NO16G00460, NO16G00460 (gene) Nannochloropsis oceanica

Overview
NameNO16G00460
Unique NameNO16G00460
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1862
Alignment locationchr16:165113..166974 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:165113..166974 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO16G00460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G00460.1NO16G00460.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G00460.1NO16G00460.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G00460 ID=NO16G00460|Name=NO16G00460|organism=Nannochloropsis oceanica|type=gene|length=1862bp
AGTCTGGAACGGCAATCAAAAACGTTGATATAAATAAACTACCGTTGGGA
CTTCCCTGGCGCGGATAGCACGGCCTCAAGACGACAACAAAGACGAGCAT
TGGGTGCAGTAGCAACAGGCTGCGGTGATGTCTGTGCTTGGAAAGTGTGG
GGCTGGGTGGCTCATGGCTATCTGCCCTTTCTCTCCAACGGTATGAATAC
CTCGTTCGGAGCCGAACAATTTTAATCTTTTCGCATCGTACGGCCTAAAC
ATAGGAGCACCTTCACTATACAGGCAACATAAGCCATGATGTCCGATAGA
TAGCGCCAACCTGCGTGCTTACGGCCAACCCCTCAAGTCGAGCCGGGCAT
GATTGATCTCACATAGTCCTCGGGGGACGAGGAGGGGGTCTTGGTACCTA
GCAACAACTGTAATAACAATGGTGGTGGTGATGAGGATGGTAATGGCAGC
AATCGGAAAAAGGAGCGGAAGCGAGAGTGTATCTCATCGAAAATCCCAAG
CAAATGTGACGATGAATATGAAAGTCACGATGGTCGCGCCGCTGCTACTG
CTGCCTCTGCTAGCGGTCGTCCAGGTACCGTATTTCGAACGGCCCGGGCT
GCCAAAAAGATGAGAAGGGTCACAATATGAGCGTAAGCAATTGGGCCCAT
GGCTCCTCCTCCTCAATTGAACCGCTGCATGCCTCCTCCGCCCCTTCCTC
CTTTTCGGCTACAATCTTGGCACCGGCTGGGGCTGCTGCTGAGGCGGCGA
CGGTAGTGGATGCACCATCTTCCTTCCCGCCCGTCCTCTATTTCCCTTCA
ATATCGTTGATGAGGAGGGAAAAGACGGCCTCGGCGATGAGGGAAGGAAA
GCGGAATCTGGAAGGTATGTCGCCAGAGGCGGAGGACGATGAGGAGATTG
GAAAGGAAGGAGAGGATGGTGATAGTGGTGGGGGGAAAGAGGGAGGCGCA
GTAGGAGCGGGGGAACACAAAGGGGTAAGAGAAGGAAAAGGAAATGGTTG
TTGGAGCGGCGATGGTATTAGAGGCAAATTGCAACTGCTGCAGCAGCAGC
AGCAGGAGCAATTCGTTAGCGAGGACGGTCATGGATGGAAGGAGGTGGAA
GAGCGGTTCATCTTGCATGACTCCTTCTTGACTTGTGGAGAGGGAGGGTT
GGAGGGTGGAGAAGGACAGCAGGGGCAAGAGGAGGGAGGAATAGAGGTGG
AGGTAGAGGGCGAGGAAGGGAGGAAAGAAGGGGAGGGGATAGGAGTGGGC
GTAGACGGGTTTGGGAATGGGGGCTTTCCGGCGACACCAGAAAAAGAGAC
TGCCCAGACTAAGGAGGGCGCAGACGCCGACAAGGAGGAGAGGGAGGAGG
TAAAGGGAAAGACAGGGGTGATGAGAGAGAAGGAGGAAGAAATTGGCCGT
AGGCTGGAGCCTCAAGCGAAGCGAGTGGCGGCGGCGGCGAAAGAGGAGCT
GGAGGAGGAGGAGGTGAACGACGAGGACGAGGGCGAGGACGAGGACGAGG
AGGCGCAGGAGGGGGAGGCGCAGGAGGAGGAGGGGAATGAGGAAAAGGAG
GAGGCGCAGGAGGAGGAGGGGAATGAGGAAAAGGAGGAGGCGCAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGCAGGAGCAGGAGCAGGAGCAGGAGGAGGAAGAAGAAGAGGAGGTGGAG
GAGGAGGAAGGGGACGGGATACAAGCAGGGGTTGACGTGAAGGGGAACCA
CGGGCCGCTACAGCTGGTGACAGCCCCGGCTGCAGGGACTGAGGGAGAGA
GGGAGAGAGAACTAGAGCGGTATCTGTCCCTGCTGAGACGCATGAAACCC
CACATATTATGA
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protein sequence of NO16G00460.1

>NO16G00460.1-protein ID=NO16G00460.1-protein|Name=NO16G00460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=412bp
MSVSNWAHGSSSSIEPLHASSAPSSFSATILAPAGAAAEAATVVDAPSSF
PPVLYFPSISLMRREKTASAMREGKRNLEGMSPEAEDDEEIGKEGEDGDS
GGGKEGGAVGAGEHKGVREGKGNGCWSGDGIRGKLQLLQQQQQEQFVSED
GHGWKEVEERFILHDSFLTCGEGGLEGGEGQQGQEEGGIEVEVEGEEGRK
EGEGIGVGVDGFGNGGFPATPEKETAQTKEGADADKEEREEVKGKTGVMR
EKEEEIGRRLEPQAKRVAAAAKEELEEEEVNDEDEGEDEDEEAQEGEAQE
EEGNEEKEEAQEEEGNEEKEEAQEEEEEEEEEEEEEEEEEEEQEQEQEQE
EEEEEEVEEEEGDGIQAGVDVKGNHGPLQLVTAPAAGTEGERERELERYL
SLLRRMKPHIL*
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Synonyms
Publications