NO16G00710, NO16G00710 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO16G00710 vs. NCBI_GenBank
Match: CBN77444.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 113.6 bits (283), Expect = 4.800e-22 Identity = 62/138 (44.93%), Postives = 79/138 (57.25%), Query Frame = 0 Query: 1 MVGGKFEIGPTAPTTWIVAFRSPRFEWTFRTTDLDKVTARLDYSTRTLRLEARSRCGRRRIEVMMVAPPGSFGPPLYVPTRGGFSCLPGCRESFTATAHIKAVDEG----GRGGGRRIVLEEVCEVPLAALELGGALQ 135 + GG+F IGP T++++AFRS R W FRTTDLD++ L L A+S R ++ + AP GSFG +YVPT GFS PGC ES+ ATA + +G G G R +VL E E LAALE GG Q Sbjct: 565 LTGGRFVIGPITTTSFVLAFRSERHNWNFRTTDLDRIVVTASRKDHRLTLVAKSWGDNRVLKADIRAPEGSFGSAIYVPTPEGFSNAPGCVESYAATARFRLYTKGDKLEGDGVTRPLVLREEVEFKLAALEFGGEYQ 702
BLAST of NO16G00710 vs. NCBI_GenBank
Match: CEM04057.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 106.3 bits (264), Expect = 7.700e-20 Identity = 65/144 (45.14%), Postives = 81/144 (56.25%), Query Frame = 0 Query: 1 MVGGKFEIGPTAPTTWIVAFRSPRFEWTFRTTDLDKVTARLDYSTRTLRLEARSRCGR----RRIEVMMVAPPGSF-GPPLYVPTRGGFSCLPGCRESFTATAHIKAV---DEGGRGGGRRIVLEEVCEVPLAALELGGALQRL 137 + GG F IGP +P +W+VA+RSP +W FRTTDL +V + + R +RL SR R RR+ + + AP SF PP+ +PT GFS PGC ES A A +KA E GR G L E VPL ALE GG Q L Sbjct: 593 LTGGIFRIGPISPLSWVVAYRSPFVQWDFRTTDLHRVEYAISSAQRRVRLVCESRPDRHGYYRRLMIALEAPLWSFTDPPISIPTPEGFSDRPGCVESHVARADVKAFLVNQEDGRSG-----LIEQRTVPLCALEFGGMFQGL 731
BLAST of NO16G00710 vs. NCBI_GenBank
Match: XP_005836019.1 (hypothetical protein GUITHDRAFT_136224 [Guillardia theta CCMP2712] >EKX49039.1 hypothetical protein GUITHDRAFT_136224 [Guillardia theta CCMP2712]) HSP 1 Score: 77.0 bits (188), Expect = 5.000e-11 Identity = 61/156 (39.10%), Postives = 77/156 (49.36%), Query Frame = 0 Query: 1 MVGGKFEIGPTAPTTWIVAFRSPRFEWTFRTTDLDKVTARLDYSTRTLRLEA----------RSRCGRRRIE----VMMVAPPGSFGPP---LYVPTRGGFSCLPGCRESFTATAHIKAVDEGGRGGGRRIVLEEVCE----VPLAALELGGALQR 136 + GGKF+IG P TWIVAFR + FRTTDL +V AR S RT LEA RSR + V + A + ++VPT GF+ PGC ESF AT ++A GR RR E+ + + LAALE GG Q+ Sbjct: 365 VTGGKFKIGGLTPLTWIVAFRVSNTSFNFRTTDLHQVKARFSCSKRTFSLEAFNPFSPLLLSRSRFHLTALSAGDFVQIEANDANMNQDEQNVWVPTLQGFTNKPGCSESFAATVRVRAWK--GRHLQRR--NEDAPDFDESLRLAALEFGGEFQQ 516
BLAST of NO16G00710 vs. NCBI_GenBank
Match: OLP85180.1 (putative peptidase C1-like protein [Symbiodinium microadriaticum]) HSP 1 Score: 71.6 bits (174), Expect = 2.100e-9 Identity = 44/131 (33.59%), Postives = 61/131 (46.56%), Query Frame = 0 Query: 1 MVGGKFEIGPTAPTTWIVAFRSPRFEWTFRTTDLDKVTARLDYSTRTLRLEARSRCGRRRIEVMMVAPPGSFGPPLYVPTRGGFSCLPGCRESFTATAHIKAVDEGGRGGGRRIVLEEVCEVPLAALELGG 132 + GG F + +++A+RSPRF W FR+ DLD + + E+ + AP GSF PLY PTR G+S PG ES+ +K G VL+E+ E+ ALE GG Sbjct: 2894 LTGGAFTVAELTARQFLLAYRSPRFHWDFRSVDLDHIVTQ---------------------ELTVSAPLGSFSEPLYFPTRKGWSNRPGSVESY----RVKIFHRG--------VLQEMLELQQTALEFGG 2991 The following BLAST results are available for this feature:
BLAST of NO16G00710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 4
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G00710 ID=NO16G00710|Name=NO16G00710|organism=Nannochloropsis oceanica|type=gene|length=556bpback to top protein sequence of NO16G00710.1 >NO16G00710.1-protein ID=NO16G00710.1-protein|Name=NO16G00710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=137bpback to top Synonyms
Publications
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