NO16G00550, NO16G00550 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G00550 vs. NCBI_GenBank
Match: EWM24061.1 (Trypsin Inhibitor-like, cysteine rich domain protein [Nannochloropsis gaditana]) HSP 1 Score: 155.2 bits (391), Expect = 4.800e-34 Identity = 152/472 (32.20%), Postives = 217/472 (45.97%), Query Frame = 0 Query: 1 MRVQRHLICVVAFLSTGSLLSSXXXXXXXXXAQRIRGGSSTTNHAVETGTAVNVPVAQPQETAPDAILAVSETIKGVNSNNKARVTIRRKEDANKPPAHTSEELQQHPMPLQEMTLLVNKQQQPRQDDTVAVAIDPPVVPAFAAGEPNPSAPHXXXXXXXXXXD---FERRATHGVEXXXXXXXXXXXXXXXXXXSSNELPVDVHQHDENHSSKKLTLKEFLIKFGEDGRKGK---RPAGSAAIAGGDGGIGVSVRNEPDKRRDEEREEAKDVSGKKKEEPKQGEGEIRAV-GDDRSAAGTVAAGTVKIGGLRGTIQHAEAEAIELEGDIKEATKRL--RVAGGGEQQKD-EYMKSNAFRERKAGENDEDDGPPGTPRTDRPASGSVEEVRKECTGGMVYSECGRPCTATCEHPRPVCPAVCMPRCHCPSAKPIWNGDTCIEETECHL---SNEGEEDGEG-APARSLRGAK 459 M+ +RHL C A L+ G+ L+ AQRIRG ST VPV ++ D V+E GV K RV IRRK DA+K + +E + H Q + VNK + R ++ P A GEPNP+A + R G + +N + + ++TLKE+L+++GE+GR+G+ + G+A+IA D + P + + + S K E P E A G + S + +A T GL G A E + +++E TKR+ R A G ++ D + R R G+ DE +G + +VEEVR EC GGMVYS+CGRPCTATCEH RPVCPAVC+ RCHCP KPIW+G+ C+EE +C L ++ +EDG ++LRGA+ Sbjct: 1 MKARRHLTCFAALLAMGAFLTD---NAPLAEAQRIRGSVSTEKADAIPAAGPAVPVQDAAPSSADLSTTVNE--DGV-PKTKVRVNIRRK-DASKEAQNGLQE-EGH----QTHHVYVNKMEVKR--------LEEPPATGIAVGEPNPAASQHHTHHAHFEFQQRTMQSRVQEGADVREAKDELKERGIGGATHDNNHNEILDTASESETGLNRMTLKEYLLEYGEEGRRGRKNQKSPGAASIAATDK--AGARTTTPAMKTHTTQSLSSMPSPNKVESPVDSTREGAATEGTELSPVPSESAPTK--NGLAGM-------ADETKHNVQEVTKRIRKRAAEPGRERGDIDPADLEEIRARAVGDEDE-EGVEAEDAAAQVPGNAVEEVRPECPGGMVYSDCGRPCTATCEHLRPVCPAVCVARCHCPHDKPIWDGENCLEEAQCRLKAKADGNQEDGANKMSGKALRGAR 440
BLAST of NO16G00550 vs. NCBI_GenBank
Match: EWM24062.1 (Trypsin Inhibitor-like, cysteine rich domain protein [Nannochloropsis gaditana]) HSP 1 Score: 131.0 bits (328), Expect = 9.700e-27 Identity = 99/257 (38.52%), Postives = 141/257 (54.86%), Query Frame = 0 Query: 213 LTLKEFLIKFGEDGRKGK---RPAGSAAIAGGDGGIGVSVRNEPDKRRDEEREEAKDVSGKKKEEPKQGEGEIRAV-GDDRSAAGTVAAGTVKIGGLRGTIQHAEAEAIELEGDIKEATKRL--RVAGGGEQQKD-EYMKSNAFRERKAGENDEDDGPPGTPRTDRPASGSVEEVRKECTGGMVYSECGRPCTATCEHPRPVCPAVCMPRCHCPSAKPIWNGDTCIEETECHL---SNEGEEDGEG-APARSLRGAK 459 +TLKE+L+++GE+GR+G+ + G+A+IA D + P + + + S K E P E A G + S + +A T GL G A E + +++E TKR+ R A G ++ D + R R G+ DE +G + +VEEVR EC GGMVYS+CGRPCTATCEH RPVCPAVC+ RCHCP KPIW+G+ C+EE +C L ++ +EDG ++LRGA+ Sbjct: 1 MTLKEYLLEYGEEGRRGRKNQKSPGAASIAATDK--AGARTTTPAMKTHTTQSLSSMPSPNKVESPVDSTREGAATEGTELSPVPSESAPTK--NGLAGM-------ADETKHNVQEVTKRIRKRAAEPGRERGDIDPADLEEIRARAVGDEDE-EGVEAEDAAAQVPGNAVEEVRPECPGGMVYSDCGRPCTATCEHLRPVCPAVCVARCHCPHDKPIWDGENCLEEAQCRLKAKADGNQEDGANKMSGKALRGAR 245
BLAST of NO16G00550 vs. NCBI_GenBank
Match: XP_013421565.1 (SCO-spondin-like [Lingula anatina]) HSP 1 Score: 73.9 bits (180), Expect = 1.400e-9 Identity = 31/60 (51.67%), Postives = 40/60 (66.67%), Query Frame = 0 Query: 378 EEVRKECTGGMVYSECGRPCTATCEHPRPV-CPAVCMPRCHCPSAKPIWNGDTCIEETEC 437 E VR+ECTGG V+ CG PCT TC P+ + C A+C C CPS PIWN +CI++ +C Sbjct: 59 EPVREECTGGRVWKVCGSPCTLTCHTPKDMGCIALCRRGCECPSTAPIWNNGSCIKKEDC 118
BLAST of NO16G00550 vs. NCBI_GenBank
Match: XP_013421564.1 (uncharacterized protein LOC106181663 [Lingula anatina]) HSP 1 Score: 72.0 bits (175), Expect = 5.400e-9 Identity = 30/60 (50.00%), Postives = 39/60 (65.00%), Query Frame = 0 Query: 378 EEVRKECTGGMVYSECGRPCTATCEHPRPV-CPAVCMPRCHCPSAKPIWNGDTCIEETEC 437 E VR+ECTGG V+ CG PCT TC P+ + C A+C C CP PIWN +CI++ +C Sbjct: 59 EPVREECTGGRVWKVCGSPCTLTCHTPKDMGCIALCRRGCECPRTAPIWNNGSCIKKEDC 118
BLAST of NO16G00550 vs. NCBI_GenBank
Match: XP_013402545.1 (zonadhesin-like isoform X2 [Lingula anatina]) HSP 1 Score: 71.2 bits (173), Expect = 9.100e-9 Identity = 32/83 (38.55%), Postives = 46/83 (55.42%), Query Frame = 0 Query: 376 SVEEVRKECTGGMVYSECGRPCTATCEHPRPVCPAVCMPRCHCPSAKPIWN--GDTCIEETECHLSNEGEEDGEGAPARSLRG 457 +V V K C GGMV+ ECG PCT TC P P+C +C P+C CP+ + +W+ + C++ EC S E + P +G Sbjct: 156 TVASVDKTCVGGMVWKECGSPCTRTCSEPSPMCIEMCAPKCECPNGQ-VWHEKKEQCVDMAECSTSVTEPEPADQCPEGCPKG 237
BLAST of NO16G00550 vs. NCBI_GenBank
Match: XP_013391191.1 (mucin-5B isoform X3 [Lingula anatina]) HSP 1 Score: 70.5 bits (171), Expect = 1.600e-8 Identity = 29/66 (43.94%), Postives = 41/66 (62.12%), Query Frame = 0 Query: 376 SVEEVRKECTGGMVYSECGRPCTATCEHPRPVCPAVCMPRCHCPSAKPIWN--GDTCIEETECHLS 440 +V V K C GGMV+ ECG PCT TC P P+C +C P+C CP+ + +W+ + C++ EC S Sbjct: 156 TVASVDKTCVGGMVWKECGSPCTRTCSEPSPMCIEMCAPKCECPNGQ-VWHEKKEQCVDMAECSTS 220
BLAST of NO16G00550 vs. NCBI_GenBank
Match: XP_013402544.1 (balbiani ring protein 3-like isoform X1 [Lingula anatina]) HSP 1 Score: 70.5 bits (171), Expect = 1.600e-8 Identity = 29/66 (43.94%), Postives = 41/66 (62.12%), Query Frame = 0 Query: 376 SVEEVRKECTGGMVYSECGRPCTATCEHPRPVCPAVCMPRCHCPSAKPIWN--GDTCIEETECHLS 440 +V V K C GGMV+ ECG PCT TC P P+C +C P+C CP+ + +W+ + C++ EC S Sbjct: 156 TVASVDKTCVGGMVWKECGSPCTRTCSEPSPMCIEMCAPKCECPNGQ-VWHEKKEQCVDMAECSTS 220
BLAST of NO16G00550 vs. NCBI_GenBank
Match: XP_013385177.1 (zonadhesin isoform X1 [Lingula anatina]) HSP 1 Score: 70.1 bits (170), Expect = 2.000e-8 Identity = 28/59 (47.46%), Postives = 38/59 (64.41%), Query Frame = 0 Query: 384 CTGGMVYSECGRPCTATCEHPRPVCPAVCMPRCHCPSAKPIWNGDTCIEETECHLSNEG 443 C+GG +Y++CG CTATC + RP C C+PRC CPS +PI CI+E +C + G Sbjct: 347 CSGGQIYTQCGSACTATCINRRPRCTQSCVPRCQCPSYRPINYNGLCIQENQCPPGSSG 405
BLAST of NO16G00550 vs. NCBI_GenBank
Match: XP_013391189.1 (zonadhesin isoform X1 [Lingula anatina]) HSP 1 Score: 70.1 bits (170), Expect = 2.000e-8 Identity = 34/73 (46.58%), Postives = 42/73 (57.53%), Query Frame = 0 Query: 384 CTGGMVYSECGRPCTATCEHPRPVCPAVCMPRCHCPSAKPIWNGDTCIEETEC---HLSNEGEED---GEGAP 451 CTGG + ECG CTATC+ P P+C +C RC CPS+KPI++ C E +C HL E E EG P Sbjct: 222 CTGGQEWFECGMSCTATCDEPNPICNRMCAARCQCPSSKPIFHDGVCKELKDCPGVHLVPEPEPTDHCSEGCP 294
BLAST of NO16G00550 vs. NCBI_GenBank
Match: XP_013391190.1 (balbiani ring protein 3 isoform X2 [Lingula anatina]) HSP 1 Score: 70.1 bits (170), Expect = 2.000e-8 Identity = 31/69 (44.93%), Postives = 40/69 (57.97%), Query Frame = 0 Query: 384 CTGGMVYSECGRPCTATCEHPRPVCPAVCMPRCHCPSAKPIWNGDTCIEETECHLSNEGEED--GEGAP 451 CTGG + ECG CTATC+ P P+C +C RC CPS+KPI++ C E +C + D EG P Sbjct: 222 CTGGQEWFECGMSCTATCDEPNPICNRMCAARCQCPSSKPIFHDGVCKELKDCPVPEPEPTDHCSEGCP 290 The following BLAST results are available for this feature:
BLAST of NO16G00550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 19
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G00550 ID=NO16G00550|Name=NO16G00550|organism=Nannochloropsis oceanica|type=gene|length=6743bpback to top protein sequence of NO16G00550.1 >NO16G00550.1-protein ID=NO16G00550.1-protein|Name=NO16G00550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=459bpback to top Synonyms
Publications
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