCGAACTCCTACACTGAACATT
ATGTTGCTCTCGTCTACTCAGATAAGCAGGGTAATATGCACACCGCTCAC
GCCTTCCCCGATCCCGACTCCGTGACAATCGACATGGACAGCGAGGGGTA
CGTGGGTGTGCCTTCTAACTTCACTTGGCGCTCAGAAGAAGTTGGCGAAT
TGCACATAGGGGGAAACGAAGGTCATTTTGATTTCACCCTGCCGGGGATC
GCGGCGGTGGCGACGTTTCATGACAGGGTGCCATGGTGTGAAAAGAGGCC
TGAGATGGGTGGACCGGAGgtaagaacgatagagagagggagatgtgagg
tgacaaatatgcatcgaatgcttgcgacaggatgaaagtgggatggaaaa
atggtagtggtagctgctcccaacctgtttctccccagacttacccaccc
actcaatcctccaatagGGATGGCTCGGCAGCACCCCCCTCCTCCCCTGT
CATTACTTTGTCCACTCCCTCGCATCCCGCACCACCTACCGCCTCCGCCT
TAGGAATAAGCCCTCCTCTTCCTCCTCCTCCCCTCCGTCCCCCCTCCATC
CTCCCATCTCTCCGGGCAGGGCTATGCCCACATGGAAAGCAATTACGGGA
ACCACTTCCCTTCCGGCTGGCTATGGTGCAATGCCATTTCGCCTCAGAGG
GAAGTGA
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protein sequence of NO16G00720.1

>NO16G00720.1-protein ID=NO16G00720.1-protein|Name=NO16G00720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=353bp
MRCYHRVLSPVMLLLLALQAAFLVLTSADAAAARGVGSSSSSSTLPAPFN
SPDVHPSKNAVNPPPPPAFASSSALPRRRWTDKRAPSSTTSYSASAKTDS
RLLQGVHGTRSITSIGTGILLPLFLLLQPSHSSPFDPHPLPLLLGLCFFN
GWYIRVTDHKKHLAFALIVGSFKHPGANSYTEHYVALVYSDKQGNMHTAH
AFPDPDSVTIDMDSEGYVGVPSNFTWRSEEVGELHIGGNEGHFDFTLPGI
AAVATFHDRVPWCEKRPEMGGPEGWLGSTPLLPCHYFVHSLASRTTYRLR
LRNKPSSSSSSPPSPLHPPISPGRAMPTWKAITGTTSLPAGYGAMPFRLR
GK*
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Synonyms
Publications