NO16G00320, NO16G00320 (gene) Nannochloropsis oceanica

Overview
NameNO16G00320
Unique NameNO16G00320
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3004
Alignment locationchr16:118988..121991 +

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Properties
Property NameValue
DescriptionSerine/threonine protein kinase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:118988..121991 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR002912ACT_dom
Vocabulary: Biological Process
TermDefinition
GO:0016310phosphorylation
GO:0006468protein phosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
GO:0005524ATP binding
GO:0004674protein serine/threonine kinase activity
GO:0004672protein kinase activity
Homology
[Close]
BLAST of NO16G00320 vs. NCBI_GenBank
Match: XP_002905612.1 (serine/threonine protein kinase [Phytophthora infestans T30-4] >EEY68453.1 serine/threonine protein kinase [Phytophthora infestans T30-4])

HSP 1 Score: 86.3 bits (212), Expect = 3.400e-13
Identity = 51/130 (39.23%), Postives = 73/130 (56.15%), Query Frame = 0 
Query:  272 IQEHFARLPVRYALNVEAPEVVIDMGLMAQARADKDRATVDVQPSDWDNPEEARS--SITISCTDRPNLLDAITRIISALSSTIVDADCMTSRDGLTLDRFVVAHKDLAEAVEETKGQRLDPNALRKVLD 400
            +Q HF RLP RYAL+V   +V + M L+AQ + D     V+ Q    DN E   +   + +   DR N+LDAITR ++ +   I+DAD MT+ DG  LDRFVV    ++E  +E     ++ N LR  +D
Sbjct:  264 VQAHFRRLPARYALSVNPDDVPMHMRLLAQNQRDPTAIAVNAQLKKDDNGEIVPNVCEVVVVSLDRENILDAITRALTTMKGNILDADVMTTADGTLLDRFVVKGSFMSEERQEELRTNIEQNLLRLSMD 393
[Close]
BLAST of NO16G00320 vs. NCBI_GenBank
Match: OWZ14599.1 (TKL protein kinase [Phytophthora megakarya])

HSP 1 Score: 84.7 bits (208), Expect = 9.900e-13
Identity = 54/164 (32.93%), Postives = 87/164 (53.05%), Query Frame = 0 
Query:  272 IQEHFARLPVRYALNVEAPEVVIDMGLMAQARADKDRATVDVQPSDWDNPEEARS--SITISCTDRPNLLDAITRIISALSSTIVDADCMTSRDGLTLDRFVVAHKDLAEAVEETKGQRLDPNALRKVLD-------TALNRKGEEEEEAFIAQLSPSRLLRKS 427
            +Q HF RLP RYAL+V   +V + M L+AQ + D     V+ Q    DN E   +   + +   DR N+LDAITR ++ +   I+DAD MT+ DG  LDRFVV    +++  ++     ++ N LR  +D       ++L   G+ E  +   +L   +++ K+
Sbjct:  255 VQAHFRRLPARYALSVNPDDVPMHMRLLAQNQRDPTAIAVNAQLKKDDNGEIVPNVCEVVVVSLDRENILDAITRALTTMKGNILDADVMTTADGTLLDRFVVKGSFMSDERQDELRTNIEQNLLRLSMDEDARPSVSSLQESGDTENVSLAEKLGVLQMVDKN 418
[Close]
BLAST of NO16G00320 vs. NCBI_GenBank
Match: POM61832.1 (TKL protein kinase, partial [Phytophthora palmivora var. palmivora])

HSP 1 Score: 84.3 bits (207), Expect = 1.300e-12
Identity = 55/161 (34.16%), Postives = 84/161 (52.17%), Query Frame = 0 
Query:  275 HFARLPVRYALNVEAPEVVIDMGLMAQARADKDRATVDVQPSDWDNPEEARS--SITISCTDRPNLLDAITRIISALSSTIVDADCMTSRDGLTLDRFVVAHKDLAEAVEETKGQRLDPNALRKVLD-------TALNRKGEEEEEAFIAQLSPSRLLRKS 427
            HF RLP RYAL+V   +V + M L+AQ + D     V+ Q    DN E   +   + +   DR N+LDAITR ++ +   I+DAD MT+ DG  LDRFVV    +++  +E     ++ N LR  +D       T+L   G  E  +   +L   +++ K+
Sbjct:  304 HFRRLPARYALSVNPDDVPLHMRLLAQNQRDPTAIAVNAQLKKDDNGEIVPNVCEVVVVSLDRENILDAITRALTTMKGNILDADVMTTADGTLLDRFVVKGSFMSDERQEELRTNIEQNLLRLSMDEDTRPSITSLQESGGNESVSLAEKLGVLQMVDKN 464
[Close]
BLAST of NO16G00320 vs. NCBI_GenBank
Match: XP_008895162.1 (TKL protein kinase [Phytophthora parasitica INRA-310] >ETI38731.1 TKL protein kinase [Phytophthora parasitica P1569] >ETL32378.1 TKL protein kinase [Phytophthora parasitica] >ETM38774.1 TKL protein kinase [Phytophthora parasitica] >ETN19301.1 TKL protein kinase [Phytophthora parasitica INRA-310] >ETP36680.1 TKL protein kinase [Phytophthora parasitica P10297])

HSP 1 Score: 82.4 bits (202), Expect = 4.900e-12
Identity = 49/126 (38.89%), Postives = 70/126 (55.56%), Query Frame = 0 
Query:  272 IQEHFARLPVRYALNVEAPEVVIDMGLMAQARADKDRATVDVQPSDWDNPEEARS--SITISCTDRPNLLDAITRIISALSSTIVDADCMTSRDGLTLDRFVVAHKDLAEAVEETKGQRLDPNALR 396
            +Q HF RLP RYAL+V   +V + M L+AQ + D     V+ Q    DN E   +   + +   DR N+LDAITR ++ +   I+DAD MT+ DG  LDRFVV    ++E  +E     ++ N  R
Sbjct:  257 VQAHFRRLPARYALSVNPDDVPMHMRLLAQNQRDPTAIAVNAQLKKDDNGEIVPNVCEVVVVSLDRENILDAITRALTTMKGNILDADVMTTSDGTLLDRFVVKGSFMSEERQEELRTNIEQNLRR 382
[Close]
BLAST of NO16G00320 vs. NCBI_GenBank
Match: ETK78947.1 (TKL protein kinase [Phytophthora parasitica] >ETL85620.1 TKL protein kinase [Phytophthora parasitica] >ETP08643.1 TKL protein kinase [Phytophthora parasitica CJ01A1])

HSP 1 Score: 82.4 bits (202), Expect = 4.900e-12
Identity = 49/126 (38.89%), Postives = 70/126 (55.56%), Query Frame = 0 
Query:  272 IQEHFARLPVRYALNVEAPEVVIDMGLMAQARADKDRATVDVQPSDWDNPEEARS--SITISCTDRPNLLDAITRIISALSSTIVDADCMTSRDGLTLDRFVVAHKDLAEAVEETKGQRLDPNALR 396
            +Q HF RLP RYAL+V   +V + M L+AQ + D     V+ Q    DN E   +   + +   DR N+LDAITR ++ +   I+DAD MT+ DG  LDRFVV    ++E  +E     ++ N  R
Sbjct:  257 VQAHFRRLPARYALSVNPDDVPMHMRLLAQNQRDPTAIAVNAQLKKDDNGEIVPNVCEVVVVSLDRENILDAITRALTTMKGNILDADVMTTSDGTLLDRFVVKGSFMSEERQEELRTNIEQNLRR 382
[Close]
BLAST of NO16G00320 vs. NCBI_GenBank
Match: ETO67527.1 (TKL protein kinase [Phytophthora parasitica P1976])

HSP 1 Score: 82.4 bits (202), Expect = 4.900e-12
Identity = 49/126 (38.89%), Postives = 70/126 (55.56%), Query Frame = 0 
Query:  272 IQEHFARLPVRYALNVEAPEVVIDMGLMAQARADKDRATVDVQPSDWDNPEEARS--SITISCTDRPNLLDAITRIISALSSTIVDADCMTSRDGLTLDRFVVAHKDLAEAVEETKGQRLDPNALR 396
            +Q HF RLP RYAL+V   +V + M L+AQ + D     V+ Q    DN E   +   + +   DR N+LDAITR ++ +   I+DAD MT+ DG  LDRFVV    ++E  +E     ++ N  R
Sbjct:  257 VQAHFRRLPARYALSVNPDDVPMHMRLLAQNQRDPTAIAVNAQLKKDDNGEIVPNVCEVVVVSLDRENILDAITRALTTMKGNILDADVMTTSDGTLLDRFVVKGSFMSEERQEELRTNIEQNLRR 382
[Close]
BLAST of NO16G00320 vs. NCBI_GenBank
Match: KUF80380.1 (serine/threonine-protein kinase [Phytophthora nicotianae])

HSP 1 Score: 82.4 bits (202), Expect = 4.900e-12
Identity = 49/126 (38.89%), Postives = 70/126 (55.56%), Query Frame = 0 
Query:  272 IQEHFARLPVRYALNVEAPEVVIDMGLMAQARADKDRATVDVQPSDWDNPEEARS--SITISCTDRPNLLDAITRIISALSSTIVDADCMTSRDGLTLDRFVVAHKDLAEAVEETKGQRLDPNALR 396
            +Q HF RLP RYAL+V   +V + M L+AQ + D     V+ Q    DN E   +   + +   DR N+LDAITR ++ +   I+DAD MT+ DG  LDRFVV    ++E  +E     ++ N  R
Sbjct:  170 VQAHFRRLPARYALSVNPDDVPMHMRLLAQNQRDPTAIAVNAQLKKDDNGEIVPNVCEVVVVSLDRENILDAITRALTTMKGNILDADVMTTSDGTLLDRFVVKGSFMSEERQEELRTNIEQNLRR 295
[Close]
BLAST of NO16G00320 vs. NCBI_GenBank
Match: KUF94474.1 (Alcohol dehydrogenase 3 [Phytophthora nicotianae])

HSP 1 Score: 82.4 bits (202), Expect = 4.900e-12
Identity = 49/126 (38.89%), Postives = 70/126 (55.56%), Query Frame = 0 
Query:  272 IQEHFARLPVRYALNVEAPEVVIDMGLMAQARADKDRATVDVQPSDWDNPEEARS--SITISCTDRPNLLDAITRIISALSSTIVDADCMTSRDGLTLDRFVVAHKDLAEAVEETKGQRLDPNALR 396
            +Q HF RLP RYAL+V   +V + M L+AQ + D     V+ Q    DN E   +   + +   DR N+LDAITR ++ +   I+DAD MT+ DG  LDRFVV    ++E  +E     ++ N  R
Sbjct:  226 VQAHFRRLPARYALSVNPDDVPMHMRLLAQNQRDPTAIAVNAQLKKDDNGEIVPNVCEVVVVSLDRENILDAITRALTTMKGNILDADVMTTSDGTLLDRFVVKGSFMSEERQEELRTNIEQNLRR 351
[Close]
BLAST of NO16G00320 vs. NCBI_GenBank
Match: XP_009539433.1 (hypothetical protein PHYSODRAFT_248565 [Phytophthora sojae] >EGZ05061.1 hypothetical protein PHYSODRAFT_248565 [Phytophthora sojae])

HSP 1 Score: 79.7 bits (195), Expect = 3.200e-11
Identity = 47/130 (36.15%), Postives = 72/130 (55.38%), Query Frame = 0 
Query:  272 IQEHFARLPVRYALNVEAPEVVIDMGLMAQARADKDRATVDVQPSDWDNPEEARS--SITISCTDRPNLLDAITRIISALSSTIVDADCMTSRDGLTLDRFVVAHKDLAEAVEETKGQRLDPNALRKVLD 400
            +Q HF RLP RYAL+V   +V + M L+++ + D     V+ Q    DN E   +   + +   DR N+LDAITR ++ +   I+DAD MT+ DG  LDRFVV    +++  +E     ++ N  R  +D
Sbjct:  260 VQAHFRRLPARYALSVNPDDVPLHMRLLSKNQRDPTAIAVNAQLKKDDNGEIVPNVCEVVVVSLDRENILDAITRALTMMKGNILDADVMTTADGTLLDRFVVKGSFMSDERQEELRSLIEQNLRRLSMD 389
[Close]
BLAST of NO16G00320 vs. NCBI_GenBank
Match: XP_024586790.1 (tkl protein kinase [Plasmopara halstedii] >CEG50421.1 tkl protein kinase [Plasmopara halstedii])

HSP 1 Score: 79.7 bits (195), Expect = 3.200e-11
Identity = 45/103 (43.69%), Postives = 62/103 (60.19%), Query Frame = 0 
Query:  272 IQEHFARLPVRYALNVEAPEVVIDMGLMAQARADKDRATVDVQPSDWDNPEEARS--SITISCTDRPNLLDAITRIISALSSTIVDADCMTSRDGLTLDRFVV 373
            +Q HF RLP RYAL+V   +V + M L+A+ + D     V+ Q    DN E   +   + +   DR N+LDAITR ++A+   I+DAD MT+ DG  LDRFVV
Sbjct:  276 VQAHFRRLPARYALSVNPDDVPLHMRLLAKNQRDPTAIAVNAQLKKDDNGEIVANVCEVVVVSLDRDNMLDAITRALTAMKGNILDADVMTTSDGTLLDRFVV 378
The following BLAST results are available for this feature:
BLAST of NO16G00320 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002905612.13.400e-1339.23serine/threonine protein kinase [Phytophthora infe... [more]
OWZ14599.19.900e-1332.93TKL protein kinase [Phytophthora megakarya][more]
POM61832.11.300e-1234.16TKL protein kinase, partial [Phytophthora palmivor... [more]
XP_008895162.14.900e-1238.89TKL protein kinase [Phytophthora parasitica INRA-3... [more]
ETK78947.14.900e-1238.89TKL protein kinase [Phytophthora parasitica] >ETL8... [more]
ETO67527.14.900e-1238.89TKL protein kinase [Phytophthora parasitica P1976][more]
KUF80380.14.900e-1238.89serine/threonine-protein kinase [Phytophthora nico... [more]
KUF94474.14.900e-1238.89Alcohol dehydrogenase 3 [Phytophthora nicotianae][more]
XP_009539433.13.200e-1136.15hypothetical protein PHYSODRAFT_248565 [Phytophtho... [more]
XP_024586790.13.200e-1143.69tkl protein kinase [Plasmopara halstedii] >CEG5042... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR018ncniR018Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G00320.1NO16G00320.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G00320.1NO16G00320.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G00320 ID=NO16G00320|Name=NO16G00320|organism=Nannochloropsis oceanica|type=gene|length=3004bp
ATGTGGAACGGAGGTCGGCGTACCTCCTCGGTGGACGAGACGGTGCCCGC
CTCCATCAAGGGCAGCAAAAGCGGCAACAGCGACAAACTTTCCTCCTCCC
CTTCTCCCTCCCCCCCATGCATCGGCGAACGGGGAGGAGGGAGGGGGGGA
GCCGGTGGGAACGCGAGCACCACAAGCACCAGCACCACGGACAGTGACAG
CAGCATCGGCAGTGCCGGCAACGACAAGGGCGCACAAGCAGGGAGAGAAG
CAGGCACAGGAGCCAAGGCAAGAACGGGAGCAGGAGCTGTAGCAAATGCA
GGAGCAGGCCCCATTTTCCCTACCTTGACTCGCAGATGGACATTCAGTGT
AGCCAGCAAGGAAGGAGGAGGAGAGGGCGTCTGCGGCTTTTTGGGAGGGG
AAGGGAAGGGAGGGGGGGGGAAGACTGAAACAGTACTCCCCCCTCCCTCC
CTCGTCAAGCACGGCCCGCCTCATTCGTCATCTTTCCAGCCAGCTCCACC
AGCAGCAGCAGCACCACCACCACCATCACCGCCACCCCCACTCCCCTCCA
CATTCCACGCACCACACAGACCAGCGTCAGCAGGCCCCGGGGGAAACAGT
GCGGAGAAAGGGGACAGgtagggagggaggaagggagggagagagagagg
gcagaggggaggaagggaaggagggagggaaggagggagggcaagaggga
gggcaggaagaaaacctgcaaaaataatcctcttctctcttacatataca
caatgtggtcttctccgaaactcacgaccctccccccctccccccctccc
tccctccctccctcccgctttggggacagcagTGGCGCAAAGCGGCAGTT
GCACAAGGCCTCCGTGGCTCAAGAGCTCCTAGAAGCTGCCGTCCATCTCC
TGGTGGAGAGGAATGCGTCAGAACGAGGAGGAGGGAGAGGAGGCGTAGGA
GGCGTAGGAGGAGGCGCGGGTGGTGTGCTGTTGAGGGGGGAAACGGAGgt
aggagatggcgtggagggagggagggagggagggagggagggagagaggg
agagagggagggagggagggagggagggagggagggagggagggagggag
tgagggagggagggagggagggagggagggagggagggagggagggaggg
gaggaaggggcttgcgatacggtctccttgtcgagaggagtagctccttg
ttcaccgtccgtgccctccctctctccctccctccctccctccctccctc
cctatcgaagGCGGAACAGCTCGCGGATGCCCGCCGTCAGATCCAGGAGC
ATTTTGCACGTCTCCCCGTGCGATACGCACTTAATGTGGAGGCACCGGAG
GTGGTGATAGACATGGGCCTCATGGCTCAGGCCAGGGCAGATAAGGACCG
gtagggagggagggagggagggagggagggagggagggatagggagggag
ggagggatagcgagggggaggagggaaggggtgcatcacattgcctgctt
tccatcttcaaattcatccacgccccccccctccctccctctctccttca
gggcgactttccacacttcaaactcatccccctccctccctctttccctc
cctccctcccccagGGCGACGGTGGACGTGCAGCCGTCCGATTGGGACAA
CCCGGAAGAGGCTCGGTCGAGCATCACTATCTCCTGCACCGACAGACCAA
ACCTTCTGGATGCCATCACGAGGATCATCAGCGCCTTGTCCTCCACCATC
GTGGACGCCGACTGCATGACATCAAGgtagggagggcgggtgggctggcg
ggagggaggaagggaggggaggagggccgtgtgggaagtcatgcagttga
tgcctccgatcgcggaggaggtgtgaaccttcccgtcaccccaacatgtc
ctttcccttctcctcacctgctcctccctccctccctccttccctccctc
cctccctccctccatcctccccctcctctcccagGGACGGTTTAACGCTC
GACCGTTTCGTGGTGGCCCATAAAGACCTGGCAGAGGCCGTTGAGGAGAC
CAAGGGGCAACGGCTCGATCCCAACGCCCTCCGCAAGgtagcccctccct
ccctccttcccttcttcgttcgttcaactaccgtcctctcttgtttttga
agccactgtctttctccctgcctccctcctccttccctccttccctccac
gtcctcgatgcggcgtccaaccgggataaagacagcacaagcgctcactt
cccacctccccctcccttcctccctccctccctccctccagGTGCTCGAC
ACGGCGTTGAATCGCAAGGGCGAGGAGGAGGAAGAAGCCTTCATCGCCCA
GCTCTCTCCTTCCCGGCTTCTGCGGAAGAGCGGGAGTGGTAGCACGTCCA
AAACGGCCTCGACAAgtagggagggggggagggagggaggggaggagggg
gagggagggcgggcgacacagcttgcctgggaaggcgattgcgttttgtt
tgtacatccgttggcccatcgacccacgcactcttccctccccccctccc
tccctccctccctccctcccttcctccctccctccctccctcccttcctt
cttccccagGCGACGGCTTCTGGCTCCATCGCACCTCCCCTCCTACCTCC
TCCACGGCCTCCCCCTCCCTCCCGGCCGAAGAAAACCCGCCGTTCCCGTC
CTCCTCCTCCTCCTCCTCACCGAGAGGGAGGGAGGAAAGGAGGGAAGCGA
GAATCCCTCCACCTGCTCCTCGCCTGGGCGCGATGGGGAATGGGGGGGGT
CCGAGAAGAGGGGAGGAGGACGCAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGAAGAAGAAGAAGAAGAAGAAGGAAGCGGCGGGGGGGAAGAAGAGAAGG
AAGGGAAGAAGGGACCGAGGGAGGGACCGAGGGAGGGGCCCAGGGAGGGG
CGGGAAAAGCCAAGAAGGACGACATGTTCATTCCCTTTGCGGAGATCGAA
TTGA
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protein sequence of NO16G00320.1

>NO16G00320.1-protein ID=NO16G00320.1-protein|Name=NO16G00320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=569bp
MWNGGRRTSSVDETVPASIKGSKSGNSDKLSSSPSPSPPCIGERGGGRGG
AGGNASTTSTSTTDSDSSIGSAGNDKGAQAGREAGTGAKARTGAGAVANA
GAGPIFPTLTRRWTFSVASKEGGGEGVCGFLGGEGKGGGGKTETVLPPPS
LVKHGPPHSSSFQPAPPAAAAPPPPSPPPPLPSTFHAPHRPASAGPGGNS
AEKGDSGAKRQLHKASVAQELLEAAVHLLVERNASERGGGRGGVGGVGGG
AGGVLLRGETEAEQLADARRQIQEHFARLPVRYALNVEAPEVVIDMGLMA
QARADKDRATVDVQPSDWDNPEEARSSITISCTDRPNLLDAITRIISALS
STIVDADCMTSRDGLTLDRFVVAHKDLAEAVEETKGQRLDPNALRKVLDT
ALNRKGEEEEEAFIAQLSPSRLLRKSGSGSTSKTASTSDGFWLHRTSPPT
SSTASPSLPAEENPPFPSSSSSSSPRGREERREARIPPPAPRLGAMGNGG
GPRRGEEDAGGGGGGGGGEEEEEEEGSGGGEEEKEGKKGPREGPREGPRE
GREKPRRTTCSFPLRRSN*
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Synonyms
Publications