NO16G00510, NO16G00510 (gene) Nannochloropsis oceanica

Overview
NameNO16G00510
Unique NameNO16G00510
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3574
Alignment locationchr16:178001..181574 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:178001..181574 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO16G00510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL150nonsL150Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G00510.1NO16G00510.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G00510.1NO16G00510.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G00510 ID=NO16G00510|Name=NO16G00510|organism=Nannochloropsis oceanica|type=gene|length=3574bp
GCCTCTACCAACCGAAAGAGGAGCGAAAGTTTCCACCTCCGTTGTCCGTT
TCTAGGCGTGTGAACACGTCTTCGAAAAAGCAGCACGGTACCGGTCAAGG
GGCATGCATCACGTACAGTTCAGTGAATGACAGGGCGTACCGCGGGTGTG
TGTATATAGTGTGAGCGCAAAAAAGACATCATACGTCAACTCGATTATAT
CACATATCGCTCGGGATACGTGACTCCCCCCTTGTTTTTTTCCGACTCAC
ATCCTTTCATTTCTCCACTCACCGCGCCACAAGTGCTATAGCAGGGGCAT
CGCGCCCCATCGCACTTAAGCCCCGGGCGGTGCGGGCTTTGGTCCAAATT
CTGGTCCGAACGTATTGAATTTTAACCGAGTTTGCAAGATCCCGCCCAAA
AAAACATGGCCCGGACCACGATCCACCTGCCGAATGGAGGCCAACCTATG
GAAGGGACAGCAGCCAAACCCTCAGCAGCAGCGACAATTCCACCATCGCC
ACCTCTTCTTGGACCTCTAAAACTTGCCTCGCCGCCGCAACCACCACAGC
CACCATTGCAGCAGCAGCATTGTCCCTCCCCATCCCACAAGTCTCCCTCC
AAGATCGCCTCACCCCCTACCCTCTCCTCCCCCCCTCCTCCTCTCCCTCT
TATTCCTCCTCTTCCTCCTTCATCTCATTCCTAGCCCGTCGCCGGTCGCC
CTCGTGTATGGAGGAGCGGCTGCAGCTGCAGCAGCACCAGCAGCAGGAGG
AAGACCCCCAAGTGATTGTCTTTTGTCCACGAGTAGAAGAAGAGAAGGGA
AACGGAGGGGATGGAGAAAATGTGGGAAGAGAACCTTCTGCCCTGTTGGC
GCATACTGTCGTCAGGGATGATTATTTTGCCATCGCTCCTACTACCATTA
CCAACATCAACAGCAGCAACAGCAGCAGCAGCTGCATTAGGAACACCACG
ACCACCATCACCGCCAGCAGCTGCAGCAGCGGTAGCAGCAGTGGCAATAG
CGATAAAAATGAGGTATTTCCCGTCGGAGGAGAGTCTATGCTCGCCCCAC
TCTCGCCCTCGGTTTTTTTCCCGGTAGGTGAGGAGGCAGGGAAGGAAAAA
GGGGGGGAGTTAGCGGCGGTGGTGAAATTGATTTGTAGCCAAGGGGAGGA
AGGAAGGAAAGAGGAAAGGAGAGAAGAGAGAGAGACGAGAGGGATAGTGT
CCAATTCATCTTTTGAGATTCTTTTGATGGAGCCTGCTTCAAGCATGAGG
GGGAACGGGGAGCCGGAAGTAGAGGAGGAGAAGGAGGGGGAGGGGAAGAA
GAAGAAGACGACGACGGAAACGAAGGAAAAGAAGGACGAGGACAACGAGG
TGAGGGAACGAGAAGAGGGATACGAGAAGGAAGGGGAAGAAGAGGGGATG
CGATTTACTCCCGAGTCTGTCTTCATAACACCCTGTAGGGGGGGCGAGGA
GGAGGAGGAACAGGAGGAGGAGGAGAAGGACGAGGAGAGAGAGGAGGGGA
AGGGAGGGAGGAGGAGGACAAATGGAAAGAATCTGCTTTCTTCACTCTCT
CCTTCTCTTGCCGCCGACGTGGACACGTTGGCTACGACCGTTTTAATGGG
GAGGAAGGAGGAGGGAGAGGAAGGGGAGGAGGACAAGGAGAGAGGGGGTG
GAAGGAACCTGTTTTCCTCTCCGTCCCCCGTGCATGACGCTCCCAAAACG
AAGACGGCAAACTTGACATGGACAAAGGAGAAGGGAAAGGAGGGGAGGGA
AGTGGTGAAGGGTCAACAACTACTGCTACAGCAGCAACAACCATCCCAAC
AGCAGAAGCACCACCACTACCACCAGCACCACCAGCGGGAGCAACAGCAG
CAGCAGCAGCACAAATTTCCTCTCAAAAGACAGCAGCAGCCGCAGCAAAA
CCAGCAGCACCAGCACAAGAATCTGAATTTAGATCGACTGCATAGGCCGG
CCGCTGCCATTGATTTTCAAACGGTTGCAGTCCGTCGTCGTCTTCCTCGA
AAAACCAACGGCTTCATCTCCCCGGCACTCTCCGAGGTGGAGGGAGGGGG
GAAGGGACGAGAGGAGGGGACTGGAGGGCTGGAGGTCACATTTCCAGCGT
TGGGGGAAGGCAAGAAGAAGAGAAGGCTTTTGGTGCCGATCGAGGAGGGG
GAGGACGAGAGGGAGAGGAGGGAGGGGTGGATGGAGGAGCTGTGGTCGAC
GTCACGGGGCGAGCCAGCGCGGGTGCAGGCGCTCTGGGACTCGTTTTGGA
TGACGACCTCCTCGGCTGGACATACATTCCCTGTGTCTGGTTGTTGTCGG
AAGGAAGTGGGAGGAAGGGAGGGAGGGAGGGAGGGAAAGAGTGTGGGTGT
GGGTGTCAGGAAGGAGTGGGGACGAAATGGAGGGGAGGGGGAGGGGGAGG
ATGAGGTGGAAGAGAGGGGGGAGGATGAGGTGTTGGAGGAGGAAAAGAAA
GGTTATGCCGTGGCACGACCGGAGGGAGTCAAGTGTGGCGGGGAGTTTGA
TGGAAAGGGGCAGCAGCAGCAGCAGCAGCAGTACGACAAACATCTCTCTC
ATCATCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG
CAAGAGCGGCTGATGGAGAAGGTGGAGGAGAAGGGTGAGATGATCACCTT
TCGACGGCGTCCTTCTTCTCTGCCCCTCCTTCGCTACCCATCTGCTGACA
TAGCTGGTGCGGCTGGTATGGCTGCTGCGGAGGTTGCAGCGGTATCGGGT
CAGCAGATGGCGCAGGGGAAGAAGGAAGAAGCTATGAGGCAAGGGGAGGA
CGGTAGGAGGGAGGGCGAGGACAAGGACGAGGACGAGGACGCGAAGGTGG
AGGCGGTAATGACAGGTGGAGCTACCATAAGGCCTCGATCCGAAGACAAA
GAGAAGCAGGACAAGGAGGAGGACGAGGAGGAGGGCGAGGAGGAGGAAGG
CCTGTACGCTAGCATTGTGAGCACGGAGACGTATGCCACGGTATCTGACT
CGATGTTTTCTTCGTTTCTCTCGACTGCCTCTCCTACTGCTCCTCCTTCC
CTTTATTTCTTGCGGGCGTTTTCGGTCGAAGGGAGCGCTGATGGGTGCAG
TAAAAGAAGGGCAGGAGGAGAGGAACGAGGAGAAAGAGGGTTGGAGGGGC
GGATCTCTCTTTCCCTTTCCTCGCCTGAACCGGACGATGGGGAAATGGCC
TTCCAAGAGAGGGGGGGGGGGGAAGAAGAAGAGGAGGAGGAGCAGGAAGA
GGAGGAGGAGGGATGGGAGGAAGAGGGGGGGAGGACACGGAGGAAGAAGA
GGGCGCCGCTGTTGATTGACGTGGGAGGTGGAGAAGGTGAAGAGGAATGG
AGGGAGGGGGAGAGGAAGGGAGGGAGGGAGGGAGAGAGGAGTAACAGCCC
GAATGCGTTTTTAACAAGGGTGACGACGAACACGGATTGGATCCTGTGAT
ATGGAGAGGAGGGGGTGAAGGAGTGGCAGGCAAACACACACGCGCATAAG
TATACATATACATATACCGACAGAGCGATCACCCCAAACGCAGACCATAA
AACAACAAAAACACTAGATAAGAT
back to top

protein sequence of NO16G00510.1

>NO16G00510.1-protein ID=NO16G00510.1-protein|Name=NO16G00510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=914bp
MEERLQLQQHQQQEEDPQVIVFCPRVEEEKGNGGDGENVGREPSALLAHT
VVRDDYFAIAPTTITNINSSNSSSSCIRNTTTTITASSCSSGSSSGNSDK
NEVFPVGGESMLAPLSPSVFFPVGEEAGKEKGGELAAVVKLICSQGEEGR
KEERREERETRGIVSNSSFEILLMEPASSMRGNGEPEVEEEKEGEGKKKK
TTTETKEKKDEDNEVREREEGYEKEGEEEGMRFTPESVFITPCRGGEEEE
EQEEEEKDEEREEGKGGRRRTNGKNLLSSLSPSLAADVDTLATTVLMGRK
EEGEEGEEDKERGGGRNLFSSPSPVHDAPKTKTANLTWTKEKGKEGREVV
KGQQLLLQQQQPSQQQKHHHYHQHHQREQQQQQQHKFPLKRQQQPQQNQQ
HQHKNLNLDRLHRPAAAIDFQTVAVRRRLPRKTNGFISPALSEVEGGGKG
REEGTGGLEVTFPALGEGKKKRRLLVPIEEGEDERERREGWMEELWSTSR
GEPARVQALWDSFWMTTSSAGHTFPVSGCCRKEVGGREGGREGKSVGVGV
RKEWGRNGGEGEGEDEVEERGEDEVLEEEKKGYAVARPEGVKCGGEFDGK
GQQQQQQQYDKHLSHHQQQQQQQQQQQQQQQQERLMEKVEEKGEMITFRR
RPSSLPLLRYPSADIAGAAGMAAAEVAAVSGQQMAQGKKEEAMRQGEDGR
REGEDKDEDEDAKVEAVMTGGATIRPRSEDKEKQDKEEDEEEGEEEEGLY
ASIVSTETYATVSDSMFSSFLSTASPTAPPSLYFLRAFSVEGSADGCSKR
RAGGEERGERGLEGRISLSLSSPEPDDGEMAFQERGGGEEEEEEEQEEEE
EGWEEEGGRTRRKKRAPLLIDVGGGEGEEEWREGERKGGREGERSNSPNA
FLTRVTTNTDWIL*
back to top
Synonyms
Publications