NO16G00700, NO16G00700 (gene) Nannochloropsis oceanica

Overview
NameNO16G00700
Unique NameNO16G00700
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1242
Alignment locationchr16:240682..241923 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:240682..241923 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016181Acyl_CoA_acyltransferase
IPR000182GNAT_dom
Homology
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BLAST of NO16G00700 vs. NCBI_GenBank
Match: EWM24055.1 (hypothetical protein Naga_100063g23 [Nannochloropsis gaditana])

HSP 1 Score: 206.1 bits (523), Expect = 2.100e-49
Identity = 145/415 (34.94%), Postives = 198/415 (47.71%), Query Frame = 0 
Query:   30 ITLPPATHPSTQPTLIRFKRHALRRALHLAGRRLLPFLFSGWVDEWLERRWVEGEKAWERELLVLANDWQEKDNERIQGKGIGKVTE-----WVVEGPQPLPATVKNDNVPSSFPPASCSS--PFVLFRAPLNKRERMKKALTRLSAILRSIFLPPILFGARNSRNGGRGAMEDEEIQEWRLY------------AAARAEREVXXXXXXXXXXXXXXXXXXVVLGKIGIKFRIPETRTITAVDRAGAALFKWEEAEEEVXXXXXXXXXXDEMKGSEGGVLKMRTVGVKVGGGECAGGGLRPLPVVVLVWCYVPPEARGRGYGEKMMEMVSEALLGE-KEEKEEHGLGNWRTRK-------------RGRERRGYILLTVDDNGSGRLTGYYQRLGFRMAPSLSSEACEVMLRPI 412
            + +PPA+  + +P L RF R    RA HL  R   PF    WVD  LE+RWV+G++ W ++L +LA + +                      W V GP    A + +    S+ P ++ SS  P  L +AP+ +  R+ + + RL + LRS+  P +LFG   +R  G     D +IQEW LY                +  E                   ++LGK+GIK ++P     +AV  AG ALF                                       GG E A GG  PLPVVVLVWC+VP E RGRG G  M++MV EA++G  ++E EE G   W  ++             +GR RRGY++LTVDDNGSGRL  YY  LGFR+APSLSS+ C++MLRPI
Sbjct:   45 LEIPPASDQACRPILRRFTRRVTFRAWHLIWRHRFPFFLPAWVDARLEKRWVDGQEDWLQDLHILARETEXXXXXXXXXXXXXXXXXXXHRIWSVTGPSRYLAPLDHAEASSTSPSSTMSSFVPLSLRQAPVPRPRRLGQTVRRLRSTLRSMLRPSLLFGVERTR-VGLSTRGDGDIQEWHLYGLRCREGTVQKEGRVESAAEKESTGRTTKRRAERRGEQNILLGKMGIKVKLPGIGGPSAVYDAGRALF-------------------------------------GEGGKEGAEGG--PLPVVVLVWCFVPVEFRGRGIGRVMIDMVEEAVVGRGRKEGEEDGGAGWEEQEPKDALTPPLEAKGKGR-RRGYVMLTVDDNGSGRLWQYYHALGFRIAPSLSSDDCQIMLRPI 418
The following BLAST results are available for this feature:
BLAST of NO16G00700 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM24055.12.100e-4934.94hypothetical protein Naga_100063g23 [Nannochlorops... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL150nonsL150Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003058NSK003058Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G00700.1NO16G00700.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|593233gene_5949Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100063g23gene6413Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G00700.1NO16G00700.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G00700 ID=NO16G00700|Name=NO16G00700|organism=Nannochloropsis oceanica|type=gene|length=1242bp
ATGGCCTTCTTGGCTCCCGTTCCCGCTACTCCAATTTGCCATCCCTACTC
CTTCTCGTCCCTTCTCGCCACAAAGGAGTCGGCCAGCATCACACTTCCTC
CTGCGACCCATCCCTCCACCCAACCCACCCTCATTCGTTTCAAACGGCAT
GCGCTCCGTCGGGCGTTGCACCTGGCCGGGCGACGGCTCCTTCCGTTTCT
GTTTTCCGGGTGGGTGGACGAATGGTTGGAACGTCGATGGGTAGAAGGGG
AAAAGGCATGGGAACGGGAGCTCCTGGTCTTGGCGAACGACTGGCAGGAG
AAAGACAACGAAAGGATTCAGGGGAAAGGAATAGGGAAAGTGACAGAGTG
GGTGGTTGAAGGCCCCCAGCCTCTGCCTGCAACTGTAAAAAATGACAACG
TCCCTTCTTCCTTCCCCCCCGCATCTTGCTCCTCCCCCTTCGTCCTTTTC
CGTGCACCTCTAAATAAGCGCGAAAGAATGAAGAAGGCTTTAACGCGATT
AAGCGCCATTCTCCGATCCATTTTTCTGCCGCCCATCTTGTTTGGTGCGA
GGAATTCGAGGAATGGAGGGAGGGGTGCGATGGAAGACGAGGAGATCCAA
GAGTGGCGCTTGTATGCGGCCGCGCGTGCGGAGAGAGAGGTAAATAGGAA
AATGAGAAGAAGAATTCAAAAGAAAGGAGAAGGAGATGGTGAGGGGGTAG
TACTGGGTAAGATAGGAATCAAATTTCGAATCCCCGAAACGCGGACAATC
ACGGCGGTGGACCGAGCGGGGGCTGCGTTGTTTAAGTGGGAGGAGGCAGA
GGAGGAAGTGGTGGAGGAGGAGGTGGAGGAGTTAGTGATAGATGAAATGA
AAGGAAGTGAAGGGGGAGTGCTCAAAATGAGAACTGTCGGCGTGAAGGTA
GGTGGAGGGGAGTGTGCGGGCGGAGGCTTAAGGCCTTTGCCGGTGGTTGT
GTTGGTGTGGTGTTATGTCCCGCCCGAGGCTAGAGGGCGGGGATATGGGG
AGAAGATGATGGAGATGGTGAGCGAGGCATTGCTTGGAGAGAAAGAAGAG
AAAGAGGAACACGGACTCGGAAACTGGAGGACGAGGAAAAGGGGGAGGGA
GAGAAGAGGATATATTCTGTTGACTGTTGATGATAATGGGAGTGGGAGGT
TGACGGGGTACTACCAAAGGTTGGGCTTTCGCATGGCACCGTCCTTGTCG
AGTGAGGCGTGTGAAGTGATGCTGCGGCCCATCATAATGTAG
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protein sequence of NO16G00700.1

>NO16G00700.1-protein ID=NO16G00700.1-protein|Name=NO16G00700.1|organism=Nannochloropsis oceanica|type=polypeptide|length=414bp
MAFLAPVPATPICHPYSFSSLLATKESASITLPPATHPSTQPTLIRFKRH
ALRRALHLAGRRLLPFLFSGWVDEWLERRWVEGEKAWERELLVLANDWQE
KDNERIQGKGIGKVTEWVVEGPQPLPATVKNDNVPSSFPPASCSSPFVLF
RAPLNKRERMKKALTRLSAILRSIFLPPILFGARNSRNGGRGAMEDEEIQ
EWRLYAAARAEREVNRKMRRRIQKKGEGDGEGVVLGKIGIKFRIPETRTI
TAVDRAGAALFKWEEAEEEVVEEEVEELVIDEMKGSEGGVLKMRTVGVKV
GGGECAGGGLRPLPVVVLVWCYVPPEARGRGYGEKMMEMVSEALLGEKEE
KEEHGLGNWRTRKRGRERRGYILLTVDDNGSGRLTGYYQRLGFRMAPSLS
SEACEVMLRPIIM*
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Synonyms
Publications