NO16G00340, NO16G00340 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G00340 vs. NCBI_GenBank
Match: OLP86696.1 (Integral membrane protein [Symbiodinium microadriaticum]) HSP 1 Score: 173.7 bits (439), Expect = 9.300e-40 Identity = 101/266 (37.97%), Postives = 145/266 (54.51%), Query Frame = 0 Query: 91 FTNIYKSADWGTSPSSHTRSGSGSTITGAFETITKLEPKFRELNITAIADVPSGDCGWQFALSTINAADAYFGGDITPHVAQENAQIFHNHLNKVFAFWDLVECPIPQWYTTCDSTPRPFDIVIVRDVIQHMRLNNAARAIKLIVEESGASYMAVTSF--------------STERCTDQ-------------CLTA-------------LQSDGGFYHNNLHCPPWNFPEPFYSFPSHDNFPEEADHMELYRVDDLKTIVANWQE 317 F +++K+ WG S S T SG+GS GA++ + + + NI +AD+P GD WQF++ IN A AYFGGDI+ VA+ NA+ + +H+NK+F WDL+EC +PQ S+ PFD+VI RD IQHM + + A+K IV SGA Y AV+S+ S++R Q C T+ + G +Y N + C P+NFP P PSH+ F E DH+++YRVDDLK++ +W E Sbjct: 254 FDHVHKTNSWG-SDSRITTSGTGSDQKGAYDWVYHINLFILQYNIQTVADLPCGDVAWQFSVPGINKAKAYFGGDISASVARRNAEQYTSHMNKIFRHWDLIECGVPQ--CCRGSSCAPFDLVITRDAIQHMTVFDGLLAVKSIV-HSGAKYFAVSSYLPGTVDRKWKSLGLSSQRAPGQPMGLRREDDYIRECQTSDELKRKFCKPGQRTEETGWWYPNVMRCFPFNFPPPIVDRPSHETFKIENDHLQIYRVDDLKSV--DWNE 513
BLAST of NO16G00340 vs. NCBI_GenBank
Match: WP_011381501.1 (hypothetical protein [Nitrosospira multiformis] >ABB75494.1 hypothetical protein Nmul_A2202 [Nitrosospira multiformis ATCC 25196] >SEG02322.1 Glycosyltransferase Family 4 [Nitrosospira multiformis ATCC 25196]) HSP 1 Score: 89.7 bits (221), Expect = 1.800e-14 Identity = 72/210 (34.29%), Postives = 91/210 (43.33%), Query Frame = 0 Query: 75 QLGSRCSAGRH--DVANRFTNIYKSADWGTSPSSHTRSGSGSTITGAFETITKLEPKFRELNITAIADVPSGDCGWQFALSTINAADAYFGGDITPHVAQENAQIFHNHLNKVFAFWDLVECPIPQWYTTCDSTPRPFDIVIVRDVIQHMRLNNAARAIKLIVEESGASYMAVTSFSTERCTDQCLTALQSDGGFYHNNLHCPPWNFPEP 283 Q GS+ H D + F IY W S +RSG GST+ +L P L + + D P GDC W+ T+ DAY G DI P + +EN Q F H N F DLVE D PR D V+ RD + H+ L + RA+ I SGA Y+ TS T T GG+ NL P+N P P Sbjct: 418 QDGSKAGENNHSADRVSVFEQIYVRNAW---QSPESRSGPGSTLERTEILRCELPPLLARLGVRTLVDAPCGDCNWR--QHTVIDLDAYIGVDIVPALIEENRQRF-PHSNWRFEVADLVE----------DDLPRG-DAVLCRDALIHLSLTDILRALSNI-RRSGAKYLLATSHETTSANTDIAT-----GGWRSVNLTLAPFNLPPP 604
BLAST of NO16G00340 vs. NCBI_GenBank
Match: WP_074774459.1 (hypothetical protein [Nitrosospira multiformis] >SEA37814.1 Glycosyltransferase Family 4 [Nitrosospira multiformis]) HSP 1 Score: 89.7 bits (221), Expect = 1.800e-14 Identity = 72/210 (34.29%), Postives = 91/210 (43.33%), Query Frame = 0 Query: 75 QLGSRCSAGRH--DVANRFTNIYKSADWGTSPSSHTRSGSGSTITGAFETITKLEPKFRELNITAIADVPSGDCGWQFALSTINAADAYFGGDITPHVAQENAQIFHNHLNKVFAFWDLVECPIPQWYTTCDSTPRPFDIVIVRDVIQHMRLNNAARAIKLIVEESGASYMAVTSFSTERCTDQCLTALQSDGGFYHNNLHCPPWNFPEP 283 Q GS+ H D + F IY W S +RSG GST+ +L P L + + D P GDC W+ T+ DAY G DI P + +EN Q F H N F DLVE D PR D V+ RD + H+ L + RA+ I SGA Y+ TS T T GG+ NL P+N P P Sbjct: 418 QDGSKAGENNHSADRVSVFEQIYVRNAW---QSPESRSGPGSTLERTEILRCELPPLLARLGVRTLVDAPCGDCNWR--QHTVIDLDAYIGVDIVPALIEENRQRF-PHSNWRFEVADLVE----------DDLPRG-DAVLCRDALIHLSLTDILRALSNI-RRSGAKYLLATSHETTSANTDIAT-----GGWRSVNLTLAPFNLPPP 604
BLAST of NO16G00340 vs. NCBI_GenBank
Match: XP_016612374.1 (hypothetical protein SPPG_00066 [Spizellomyces punctatus DAOM BR117] >KND04335.1 hypothetical protein SPPG_00066 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 88.6 bits (218), Expect = 3.900e-14 Identity = 64/203 (31.53%), Postives = 95/203 (46.80%), Query Frame = 0 Query: 89 NRFTNIYKSADWGTSPSSHTRSGSGSTITGAFETITKLEPKFRELNITAIADVPSGDCGWQFALSTINAADAYFGGDITPHVAQENAQIFHNHLNKVFAFWDLVECPIPQWYTTCDSTPRPFDIVIVRDVIQHMRLNNAARAIKLIVEESGASYMAVTSFSTERCTDQCLTALQSDGGFYHNNLHCPPWNFPEP-FYSFPSHD 291 N F +I+++ WG S RSG GST+ ++ +I D P GDC WQ + + + AY G DI P+V +N + + N F DL +P FD ++ RD IQH+ L + + I + SGA Y+ +T+F R + T ++ G FYHNN PP+NF P FY+ + D Sbjct: 86 NTFVSIFENNGWGNPES---RSGPGSTVRNTARIRNFIDTVINHFSIQTFLDAPCGDCNWQPGIPSFSKI-AYTGADIVPNVIIQNMRKYLYKPNMRFVNLDLAMDAVPH---------DAFDAILCRDAIQHLPLEDGLK-IYSNFQRSGAKYL-ITNFHDPRKGNFQNTNIK-PGDFYHNNPLLPPFNFSLPLFYTIDASD 272
BLAST of NO16G00340 vs. NCBI_GenBank
Match: WP_074703759.1 (methyltransferase domain-containing protein [Nitrosospira multiformis] >SES66220.1 Methyltransferase domain-containing protein [Nitrosospira multiformis]) HSP 1 Score: 85.9 bits (211), Expect = 2.500e-13 Identity = 69/197 (35.03%), Postives = 86/197 (43.65%), Query Frame = 0 Query: 86 DVANRFTNIYKSADWGTSPSSHTRSGSGSTITGAFETITKLEPKFRELNITAIADVPSGDCGWQFALSTINAADAYFGGDITPHVAQENAQIFHNHLNKVFAFWDLVECPIPQWYTTCDSTPRPFDIVIVRDVIQHMRLNNAARAIKLIVEESGASYMAVTSFSTERCTDQCLTALQSDGGFYHNNLHCPPWNFPEP 283 D + F IY W SS +RSG GST+ +L P L + + D P GDC W+ T DAY G DI P + +EN Q F H N F DLVE DS PR D V+ RD + H+ L + RA+ I SGA Y+ TS T GG+ NL P+N P P Sbjct: 431 DRVSVFEQIYTCNAW---QSSESRSGPGSTLERTGILRRELPPLLTRLGVRTLVDAPCGDCNWR--QHTAIDLDAYIGVDIVPALIEENRQRF-PHPNWRFEVADLVE----------DSLPRG-DAVLCRDALIHLSLADILRALSNI-RRSGAKYLLATSHEMTSANTDIAT-----GGWRSVNLTLAPFNLPPP 604
BLAST of NO16G00340 vs. NCBI_GenBank
Match: WP_107762824.1 (hypothetical protein [Nitrosospira multiformis] >PTQ79840.1 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Nitrosospira multiformis]) HSP 1 Score: 85.1 bits (209), Expect = 4.300e-13 Identity = 68/197 (34.52%), Postives = 86/197 (43.65%), Query Frame = 0 Query: 86 DVANRFTNIYKSADWGTSPSSHTRSGSGSTITGAFETITKLEPKFRELNITAIADVPSGDCGWQFALSTINAADAYFGGDITPHVAQENAQIFHNHLNKVFAFWDLVECPIPQWYTTCDSTPRPFDIVIVRDVIQHMRLNNAARAIKLIVEESGASYMAVTSFSTERCTDQCLTALQSDGGFYHNNLHCPPWNFPEP 283 D + F IY W SS +RSG GST+ +L P L + + D P GDC W+ T DAY G DI P + +EN + F H N F DLVE D PR D V+ RD + H+ L + RA+ I SGA Y+ TS T T GG+ NL P+N P P Sbjct: 431 DRVSVFEQIYTRNAW---QSSESRSGPGSTLERTEILRRELPPMLARLGVRTLVDAPCGDCNWR--QHTAIDLDAYIGVDIVPTLIEENRRRF-PHPNWRFELADLVE----------DDLPRG-DAVLCRDALIHLSLADILRALSNI-RRSGAKYLLATSHETISANTDVTT-----GGWRSVNLMLAPFNLPPP 604
BLAST of NO16G00340 vs. NCBI_GenBank
Match: XP_002297201.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED86526.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 84.0 bits (206), Expect = 9.700e-13 Identity = 47/135 (34.81%), Postives = 70/135 (51.85%), Query Frame = 0 Query: 92 TNIYKSADWGT-SPSSHTRSGSGSTITGAFETITK-LEPKFRELNITAIADVPSGDCGWQFALSTINAADAYFGGDITPHVAQENAQIFHNHLNKVFAFWDLVECPIPQWYTTCDSTPRPFDIVIVRDVIQHMRL 225 ++ Y A W T + + + SG GS + A ET K ++ + ++ ++ DVP GD W F + Y G D+T V N FH+H NK F+FWD EC +P++ F++V VRDVIQH+ L Sbjct: 77 SDFYSDAAWPTKAMRASSASGPGSNLGYATETSLKIIKDAIAKYHVQSMIDVPCGDVNWVFDSLETDTLPIYLGLDVTSAVIDVNNVRFHHHNNKFFSFWDATECVLPKFKNGTAVELSSFELVHVRDVIQHLTL 211
BLAST of NO16G00340 vs. NCBI_GenBank
Match: ODT78013.1 (hypothetical protein ABS69_08250 [Nitrosomonadales bacterium SCN 54-20]) HSP 1 Score: 82.4 bits (202), Expect = 2.800e-12 Identity = 66/197 (33.50%), Postives = 85/197 (43.15%), Query Frame = 0 Query: 86 DVANRFTNIYKSADWGTSPSSHTRSGSGSTITGAFETITKLEPKFRELNITAIADVPSGDCGWQFALSTINAADAYFGGDITPHVAQENAQIFHNHLNKVFAFWDLVECPIPQWYTTCDSTPRPFDIVIVRDVIQHMRLNNAARAIKLIVEESGASYMAVTSFSTERCTDQCLTALQSDGGFYHNNLHCPPWNFPEP 283 D + F IY W S +RSG GST+ +L P L + + D P GDC W+ T DAY G DI P + +EN + F H N F DLVE D PR D V+ RD + H+ + + RA+ I SGA Y+ TS T T GG+ NL P+N P P Sbjct: 431 DRVSVFEQIYARNAW---QSPESRSGPGSTLERTEILRRELPPLLARLGVRTLVDAPCGDCNWR--QHTAIDLDAYIGVDIVPALIEENRRRF-PHPNWRFEVADLVE----------DDLPRG-DAVLCRDALIHLSMADILRALSNI-RRSGAKYLLATSHETTSANTDIAT-----GGWRSVNLTLAPFNLPPP 604
BLAST of NO16G00340 vs. NCBI_GenBank
Match: WP_081363554.1 (hypothetical protein [Nitrosospira multiformis] >SFU57960.1 Glycosyltransferase Family 4 [Nitrosospira multiformis]) HSP 1 Score: 82.0 bits (201), Expect = 3.700e-12 Identity = 67/197 (34.01%), Postives = 84/197 (42.64%), Query Frame = 0 Query: 86 DVANRFTNIYKSADWGTSPSSHTRSGSGSTITGAFETITKLEPKFRELNITAIADVPSGDCGWQFALSTINAADAYFGGDITPHVAQENAQIFHNHLNKVFAFWDLVECPIPQWYTTCDSTPRPFDIVIVRDVIQHMRLNNAARAIKLIVEESGASYMAVTSFSTERCTDQCLTALQSDGGFYHNNLHCPPWNFPEP 283 D + F IY W SS +RSG GST+ +L P L + + D P GDC W+ T DAY G DI P + +EN + F H N F DLVE D PR D V+ RD + H+ L RA+ I SGA Y+ TS T GG+ NL P+N P P Sbjct: 431 DRVSVFEQIYARNAW---QSSESRSGPGSTLERTEILRQELPPLLARLGVRTLVDAPCGDCNWR--QHTAIDLDAYIGVDIVPALIEENRRRF-PHPNWRFELADLVE----------DDLPRG-DAVLCRDALIHLSLAEILRALSNI-RRSGAKYLLATSHEKISANTDVTT-----GGWRSVNLMLAPFNLPPP 604
BLAST of NO16G00340 vs. NCBI_GenBank
Match: WP_074744770.1 (methyltransferase domain-containing protein [Nitrosospira multiformis] >SEN21476.1 Methyltransferase domain-containing protein [Nitrosospira multiformis]) HSP 1 Score: 79.0 bits (193), Expect = 3.100e-11 Identity = 66/197 (33.50%), Postives = 84/197 (42.64%), Query Frame = 0 Query: 86 DVANRFTNIYKSADWGTSPSSHTRSGSGSTITGAFETITKLEPKFRELNITAIADVPSGDCGWQFALSTINAADAYFGGDITPHVAQENAQIFHNHLNKVFAFWDLVECPIPQWYTTCDSTPRPFDIVIVRDVIQHMRLNNAARAIKLIVEESGASYMAVTSFSTERCTDQCLTALQSDGGFYHNNLHCPPWNFPEP 283 D + F IY W S +RSG GS + +L P L + + D P GDC W+ T DAY G DI P + +EN + F H N F DLVE D PR D V+ RDV+ H+ L + RA+ I S A Y+ TS T T GG+ NL P+N P P Sbjct: 431 DRVSVFEQIYARNAW---QSPESRSGPGSMLERTGILRRELPPLLTRLGVRTLVDAPCGDCNWR--QHTAIDLDAYIGVDIVPALIEENRRRF-PHPNWRFEVADLVE----------DDLPRG-DAVLCRDVLIHLSLADILRALSNI-RRSRAKYLLATSHETTSINTDIAT-----GGWRSVNLTLAPFNLPPP 604 The following BLAST results are available for this feature:
BLAST of NO16G00340 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G00340 ID=NO16G00340|Name=NO16G00340|organism=Nannochloropsis oceanica|type=gene|length=975bpback to top protein sequence of NO16G00340.1 >NO16G00340.1-protein ID=NO16G00340.1-protein|Name=NO16G00340.1|organism=Nannochloropsis oceanica|type=polypeptide|length=325bpback to top Synonyms
Publications
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